threonine-tRNA ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17960 AT1G17960 |
| malus_domestica | MD15G1401700.v1.1 MD15G1402000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0444231 |
| rosa_laevigata | RLG00000005339 RLG00000005847 RLG00000008520 RLG00000020302 |
| rosa_multiflora | Rmu_sc0000016.1_g000006 Rmu_sc0000987.1_g000022 Rmu_sc0014698.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00219500 Rroxscaffold_5G00384800 |
| rosa_rugosa | Rorug03G0334500 Rorug07G0196800 |
| rosa_samantha | Rh1BG152700 Rh1CG027000 Rh1DG185100 Rh2BG464200 Rh4AG158400 Rh4BG163900 Rh4CG184100 Rh4DG152900 Rh4DG153000 Rh5CG279500 Rh6BG190300 Rh7CG027100 Rh7DG026600 Rh7DG335900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 24 |
| AgsI | TTSAA | 1 cut(s) | 91 |
| AluBI | AGCT | 2 cut(s) | 133, 194 |
| AluI | AGCT | 2 cut(s) | 133, 194 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| Ama87I | CYCGRG | 1 cut(s) | 216 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| AspS9I | GGNCC | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 2 cut(s) | 164, 165 |
| AvaI | CYCGRG | 1 cut(s) | 216 |
| AvaII | GGWCC | 1 cut(s) | 56 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 1 cut(s) | 35 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| Bme18I | GGWCC | 1 cut(s) | 56 |
| BmeT110I | CYCGRG | 1 cut(s) | 216 |
| BmgT120I | GGNCC | 1 cut(s) | 56 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BsaBI | GATNNNNATC | 1 cut(s) | 68 |
| Bse8I | GATNNNNATC | 1 cut(s) | 68 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseJI | GATNNNNATC | 1 cut(s) | 68 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BsiHKCI | CYCGRG | 1 cut(s) | 216 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| BsoBI | CYCGRG | 1 cut(s) | 216 |
| Bsp1407I | TGTACA | 1 cut(s) | 22 |
| BspCNI | CTCAG | 1 cut(s) | 155 |
| BsrGI | TGTACA | 1 cut(s) | 22 |
| BstAUI | TGTACA | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 2 cut(s) | 117, 124 |
| BstDEI | CTNAG | 1 cut(s) | 142 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| BtsIMutI | CAGTG | 1 cut(s) | 79 |
| Cac8I | GCNNGC | 2 cut(s) | 117, 124 |
| Cfr13I | GGNCC | 1 cut(s) | 56 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CviAII | CATG | 2 cut(s) | 20, 94 |
| CviJI | RGCY | 3 cut(s) | 115, 133, 194 |
| CviKI_1 | RGCY | 3 cut(s) | 115, 133, 194 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DdeI | CTNAG | 1 cut(s) | 142 |
| Eco32I | GATATC | 1 cut(s) | 70 |
| Eco47I | GGWCC | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 216 |
| EcoRV | GATATC | 1 cut(s) | 70 |
| EcoT22I | ATGCAT | 1 cut(s) | 88 |
| FaeI | CATG | 2 cut(s) | 23, 97 |
| FaiI | YATR | 5 cut(s) | 21, 54, 95, 182, 225 |
| FatI | CATG | 2 cut(s) | 19, 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| GluI | GCNGC | 1 cut(s) | 120 |
| Hin1II | CATG | 2 cut(s) | 23, 97 |
| HinfI | GANTC | 2 cut(s) | 170, 214 |
| HphI | GGTGA | 2 cut(s) | 164, 165 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| HpyAV | CCTTC | 2 cut(s) | 29, 152 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 86 |
| HpyF3I | CTNAG | 1 cut(s) | 142 |
| Hsp92II | CATG | 2 cut(s) | 23, 97 |
| LpnPI | CCDG | 2 cut(s) | 129, 189 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeIII | GTNAC | 2 cut(s) | 99, 171 |
| MboII | GAAGA | 1 cut(s) | 167 |
| MlyI | GAGTC | 2 cut(s) | 179, 208 |
| MnlI | CCTC | 2 cut(s) | 142, 159 |
| Mph1103I | ATGCAT | 1 cut(s) | 88 |
| MseI | TTAA | 1 cut(s) | 229 |
| NlaIII | CATG | 2 cut(s) | 23, 97 |
| NmuCI | GTSAC | 2 cut(s) | 99, 171 |
| NsiI | ATGCAT | 1 cut(s) | 88 |
| PaeR7I | CTCGAG | 1 cut(s) | 216 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| PleI | GAGTC | 2 cut(s) | 178, 208 |
| PpsI | GAGTC | 2 cut(s) | 178, 208 |
| PspPI | GGNCC | 1 cut(s) | 56 |
| PspXI | VCTCGAGB | 1 cut(s) | 216 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| SaqAI | TTAA | 1 cut(s) | 229 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau96I | GGNCC | 1 cut(s) | 56 |
| SchI | GAGTC | 2 cut(s) | 179, 208 |
| SetI | ASST | 3 cut(s) | 135, 178, 196 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| Sfr274I | CTCGAG | 1 cut(s) | 216 |
| SgeI | CNNG | 8 cut(s) | 32, 106, 116, 128, 135, 175, 188, 223 |
| SinI | GGWCC | 1 cut(s) | 56 |
| SlaI | CTCGAG | 1 cut(s) | 216 |
| SmlI | CTYRAG | 1 cut(s) | 216 |
| SmoI | CTYRAG | 1 cut(s) | 216 |
| TaqI | TCGA | 2 cut(s) | 210, 217 |
| TatI | WGTACW | 1 cut(s) | 22 |
| Tru1I | TTAA | 1 cut(s) | 229 |
| Tru9I | TTAA | 1 cut(s) | 229 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TseFI | GTSAC | 2 cut(s) | 99, 171 |
| TseI | GCWGC | 1 cut(s) | 119 |
| Tsp45I | GTSAC | 2 cut(s) | 99, 171 |
| TspDTI | ATGAA | 2 cut(s) | 48, 110 |
| TspRI | CASTG | 1 cut(s) | 79 |
| VpaK11BI | GGWCC | 1 cut(s) | 56 |
| XhoI | CTCGAG | 1 cut(s) | 216 |
| Zsp2I | ATGCAT | 1 cut(s) | 88 |