Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

2356476 .. 2360944

Gene Structure 4469 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G033900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGAGACTTCTTCTAAGCTCCCCCTTCATATCTGCCATGTCCACAAGCTTTCAATCTTCATCAACCGGACACATATATTCTTCCACTCTATAGCTTTAGTCTTCTTGCTTTACTACAGAGCTTCTTTCTTCTTCTTCCATGACACTACCAAAACCAAAGCAACCACCTTAGCATGGCTTCTTGTGTTTGTCTCGGAAATCCTCCTATCCTTCGAGTGGCTCCTCAGCCAGTCTTTTCGATGGCGTCCCGTTTCACGAATCGCGTTCCCGGAGAGGCTACCTGGCGATGATAAGCTCCCAGCTGTTGATGTGTTCATCTGCACTGCGGATCCGGAGAAGGAACCGACTGTTGGAGTGATGAACACTGTGTTATCTGCCATGGCAATGGACTATCCTCCAGATAAACTTCATGTGTATCTGTCTGATGATGGTGGTGCTGCTGTGACTTTGAAGGGTATGAGAGAGGCTAGGAGGTTTGCAAAGTGGTGGCTTCCATTTTGTAGGAGGTATGGGATCAAGTGCAGGGCTCCGGAGGCTTATTTCTCTACAGAAGAGGAGGATGCTGATTTTGGCGGCAGCGAGTTCATTCAAGACAGAGAAGATATTAAGGAGAAATATGAGGTGTTCAAGAAAAGAGTAAGAGAAAAAGCAACGGTTGGGGACACAAGGAGCAGACTGGGTCGAGATCACCCTGCAGTGATTGAGGTTATACAAGAAGCATCCAGTGATGATGCAATTCGAGAGAATGAAACCAAAAATATGCCTCTCCTTGTTTATGTTTCTCGTGAGAAAAGGCCTTCTCATCCTCACTATTTTAAAGCTGGAGCGCTTAATGTTTTACTACGAGTCTCTGGTGTGATAAGCAATTCTCCTTACATATTAGGGCTAGATTGTGACATGCATTGCCATGATCCAAGTTCGGCTCGGCAAGCAATGTGTTTCCATCTTGACCCAAAGATATCACCCTCCCTAGCACTTGTTCAATTCCCTCAAAAATTTCACAACATCAGTAATAATGATATCTATGACAGTCAGCTGAGGTCGGTATTTTCGCTGCTATGGCAAGGTTATGATGGGGTTGGAGGGCCATGTGTGTCTGGTACGGGCTATTACATCAAGAGGTTGTCTTTATGTTCAAACTCCATACATGAAGATGGGGATCCCATGAAACTTAGACAATCTTATGGTCCATCCAATGAGTTCATCAAATCCCTCCACCAAAACAACAAGCCTGATATGCTCATCCACAGAAAGAATGCATTGCTAAATGAAGCCCAACTTCTAGCCTCTTGTGCCTTCGAAAATGGCACCGAATGGGGGGAAGAGGTTGGTTTCATGTATGGGTCTGTGGTTGAAGATTACTTCACAGGGTTTCGTTTGCATTGCAAAGGTTGGATTTCTGTGTATTGTAATCCACCAAGGCCACAGTTCTTGGGCAGTGGCACCACCAATTTGGATGACTTTTTAGTCCAAGGGACTAGATGGACCTCTGGGTTGGTTGATGTTGCTATCTCCAAGTTTTGTCCTCTTATATATGGCCCTTTGAAAACGCACACTTTCGTTCAAAGCATGTGTTATGCAGAACTTGCTCTTTTCCCCATTTTGTATTTCTTGCCATTGTGGTGCTTTGCTACCATACCTCAGCTCTGCCTACTCAACGGCATTCCTTTGTACCCAGAGGTCTCAAATTCATACTTCATCGTATTTTCGTTCGTATTCCTATCGTCGATTTCAAAACATTTATACGAAGTTCTCTCAACGGGATTTACATTTCGACATTGGATAAATGAGCAAAGGATATGGATGATGAAGTCAGTTACATCTCACTTATATGGCAGTGTGGATGCCTTCATGAAGAAAATTGGTATGAGAGAAGCCAGTTTCTTCCCAACCAACAAAGTTGACGATGTTGACCAACTCAAGCGTTACAATATGGGGGTATTTGATTTCCAAACATCAATATTATTTCTTGCTCCAATGGCTGCTCTGGTGATCTTGAACATGGCTTCCTTTGCTGTTGGGATTTCTAGAGTCATCTTTTCGGGGGAGTTGGACAAATTTTTCATACAAGTTTTCATACCCTTTTATGTCATTTTGATGAACTACCCTATCGTTGAAGGGATGCTGATAAGGAAAGACAGGGGTCGCATTCCACCATCAGTCACATTACTCTCTGCCATAGTTTCCTTGATTTTCTATTTTTTGGGTTCTATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

742

Amino Acids

84.57

Weight (kDa)

7.29

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1466
AccB1I	GGYRCC	2 cut(s)	1307, 1442
AccII	CGCG	1 cut(s)	263
AccIII	TCCGGA	2 cut(s)	331, 529
AciI	CCGC	2 cut(s)	326, 573
AclWI	GGATC	6 cut(s)	323, 336, 521, 905, 1154, 1167
AcsI	RAATTY	3 cut(s)	995, 1687, 2057
AcyI	GRCGYC	1 cut(s)	244
AfaI	GTAC	2 cut(s)	1102, 1673
AfeI	AGCGCT	1 cut(s)	828
AfiI	CCNNNNNNNGG	4 cut(s)	174, 216, 350, 1317
AjnI	CCWGG	1 cut(s)	280
AjuI	GAANNNNNNNTTGG	2 cut(s)	333, 365
AloI	GAACNNNNNNTCC	2 cut(s)	1991, 2023
AluBI	AGCT	9 cut(s)	19, 49, 95, 122, 295, 302, 821, 1036, 1645
AluI	AGCT	9 cut(s)	19, 49, 95, 122, 295, 302, 821, 1036, 1645
Alw26I	GTCTC	3 cut(s)	196, 853, 1687
AlwI	GGATC	6 cut(s)	323, 336, 521, 905, 1154, 1167
Aor13HI	TCCGGA	2 cut(s)	331, 529
Aor51HI	AGCGCT	1 cut(s)	828
AoxI	GGCC	4 cut(s)	794, 1085, 1421, 1537
ApeKI	GCWGC	4 cut(s)	437, 576, 1054, 1982
ApoI	RAATTY	3 cut(s)	995, 1687, 2057
AspLEI	GCGC	1 cut(s)	829
AspS9I	GGNCC	4 cut(s)	1085, 1187, 1485, 1538
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	3 cut(s)	680, 954, 2002
AsuII	TTCGAA	1 cut(s)	1299
AvaII	GGWCC	2 cut(s)	1187, 1485
BamHI	GGATCC	2 cut(s)	328, 1159
BanI	GGYRCC	2 cut(s)	1307, 1442
BanII	GRGCYC	1 cut(s)	529
BauI	CACGAG	1 cut(s)	783
BbsI	GAAGAC	1 cut(s)	94
BbvCI	CCTCAGC	3 cut(s)	224, 1037, 1641
BbvI	GCAGC	4 cut(s)	424, 588, 1041, 1969
BccI	CCATC	8 cut(s)	234, 422, 951, 1067, 1148, 1198, 1476, 2164
BceAI	ACGGC	1 cut(s)	1675
BciT130I	CCWGG	1 cut(s)	282
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	3 cut(s)	196, 853, 1687
BfaI	CTAG	6 cut(s)	468, 887, 971, 1283, 1479, 2028
BfmI	CTRYAG	4 cut(s)	90, 115, 546, 693
BfoI	RGCGCY	1 cut(s)	830
BisI	GCNGC	5 cut(s)	438, 574, 577, 1055, 1983
BlsI	GCNGC	5 cut(s)	439, 575, 578, 1056, 1984
Bme1390I	CCNGG	2 cut(s)	269, 282
Bme18I	GGWCC	2 cut(s)	1187, 1485
BmgT120I	GGNCC	4 cut(s)	1085, 1187, 1485, 1538
BmiI	GGNNCC	7 cut(s)	221, 330, 342, 528, 1161, 1309, 1444
BmrFI	CCNGG	2 cut(s)	269, 282
BmrI	ACTGGG	1 cut(s)	686
BmsI	GCATC	5 cut(s)	550, 721, 728, 1834, 2112
BmuI	ACTGGG	1 cut(s)	686
BoxI	GACNNNNGTC	1 cut(s)	2142
BpiI	GAAGAC	1 cut(s)	94
BpmI	CTGGAG	2 cut(s)	381, 843
Bpu10I	CCTNAGC	4 cut(s)	169, 224, 1037, 1641
Bpu14I	TTCGAA	1 cut(s)	1299
BpuEI	CTTGAG	1 cut(s)	1904
BpuMI	CCSGG	1 cut(s)	269
BsaBI	GATNNNNATC	1 cut(s)	1158
BsaHI	GRCGYC	1 cut(s)	244
BsaI	GGTCTC	1 cut(s)	1687
BsaJI	CCNNGG	3 cut(s)	378, 1418, 1471
BsaWI	WCCGGW	3 cut(s)	66, 331, 529
Bsc4I	CCNNNNNNNGG	4 cut(s)	174, 216, 350, 1317
Bse1I	ACTGG	4 cut(s)	229, 681, 723, 1878
Bse3DI	GCAATG	5 cut(s)	390, 901, 939, 1259, 1381
Bse8I	GATNNNNATC	1 cut(s)	1158
BseAI	TCCGGA	2 cut(s)	331, 529
BseBI	CCWGG	1 cut(s)	282
BseDI	CCNNGG	3 cut(s)	378, 1418, 1471
BseGI	GGATG	9 cut(s)	565, 719, 802, 1190, 1242, 1462, 1809, 1849, 2127
BseJI	GATNNNNATC	1 cut(s)	1158
BseLI	CCNNNNNNNGG	4 cut(s)	174, 216, 350, 1317
BseMI	GCAATG	5 cut(s)	390, 901, 939, 1259, 1381
BseMII	CTCAG	3 cut(s)	238, 1028, 1655
BseNI	ACTGG	4 cut(s)	229, 681, 723, 1878
BseRI	GAGGAG	2 cut(s)	212, 569
BseXI	GCAGC	4 cut(s)	424, 588, 1041, 1969
BseYI	CCCAGC	1 cut(s)	298
BsgI	GTGCAG	2 cut(s)	304, 541
Bsh1236I	CGCG	1 cut(s)	263
BshFI	GGCC	4 cut(s)	796, 1087, 1423, 1539
BshNI	GGYRCC	2 cut(s)	1307, 1442
BsiSI	CCGG	4 cut(s)	67, 269, 332, 530
BslFI	GGGAC	3 cut(s)	231, 674, 1489
BslI	CCNNNNNNNGG	4 cut(s)	174, 216, 350, 1317
BsmAI	GTCTC	3 cut(s)	196, 853, 1687
BsmFI	GGGAC	3 cut(s)	231, 674, 1489
BsmI	GAATGC	3 cut(s)	1261, 1662, 2148
BsnI	GGCC	4 cut(s)	796, 1087, 1423, 1539
Bso31I	GGTCTC	1 cut(s)	1687
Bsp119I	TTCGAA	1 cut(s)	1299
Bsp1286I	GDGCHC	1 cut(s)	529
Bsp13I	TCCGGA	2 cut(s)	331, 529
Bsp143I	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
Bsp19I	CCATGG	1 cut(s)	378
BspACI	CCGC	2 cut(s)	326, 573
BspANI	GGCC	4 cut(s)	796, 1087, 1423, 1539
BspCNI	CTCAG	3 cut(s)	237, 1029, 1654
BspEI	TCCGGA	2 cut(s)	331, 529
BspFNI	CGCG	1 cut(s)	263
BspHI	TCATGA	1 cut(s)	1851
BspLI	GGNNCC	7 cut(s)	221, 330, 342, 528, 1161, 1309, 1444
BspMAI	CTGCAG	1 cut(s)	697
BspPI	GGATC	6 cut(s)	323, 336, 521, 905, 1154, 1167
BspT104I	TTCGAA	1 cut(s)	1299
BspT107I	GGYRCC	2 cut(s)	1307, 1442
BspTNI	GGTCTC	1 cut(s)	1687
BsrDI	GCAATG	5 cut(s)	390, 901, 939, 1259, 1381
BsrI	ACTGG	4 cut(s)	229, 681, 723, 1878
BssECI	CCNNGG	3 cut(s)	378, 1418, 1471
BssMI	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
BssNI	GRCGYC	1 cut(s)	244
BssSI	CACGAG	1 cut(s)	783
BssT1I	CCWWGG	3 cut(s)	378, 1418, 1471
Bst2BI	CACGAG	1 cut(s)	783
Bst2UI	CCWGG	1 cut(s)	282
Bst4CI	ACNGT	5 cut(s)	349, 367, 655, 1031, 1428
Bst6I	CTCTTC	2 cut(s)	546, 1317
BstACI	GRCGYC	1 cut(s)	244
BstAPI	GCANNNNNTGC	1 cut(s)	1586
BstBI	TTCGAA	1 cut(s)	1299
BstC8I	GCNNGC	1 cut(s)	930
BstDEI	CTNAG	6 cut(s)	15, 169, 224, 1037, 1172, 1641
BstDSI	CCRYGG	1 cut(s)	378
BstF5I	GGATG	9 cut(s)	565, 719, 802, 1190, 1242, 1462, 1809, 1849, 2127
BstFNI	CGCG	1 cut(s)	263
BstH2I	RGCGCY	1 cut(s)	830
BstHHI	GCGC	1 cut(s)	829
BstKTI	GATC	6 cut(s)	331, 516, 688, 913, 1162, 1995
BstMAI	GTCTC	3 cut(s)	196, 853, 1687
BstMBI	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
BstMWI	GCNNNNNNNGC	8 cut(s)	533, 929, 1060, 1237, 1292, 1586, 1979, 2012
BstNI	CCWGG	1 cut(s)	282
BstNSI	RCATGY	2 cut(s)	901, 1573
BstPAI	GACNNNNGTC	1 cut(s)	2142
BstSCI	CCNGG	2 cut(s)	267, 280
BstSFI	CTRYAG	4 cut(s)	90, 115, 546, 693
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	4 cut(s)	424, 588, 1041, 1969
BstV2I	GAAGAC	1 cut(s)	94
BstX2I	RGATCY	2 cut(s)	328, 1159
BstXI	CCANNNNNNTGG	2 cut(s)	385, 1453
BstYI	RGATCY	2 cut(s)	328, 1159
BsuRI	GGCC	4 cut(s)	796, 1087, 1423, 1539
BtgI	CCRYGG	1 cut(s)	378
BtgZI	GCGATG	1 cut(s)	300
BtsCI	GGATG	9 cut(s)	565, 719, 802, 1190, 1242, 1462, 1809, 1849, 2127
BtsI	GCAGTG	4 cut(s)	321, 702, 1444, 1843
BtsIMutI	CAGTG	6 cut(s)	321, 363, 702, 730, 1444, 1843
Cac8I	GCNNGC	1 cut(s)	930
CciI	TCATGA	1 cut(s)	1851
CfoI	GCGC	1 cut(s)	829
Cfr13I	GGNCC	4 cut(s)	1085, 1187, 1485, 1538
CseI	GACGC	1 cut(s)	233
Csp6I	GTAC	2 cut(s)	1101, 1672
CspCI	CAANNNNNGTGG	2 cut(s)	1413, 1448
CviQI	GTAC	2 cut(s)	1101, 1672
DdeI	CTNAG	6 cut(s)	15, 169, 224, 1037, 1172, 1641
DpnI	GATC	6 cut(s)	330, 515, 687, 912, 1161, 1994
DpnII	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
DraI	TTTAAA	1 cut(s)	817
DrdI	GACNNNNNNGTC	1 cut(s)	1466
DseDI	GACNNNNNNGTC	1 cut(s)	1466
Eam1104I	CTCTTC	2 cut(s)	546, 1317
EarI	CTCTTC	2 cut(s)	546, 1317
Eco130I	CCWWGG	3 cut(s)	378, 1418, 1471
Eco147I	AGGCCT	1 cut(s)	796
Eco24I	GRGCYC	1 cut(s)	529
Eco31I	GGTCTC	1 cut(s)	1687
Eco32I	GATATC	2 cut(s)	960, 1021
Eco47I	GGWCC	2 cut(s)	1187, 1485
Eco47III	AGCGCT	1 cut(s)	828
EcoRII	CCWGG	1 cut(s)	280
EcoRV	GATATC	2 cut(s)	960, 1021
EcoT14I	CCWWGG	3 cut(s)	378, 1418, 1471
EcoT22I	ATGCAT	2 cut(s)	903, 1261
EcoT38I	GRGCYC	1 cut(s)	529
ErhI	CCWWGG	3 cut(s)	378, 1418, 1471
FalI	AAGNNNNNCTT	2 cut(s)	1263, 1295
FaqI	GGGAC	3 cut(s)	231, 674, 1489
Fnu4HI	GCNGC	5 cut(s)	438, 574, 577, 1055, 1983
FokI	GGATG	9 cut(s)	572, 706, 789, 1177, 1229, 1469, 1816, 1856, 2134
FriOI	GRGCYC	1 cut(s)	529
Fsp4HI	GCNGC	5 cut(s)	438, 574, 577, 1055, 1983
FspBI	CTAG	6 cut(s)	468, 887, 971, 1283, 1479, 2028
GlaI	GCGC	1 cut(s)	828
GluI	GCNGC	5 cut(s)	438, 574, 577, 1055, 1983
GsaI	CCCAGC	1 cut(s)	302
GsuI	CTGGAG	2 cut(s)	381, 843
HaeII	RGCGCY	1 cut(s)	830
HaeIII	GGCC	4 cut(s)	796, 1087, 1423, 1539
HapII	CCGG	4 cut(s)	67, 269, 332, 530
HgaI	GACGC	1 cut(s)	233
HhaI	GCGC	1 cut(s)	829
Hin1I	GRCGYC	1 cut(s)	244
Hin6I	GCGC	1 cut(s)	827
HinP1I	GCGC	1 cut(s)	827
HincII	GTYRAC	2 cut(s)	1903, 1912
HindII	GTYRAC	2 cut(s)	1903, 1912
HindIII	AAGCTT	1 cut(s)	47
HinfI	GANTC	3 cut(s)	258, 846, 2031
HpaII	CCGG	4 cut(s)	67, 269, 332, 530
HphI	GGTGA	3 cut(s)	680, 954, 2002
Hpy166II	GTNNAC	3 cut(s)	43, 1903, 1912
Hpy188I	TCNGA	2 cut(s)	196, 424
Hpy8I	GTNNAC	3 cut(s)	43, 1903, 1912
Hpy99I	CGWCG	1 cut(s)	1729
HpyAV	CCTTC	8 cut(s)	35, 220, 331, 445, 807, 1306, 1858, 2111
HpyCH4III	ACNGT	5 cut(s)	349, 367, 655, 1031, 1428
HpyF10VI	GCNNNNNNNGC	8 cut(s)	533, 929, 1060, 1237, 1292, 1586, 1979, 2012
HpyF3I	CTNAG	6 cut(s)	15, 169, 224, 1037, 1172, 1641
Hsp92I	GRCGYC	1 cut(s)	244
HspAI	GCGC	1 cut(s)	827
Kpn2I	TCCGGA	2 cut(s)	331, 529
Kzo9I	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
LmnI	GCTCC	7 cut(s)	24, 225, 300, 532, 669, 824, 1978
Lsp1109I	GCAGC	4 cut(s)	424, 588, 1041, 1969
LweI	GCATC	5 cut(s)	550, 721, 728, 1834, 2112
MaeI	CTAG	6 cut(s)	468, 887, 971, 1283, 1479, 2028
MaeIII	GTNAC	5 cut(s)	442, 893, 1816, 1925, 2161
MalI	GATC	6 cut(s)	330, 515, 687, 912, 1161, 1994
MboI	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
MflI	RGATCY	2 cut(s)	328, 1159
MhlI	GDGCHC	1 cut(s)	529
MluCI	AATT	8 cut(s)	735, 865, 983, 995, 1450, 1687, 1860, 2057
MlyI	GAGTC	2 cut(s)	855, 2040
MmeI	TCCRAC	4 cut(s)	331, 1060, 1373, 2031
Mph1103I	ATGCAT	2 cut(s)	903, 1261
MroI	TCCGGA	2 cut(s)	331, 529
MseI	TTAA	3 cut(s)	606, 816, 831
MslI	CAYNNNNRTG	6 cut(s)	383, 906, 1152, 1621, 1830, 2096
MspA1I	CMGCKG	2 cut(s)	302, 1036
MspI	CCGG	4 cut(s)	67, 269, 332, 530
MspR9I	CCNGG	2 cut(s)	269, 282
Mva1269I	GAATGC	3 cut(s)	1261, 1662, 2148
MvaI	CCWGG	1 cut(s)	282
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	8 cut(s)	533, 929, 1060, 1237, 1292, 1586, 1979, 2012
NciI	CCSGG	1 cut(s)	269
NcoI	CCATGG	1 cut(s)	378
NdeII	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
NlaIV	GGNNCC	7 cut(s)	221, 330, 342, 528, 1161, 1309, 1444
NmeAIII	GCCGAG	1 cut(s)	904
NmuCI	GTSAC	3 cut(s)	442, 893, 2161
NsiI	ATGCAT	2 cut(s)	903, 1261
NspI	RCATGY	2 cut(s)	901, 1573
NspV	TTCGAA	1 cut(s)	1299
PagI	TCATGA	1 cut(s)	1851
PceI	AGGCCT	1 cut(s)	796
PctI	GAATGC	3 cut(s)	1261, 1662, 2148
PfeI	GAWTC	1 cut(s)	258
PflFI	GACNNNGTC	1 cut(s)	678
PfoI	TCCNGGA	1 cut(s)	267
PkrI	GCNGC	5 cut(s)	439, 575, 578, 1056, 1984
PleI	GAGTC	2 cut(s)	854, 2039
PpsI	GAGTC	2 cut(s)	854, 2039
PshAI	GACNNNNGTC	1 cut(s)	2142
Psp6I	CCWGG	1 cut(s)	280
PspFI	CCCAGC	1 cut(s)	298
PspGI	CCWGG	1 cut(s)	280
PspN4I	GGNNCC	7 cut(s)	221, 330, 342, 528, 1161, 1309, 1444
PspPI	GGNCC	4 cut(s)	1085, 1187, 1485, 1538
PstI	CTGCAG	1 cut(s)	697
PsuI	RGATCY	2 cut(s)	328, 1159
PsyI	GACNNNGTC	1 cut(s)	678
PvuII	CAGCTG	2 cut(s)	302, 1036
RsaI	GTAC	2 cut(s)	1102, 1673
RsaNI	GTAC	2 cut(s)	1101, 1672
RseI	CAYNNNNRTG	6 cut(s)	383, 906, 1152, 1621, 1830, 2096
SaqAI	TTAA	3 cut(s)	606, 816, 831
SatI	GCNGC	5 cut(s)	438, 574, 577, 1055, 1983
Sau3AI	GATC	6 cut(s)	328, 513, 685, 910, 1159, 1992
Sau96I	GGNCC	4 cut(s)	1085, 1187, 1485, 1538
SchI	GAGTC	2 cut(s)	855, 2040
ScrFI	CCNGG	2 cut(s)	269, 282
SduI	GDGCHC	1 cut(s)	529
SfaNI	GCATC	5 cut(s)	550, 721, 728, 1834, 2112
SfcI	CTRYAG	4 cut(s)	90, 115, 546, 693
SfuI	TTCGAA	1 cut(s)	1299
SinI	GGWCC	2 cut(s)	1187, 1485
SmiMI	CAYNNNNRTG	6 cut(s)	383, 906, 1152, 1621, 1830, 2096
SmlI	CTYRAG	1 cut(s)	1919
SmoI	CTYRAG	1 cut(s)	1919
Sse9I	AATT	8 cut(s)	735, 865, 983, 995, 1450, 1687, 1860, 2057
SseBI	AGGCCT	1 cut(s)	796
SsiI	CCGC	2 cut(s)	326, 573
SspI	AATATT	1 cut(s)	1962
SspMI	CTAG	6 cut(s)	468, 887, 971, 1283, 1479, 2028
StuI	AGGCCT	1 cut(s)	796
StyD4I	CCNGG	2 cut(s)	267, 280
StyI	CCWWGG	3 cut(s)	378, 1418, 1471
TaaI	ACNGT	5 cut(s)	349, 367, 655, 1031, 1428
TaqI	TCGA	7 cut(s)	213, 238, 682, 739, 1299, 1727, 1774
TasI	AATT	8 cut(s)	735, 865, 983, 995, 1450, 1687, 1860, 2057
TauI	GCSGC	1 cut(s)	576
TfiI	GAWTC	1 cut(s)	258
Tru1I	TTAA	3 cut(s)	606, 816, 831
Tru9I	TTAA	3 cut(s)	606, 816, 831
TscAI	CASTG	6 cut(s)	328, 370, 702, 730, 1444, 1843
TseFI	GTSAC	3 cut(s)	442, 893, 2161
TseI	GCWGC	4 cut(s)	437, 576, 1054, 1982
Tsp45I	GTSAC	3 cut(s)	442, 893, 2161
TspRI	CASTG	6 cut(s)	328, 370, 702, 730, 1444, 1843
Tth111I	GACNNNGTC	1 cut(s)	678
VpaK11BI	GGWCC	2 cut(s)	1187, 1485
XapI	RAATTY	3 cut(s)	995, 1687, 2057
XbaI	TCTAGA	1 cut(s)	2027
XceI	RCATGY	2 cut(s)	901, 1573
XspI	CTAG	6 cut(s)	468, 887, 971, 1283, 1479, 2028
Zsp2I	ATGCAT	2 cut(s)	903, 1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.