Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

26862373 .. 26868889

Gene Structure 6517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG262300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGATCAGAGTTCTAATGCCCCTATGCATCTCTGCCATGTCAACAAGCTCACAATCTTTATTAATCGAACGTATACAGTCATATATTCCGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTCCATGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTCTCTTCTTTCGAGTGGCTTCTAATCCAGGCATATCGGTGGAGGCCAGTCTCTCGAACTGTGTTCCCGGAGAGATTGCCGGAAGATGACAGACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCTGATCTGGAGCCAACCGTGGCGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTGATGTGACCCTAAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAACATCAAGTGCAGATCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGAGAATGAAGATGGTGCTTTGGGGGTTACTGATTTCATACAAGAGAGGCAAATTATTCAGGAAAAATATGAGGTGTTTAAGGAAAGAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTCGAGATCATTCTGCAGTGATTGAGGTGATACAAGAAAGTTCTAGTAATCATGCATTTGAAGAGAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAAAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTTCTTCGGGTATCCGGTGTGATCAGTAATTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACACTAGCACTTGTGCAATTCCCTCATAAATTCCACAACATCAGTAAGAATGACATCTACGACAGTCAGATGAGAGAGGTGTTTTCGGTGCTATATCAAGGTTTTGATGGACTTCAAGGGCCATGCTTATCCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAAGATCATAAGGATCTTTTGGAACTTAGACAATATGTTGGTCCTTCGAATGAGTTCGTAAAATCCCTGCTTGGAAACTACAATCCTAATATGGAAATGGCACAGCTAGCTGAGACCCAACAGCTAGCCTCTTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGTGGAAGATTATTTCACCGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCGAGGCCTCAGTTCTTGGGCAGTGGCACCACTAATTTGAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGGGTTGGTTGATGTTGCCATCTCCAAATACTGCCCTCTTATATATGGCCTTTCTAAAATGTCTTTCCCTGAAAGTATGTGCTATGCATGGATAGCAATTTCCCCTATTTGCCGGTTCTTCTCAGCCTGGTGCCTTGCAACTATACCTCAGCTTTGCCTAGTCAACGGCATTTCCCTGTACCCTGAGGTCTCAAATTCCTTTTTTTGGATATTTTCTTTTGTATTCCTCTTGTCTGTTTTGAGACAATTATACGAGGTCCTCACAACGGAAGCGTCATTACAACATTGGATAAACGAGCAAAGAATATGGATGATGAAAGCAGTTACATCTCACTTATATGGTAGTCTTGATGCTTTTATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCTAACAAATAAAGTTGATGATGTTGAGCAACTCAAGCGTTACAACGCGGGGGTATTTGATTTCCAAACCTCACCACATTTTCTTGTTCCATTGGCTTCACTGGTTATCTTGAACATGGCCTCCCTTTGTGTGGGCATTGCCAGAGTAATATTTCTGGGGGAATTAGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCGTCAATTACCCTATAATAGAAGGAATGCTAGTAAGGAAAGATAGTGGTCGCATTCCACAATCAGTCACCCTATTGTCTGCTACAGCTTCAATCATTTTCTGCGTTTTGGGTTCAGTTATTGTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

739

Amino Acids

83.86

Weight (kDa)

6.01

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 386	5.2e-79	Cellulose synthase
Cellulose_synt	PF03552	391 - 733	7.4e-54	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1463
AccB1I	GGYRCC	3 cut(s)	1301, 1439, 1617
AccI	GTMKAC	2 cut(s)	74, 294
AccII	CGCG	3 cut(s)	789, 1337, 1928
AciI	CCGC	7 cut(s)	179, 312, 341, 420, 472, 1928, 2084
AclWI	GGATC	5 cut(s)	12, 311, 908, 947, 1173
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	4 cut(s)	998, 1393, 1681, 1853
AcvI	CACGTG	1 cut(s)	400
AfaI	GTAC	3 cut(s)	1105, 1288, 1667
AfiI	CCNNNNNNNGG	3 cut(s)	1692, 1753, 2011
AflIII	ACRYGT	4 cut(s)	297, 399, 900, 1335
AgsI	TTSAA	6 cut(s)	743, 820, 1085, 1453, 1993, 2181
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	216, 1613
AjuI	GAANNNNNNNTTGG	2 cut(s)	1445, 1477
AloI	GAACNNNNNNTCC	2 cut(s)	1985, 2017
Alw21I	GWGCWC	2 cut(s)	189, 832
Alw26I	GTCTC	6 cut(s)	196, 244, 787, 1259, 1681, 1723
AlwI	GGATC	5 cut(s)	12, 311, 908, 947, 1173
Ama87I	CYCGRG	1 cut(s)	386
AoxI	GGCC	6 cut(s)	180, 233, 1088, 1418, 1534, 1998
ApeKI	GCWGC	1 cut(s)	536
ApoI	RAATTY	4 cut(s)	998, 1393, 1681, 1853
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	1 cut(s)	1205
AspS9I	GGNCC	4 cut(s)	1088, 1193, 1465, 1744
AsuC2I	CCSGG	2 cut(s)	257, 1363
AsuHPI	GGTGA	8 cut(s)	355, 674, 721, 957, 1325, 1351, 1944, 2149
AsuII	TTCGAA	1 cut(s)	1199
AsuNHI	GCTAGC	3 cut(s)	1258, 1276, 1370
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	1193, 1465, 1744
AxyI	CCTNAGG	1 cut(s)	1671
BanI	GGYRCC	3 cut(s)	1301, 1439, 1617
BanII	GRGCYC	2 cut(s)	189, 832
BarI	GAAGNNNNNNTAC	2 cut(s)	1749, 1781
BbrPI	CACGTG	1 cut(s)	400
BbsI	GAAGAC	1 cut(s)	2059
Bbv12I	GWGCWC	2 cut(s)	189, 832
BbvCI	CCTCAGC	1 cut(s)	1635
BbvI	GCAGC	1 cut(s)	548
BccI	CCATC	9 cut(s)	161, 169, 410, 557, 819, 1070, 1292, 1473, 1514
BceAI	ACGGC	1 cut(s)	1669
BciT130I	CCWGG	2 cut(s)	218, 1615
BciVI	GTATCC	1 cut(s)	862
BclI	TGATCA	1 cut(s)	861
BcnI	CCSGG	2 cut(s)	257, 1363
BcoDI	GTCTC	6 cut(s)	196, 244, 787, 1259, 1681, 1723
BfaI	CTAG	7 cut(s)	726, 974, 1259, 1277, 1371, 1646, 2120
BfmI	CTRYAG	5 cut(s)	115, 288, 696, 1341, 2172
BfuI	GTATCC	1 cut(s)	862
BglII	AGATCT	1 cut(s)	512
BisI	GCNGC	2 cut(s)	180, 537
BlsI	GCNGC	2 cut(s)	181, 538
Bme1390I	CCNGG	4 cut(s)	218, 257, 1363, 1615
Bme18I	GGWCC	3 cut(s)	1193, 1465, 1744
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	4 cut(s)	1088, 1193, 1465, 1744
BmiI	GGNNCC	4 cut(s)	330, 1303, 1441, 1619
BmrFI	CCNGG	4 cut(s)	218, 257, 1363, 1615
BmrI	ACTGGG	1 cut(s)	678
BmsI	GCATC	2 cut(s)	37, 1828
BmtI	GCTAGC	3 cut(s)	1262, 1280, 1374
BmuI	ACTGGG	1 cut(s)	678
BpiI	GAAGAC	1 cut(s)	2059
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	2 cut(s)	347, 846
Bpu10I	CCTNAGC	1 cut(s)	1635
Bpu14I	TTCGAA	1 cut(s)	1199
BpuEI	CTTGAG	1 cut(s)	1898
BpuMI	CCSGG	2 cut(s)	257, 1363
BsaAI	YACGTR	1 cut(s)	400
BsaBI	GATNNNNATC	1 cut(s)	321
BsaI	GGTCTC	2 cut(s)	1259, 1681
BsaJI	CCNNGG	4 cut(s)	336, 366, 1415, 1468
BsaWI	WCCGGW	2 cut(s)	854, 1100
BsaXI	ACNNNNNCTCC	2 cut(s)	1985, 2015
Bsc4I	CCNNNNNNNGG	3 cut(s)	1692, 1753, 2011
Bse118I	RCCGGY	1 cut(s)	1599
Bse1I	ACTGG	4 cut(s)	236, 673, 1111, 1986
Bse21I	CCTNAGG	1 cut(s)	1671
Bse3DI	GCAATG	4 cut(s)	916, 942, 1378, 2016
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	218, 1615
BseDI	CCNNGG	4 cut(s)	336, 366, 1415, 1468
BseGI	GGATG	2 cut(s)	550, 1803
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	3 cut(s)	1692, 1753, 2011
BseMI	GCAATG	4 cut(s)	916, 942, 1378, 2016
BseMII	CTCAG	6 cut(s)	546, 1254, 1436, 1623, 1649, 1662
BseNI	ACTGG	4 cut(s)	236, 673, 1111, 1986
BseX3I	CGGCCG	1 cut(s)	180
BseXI	GCAGC	1 cut(s)	548
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	3 cut(s)	789, 1337, 1928
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	6 cut(s)	182, 235, 1090, 1420, 1536, 2000
BshNI	GGYRCC	3 cut(s)	1301, 1439, 1617
BsiEI	CGRYCG	1 cut(s)	183
BsiHKAI	GWGCWC	2 cut(s)	189, 832
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	6 cut(s)	257, 269, 855, 1101, 1362, 1600
BslFI	GGGAC	1 cut(s)	1486
BslI	CCNNNNNNNGG	3 cut(s)	1692, 1753, 2011
BsmAI	GTCTC	6 cut(s)	196, 244, 787, 1259, 1681, 1723
BsmBI	CGTCTC	1 cut(s)	196
BsmFI	GGGAC	1 cut(s)	1486
BsmI	GAATGC	2 cut(s)	2121, 2142
BsnI	GGCC	6 cut(s)	182, 235, 1090, 1420, 1536, 2000
Bso31I	GGTCTC	2 cut(s)	1259, 1681
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	1199
Bsp1286I	GDGCHC	2 cut(s)	189, 832
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	789
BspACI	CCGC	7 cut(s)	179, 312, 341, 420, 472, 1928, 2084
BspANI	GGCC	6 cut(s)	182, 235, 1090, 1420, 1536, 2000
BspCNI	CTCAG	6 cut(s)	545, 1255, 1435, 1622, 1648, 1663
BspFNI	CGCG	3 cut(s)	789, 1337, 1928
BspLI	GGNNCC	4 cut(s)	330, 1303, 1441, 1619
BspMAI	CTGCAG	2 cut(s)	292, 700
BspOI	GCTAGC	3 cut(s)	1262, 1280, 1374
BspPI	GGATC	5 cut(s)	12, 311, 908, 947, 1173
BspT104I	TTCGAA	1 cut(s)	1199
BspT107I	GGYRCC	3 cut(s)	1301, 1439, 1617
BspTNI	GGTCTC	2 cut(s)	1259, 1681
BsrDI	GCAATG	4 cut(s)	916, 942, 1378, 2016
BsrFI	RCCGGY	1 cut(s)	1599
BsrI	ACTGG	4 cut(s)	236, 673, 1111, 1986
BssAI	RCCGGY	1 cut(s)	1599
BssECI	CCNNGG	4 cut(s)	336, 366, 1415, 1468
BssNAI	GTATAC	1 cut(s)	75
BssT1I	CCWWGG	2 cut(s)	366, 1468
Bst1107I	GTATAC	1 cut(s)	75
Bst2UI	CCWGG	2 cut(s)	218, 1615
Bst4CI	ACNGT	5 cut(s)	79, 250, 337, 355, 1034
Bst6I	CTCTTC	3 cut(s)	199, 738, 1311
BstBAI	YACGTR	1 cut(s)	400
BstBI	TTCGAA	1 cut(s)	1199
BstC8I	GCNNGC	5 cut(s)	933, 1260, 1278, 1372, 1376
BstDEI	CTNAG	7 cut(s)	532, 1178, 1263, 1422, 1609, 1635, 1671
BstDSI	CCRYGG	2 cut(s)	336, 366
BstF5I	GGATG	2 cut(s)	550, 1803
BstFNI	CGCG	3 cut(s)	789, 1337, 1928
BstMAI	GTCTC	6 cut(s)	196, 244, 787, 1259, 1681, 1723
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	5 cut(s)	932, 1259, 1380, 1580, 1915
BstNI	CCWGG	2 cut(s)	218, 1615
BstNSI	RCATGY	2 cut(s)	766, 904
BstSCI	CCNGG	4 cut(s)	216, 255, 1361, 1613
BstSFI	CTRYAG	5 cut(s)	115, 288, 696, 1341, 2172
BstUI	CGCG	3 cut(s)	789, 1337, 1928
BstV1I	GCAGC	1 cut(s)	548
BstV2I	GAAGAC	1 cut(s)	2059
BstX2I	RGATCY	2 cut(s)	512, 1165
BstYI	RGATCY	2 cut(s)	512, 1165
BstZ17I	GTATAC	1 cut(s)	75
BstZI	CGGCCG	1 cut(s)	180
Bsu36I	CCTNAGG	1 cut(s)	1671
BsuI	GTATCC	1 cut(s)	862
BsuRI	GGCC	6 cut(s)	182, 235, 1090, 1420, 1536, 2000
BtgI	CCRYGG	2 cut(s)	336, 366
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	2 cut(s)	550, 1803
BtsI	GCAGTG	2 cut(s)	705, 1441
BtsIMutI	CAGTG	6 cut(s)	351, 666, 705, 1404, 1441, 1979
BtuMI	TCGCGA	1 cut(s)	789
Cac8I	GCNNGC	5 cut(s)	933, 1260, 1278, 1372, 1376
Cfr10I	RCCGGY	1 cut(s)	1599
Cfr13I	GGNCC	4 cut(s)	1088, 1193, 1465, 1744
CseI	GACGC	3 cut(s)	671, 1326, 1749
Csp6I	GTAC	3 cut(s)	1104, 1287, 1666
CviQI	GTAC	3 cut(s)	1104, 1287, 1666
DdeI	CTNAG	7 cut(s)	532, 1178, 1263, 1422, 1609, 1635, 1671
DrdI	GACNNNNNNGTC	1 cut(s)	1463
DseDI	GACNNNNNNGTC	1 cut(s)	1463
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	3 cut(s)	199, 738, 1311
EarI	CTCTTC	3 cut(s)	199, 738, 1311
Ecl136II	GAGCTC	2 cut(s)	187, 830
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	2 cut(s)	366, 1468
Eco147I	AGGCCT	1 cut(s)	1420
Eco24I	GRGCYC	2 cut(s)	189, 832
Eco31I	GGTCTC	2 cut(s)	1259, 1681
Eco47I	GGWCC	3 cut(s)	1193, 1465, 1744
Eco52I	CGGCCG	1 cut(s)	180
Eco53kI	GAGCTC	2 cut(s)	187, 830
Eco72I	CACGTG	1 cut(s)	400
Eco81I	CCTNAGG	1 cut(s)	1671
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	2 cut(s)	187, 830
EcoO109I	RGGNCCY	1 cut(s)	1744
EcoRI	GAATTC	1 cut(s)	1393
EcoRII	CCWGG	2 cut(s)	216, 1613
EcoT14I	CCWWGG	2 cut(s)	366, 1468
EcoT22I	ATGCAT	3 cut(s)	30, 739, 1576
EcoT38I	GRGCYC	2 cut(s)	189, 832
ErhI	CCWWGG	2 cut(s)	366, 1468
Esp3I	CGTCTC	1 cut(s)	196
FaqI	GGGAC	1 cut(s)	1486
FauI	CCCGC	1 cut(s)	1921
FbaI	TGATCA	1 cut(s)	861
FblI	GTMKAC	2 cut(s)	74, 294
Fnu4HI	GCNGC	2 cut(s)	180, 537
FokI	GGATG	2 cut(s)	557, 1810
FriOI	GRGCYC	2 cut(s)	189, 832
Fsp4HI	GCNGC	2 cut(s)	180, 537
FspBI	CTAG	7 cut(s)	726, 974, 1259, 1277, 1371, 1646, 2120
GluI	GCNGC	2 cut(s)	180, 537
GsuI	CTGGAG	2 cut(s)	347, 846
HaeIII	GGCC	6 cut(s)	182, 235, 1090, 1420, 1536, 2000
HapII	CCGG	6 cut(s)	257, 269, 855, 1101, 1362, 1600
HgaI	GACGC	3 cut(s)	671, 1326, 1749
HincII	GTYRAC	3 cut(s)	43, 295, 1651
HindII	GTYRAC	3 cut(s)	43, 295, 1651
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	1 cut(s)	478
HpaII	CCGG	6 cut(s)	257, 269, 855, 1101, 1362, 1600
HphI	GGTGA	8 cut(s)	355, 674, 721, 957, 1325, 1351, 1944, 2149
Hpy166II	GTNNAC	4 cut(s)	43, 75, 295, 1651
Hpy188I	TCNGA	3 cut(s)	9, 412, 1038
Hpy188III	TCNNGA	9 cut(s)	243, 320, 326, 611, 686, 788, 1120, 1835, 1990
Hpy8I	GTNNAC	4 cut(s)	43, 75, 295, 1651
Hpy99I	CGWCG	3 cut(s)	95, 299, 687
HpyAV	CCTTC	4 cut(s)	810, 886, 1206, 2105
HpyCH4III	ACNGT	5 cut(s)	79, 250, 337, 355, 1034
HpyCH4IV	ACGT	4 cut(s)	71, 297, 399, 461
HpyF10VI	GCNNNNNNNGC	5 cut(s)	932, 1259, 1380, 1580, 1915
HpyF3I	CTNAG	7 cut(s)	532, 1178, 1263, 1422, 1609, 1635, 1671
HpySE526I	ACGT	4 cut(s)	71, 297, 399, 461
Ksp22I	TGATCA	1 cut(s)	861
LmnI	GCTCC	3 cut(s)	328, 672, 827
Lsp1109I	GCAGC	1 cut(s)	548
LweI	GCATC	2 cut(s)	37, 1828
MaeI	CTAG	7 cut(s)	726, 974, 1259, 1277, 1371, 1646, 2120
MaeII	ACGT	4 cut(s)	71, 297, 399, 461
MaeIII	GTNAC	7 cut(s)	430, 577, 662, 896, 1810, 1919, 2155
MflI	RGATCY	2 cut(s)	512, 1165
MhlI	GDGCHC	2 cut(s)	189, 832
MluI	ACGCGT	1 cut(s)	1335
MmeI	TCCRAC	1 cut(s)	1370
Mph1103I	ATGCAT	3 cut(s)	30, 739, 1576
MroXI	GAANNNNTTC	1 cut(s)	1205
MseI	TTAA	2 cut(s)	63, 630
MslI	CAYNNNNRTG	2 cut(s)	226, 1824
MspA1I	CMGCKG	1 cut(s)	314
MspI	CCGG	6 cut(s)	257, 269, 855, 1101, 1362, 1600
MspR9I	CCNGG	4 cut(s)	218, 257, 1363, 1615
Mva1269I	GAATGC	2 cut(s)	2121, 2142
MvaI	CCWGG	2 cut(s)	218, 1615
MvnI	CGCG	3 cut(s)	789, 1337, 1928
MwoI	GCNNNNNNNGC	5 cut(s)	932, 1259, 1380, 1580, 1915
NciI	CCSGG	2 cut(s)	257, 1363
NcoI	CCATGG	1 cut(s)	366
NheI	GCTAGC	3 cut(s)	1258, 1276, 1370
NlaIV	GGNNCC	4 cut(s)	330, 1303, 1441, 1619
NmeAIII	GCCGAG	2 cut(s)	208, 907
NmuCI	GTSAC	4 cut(s)	430, 662, 896, 2155
NruI	TCGCGA	1 cut(s)	789
NsiI	ATGCAT	3 cut(s)	30, 739, 1576
NspI	RCATGY	2 cut(s)	766, 904
NspV	TTCGAA	1 cut(s)	1199
PceI	AGGCCT	1 cut(s)	1420
PciI	ACATGT	1 cut(s)	900
PctI	GAATGC	2 cut(s)	2121, 2142
PdmI	GAANNNNTTC	1 cut(s)	1205
PfeI	GAWTC	1 cut(s)	478
PfoI	TCCNGGA	1 cut(s)	255
PkrI	GCNGC	2 cut(s)	181, 538
PmaCI	CACGTG	1 cut(s)	400
PmlI	CACGTG	1 cut(s)	400
Ppu21I	YACGTR	1 cut(s)	400
PpuMI	RGGWCCY	1 cut(s)	1744
PscI	ACATGT	1 cut(s)	900
PshBI	ATTAAT	1 cut(s)	63
Psp124BI	GAGCTC	2 cut(s)	189, 832
Psp5II	RGGWCCY	1 cut(s)	1744
Psp6I	CCWGG	2 cut(s)	216, 1613
PspCI	CACGTG	1 cut(s)	400
PspGI	CCWGG	2 cut(s)	216, 1613
PspN4I	GGNNCC	4 cut(s)	330, 1303, 1441, 1619
PspPI	GGNCC	4 cut(s)	1088, 1193, 1465, 1744
PspPPI	RGGWCCY	1 cut(s)	1744
PstI	CTGCAG	2 cut(s)	292, 700
PsuI	RGATCY	2 cut(s)	512, 1165
RruI	TCGCGA	1 cut(s)	789
RsaI	GTAC	3 cut(s)	1105, 1288, 1667
RsaNI	GTAC	3 cut(s)	1104, 1287, 1666
RseI	CAYNNNNRTG	2 cut(s)	226, 1824
SacI	GAGCTC	2 cut(s)	189, 832
SalI	GTCGAC	1 cut(s)	293
SaqAI	TTAA	2 cut(s)	63, 630
SatI	GCNGC	2 cut(s)	180, 537
Sau96I	GGNCC	4 cut(s)	1088, 1193, 1465, 1744
ScrFI	CCNGG	4 cut(s)	218, 257, 1363, 1615
SduI	GDGCHC	2 cut(s)	189, 832
SfaNI	GCATC	2 cut(s)	37, 1828
SfcI	CTRYAG	5 cut(s)	115, 288, 696, 1341, 2172
SfuI	TTCGAA	1 cut(s)	1199
SinI	GGWCC	3 cut(s)	1193, 1465, 1744
SmiMI	CAYNNNNRTG	2 cut(s)	226, 1824
SmlI	CTYRAG	1 cut(s)	1913
SmoI	CTYRAG	1 cut(s)	1913
SseBI	AGGCCT	1 cut(s)	1420
SsiI	CCGC	7 cut(s)	179, 312, 341, 420, 472, 1928, 2084
SspI	AATATT	1 cut(s)	2031
SspMI	CTAG	7 cut(s)	726, 974, 1259, 1277, 1371, 1646, 2120
SstI	GAGCTC	2 cut(s)	189, 832
StuI	AGGCCT	1 cut(s)	1420
StyD4I	CCNGG	4 cut(s)	216, 255, 1361, 1613
StyI	CCWWGG	2 cut(s)	366, 1468
TaaI	ACNGT	5 cut(s)	79, 250, 337, 355, 1034
TaiI	ACGT	4 cut(s)	74, 300, 402, 464
TaqI	TCGA	7 cut(s)	67, 201, 244, 294, 375, 685, 1199
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	2 cut(s)	63, 630
Tru9I	TTAA	2 cut(s)	63, 630
TscAI	CASTG	6 cut(s)	358, 673, 705, 1404, 1441, 1986
TseFI	GTSAC	4 cut(s)	430, 662, 896, 2155
TseI	GCWGC	1 cut(s)	536
Tsp45I	GTSAC	4 cut(s)	430, 662, 896, 2155
TspDTI	ATGAA	9 cut(s)	292, 362, 573, 577, 868, 1308, 1817, 1862, 2059
TspGWI	ACGGA	2 cut(s)	79, 1769
TspRI	CASTG	6 cut(s)	358, 673, 705, 1404, 1441, 1986
VpaK11BI	GGWCC	3 cut(s)	1193, 1465, 1744
VspI	ATTAAT	1 cut(s)	63
XapI	RAATTY	4 cut(s)	998, 1393, 1681, 1853
XceI	RCATGY	2 cut(s)	766, 904
XmiI	GTMKAC	2 cut(s)	74, 294
XmnI	GAANNNNTTC	1 cut(s)	1205
XspI	CTAG	7 cut(s)	726, 974, 1259, 1277, 1371, 1646, 2120
Zsp2I	ATGCAT	3 cut(s)	30, 739, 1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.