Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Forward (+)

7612999 .. 7616602

Gene Structure 3604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG035400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGATCAGACTTCTAATGCCCCTCTGCATCTCTGCCATGTCAACATGCTCACAATTTTCATCAATCGAACGTATGCAGTCATACACTCCGTCGCTTTATCATTCCTGCTTTATTATCGAGCCTCTTTCTTCTTCCAGGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAACTCCTCTTTTCCTTCGAATGGCTTCTAACCCAGGCATATCGGTGGAGGCCCGTCTCCCGAACTGTGTTCCCGGAGAGATTGCCAGAAGATGACAAACTTCCTGCAATCGACGTGTTCATTTGCACCGCTGATCCTGATCTGGAGCCAACCGTGGCGGTGATGAACACTGTAATATCAGCCATGGCACTCGACTATCCACCCGAGAAGCTTCACGTATATTTGTCAGATGATGCCGGCGCTGATGTGACTCTGAATGGTATGAGAGAGGCTTGGACGTTTGCAAAGCGGTGGATTCCATTTTGTAAGAGGTATAAGATTAAGTGCAGGTCTCCAAAAGCCTATTTCTCAGCAGCAGAGGATGAGAATGAAGATGGTGATTTTGATTTCGTACAAGAGAGGCAAATTGTTCAGGAAAAATATGAGGTGTTTAAGGAAAGAGTAAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTGGAGATCATTCTGCAGTTATTGAGGTGATACAAGAAAGTTCTAGTAATCATACATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTCGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTATCAATGTTCTTCTTCGGGTATCCGGTGTGATAAGTAATTCTCCCTTCATATTAGGGCTTGACTGTGACACGAATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCATTTGTTCAATTCCCTCAGAAATTCCACAACATCAGTAAGAATGACATCTATGACAGTCAGTATAGATCGATCTTTAAGGTGCTATGGCAAGGTTTGGATGGACTTCAAGGGCCAGCCATGTGCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGATCATAAGGATCTTATGGAACTTAGACAATCTGTTGGTCCATCAAATGAGTTCATAACATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCAGAGCTAGCTGAGACCCAACAGCTAGCCTCCTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATACGCGTCTGTAGCAGAAGATTTTTTGACTACGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGAGGCTTCACTAATTTAAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCAGCGGTGATTGCTATTTCCATCTCCAAATACTGTCCTCTTATATATGACCTTTCTCAAATATCTTTCCTTCAACGTATGTGCTATACATTGTTCGCAATTTCGCCTATTTGCCAGTTCTTCTCACTCTGGTGCCTTGCAACTATACCTCAGCTTTGCCTAGTCAATGGCATTTCCCTGTACCCTGAGGTTTCAAATTCATATTTTTGGATATTTTCTTTTGTATTCTTGTCATCTGTTTCGAGACATTTATACGAGGCCCTGACAACTGGCGCATCGTTACAACATTGGGTCTACGAGCAAAGAATTTGGATGATGAATGCAGTTACATCTCACTTATATGGTACTCTTGATGCTTTTATAAAGAAATTTGGCTTGAGGGAAGCAAGTTTCTCTATATCAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTACAATGCGGGGGTATTTGATTTCCAAACCTCAGCACTTTTTCTTGTTCCATTAGCATCATTGGTTATCTTGAACATGGCCTCCCTTTTTGTGGGCATTGCCAGAGTGATCTTTCTGGGGGAGTTGGAGAAGTTGTTTATACAAGTCTTCATACCATTTTATGCGGTGGTCGTCAATTACCCTATTATAGAAGGAATGCTATTAAGGAAAGACAATGGTCGCATTCCACCATCAATCACCCTATTGTCTGCTACAGCTTCAATCATTTTCTGTGTTTTGGGTTCAATTATTTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

734

Amino Acids

83.37

Weight (kDa)

6.13

Isoelectric Point (pI)

39.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 383	5.8e-80	Cellulose synthase
Cellulose_synt	PF03552	384 - 728	8.4e-54	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1832
AasI	GACNNNNNNGTC	1 cut(s)	1448
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	2 cut(s)	1286, 1602
AccI	GTMKAC	1 cut(s)	1764
AccII	CGCG	2 cut(s)	774, 1322
AciI	CCGC	8 cut(s)	179, 312, 341, 472, 1086, 1475, 1913, 2069
AclWI	GGATC	6 cut(s)	12, 311, 893, 932, 1149, 1158
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	5 cut(s)	983, 1378, 1666, 1776, 1838
AfaI	GTAC	5 cut(s)	576, 1090, 1273, 1652, 1816
AfiI	CCNNNNNNNGG	3 cut(s)	204, 1138, 1996
AflIII	ACRYGT	2 cut(s)	297, 1320
AgsI	TTSAA	9 cut(s)	728, 805, 971, 1070, 1544, 1665, 1978, 2166, 2190
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	135, 216
AleI	CACNNNNGTG	1 cut(s)	1600
AloI	GAACNNNNNNTCC	2 cut(s)	1970, 2002
Alw26I	GTCTC	5 cut(s)	244, 519, 772, 1244, 1708
AlwI	GGATC	6 cut(s)	12, 311, 893, 932, 1149, 1158
Ama87I	CYCGRG	1 cut(s)	386
AoxI	GGCC	6 cut(s)	180, 233, 1073, 1403, 1728, 1983
ApeKI	GCWGC	1 cut(s)	536
ApoI	RAATTY	5 cut(s)	983, 1378, 1666, 1776, 1838
Asp700I	GAANNNNTTC	1 cut(s)	207
AspLEI	GCGC	2 cut(s)	425, 1745
AspS9I	GGNCC	5 cut(s)	234, 1073, 1178, 1450, 1729
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	8 cut(s)	355, 572, 659, 706, 942, 1310, 1489, 2134
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	4 cut(s)	958, 1243, 1261, 1355
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	2 cut(s)	1178, 1450
AxyI	CCTNAGG	1 cut(s)	1656
BanI	GGYRCC	2 cut(s)	1286, 1602
BbsI	GAAGAC	1 cut(s)	2044
BbvCI	CCTCAGC	2 cut(s)	1620, 1936
BbvI	GCAGC	1 cut(s)	548
BciT130I	CCWGG	2 cut(s)	137, 218
BciVI	GTATCC	1 cut(s)	847
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	5 cut(s)	244, 519, 772, 1244, 1708
BfaI	CTAG	6 cut(s)	711, 959, 1244, 1262, 1356, 1631
BfmI	CTRYAG	3 cut(s)	681, 1326, 2157
BfoI	RGCGCY	1 cut(s)	426
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	847
BisI	GCNGC	2 cut(s)	180, 537
BlsI	GCNGC	2 cut(s)	181, 538
Bme1390I	CCNGG	3 cut(s)	137, 218, 257
Bme18I	GGWCC	2 cut(s)	1178, 1450
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	5 cut(s)	234, 1073, 1178, 1450, 1729
BmiI	GGNNCC	3 cut(s)	330, 1288, 1604
BmrFI	CCNGG	3 cut(s)	137, 218, 257
BmrI	ACTGGG	1 cut(s)	663
BmsI	GCATC	5 cut(s)	37, 406, 1754, 1813, 1970
BmtI	GCTAGC	4 cut(s)	962, 1247, 1265, 1359
BmuI	ACTGGG	1 cut(s)	663
BoxI	GACNNNNGTC	1 cut(s)	2121
BpiI	GAAGAC	1 cut(s)	2044
BpmI	CTGGAG	2 cut(s)	347, 831
Bpu10I	CCTNAGC	2 cut(s)	1620, 1936
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	2 cut(s)	1867, 1883
BpuMI	CCSGG	1 cut(s)	257
Bsa29I	ATCGAT	1 cut(s)	1031
BsaAI	YACGTR	1 cut(s)	400
BsaBI	GATNNNNATC	1 cut(s)	321
BsaI	GGTCTC	2 cut(s)	519, 1244
BsaJI	CCNNGG	5 cut(s)	216, 336, 366, 1400, 1453
BsaWI	WCCGGW	1 cut(s)	839
BsaXI	ACNNNNNCTCC	4 cut(s)	1970, 2000, 2024, 2054
Bsc4I	CCNNNNNNNGG	3 cut(s)	204, 1138, 1996
Bse118I	RCCGGY	1 cut(s)	419
Bse1I	ACTGG	4 cut(s)	658, 1096, 1585, 1744
Bse21I	CCTNAGG	1 cut(s)	1656
Bse3DI	GCAATG	4 cut(s)	901, 927, 1363, 2001
Bse8I	GATNNNNATC	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	137, 218
BseCI	ATCGAT	1 cut(s)	1031
BseDI	CCNNGG	5 cut(s)	216, 336, 366, 1400, 1453
BseGI	GGATG	4 cut(s)	550, 1066, 1199, 1788
BseJI	GATNNNNATC	1 cut(s)	321
BseLI	CCNNNNNNNGG	3 cut(s)	204, 1138, 1996
BseMI	GCAATG	4 cut(s)	901, 927, 1363, 2001
BseMII	CTCAG	7 cut(s)	546, 992, 1239, 1421, 1634, 1647, 1950
BseNI	ACTGG	4 cut(s)	658, 1096, 1585, 1744
BseRI	GAGGAG	2 cut(s)	179, 746
BseX3I	CGGCCG	1 cut(s)	180
BseXI	GCAGC	1 cut(s)	548
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	2 cut(s)	774, 1322
Bsh1285I	CGRYCG	1 cut(s)	183
BshFI	GGCC	6 cut(s)	182, 235, 1075, 1405, 1730, 1985
BshNI	GGYRCC	2 cut(s)	1286, 1602
BshVI	ATCGAT	1 cut(s)	1031
BsiEI	CGRYCG	1 cut(s)	183
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	3 cut(s)	257, 420, 840
BslFI	GGGAC	1 cut(s)	1471
BslI	CCNNNNNNNGG	3 cut(s)	204, 1138, 1996
BsmAI	GTCTC	5 cut(s)	244, 519, 772, 1244, 1708
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	1 cut(s)	1471
BsmI	GAATGC	3 cut(s)	1795, 2106, 2127
BsnI	GGCC	6 cut(s)	182, 235, 1075, 1405, 1730, 1985
Bso31I	GGTCTC	2 cut(s)	519, 1244
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	774
BspACI	CCGC	8 cut(s)	179, 312, 341, 472, 1086, 1475, 1913, 2069
BspANI	GGCC	6 cut(s)	182, 235, 1075, 1405, 1730, 1985
BspCNI	CTCAG	7 cut(s)	545, 991, 1240, 1420, 1633, 1648, 1949
BspDI	ATCGAT	1 cut(s)	1031
BspFNI	CGCG	2 cut(s)	774, 1322
BspLI	GGNNCC	3 cut(s)	330, 1288, 1604
BspMAI	CTGCAG	1 cut(s)	685
BspMI	ACCTGC	1 cut(s)	501
BspOI	GCTAGC	4 cut(s)	962, 1247, 1265, 1359
BspPI	GGATC	6 cut(s)	12, 311, 893, 932, 1149, 1158
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	2 cut(s)	1286, 1602
BspTNI	GGTCTC	2 cut(s)	519, 1244
BsrDI	GCAATG	4 cut(s)	901, 927, 1363, 2001
BsrFI	RCCGGY	1 cut(s)	419
BsrI	ACTGG	4 cut(s)	658, 1096, 1585, 1744
BssAI	RCCGGY	1 cut(s)	419
BssECI	CCNNGG	5 cut(s)	216, 336, 366, 1400, 1453
BssT1I	CCWWGG	3 cut(s)	366, 1400, 1453
Bst2UI	CCWGG	2 cut(s)	137, 218
Bst4CI	ACNGT	6 cut(s)	250, 337, 355, 881, 1019, 1505
Bst6I	CTCTTC	1 cut(s)	1296
BstBAI	YACGTR	1 cut(s)	400
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	8 cut(s)	421, 918, 960, 1077, 1245, 1263, 1357, 1361
BstDEI	CTNAG	8 cut(s)	532, 978, 1163, 1248, 1407, 1620, 1656, 1936
BstDSI	CCRYGG	2 cut(s)	336, 366
BstENI	CCTNNNNNAGG	1 cut(s)	1136
BstF5I	GGATG	4 cut(s)	550, 1066, 1199, 1788
BstFNI	CGCG	2 cut(s)	774, 1322
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	2 cut(s)	425, 1745
BstMAI	GTCTC	5 cut(s)	244, 519, 772, 1244, 1708
BstMCI	CGRYCG	1 cut(s)	183
BstMWI	GCNNNNNNNGC	7 cut(s)	917, 1092, 1244, 1328, 1365, 1481, 1900
BstNI	CCWGG	2 cut(s)	137, 218
BstNSI	RCATGY	2 cut(s)	49, 751
BstPAI	GACNNNNGTC	1 cut(s)	2121
BstSCI	CCNGG	3 cut(s)	135, 216, 255
BstSFI	CTRYAG	3 cut(s)	681, 1326, 2157
BstUI	CGCG	2 cut(s)	774, 1322
BstV1I	GCAGC	1 cut(s)	548
BstV2I	GAAGAC	1 cut(s)	2044
BstX2I	RGATCY	1 cut(s)	1150
BstYI	RGATCY	1 cut(s)	1150
BstZI	CGGCCG	1 cut(s)	180
Bsu15I	ATCGAT	1 cut(s)	1031
Bsu36I	CCTNAGG	1 cut(s)	1656
BsuI	GTATCC	1 cut(s)	847
BsuRI	GGCC	6 cut(s)	182, 235, 1075, 1405, 1730, 1985
BsuTUI	ATCGAT	1 cut(s)	1031
BtgI	CCRYGG	2 cut(s)	336, 366
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	4 cut(s)	550, 1066, 1199, 1788
BtsIMutI	CAGTG	3 cut(s)	351, 651, 1389
BtuMI	TCGCGA	1 cut(s)	774
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	8 cut(s)	421, 918, 960, 1077, 1245, 1263, 1357, 1361
CfoI	GCGC	2 cut(s)	425, 1745
Cfr10I	RCCGGY	1 cut(s)	419
Cfr13I	GGNCC	5 cut(s)	234, 1073, 1178, 1450, 1729
ClaI	ATCGAT	1 cut(s)	1031
CseI	GACGC	1 cut(s)	1311
Csp6I	GTAC	5 cut(s)	575, 1089, 1272, 1651, 1815
CviAII	CATG	9 cut(s)	38, 46, 367, 644, 748, 791, 1081, 1981, 2200
CviQI	GTAC	5 cut(s)	575, 1089, 1272, 1651, 1815
DdeI	CTNAG	8 cut(s)	532, 978, 1163, 1248, 1407, 1620, 1656, 1936
DraI	TTTAAA	1 cut(s)	1437
DrdI	GACNNNNNNGTC	1 cut(s)	1448
DseDI	GACNNNNNNGTC	1 cut(s)	1448
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	1 cut(s)	1296
EarI	CTCTTC	1 cut(s)	1296
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	3 cut(s)	366, 1400, 1453
Eco147I	AGGCCT	1 cut(s)	1405
Eco31I	GGTCTC	2 cut(s)	519, 1244
Eco47I	GGWCC	2 cut(s)	1178, 1450
Eco52I	CGGCCG	1 cut(s)	180
Eco81I	CCTNAGG	1 cut(s)	1656
Eco88I	CYCGRG	1 cut(s)	386
EcoNI	CCTNNNNNAGG	1 cut(s)	1136
EcoO109I	RGGNCCY	1 cut(s)	1729
EcoRI	GAATTC	1 cut(s)	1378
EcoRII	CCWGG	2 cut(s)	135, 216
EcoT14I	CCWWGG	3 cut(s)	366, 1400, 1453
ErhI	CCWWGG	3 cut(s)	366, 1400, 1453
Esp3I	CGTCTC	1 cut(s)	244
FaeI	CATG	9 cut(s)	41, 49, 370, 647, 751, 794, 1084, 1984, 2203
FaqI	GGGAC	1 cut(s)	1471
FatI	CATG	9 cut(s)	37, 45, 366, 643, 747, 790, 1080, 1980, 2199
FauI	CCCGC	1 cut(s)	1906
FblI	GTMKAC	1 cut(s)	1764
Fnu4HI	GCNGC	2 cut(s)	180, 537
FokI	GGATG	4 cut(s)	557, 1073, 1186, 1795
Fsp4HI	GCNGC	2 cut(s)	180, 537
FspBI	CTAG	6 cut(s)	711, 959, 1244, 1262, 1356, 1631
GlaI	GCGC	2 cut(s)	424, 1744
GluI	GCNGC	2 cut(s)	180, 537
GsuI	CTGGAG	2 cut(s)	347, 831
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	6 cut(s)	182, 235, 1075, 1405, 1730, 1985
HapII	CCGG	3 cut(s)	257, 420, 840
HgaI	GACGC	1 cut(s)	1311
HhaI	GCGC	2 cut(s)	425, 1745
Hin1II	CATG	9 cut(s)	41, 49, 370, 647, 751, 794, 1084, 1984, 2203
Hin6I	GCGC	2 cut(s)	423, 1743
HinP1I	GCGC	2 cut(s)	423, 1743
HincII	GTYRAC	1 cut(s)	43
HindII	GTYRAC	1 cut(s)	43
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	2 cut(s)	433, 478
HpaII	CCGG	3 cut(s)	257, 420, 840
HphI	GGTGA	8 cut(s)	355, 572, 659, 706, 942, 1310, 1489, 2134
Hpy166II	GTNNAC	2 cut(s)	43, 1765
Hpy188I	TCNGA	4 cut(s)	9, 412, 438, 981
Hpy188III	TCNNGA	9 cut(s)	243, 320, 326, 596, 773, 1105, 1713, 1820, 1975
Hpy8I	GTNNAC	2 cut(s)	43, 1765
Hpy99I	CGWCG	2 cut(s)	95, 299
HpyAV	CCTTC	5 cut(s)	208, 795, 871, 1550, 2090
HpyCH4III	ACNGT	6 cut(s)	250, 337, 355, 881, 1019, 1505
HpyCH4IV	ACGT	7 cut(s)	71, 297, 399, 461, 1349, 1546, 1887
HpyF10VI	GCNNNNNNNGC	7 cut(s)	917, 1092, 1244, 1328, 1365, 1481, 1900
HpyF3I	CTNAG	8 cut(s)	532, 978, 1163, 1248, 1407, 1620, 1656, 1936
HpySE526I	ACGT	7 cut(s)	71, 297, 399, 461, 1349, 1546, 1887
Hsp92II	CATG	9 cut(s)	41, 49, 370, 647, 751, 794, 1084, 1984, 2203
HspAI	GCGC	2 cut(s)	423, 1743
KroI	GCCGGC	1 cut(s)	419
KroNI	GCCGGC	1 cut(s)	421
LmnI	GCTCC	3 cut(s)	328, 657, 812
Lsp1109I	GCAGC	1 cut(s)	548
LweI	GCATC	5 cut(s)	37, 406, 1754, 1813, 1970
MaeI	CTAG	6 cut(s)	711, 959, 1244, 1262, 1356, 1631
MaeII	ACGT	7 cut(s)	71, 297, 399, 461, 1349, 1546, 1887
MaeIII	GTNAC	6 cut(s)	430, 647, 881, 1749, 1795, 1904
MflI	RGATCY	1 cut(s)	1150
MluI	ACGCGT	1 cut(s)	1320
MlyI	GAGTC	1 cut(s)	427
MmeI	TCCRAC	2 cut(s)	1355, 2010
MroNI	GCCGGC	1 cut(s)	419
MroXI	GAANNNNTTC	1 cut(s)	207
MseI	TTAA	5 cut(s)	504, 615, 1038, 1436, 2108
MslI	CAYNNNNRTG	3 cut(s)	226, 1600, 1809
MspA1I	CMGCKG	2 cut(s)	314, 1475
MspI	CCGG	3 cut(s)	257, 420, 840
MspR9I	CCNGG	3 cut(s)	137, 218, 257
Mva1269I	GAATGC	3 cut(s)	1795, 2106, 2127
MvaI	CCWGG	2 cut(s)	137, 218
MvnI	CGCG	2 cut(s)	774, 1322
MwoI	GCNNNNNNNGC	7 cut(s)	917, 1092, 1244, 1328, 1365, 1481, 1900
NaeI	GCCGGC	1 cut(s)	421
NciI	CCSGG	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	366
NgoMIV	GCCGGC	1 cut(s)	419
NheI	GCTAGC	4 cut(s)	958, 1243, 1261, 1355
NlaIII	CATG	9 cut(s)	41, 49, 370, 647, 751, 794, 1084, 1984, 2203
NlaIV	GGNNCC	3 cut(s)	330, 1288, 1604
NmeAIII	GCCGAG	1 cut(s)	892
NmuCI	GTSAC	3 cut(s)	430, 647, 881
NruI	TCGCGA	1 cut(s)	774
NspI	RCATGY	2 cut(s)	49, 751
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	1 cut(s)	1600
PceI	AGGCCT	1 cut(s)	1405
PctI	GAATGC	3 cut(s)	1795, 2106, 2127
PdiI	GCCGGC	1 cut(s)	421
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	1 cut(s)	478
PfoI	TCCNGGA	2 cut(s)	135, 255
PkrI	GCNGC	2 cut(s)	181, 538
PleI	GAGTC	1 cut(s)	427
PpsI	GAGTC	1 cut(s)	427
Ppu21I	YACGTR	1 cut(s)	400
PshAI	GACNNNNGTC	1 cut(s)	2121
PsiI	TTATAA	1 cut(s)	1832
Psp6I	CCWGG	2 cut(s)	135, 216
PspGI	CCWGG	2 cut(s)	135, 216
PspN4I	GGNNCC	3 cut(s)	330, 1288, 1604
PspPI	GGNCC	5 cut(s)	234, 1073, 1178, 1450, 1729
PstI	CTGCAG	1 cut(s)	685
PsuI	RGATCY	1 cut(s)	1150
RruI	TCGCGA	1 cut(s)	774
RsaI	GTAC	5 cut(s)	576, 1090, 1273, 1652, 1816
RsaNI	GTAC	5 cut(s)	575, 1089, 1272, 1651, 1815
RseI	CAYNNNNRTG	3 cut(s)	226, 1600, 1809
SaqAI	TTAA	5 cut(s)	504, 615, 1038, 1436, 2108
SatI	GCNGC	2 cut(s)	180, 537
Sau96I	GGNCC	5 cut(s)	234, 1073, 1178, 1450, 1729
SchI	GAGTC	1 cut(s)	427
ScrFI	CCNGG	3 cut(s)	137, 218, 257
SfaNI	GCATC	5 cut(s)	37, 406, 1754, 1813, 1970
SfcI	CTRYAG	3 cut(s)	681, 1326, 2157
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	2 cut(s)	1178, 1450
SmiI	ATTTAAAT	1 cut(s)	1437
SmiMI	CAYNNNNRTG	3 cut(s)	226, 1600, 1809
SmlI	CTYRAG	2 cut(s)	1846, 1898
SmoI	CTYRAG	2 cut(s)	1846, 1898
SseBI	AGGCCT	1 cut(s)	1405
SsiI	CCGC	8 cut(s)	179, 312, 341, 472, 1086, 1475, 1913, 2069
SspMI	CTAG	6 cut(s)	711, 959, 1244, 1262, 1356, 1631
StuI	AGGCCT	1 cut(s)	1405
StyD4I	CCNGG	3 cut(s)	135, 216, 255
StyI	CCWWGG	3 cut(s)	366, 1400, 1453
SwaI	ATTTAAAT	1 cut(s)	1437
TaaI	ACNGT	6 cut(s)	250, 337, 355, 881, 1019, 1505
TaiI	ACGT	7 cut(s)	74, 300, 402, 464, 1352, 1549, 1890
TaqI	TCGA	7 cut(s)	67, 118, 201, 294, 375, 1031, 1712
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	5 cut(s)	504, 615, 1038, 1436, 2108
Tru9I	TTAA	5 cut(s)	504, 615, 1038, 1436, 2108
TscAI	CASTG	3 cut(s)	358, 658, 1389
TseFI	GTSAC	3 cut(s)	430, 647, 881
TseI	GCWGC	1 cut(s)	536
Tsp45I	GTSAC	3 cut(s)	430, 647, 881
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	3 cut(s)	358, 658, 1389
VpaK11BI	GGWCC	2 cut(s)	1178, 1450
XagI	CCTNNNNNAGG	1 cut(s)	1136
XapI	RAATTY	5 cut(s)	983, 1378, 1666, 1776, 1838
XceI	RCATGY	2 cut(s)	49, 751
XmiI	GTMKAC	1 cut(s)	1764
XmnI	GAANNNNTTC	1 cut(s)	207
XspI	CTAG	6 cut(s)	711, 959, 1244, 1262, 1356, 1631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.