AT1G63610

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003449
Physical Location & Seq
Reverse (-)
23583196 .. 23585784
2589 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G63610.2

Sequence Viewer

Length: 1023 bp
ATGTGTTCGTTATCAATGCAATTCTCGCTCTTGCAATCACCACCATCTCGTCCTTGTCCGTCTTTTTTAGCCAACCATGAACCTAAACTCTCTACTACTTCCTCCTCTGTGACCTTCCCCTTGAAGACGAACACTTGGAAGTGTAGCGGAACTGGGAATTTGTTGGTTTTGAGAGTTAAAGCTTATGGTTCTTCTTCTGATTCCTCTGCAGATTCCTCCACGCCTCCCAATGGCACTCGGCAGCCCAAAAGCAGAAGGGATATTCTACTGGAGTATGTTCAGAATGTGAAGCCAGAGTTCATGGAGATGTTCGTTAAACGTGCCCCTAAACATGTGGTTGAAGCAATGAGACAAACTGTGACGAATATGATTGGAACGCTGCCACCGCAGTTTTTCGCCGTTACTGTCACCTCTGTTGCTGAGAACCTTGCACAGCTGATGATGAGCGTGTTGATGACTGGATATATGTTTAGAAACGCTCAATATCGTCTTGAATTGCAACAAAGTTTGGAGCAGGTTGCTCTTCCTGAACCACGTGATCAAAAGGGGGGTGATGAAGACTATGCACCAGGAACTCAAAAGAATGTTTCTGGGGAAGTGATCAGGTGGAATAACGTATCTGGCCCTGAGAAAATTGATGCAAAAAAGTATATCGAGCTTCTGGAAGCAGAGATCGAAGAACTCAACCGTCAAGTGGGGAGAAAATCAGCGAATCAGCAGAATGAAATCTTGGAGTATCTAAAATCTCTCGAACCTCAAAATCTCAAGGAGCTTACAAGCACTGCAGGCGAAGATGTTGCCGTAGCCATGAATACATTTGTCAAGAGGCTTCTAGCTGTGTCAGACCCTAACCAAATGAAGACGAATGTGACAGAGACAAGCGCAGCGGACCTTGCAAAATTGTTGTATTGGTTAATGGTAGTTGGATATAGCATTCGCAATATCGAGGTTCGGTTTGATATGGAACGCGTGCTTGGTACTCAACCGAAGCTTGCAGAGCTGCCTCCTGGTGAAATTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

340

Amino Acids

37.96

Weight (kDa)

6.26

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 89 - 170 1.3e-24 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 505
AccII CGCG 1 cut(s) 969
AciI CCGC 3 cut(s) 147, 386, 887
AcsI RAATTY 1 cut(s) 157
AcvI CACGTG 1 cut(s) 536
AfaI GTAC 1 cut(s) 979
AfiI CCNNNNNNNGG 2 cut(s) 230, 694
AflIII ACRYGT 2 cut(s) 331, 967
AgsI TTSAA 3 cut(s) 124, 341, 494
AjnI CCWGG 2 cut(s) 568, 1006
AjuI GAANNNNNNNTTGG 4 cut(s) 713, 745, 957, 989
AluBI AGCT 7 cut(s) 182, 436, 658, 772, 836, 991, 1000
AluI AGCT 7 cut(s) 182, 436, 658, 772, 836, 991, 1000
Alw26I GTCTC 2 cut(s) 343, 869
AoxI GGCC 1 cut(s) 622
ApeKI GCWGC 4 cut(s) 241, 379, 884, 1000
ApoI RAATTY 1 cut(s) 157
AspLEI GCGC 1 cut(s) 884
AspS9I GGNCC 2 cut(s) 623, 889
AsuHPI GGTGA 4 cut(s) 30, 400, 563, 1022
AvaII GGWCC 1 cut(s) 889
BaeGI GKGCMC 1 cut(s) 325
BbrPI CACGTG 1 cut(s) 536
BbsI GAAGAC 3 cut(s) 131, 564, 866
BbvI GCAGC 4 cut(s) 253, 366, 896, 987
BccI CCATC 1 cut(s) 52
BceAI ACGGC 2 cut(s) 383, 785
BcgI CGANNNNNNTGC 2 cut(s) 779, 813
BciT130I CCWGG 2 cut(s) 570, 1008
BclI TGATCA 2 cut(s) 538, 600
BcoDI GTCTC 2 cut(s) 343, 869
BfaI CTAG 1 cut(s) 833
BfmI CTRYAG 2 cut(s) 207, 783
BfuAI ACCTGC 1 cut(s) 505
BisI GCNGC 4 cut(s) 242, 380, 885, 1001
BlsI GCNGC 4 cut(s) 243, 381, 886, 1002
Bme1390I CCNGG 2 cut(s) 570, 1008
Bme18I GGWCC 1 cut(s) 889
BmgT120I GGNCC 2 cut(s) 623, 889
BmrFI CCNGG 2 cut(s) 570, 1008
BmrI ACTGGG 1 cut(s) 162
BmsI GCATC 1 cut(s) 628
BmuI ACTGGG 1 cut(s) 162
BpiI GAAGAC 3 cut(s) 131, 564, 866
BpmI CTGGAG 1 cut(s) 290
BpuEI CTTGAG 1 cut(s) 749
BsaAI YACGTR 1 cut(s) 536
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 694
Bse1I ACTGG 3 cut(s) 157, 273, 463
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 2 cut(s) 570, 1008
BseLI CCNNNNNNNGG 2 cut(s) 230, 694
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 2 cut(s) 411, 618
BseNI ACTGG 3 cut(s) 157, 273, 463
BseRI GAGGAG 1 cut(s) 94
BseSI GKGCMC 1 cut(s) 325
BseXI GCAGC 4 cut(s) 253, 366, 896, 987
Bsh1236I CGCG 1 cut(s) 969
BshFI GGCC 1 cut(s) 624
BslI CCNNNNNNNGG 2 cut(s) 230, 694
BsmAI GTCTC 2 cut(s) 343, 869
BsmI GAATGC 1 cut(s) 933
BsnI GGCC 1 cut(s) 624
Bsp1286I GDGCHC 1 cut(s) 325
Bsp143I GATC 3 cut(s) 538, 600, 672
BspACI CCGC 3 cut(s) 147, 386, 887
BspANI GGCC 1 cut(s) 624
BspCNI CTCAG 2 cut(s) 412, 619
BspFNI CGCG 1 cut(s) 969
BspMAI CTGCAG 2 cut(s) 211, 787
BspMI ACCTGC 1 cut(s) 505
BspQI GCTCTTC 1 cut(s) 528
BsrDI GCAATG 1 cut(s) 351
BsrI ACTGG 3 cut(s) 157, 273, 463
BssMI GATC 3 cut(s) 538, 600, 672
Bst2UI CCWGG 2 cut(s) 570, 1008
Bst4CI ACNGT 3 cut(s) 358, 406, 689
Bst6I CTCTTC 1 cut(s) 528
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 3 cut(s) 787, 971, 993
BstDEI CTNAG 2 cut(s) 420, 627
BstFNI CGCG 1 cut(s) 969
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 3 cut(s) 541, 603, 675
BstMAI GTCTC 2 cut(s) 343, 869
BstMBI GATC 3 cut(s) 538, 600, 672
BstMWI GCNNNNNNNGC 5 cut(s) 25, 385, 786, 893, 997
BstNI CCWGG 2 cut(s) 570, 1008
BstNSI RCATGY 1 cut(s) 335
BstSCI CCNGG 2 cut(s) 568, 1006
BstSFI CTRYAG 2 cut(s) 207, 783
BstSLI GKGCMC 1 cut(s) 325
BstUI CGCG 1 cut(s) 969
BstV1I GCAGC 4 cut(s) 253, 366, 896, 987
BstV2I GAAGAC 3 cut(s) 131, 564, 866
BsuRI GGCC 1 cut(s) 624
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 1 cut(s) 780
BveI ACCTGC 1 cut(s) 505
Cac8I GCNNGC 3 cut(s) 787, 971, 993
CfoI GCGC 1 cut(s) 884
Cfr13I GGNCC 2 cut(s) 623, 889
Csp6I GTAC 1 cut(s) 978
CviAII CATG 4 cut(s) 77, 301, 332, 808
CviQI GTAC 1 cut(s) 978
DdeI CTNAG 2 cut(s) 420, 627
DpnI GATC 3 cut(s) 540, 602, 674
DpnII GATC 3 cut(s) 538, 600, 672
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Eco47I GGWCC 1 cut(s) 889
Eco72I CACGTG 1 cut(s) 536
EcoRII CCWGG 2 cut(s) 568, 1006
FaeI CATG 4 cut(s) 80, 304, 335, 811
FatI CATG 4 cut(s) 76, 300, 331, 807
FbaI TGATCA 2 cut(s) 538, 600
Fnu4HI GCNGC 4 cut(s) 242, 380, 885, 1001
Fsp4HI GCNGC 4 cut(s) 242, 380, 885, 1001
FspBI CTAG 1 cut(s) 833
GlaI GCGC 1 cut(s) 883
GluI GCNGC 4 cut(s) 242, 380, 885, 1001
GsuI CTGGAG 1 cut(s) 290
HaeIII GGCC 1 cut(s) 624
HhaI GCGC 1 cut(s) 884
Hin1II CATG 4 cut(s) 80, 304, 335, 811
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HindIII AAGCTT 2 cut(s) 180, 989
HinfI GANTC 3 cut(s) 200, 212, 712
HphI GGTGA 4 cut(s) 30, 400, 563, 1022
Hpy188I TCNGA 3 cut(s) 199, 282, 844
Hpy188III TCNNGA 5 cut(s) 491, 527, 662, 749, 823
HpyAV CCTTC 2 cut(s) 124, 249
HpyCH4III ACNGT 3 cut(s) 358, 406, 689
HpyCH4IV ACGT 3 cut(s) 319, 535, 615
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 385, 786, 893, 997
HpyF3I CTNAG 2 cut(s) 420, 627
HpySE526I ACGT 3 cut(s) 319, 535, 615
Hsp92II CATG 4 cut(s) 80, 304, 335, 811
HspAI GCGC 1 cut(s) 882
Ksp22I TGATCA 2 cut(s) 538, 600
Kzo9I GATC 3 cut(s) 538, 600, 672
LguI GCTCTTC 1 cut(s) 528
LmnI GCTCC 2 cut(s) 511, 769
Lsp1109I GCAGC 4 cut(s) 253, 366, 896, 987
LweI GCATC 1 cut(s) 628
MaeI CTAG 1 cut(s) 833
MaeII ACGT 3 cut(s) 319, 535, 615
MaeIII GTNAC 5 cut(s) 109, 358, 400, 406, 868
MalI GATC 3 cut(s) 540, 602, 674
MboI GATC 3 cut(s) 538, 600, 672
MboII GAAGA 8 cut(s) 136, 183, 186, 515, 569, 689, 803, 871
MhlI GDGCHC 1 cut(s) 325
MluCI AATT 6 cut(s) 20, 157, 494, 633, 899, 1014
MluI ACGCGT 1 cut(s) 967
MmeI TCCRAC 1 cut(s) 904
MseI TTAA 3 cut(s) 177, 315, 914
MslI CAYNNNNRTG 1 cut(s) 305
MspA1I CMGCKG 2 cut(s) 436, 887
MspR9I CCNGG 2 cut(s) 570, 1008
Mva1269I GAATGC 1 cut(s) 933
MvaI CCWGG 2 cut(s) 570, 1008
MvnI CGCG 1 cut(s) 969
MwoI GCNNNNNNNGC 5 cut(s) 25, 385, 786, 893, 997
NdeII GATC 3 cut(s) 538, 600, 672
NlaIII CATG 4 cut(s) 80, 304, 335, 811
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 4 cut(s) 109, 358, 406, 868
NspI RCATGY 1 cut(s) 335
PciI ACATGT 1 cut(s) 331
PciSI GCTCTTC 1 cut(s) 528
PctI GAATGC 1 cut(s) 933
PfeI GAWTC 3 cut(s) 200, 212, 712
PkrI GCNGC 4 cut(s) 243, 381, 886, 1002
PmaCI CACGTG 1 cut(s) 536
PmlI CACGTG 1 cut(s) 536
Ppu21I YACGTR 1 cut(s) 536
PscI ACATGT 1 cut(s) 331
Psp6I CCWGG 2 cut(s) 568, 1006
PspCI CACGTG 1 cut(s) 536
PspGI CCWGG 2 cut(s) 568, 1006
PspPI GGNCC 2 cut(s) 623, 889
PstI CTGCAG 2 cut(s) 211, 787
PvuII CAGCTG 1 cut(s) 436
RsaI GTAC 1 cut(s) 979
RsaNI GTAC 1 cut(s) 978
RseI CAYNNNNRTG 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 528
SaqAI TTAA 3 cut(s) 177, 315, 914
SatI GCNGC 4 cut(s) 242, 380, 885, 1001
Sau3AI GATC 3 cut(s) 538, 600, 672
Sau96I GGNCC 2 cut(s) 623, 889
ScrFI CCNGG 2 cut(s) 570, 1008
SduI GDGCHC 1 cut(s) 325
SfaNI GCATC 1 cut(s) 628
SfcI CTRYAG 2 cut(s) 207, 783
SinI GGWCC 1 cut(s) 889
SmiMI CAYNNNNRTG 1 cut(s) 305
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
Sse9I AATT 6 cut(s) 20, 157, 494, 633, 899, 1014
SsiI CCGC 3 cut(s) 147, 386, 887
SspMI CTAG 1 cut(s) 833
StyD4I CCNGG 2 cut(s) 568, 1006
TaaI ACNGT 3 cut(s) 358, 406, 689
TaiI ACGT 3 cut(s) 322, 538, 618
TaqI TCGA 4 cut(s) 654, 675, 750, 945
TasI AATT 6 cut(s) 20, 157, 494, 633, 899, 1014
TfiI GAWTC 3 cut(s) 200, 212, 712
Tru1I TTAA 3 cut(s) 177, 315, 914
Tru9I TTAA 3 cut(s) 177, 315, 914
TscAI CASTG 1 cut(s) 787
TseFI GTSAC 4 cut(s) 109, 358, 406, 868
TseI GCWGC 4 cut(s) 241, 379, 884, 1000
Tsp45I GTSAC 4 cut(s) 109, 358, 406, 868
TspDTI ATGAA 6 cut(s) 93, 289, 570, 738, 824, 872
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 1 cut(s) 787
VpaK11BI GGWCC 1 cut(s) 889
XapI RAATTY 1 cut(s) 157
XceI RCATGY 1 cut(s) 335
XspI CTAG 1 cut(s) 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.