Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000838

Physical Location & Seq

Genomic Coordinates Reverse (-)

59551838 .. 59556730

Gene Structure 4893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009885

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGGCTCAGAGTTCTAATGCCCCTATGCATCTCTGCCATGTCAACAAGCTCACAATCTTCATTAATCGAACGTATACAGTCATATACTCGGTCGCTTTATCATTCTTGCTTTACTATAGAGCCTCTTTCTTCTTCCATGACACCAAAACACCCATCTTACCATCTCTTATTGTCTTTGCGGCCGAGCTCGTGTCTTCCTTCGAATGGCTTCTAACCCAGGCATATCGGTGGAGGCCCGTCTCTCGAACTGTGTTTCCGGAGAGATTGCCGGAAGATGACAAACTTCCTGCAGTCGACGTGTTCATTTGCACCGCTGATCCGGATAAGGAGCCAACGGTGGAGGTGATGAACACTGTAATATCAGCCATGGCACTCGATTATCCACCCGAGAAGCTTCACGTGTATTTGTCAGATGATGGCGGTGCTGATGTGACTCTGAATGGCATGCGAGAGGCTTGGAAGTTTGCAAAGCAGTGGATTCCATTTTGTAAGAGGTATAAGATCAAGTGCAGGTCTCCGAAAGCCTATTTCTCAGCAGCAGAAGATGAGAATGAAGATGGTGCTTTGGGGGGTACTGATTTCATACAAGAGAGACAAATTGTTCAGGAAAAATATGAGCTGTTTAAGGAAAAAGTGAGAGAATACGCAAGGCATGGTGACACTGGGAGCAGTAAGCGTCGACATCATTCCGCAGTGATTGAGGTGATACAAGAAAATTCTAGTAATAATGCATTTGAAGAAAATGAGGCAAAAAACATGCCTCTCCTTGTTTATGTCTCTCGCGAGAAAAGACCTTCTCATGCCCATCATTTCAAGGCTGGAGCTCTCAATGTTCTGCTTCGGGTATCCGGTGTGATAAGTAATTCTCCCTTCATATTAGGGCTTGATTGTGACATGTATTGCAATGATCCAAGTTCAGCTCGGCAAGCAATGTGTTTCCACCTTGATCCCAAGCTCTCACCTACGCTAGCACTTGTGCAATTCCCTCAGAAATTCCACAACATCAGTAAGAAGGACATCTACGACAGTCAGTTGAGAGAGACGTTTACGGTGCTATGGCAAGGTTTTGATGGACTTCAAGGGCCATGCGTGTCCGGTACTGGCTATTACATCAAGAGGTTATCCTTGTATGGAAAATCCCTAAAGGAGGATCATAAGGATCTTATGGAACTTAGACAATTTGTTGGTCCATCAAGTGAGTTCATAAAATCCCTGCTTGGAAACTACAATCCTAATATGAAAATGGCACAGCTAGCTGAGACCCAACAACTGGCCTCTTGTACCTATGAAGATGGCACCAAATGGGGTGAAGAGGCTGGTTTCTTATATGCGTCTGTAGTGGAAGATTATTTCACAGGGTTCGCTAGCTTGCATTGCAAGGGTTGGAATTCAGTGTATTGCAATCCACCAAGGCCTCAGTTCTTGGGCAGTGGCACCACTAATTTGAATGACTTTTTGGTCCAAGGGACAAGATGGAGTTCTGGGTTGGTTGATGTTGCCGTCTCCAAGTACTGCCCTCTTATATATGGTCTTACTAAAATGTCTTTCCTTGAAAGTATGTGCTATGGATGGCTAGCAATTTTCCCTATTTGCCGGTTCTTCTCACTCTGGTGCCTTGCAACTATACCTCAACTTTGCCTAGTCAACGGCATTTCCCTGTACCCTGAGGTCTCAAATTCGTATTTTTGGATATTTTCTTTTGTATTCCTCTCGTCTTTTTTGAGACATTTATACGAGATCCTCACAACGGAAGCGTCATTACAACATTGGATATACGAGCAAAGAATATGGATGATGAAAGCAGTTACATCTCACTTATATGGTAGTCTTGATGCTTTTATGAAGAAATTTGGTTTGAGGGAAGCAAGTTTCTTCCCAACAAATAAAGTTGATGACGTTGAGCAACTCAAGCGTTATAACATGGGGGTATTTGATTTCCAAACCTCAGCACTTTTTCTTGTTCCATTGGCTTCATTGATAATCTTGAACTTGGCCTCCCTTTGTGTGGGCATTGCCAGAGTAATCTTTCTTGGGGAGTTGGAGAAGTTGTTCATACAAGTCTTCATACCATTTTATGCGGTGCTCGTCAATTACCCTATTATAGAAGGAATGCTAATAAGGAAAGACAATGGTCGCATCCCACCATCAGTCACCTTATTGTCTGCTACAGCTTCAATCATTTTCTGCGTTTTGGAGAGTGGCAATGACAATGGGAAGGCAAAAGGGTCCAATTTGGGCCATGAAGAGGCAGCCATTGACTGTAATGTAGGAGAGAGTGGCGATAAGGTTGGAAGTGGTAGTAGGAGCTGTTCTAGTGTTAGCGGTGCTAAGGATGTTGATAAAAAGGGGACTGACTCTGGTGTTAAAAAAGGTTTGAGAAAGGTTTGGCAGGAGCCAGATTTGGAGAAGATGACTTTGGACGATTGGTTTGATTATGTGGAAGTTTCTTTGCCGAAAGCGGTTAATGATGAGATTGACAAGATTTGTTCCGGAATGAGAGAGAAGGCTAAGCTAGTCCAGGAGTATATAGCAAAACACAAGAAGGAGAAGTGTCAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

854

Amino Acids

96.44

Weight (kDa)

6.47

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	98 - 386	4.7e-79	Cellulose synthase
Cellulose_synt	PF03552	388 - 731	1.9e-54	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000838)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02981 FvH4_4g02990
malus_domestica	MD02G1095700.v1.1 MD13G1209200.v1.1 MD15G1415100.v1.1 MD15G1415200.v1.1 MD16G1211700.v1.1 MD16G1211900.v1.1 MD16G1212000.v1.1
prunus_persica	Prupe.1G033700_v2.0.a1 Prupe.1G033700_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.1G033900_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.4G193000_v2.0.a1 Prupe.7G089900_v2.0.a1
pyrus_communis	pycom12g05820 pycom12g05850 pycom13g18120 pycom13g18130 pycom16g17740
rosa_chinensis	RchiOBHm_Chr4g0391141 RchiOBHm_Chr4g0391161 RchiOBHm_Chr4g0391171 RchiOBHm_Chr7g0211861
rosa_laevigata	RLG00000002959 RLG00000003213 RLG00000009880 RLG00000009881 RLG00000009882 RLG00000009884 RLG00000009885
rosa_multiflora	Rmu_co8060516.1_g000001 Rmu_sc0002852.1_g000004 Rmu_sc0009005.1_g000004 Rmu_sc0009836.1_g000005 Rmu_sc0020388.1_g000001 Rmu_sc0039496.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247330 Rroxscaffold_5G00336930 Rroxscaffold_5G00336950 Rroxscaffold_5G00336960 Rroxscaffold_5G00344820 Rroxscaffold_5G00344830 Rroxscaffold_5G00344850
rosa_rugosa	Rorug03G0334500 Rorug03G0334900
rosa_samantha	Rh4AG034900 Rh4AG035200 Rh4AG035400 Rh4BG030100 Rh4BG030200 Rh4BG030300 Rh4BG030500 Rh4BG030600 Rh4CG038700 Rh4CG038800 Rh4DG032100 Rh4DG032800 Rh4DG032900 Rh7AG262300 Rh7BG255800 Rh7DG268800
rosa_wichuraiana	Rw4G002720 Rw4G002750 Rw4G002760 Rw4G002770 Rw7G022360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1917
AasI	GACNNNNNNGTC	1 cut(s)	1457
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	3 cut(s)	1295, 1433, 1611
AccB7I	CCANNNNNTGG	1 cut(s)	1270
AccI	GTMKAC	3 cut(s)	74, 294, 679
AccII	CGCG	1 cut(s)	783
AccIII	TCCGGA	3 cut(s)	256, 319, 2489
AciI	CCGC	7 cut(s)	179, 312, 420, 690, 2078, 2322, 2459
AclWI	GGATC	6 cut(s)	311, 902, 941, 1158, 1167, 1732
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	5 cut(s)	715, 992, 1387, 1675, 1847
AcvI	CACGTG	1 cut(s)	400
AfaI	GTAC	5 cut(s)	574, 1099, 1282, 1511, 1661
AfiI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1270, 1747, 2005, 2245
AflIII	ACRYGT	3 cut(s)	297, 399, 894
AgsI	TTSAA	7 cut(s)	737, 814, 1079, 1447, 1553, 1987, 2175
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	216, 2517
AjuI	GAANNNNNNNTTGG	4 cut(s)	1439, 1471, 2399, 2431
AleI	CACNNNNGTG	1 cut(s)	1609
AloI	GAACNNNNNNTCC	6 cut(s)	238, 270, 1979, 2011, 2033, 2065
Alw21I	GWGCWC	3 cut(s)	189, 826, 2085
Alw26I	GTCTC	9 cut(s)	244, 519, 586, 781, 1034, 1253, 1507, 1675, 1717
AlwI	GGATC	6 cut(s)	311, 902, 941, 1158, 1167, 1732
Ama87I	CYCGRG	1 cut(s)	386
Aor13HI	TCCGGA	3 cut(s)	256, 319, 2489
AoxI	GGCC	7 cut(s)	180, 233, 1082, 1272, 1412, 1992, 2236
ApeKI	GCWGC	2 cut(s)	536, 2249
ApoI	RAATTY	5 cut(s)	715, 992, 1387, 1675, 1847
ArsI	GACNNNNNNTTYG	2 cut(s)	2411, 2443
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	2 cut(s)	207, 2048
AspS9I	GGNCC	6 cut(s)	234, 1082, 1187, 1459, 2226, 2236
AsuHPI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
AsuII	TTCGAA	1 cut(s)	201
AsuNHI	GCTAGC	4 cut(s)	967, 1252, 1364, 1573
AvaI	CYCGRG	1 cut(s)	386
AvaII	GGWCC	3 cut(s)	1187, 1459, 2226
AxyI	CCTNAGG	1 cut(s)	1665
BanI	GGYRCC	3 cut(s)	1295, 1433, 1611
BanII	GRGCYC	2 cut(s)	189, 826
BarI	GAAGNNNNNNTAC	4 cut(s)	1004, 1036, 1743, 1775
BauI	CACGAG	1 cut(s)	188
BbrPI	CACGTG	1 cut(s)	400
BbsI	GAAGAC	2 cut(s)	186, 2053
Bbv12I	GWGCWC	3 cut(s)	189, 826, 2085
BbvCI	CCTCAGC	1 cut(s)	1945
BbvI	GCAGC	2 cut(s)	548, 2261
BceAI	ACGGC	2 cut(s)	1484, 1663
BciT130I	CCWGG	2 cut(s)	218, 2519
BciVI	GTATCC	1 cut(s)	856
BcoDI	GTCTC	9 cut(s)	244, 519, 586, 781, 1034, 1253, 1507, 1675, 1717
BfaI	CTAG	8 cut(s)	720, 968, 1253, 1365, 1574, 1640, 2313, 2513
BfmI	CTRYAG	4 cut(s)	115, 288, 1335, 2166
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	856
BisI	GCNGC	3 cut(s)	180, 537, 2250
BlpI	GCTNAGC	1 cut(s)	2508
BlsI	GCNGC	3 cut(s)	181, 538, 2251
BmcAI	AGTACT	1 cut(s)	1511
Bme1390I	CCNGG	2 cut(s)	218, 2519
Bme18I	GGWCC	3 cut(s)	1187, 1459, 2226
BmeT110I	CYCGRG	1 cut(s)	386
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	6 cut(s)	234, 1082, 1187, 1459, 2226, 2236
BmiI	GGNNCC	6 cut(s)	330, 1297, 1435, 1613, 2227, 2394
BmrFI	CCNGG	2 cut(s)	218, 2519
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	3 cut(s)	37, 1822, 2145
BmtI	GCTAGC	4 cut(s)	971, 1256, 1368, 1577
BmuI	ACTGGG	1 cut(s)	672
BoxI	GACNNNNGTC	1 cut(s)	2130
BpiI	GAAGAC	2 cut(s)	186, 2053
BpmI	CTGGAG	1 cut(s)	840
Bpu10I	CCTNAGC	2 cut(s)	1945, 2328
Bpu1102I	GCTNAGC	1 cut(s)	2508
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	1 cut(s)	1892
BsaAI	YACGTR	1 cut(s)	400
BsaI	GGTCTC	3 cut(s)	519, 1253, 1675
BsaJI	CCNNGG	4 cut(s)	216, 366, 1409, 1462
BsaWI	WCCGGW	5 cut(s)	256, 319, 848, 1094, 2489
BsaXI	ACNNNNNCTCC	4 cut(s)	1979, 2009, 2033, 2063
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 1147, 1270, 1747, 2005, 2245
Bse118I	RCCGGY	1 cut(s)	1593
Bse1I	ACTGG	3 cut(s)	667, 1105, 1275
Bse21I	CCTNAGG	1 cut(s)	1665
Bse3DI	GCAATG	5 cut(s)	910, 936, 1372, 2010, 2209
BseAI	TCCGGA	3 cut(s)	256, 319, 2489
BseBI	CCWGG	2 cut(s)	218, 2519
BseDI	CCNNGG	4 cut(s)	216, 366, 1409, 1462
BseGI	GGATG	4 cut(s)	1574, 1797, 2136, 2338
BseLI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1270, 1747, 2005, 2245
BseMI	GCAATG	5 cut(s)	910, 936, 1372, 2010, 2209
BseMII	CTCAG	7 cut(s)	20, 546, 1001, 1248, 1430, 1656, 1959
BseNI	ACTGG	3 cut(s)	667, 1105, 1275
BseX3I	CGGCCG	1 cut(s)	180
BseXI	GCAGC	2 cut(s)	548, 2261
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	1 cut(s)	783
Bsh1285I	CGRYCG	2 cut(s)	93, 183
BshFI	GGCC	7 cut(s)	182, 235, 1084, 1274, 1414, 1994, 2238
BshNI	GGYRCC	3 cut(s)	1295, 1433, 1611
BsiEI	CGRYCG	2 cut(s)	93, 183
BsiHKAI	GWGCWC	3 cut(s)	189, 826, 2085
BsiHKCI	CYCGRG	1 cut(s)	386
BsiSI	CCGG	7 cut(s)	257, 269, 320, 849, 1095, 1594, 2490
BslFI	GGGAC	2 cut(s)	1480, 2362
BslI	CCNNNNNNNGG	6 cut(s)	204, 1147, 1270, 1747, 2005, 2245
BsmAI	GTCTC	9 cut(s)	244, 519, 586, 781, 1034, 1253, 1507, 1675, 1717
BsmBI	CGTCTC	3 cut(s)	244, 1034, 1507
BsmFI	GGGAC	2 cut(s)	1480, 2362
BsmI	GAATGC	1 cut(s)	2115
BsnI	GGCC	7 cut(s)	182, 235, 1084, 1274, 1414, 1994, 2238
Bso31I	GGTCTC	3 cut(s)	519, 1253, 1675
BsoBI	CYCGRG	1 cut(s)	386
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	3 cut(s)	189, 826, 2085
Bsp13I	TCCGGA	3 cut(s)	256, 319, 2489
Bsp143I	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
Bsp1720I	GCTNAGC	1 cut(s)	2508
Bsp19I	CCATGG	1 cut(s)	366
Bsp68I	TCGCGA	1 cut(s)	783
BspACI	CCGC	7 cut(s)	179, 312, 420, 690, 2078, 2322, 2459
BspANI	GGCC	7 cut(s)	182, 235, 1084, 1274, 1414, 1994, 2238
BspCNI	CTCAG	7 cut(s)	19, 545, 1000, 1249, 1429, 1657, 1958
BspEI	TCCGGA	3 cut(s)	256, 319, 2489
BspFNI	CGCG	1 cut(s)	783
BspLI	GGNNCC	6 cut(s)	330, 1297, 1435, 1613, 2227, 2394
BspMAI	CTGCAG	1 cut(s)	292
BspMI	ACCTGC	1 cut(s)	501
BspOI	GCTAGC	4 cut(s)	971, 1256, 1368, 1577
BspPI	GGATC	6 cut(s)	311, 902, 941, 1158, 1167, 1732
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	3 cut(s)	1295, 1433, 1611
BspTNI	GGTCTC	3 cut(s)	519, 1253, 1675
BsrDI	GCAATG	5 cut(s)	910, 936, 1372, 2010, 2209
BsrFI	RCCGGY	1 cut(s)	1593
BsrI	ACTGG	3 cut(s)	667, 1105, 1275
BssAI	RCCGGY	1 cut(s)	1593
BssECI	CCNNGG	4 cut(s)	216, 366, 1409, 1462
BssMI	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
BssNAI	GTATAC	1 cut(s)	75
BssSI	CACGAG	1 cut(s)	188
BssT1I	CCWWGG	3 cut(s)	366, 1409, 1462
Bst1107I	GTATAC	1 cut(s)	75
Bst2BI	CACGAG	1 cut(s)	188
Bst2UI	CCWGG	2 cut(s)	218, 2519
Bst4CI	ACNGT	7 cut(s)	79, 250, 337, 355, 1028, 1051, 2261
Bst6I	CTCTTC	2 cut(s)	1305, 2238
BstBAI	YACGTR	1 cut(s)	400
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	7 cut(s)	446, 927, 969, 1254, 1366, 1370, 1575
BstDSI	CCRYGG	1 cut(s)	366
BstENI	CCTNNNNNAGG	1 cut(s)	1145
BstF5I	GGATG	4 cut(s)	1574, 1797, 2136, 2338
BstFNI	CGCG	1 cut(s)	783
BstKTI	GATC	7 cut(s)	319, 504, 910, 949, 1153, 1162, 1740
BstMAI	GTCTC	9 cut(s)	244, 519, 586, 781, 1034, 1253, 1507, 1675, 1717
BstMBI	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
BstMCI	CGRYCG	2 cut(s)	93, 183
BstMWI	GCNNNNNNNGC	4 cut(s)	926, 1253, 1374, 1909
BstNI	CCWGG	2 cut(s)	218, 2519
BstNSI	RCATGY	3 cut(s)	448, 760, 898
BstPAI	GACNNNNGTC	1 cut(s)	2130
BstSCI	CCNGG	2 cut(s)	216, 2517
BstSFI	CTRYAG	4 cut(s)	115, 288, 1335, 2166
BstUI	CGCG	1 cut(s)	783
BstV1I	GCAGC	2 cut(s)	548, 2261
BstV2I	GAAGAC	2 cut(s)	186, 2053
BstX2I	RGATCY	2 cut(s)	1159, 1737
BstYI	RGATCY	2 cut(s)	1159, 1737
BstZ17I	GTATAC	1 cut(s)	75
BstZI	CGGCCG	1 cut(s)	180
Bsu36I	CCTNAGG	1 cut(s)	1665
BsuI	GTATCC	1 cut(s)	856
BsuRI	GGCC	7 cut(s)	182, 235, 1084, 1274, 1414, 1994, 2238
BtgI	CCRYGG	1 cut(s)	366
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	4 cut(s)	1574, 1797, 2136, 2338
BtsI	GCAGTG	3 cut(s)	479, 699, 1435
BtsIMutI	CAGTG	6 cut(s)	351, 479, 660, 699, 1398, 1435
BtuMI	TCGCGA	1 cut(s)	783
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	7 cut(s)	446, 927, 969, 1254, 1366, 1370, 1575
Cfr10I	RCCGGY	1 cut(s)	1593
Cfr13I	GGNCC	6 cut(s)	234, 1082, 1187, 1459, 2226, 2236
CseI	GACGC	3 cut(s)	665, 1320, 1743
Csp6I	GTAC	5 cut(s)	573, 1098, 1281, 1510, 1660
CviQI	GTAC	5 cut(s)	573, 1098, 1281, 1510, 1660
DpnI	GATC	7 cut(s)	318, 503, 909, 948, 1152, 1161, 1739
DpnII	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
DrdI	GACNNNNNNGTC	1 cut(s)	1457
DseDI	GACNNNNNNGTC	1 cut(s)	1457
EaeI	YGGCCR	1 cut(s)	180
EagI	CGGCCG	1 cut(s)	180
Eam1104I	CTCTTC	2 cut(s)	1305, 2238
EarI	CTCTTC	2 cut(s)	1305, 2238
Ecl136II	GAGCTC	2 cut(s)	187, 824
EclXI	CGGCCG	1 cut(s)	180
Eco130I	CCWWGG	3 cut(s)	366, 1409, 1462
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	2 cut(s)	189, 826
Eco31I	GGTCTC	3 cut(s)	519, 1253, 1675
Eco47I	GGWCC	3 cut(s)	1187, 1459, 2226
Eco52I	CGGCCG	1 cut(s)	180
Eco53kI	GAGCTC	2 cut(s)	187, 824
Eco72I	CACGTG	1 cut(s)	400
Eco81I	CCTNAGG	1 cut(s)	1665
Eco88I	CYCGRG	1 cut(s)	386
EcoICRI	GAGCTC	2 cut(s)	187, 824
EcoNI	CCTNNNNNAGG	1 cut(s)	1145
EcoRI	GAATTC	1 cut(s)	1387
EcoRII	CCWGG	2 cut(s)	216, 2517
EcoT14I	CCWWGG	3 cut(s)	366, 1409, 1462
EcoT22I	ATGCAT	2 cut(s)	30, 733
EcoT38I	GRGCYC	2 cut(s)	189, 826
ErhI	CCWWGG	3 cut(s)	366, 1409, 1462
Esp3I	CGTCTC	3 cut(s)	244, 1034, 1507
FaqI	GGGAC	2 cut(s)	1480, 2362
FblI	GTMKAC	3 cut(s)	74, 294, 679
Fnu4HI	GCNGC	3 cut(s)	180, 537, 2250
FokI	GGATG	4 cut(s)	1581, 1804, 2123, 2345
FriOI	GRGCYC	2 cut(s)	189, 826
Fsp4HI	GCNGC	3 cut(s)	180, 537, 2250
FspBI	CTAG	8 cut(s)	720, 968, 1253, 1365, 1574, 1640, 2313, 2513
GluI	GCNGC	3 cut(s)	180, 537, 2250
GsuI	CTGGAG	1 cut(s)	840
HaeIII	GGCC	7 cut(s)	182, 235, 1084, 1274, 1414, 1994, 2238
HapII	CCGG	7 cut(s)	257, 269, 320, 849, 1095, 1594, 2490
HgaI	GACGC	3 cut(s)	665, 1320, 1743
HincII	GTYRAC	4 cut(s)	43, 295, 680, 1645
HindII	GTYRAC	4 cut(s)	43, 295, 680, 1645
HindIII	AAGCTT	1 cut(s)	392
HinfI	GANTC	3 cut(s)	433, 478, 2354
HpaII	CCGG	7 cut(s)	257, 269, 320, 849, 1095, 1594, 2490
HphI	GGTGA	6 cut(s)	355, 668, 715, 951, 1319, 2143
Hpy166II	GTNNAC	6 cut(s)	43, 75, 295, 680, 1047, 1645
Hpy188I	TCNGA	5 cut(s)	9, 412, 438, 519, 990
Hpy188III	TCNNGA	9 cut(s)	243, 257, 320, 605, 782, 1114, 1829, 1984, 2490
Hpy8I	GTNNAC	6 cut(s)	43, 75, 295, 680, 1047, 1645
Hpy99I	CGWCG	2 cut(s)	299, 681
HpyAV	CCTTC	8 cut(s)	208, 804, 880, 1006, 2099, 2209, 2497, 2536
HpyCH4III	ACNGT	7 cut(s)	79, 250, 337, 355, 1028, 1051, 2261
HpyCH4IV	ACGT	5 cut(s)	71, 297, 399, 1043, 1896
HpyF10VI	GCNNNNNNNGC	4 cut(s)	926, 1253, 1374, 1909
HpySE526I	ACGT	5 cut(s)	71, 297, 399, 1043, 1896
Kpn2I	TCCGGA	3 cut(s)	256, 319, 2489
Kzo9I	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
LmnI	GCTCC	5 cut(s)	328, 666, 821, 2304, 2392
Lsp1109I	GCAGC	2 cut(s)	548, 2261
LweI	GCATC	3 cut(s)	37, 1822, 2145
MaeI	CTAG	8 cut(s)	720, 968, 1253, 1365, 1574, 1640, 2313, 2513
MaeII	ACGT	5 cut(s)	71, 297, 399, 1043, 1896
MaeIII	GTNAC	5 cut(s)	430, 656, 890, 1804, 2149
MalI	GATC	7 cut(s)	318, 503, 909, 948, 1152, 1161, 1739
MboI	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
MflI	RGATCY	2 cut(s)	1159, 1737
MhlI	GDGCHC	3 cut(s)	189, 826, 2085
MlyI	GAGTC	2 cut(s)	427, 2348
MmeI	TCCRAC	3 cut(s)	1364, 2019, 2269
Mph1103I	ATGCAT	2 cut(s)	30, 733
MroI	TCCGGA	3 cut(s)	256, 319, 2489
MroXI	GAANNNNTTC	2 cut(s)	207, 2048
MseI	TTAA	5 cut(s)	63, 624, 2364, 2463, 2560
MslI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
MspA1I	CMGCKG	1 cut(s)	314
MspI	CCGG	7 cut(s)	257, 269, 320, 849, 1095, 1594, 2490
MspR9I	CCNGG	2 cut(s)	218, 2519
Mva1269I	GAATGC	1 cut(s)	2115
MvaI	CCWGG	2 cut(s)	218, 2519
MvnI	CGCG	1 cut(s)	783
MwoI	GCNNNNNNNGC	4 cut(s)	926, 1253, 1374, 1909
NcoI	CCATGG	1 cut(s)	366
NdeII	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
NheI	GCTAGC	4 cut(s)	967, 1252, 1364, 1573
NlaIV	GGNNCC	6 cut(s)	330, 1297, 1435, 1613, 2227, 2394
NmeAIII	GCCGAG	2 cut(s)	208, 901
NmuCI	GTSAC	4 cut(s)	430, 656, 890, 2149
NruI	TCGCGA	1 cut(s)	783
NsiI	ATGCAT	2 cut(s)	30, 733
NspI	RCATGY	3 cut(s)	448, 760, 898
NspV	TTCGAA	1 cut(s)	201
OliI	CACNNNNGTG	1 cut(s)	1609
PaeI	GCATGC	1 cut(s)	448
PceI	AGGCCT	1 cut(s)	1414
PciI	ACATGT	1 cut(s)	894
PctI	GAATGC	1 cut(s)	2115
PdmI	GAANNNNTTC	2 cut(s)	207, 2048
PfeI	GAWTC	1 cut(s)	478
PflMI	CCANNNNNTGG	1 cut(s)	1270
PfoI	TCCNGGA	1 cut(s)	2517
PkrI	GCNGC	3 cut(s)	181, 538, 2251
PleI	GAGTC	2 cut(s)	427, 2348
PmaCI	CACGTG	1 cut(s)	400
PmlI	CACGTG	1 cut(s)	400
PpsI	GAGTC	2 cut(s)	427, 2348
Ppu21I	YACGTR	1 cut(s)	400
PscI	ACATGT	1 cut(s)	894
PshAI	GACNNNNGTC	1 cut(s)	2130
PshBI	ATTAAT	1 cut(s)	63
PsiI	TTATAA	1 cut(s)	1917
Psp124BI	GAGCTC	2 cut(s)	189, 826
Psp6I	CCWGG	2 cut(s)	216, 2517
PspCI	CACGTG	1 cut(s)	400
PspGI	CCWGG	2 cut(s)	216, 2517
PspN4I	GGNNCC	6 cut(s)	330, 1297, 1435, 1613, 2227, 2394
PspPI	GGNCC	6 cut(s)	234, 1082, 1187, 1459, 2226, 2236
PsrI	GAACNNNNNNTAC	2 cut(s)	2293, 2325
PstI	CTGCAG	1 cut(s)	292
PsuI	RGATCY	2 cut(s)	1159, 1737
RruI	TCGCGA	1 cut(s)	783
RsaI	GTAC	5 cut(s)	574, 1099, 1282, 1511, 1661
RsaNI	GTAC	5 cut(s)	573, 1098, 1281, 1510, 1660
RseI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
SacI	GAGCTC	2 cut(s)	189, 826
SalI	GTCGAC	2 cut(s)	293, 678
SaqAI	TTAA	5 cut(s)	63, 624, 2364, 2463, 2560
SatI	GCNGC	3 cut(s)	180, 537, 2250
Sau3AI	GATC	7 cut(s)	316, 501, 907, 946, 1150, 1159, 1737
Sau96I	GGNCC	6 cut(s)	234, 1082, 1187, 1459, 2226, 2236
ScaI	AGTACT	1 cut(s)	1511
SchI	GAGTC	2 cut(s)	427, 2348
ScrFI	CCNGG	2 cut(s)	218, 2519
SduI	GDGCHC	3 cut(s)	189, 826, 2085
SfaNI	GCATC	3 cut(s)	37, 1822, 2145
SfcI	CTRYAG	4 cut(s)	115, 288, 1335, 2166
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	3 cut(s)	1187, 1459, 2226
SmiMI	CAYNNNNRTG	3 cut(s)	226, 1609, 1818
SmlI	CTYRAG	1 cut(s)	1907
SmoI	CTYRAG	1 cut(s)	1907
SphI	GCATGC	1 cut(s)	448
SseBI	AGGCCT	1 cut(s)	1414
SsiI	CCGC	7 cut(s)	179, 312, 420, 690, 2078, 2322, 2459
SspMI	CTAG	8 cut(s)	720, 968, 1253, 1365, 1574, 1640, 2313, 2513
SstI	GAGCTC	2 cut(s)	189, 826
StuI	AGGCCT	1 cut(s)	1414
StyD4I	CCNGG	2 cut(s)	216, 2517
StyI	CCWWGG	3 cut(s)	366, 1409, 1462
TaaI	ACNGT	7 cut(s)	79, 250, 337, 355, 1028, 1051, 2261
TaiI	ACGT	5 cut(s)	74, 300, 402, 1046, 1899
TaqI	TCGA	6 cut(s)	67, 201, 244, 294, 375, 679
TaqII	GACCGA	1 cut(s)	79
TatI	WGTACW	1 cut(s)	1509
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	5 cut(s)	63, 624, 2364, 2463, 2560
Tru9I	TTAA	5 cut(s)	63, 624, 2364, 2463, 2560
TscAI	CASTG	6 cut(s)	358, 479, 667, 699, 1398, 1435
TseFI	GTSAC	4 cut(s)	430, 656, 890, 2149
TseI	GCWGC	2 cut(s)	536, 2249
Tsp45I	GTSAC	4 cut(s)	430, 656, 890, 2149
TspGWI	ACGGA	1 cut(s)	1763
TspRI	CASTG	6 cut(s)	358, 479, 667, 699, 1398, 1435
Van91I	CCANNNNNTGG	1 cut(s)	1270
VpaK11BI	GGWCC	3 cut(s)	1187, 1459, 2226
VspI	ATTAAT	1 cut(s)	63
XagI	CCTNNNNNAGG	1 cut(s)	1145
XapI	RAATTY	5 cut(s)	715, 992, 1387, 1675, 1847
XceI	RCATGY	3 cut(s)	448, 760, 898
XmiI	GTMKAC	3 cut(s)	74, 294, 679
XmnI	GAANNNNTTC	2 cut(s)	207, 2048
XspI	CTAG	8 cut(s)	720, 968, 1253, 1365, 1574, 1640, 2313, 2513
ZrmI	AGTACT	1 cut(s)	1511
Zsp2I	ATGCAT	2 cut(s)	30, 733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.