RchiOBHm_Chr5g0060651

Protein of unknown function (DUF760)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
65836856 .. 65839741
2886 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33708

Sequence Viewer

Length: 1032 bp
ATGTATTCCTTGACGGTGAAGCCCTCTTGTCTCCTTGTACCAAAATCTTCTTCTTCATCTGCTCATTCTTGGGTTGGGTCTTCTTCTTCTACAGTTAGTTTCCCAATAAAGACCAAAAGCAGGGGCAGCAGAATCAGTTTGAGAATTGCGGCTTACGATTCTTCCAAGAACAACGATGGGCTCAACTCCGGTGATTCCAAACCTCCCAACGGCACTGTGCCAAAGAGCAGGAGGGATATACTATTGGAGTATGTAAAAAATGTGCAGCCTGAATTTATGGAGCTGCTTGTAAAGAGAGCACCCCACCCCAGCAGGTATTTATTTATTTATGTCTTTTTGGCAAGCAGCCGCGCGATTTTAATGTTGATGAGGAGGATAACTTACTTGCTCGTGCAAGGATTGAGAGTTGCCGAAAATCTTGCACAACTTATGTACAGTATCATGATGACTGGATATATGTTTCAAAATGCACAGTACAGGTTGGAACTGCAGCAAAGTTTAGAGCCAGTTGCTCTTCCCCAAGGGCAAGAGAAAAAACCTGATCCTAGAAGCATTGATGCACCAGAGTATGCACCTGGTACACAGAAGTCGAATGTGTCAGGGGAAGTTATTAGGTGGAATAATGTTTCTGGCCCTGAGAAAATAGATGCTAAGAAGTACATAGAGTTACTTGAAGCAGAGATTGAGGAATTGAATAATGAAGTTGGTAGGAAATCTGCAAATGGACAAAATGAATTGTTGGAGTATCTCAAGTCTCTCGAGCCCCAAAATTTAAAGGAGTTGACTAGTACTGCTGGAGATGATGTTGTGGTTGCAATGGATACATTCATCAAGCGGCTTTTGGCTGTTTCAGATCCTAGCCAAATGAAGGCTAGTGTAACATCAACAACTGCAGCAGAACTTGCAAAGCTGCTTTATTGGCTAATGGTAGTCGGATATAGTCTTCGCAACATTGAAGTTCGTTTTGATATGGAACGAGTACTTGGGAATCCTCCAAAGCTCGCAGAATTGCCTCCAGGTGAAAATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

343

Amino Acids

38.24

Weight (kDa)

8.89

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 137 - 167 2.8e-07 Protein of unknown function (DUF760)
DUF760 PF05542 245 - 328 2.8e-20 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 303
AccII CGCG 2 cut(s) 351, 353
AciI CCGC 3 cut(s) 149, 349, 835
AclWI GGATC 2 cut(s) 536, 848
AcsI RAATTY 2 cut(s) 272, 769
AfaI GTAC 7 cut(s) 39, 434, 476, 580, 659, 790, 981
AfiI CCNNNNNNNGG 3 cut(s) 120, 209, 868
AgsI TTSAA 4 cut(s) 464, 674, 694, 956
AhlI ACTAGT 1 cut(s) 785
AjnI CCWGG 2 cut(s) 574, 1015
AjuI GAANNNNNNNTTGG 4 cut(s) 34, 66, 966, 998
AluBI AGCT 3 cut(s) 283, 910, 1000
AluI AGCT 3 cut(s) 283, 910, 1000
Alw21I GWGCWC 1 cut(s) 301
Alw26I GTCTC 2 cut(s) 35, 759
AlwI GGATC 2 cut(s) 536, 848
Ama87I CYCGRG 1 cut(s) 758
AoxI GGCC 1 cut(s) 631
ApeKI GCWGC 7 cut(s) 126, 265, 283, 345, 490, 893, 910
ApoI RAATTY 2 cut(s) 272, 769
AspLEI GCGC 1 cut(s) 353
AspS9I GGNCC 1 cut(s) 632
AsuHPI GGTGA 3 cut(s) 28, 203, 1031
AvaI CYCGRG 1 cut(s) 758
BanII GRGCYC 2 cut(s) 183, 765
BauI CACGAG 1 cut(s) 389
BbsI GAAGAC 2 cut(s) 72, 935
Bbv12I GWGCWC 1 cut(s) 301
BbvI GCAGC 7 cut(s) 138, 270, 277, 357, 502, 897, 905
BccI CCATC 1 cut(s) 170
BceAI ACGGC 1 cut(s) 226
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 2 cut(s) 576, 1017
BciVI GTATCC 1 cut(s) 814
BcoDI GTCTC 2 cut(s) 35, 759
BcuI ACTAGT 1 cut(s) 785
BfaI CTAG 4 cut(s) 546, 786, 858, 873
BfmI CTRYAG 3 cut(s) 90, 488, 891
BfuAI ACCTGC 1 cut(s) 303
BfuI GTATCC 1 cut(s) 814
BmcAI AGTACT 2 cut(s) 790, 981
Bme1390I CCNGG 2 cut(s) 576, 1017
BmeT110I CYCGRG 1 cut(s) 758
BmgT120I GGNCC 1 cut(s) 632
BmrFI CCNGG 2 cut(s) 576, 1017
BmsI GCATC 2 cut(s) 547, 637
BpiI GAAGAC 2 cut(s) 72, 935
BpmI CTGGAG 2 cut(s) 816, 999
BpuEI CTTGAG 1 cut(s) 734
BsaJI CCNNGG 1 cut(s) 520
BsaWI WCCGGW 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 789, 819
Bsc4I CCNNNNNNNGG 3 cut(s) 120, 209, 868
Bse1I ACTGG 2 cut(s) 454, 506
Bse3DI GCAATG 1 cut(s) 822
BseBI CCWGG 2 cut(s) 576, 1017
BseDI CCNNGG 1 cut(s) 520
BseLI CCNNNNNNNGG 3 cut(s) 120, 209, 868
BseMI GCAATG 1 cut(s) 822
BseMII CTCAG 1 cut(s) 627
BseNI ACTGG 2 cut(s) 454, 506
BseRI GAGGAG 1 cut(s) 385
BseXI GCAGC 7 cut(s) 138, 270, 277, 357, 502, 897, 905
BseYI CCCAGC 1 cut(s) 308
BsgI GTGCAG 1 cut(s) 284
Bsh1236I CGCG 2 cut(s) 351, 353
BshFI GGCC 1 cut(s) 633
BsiHKAI GWGCWC 1 cut(s) 301
BsiHKCI CYCGRG 1 cut(s) 758
BsiSI CCGG 1 cut(s) 189
BslI CCNNNNNNNGG 3 cut(s) 120, 209, 868
BsmAI GTCTC 2 cut(s) 35, 759
BsnI GGCC 1 cut(s) 633
BsoBI CYCGRG 1 cut(s) 758
Bsp1286I GDGCHC 3 cut(s) 183, 301, 765
Bsp1407I TGTACA 1 cut(s) 432
Bsp143I GATC 2 cut(s) 541, 853
BspACI CCGC 3 cut(s) 149, 349, 835
BspANI GGCC 1 cut(s) 633
BspCNI CTCAG 1 cut(s) 628
BspFNI CGCG 2 cut(s) 351, 353
BspHI TCATGA 1 cut(s) 441
BspMAI CTGCAG 2 cut(s) 492, 895
BspMI ACCTGC 1 cut(s) 303
BspPI GGATC 2 cut(s) 536, 848
BspQI GCTCTTC 1 cut(s) 519
BsrDI GCAATG 1 cut(s) 822
BsrGI TGTACA 1 cut(s) 432
BsrI ACTGG 2 cut(s) 454, 506
BssECI CCNNGG 1 cut(s) 520
BssMI GATC 2 cut(s) 541, 853
BssSI CACGAG 1 cut(s) 389
BssT1I CCWWGG 1 cut(s) 520
Bst2BI CACGAG 1 cut(s) 389
Bst2UI CCWGG 2 cut(s) 576, 1017
Bst4CI ACNGT 5 cut(s) 16, 94, 217, 437, 474
Bst6I CTCTTC 1 cut(s) 519
BstAPI GCANNNNNTGC 1 cut(s) 902
BstAUI TGTACA 1 cut(s) 432
BstC8I GCNNGC 2 cut(s) 343, 1002
BstDEI CTNAG 2 cut(s) 636, 651
BstFNI CGCG 2 cut(s) 351, 353
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 2 cut(s) 544, 856
BstMAI GTCTC 2 cut(s) 35, 759
BstMBI GATC 2 cut(s) 541, 853
BstMWI GCNNNNNNNGC 3 cut(s) 126, 902, 919
BstNI CCWGG 2 cut(s) 576, 1017
BstSCI CCNGG 2 cut(s) 574, 1015
BstSFI CTRYAG 3 cut(s) 90, 488, 891
BstUI CGCG 2 cut(s) 351, 353
BstV1I GCAGC 7 cut(s) 138, 270, 277, 357, 502, 897, 905
BstV2I GAAGAC 2 cut(s) 72, 935
BstX2I RGATCY 1 cut(s) 853
BstYI RGATCY 1 cut(s) 853
BsuI GTATCC 1 cut(s) 814
BsuRI GGCC 1 cut(s) 633
BtsIMutI CAGTG 1 cut(s) 213
BveI ACCTGC 1 cut(s) 303
Cac8I GCNNGC 2 cut(s) 343, 1002
CciI TCATGA 1 cut(s) 441
CfoI GCGC 1 cut(s) 353
Cfr13I GGNCC 1 cut(s) 632
CsiI ACCWGGT 1 cut(s) 574
Csp6I GTAC 7 cut(s) 38, 433, 475, 579, 658, 789, 980
CviAII CATG 1 cut(s) 442
CviQI GTAC 7 cut(s) 38, 433, 475, 579, 658, 789, 980
DdeI CTNAG 2 cut(s) 636, 651
DpnI GATC 2 cut(s) 543, 855
DpnII GATC 2 cut(s) 541, 853
DraI TTTAAA 1 cut(s) 774
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Eco130I CCWWGG 1 cut(s) 520
Eco24I GRGCYC 2 cut(s) 183, 765
Eco88I CYCGRG 1 cut(s) 758
EcoRII CCWGG 2 cut(s) 574, 1015
EcoT14I CCWWGG 1 cut(s) 520
EcoT38I GRGCYC 2 cut(s) 183, 765
ErhI CCWWGG 1 cut(s) 520
FaeI CATG 1 cut(s) 445
FatI CATG 1 cut(s) 441
FriOI GRGCYC 2 cut(s) 183, 765
FspBI CTAG 4 cut(s) 546, 786, 858, 873
GlaI GCGC 1 cut(s) 352
GsaI CCCAGC 1 cut(s) 312
GsuI CTGGAG 2 cut(s) 816, 999
HaeIII GGCC 1 cut(s) 633
HapII CCGG 1 cut(s) 189
HhaI GCGC 1 cut(s) 353
Hin1II CATG 1 cut(s) 445
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HinfI GANTC 4 cut(s) 132, 158, 194, 988
HpaII CCGG 1 cut(s) 189
HphI GGTGA 3 cut(s) 28, 203, 1031
Hpy166II GTNNAC 2 cut(s) 581, 783
Hpy188I TCNGA 2 cut(s) 853, 935
Hpy188III TCNNGA 2 cut(s) 442, 758
Hpy8I GTNNAC 2 cut(s) 581, 783
HpyAV CCTTC 1 cut(s) 862
HpyCH4III ACNGT 5 cut(s) 16, 94, 217, 437, 474
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 902, 919
HpyF3I CTNAG 2 cut(s) 636, 651
Hsp92II CATG 1 cut(s) 445
HspAI GCGC 1 cut(s) 351
Kzo9I GATC 2 cut(s) 541, 853
LguI GCTCTTC 1 cut(s) 519
LmnI GCTCC 1 cut(s) 280
Lsp1109I GCAGC 7 cut(s) 138, 270, 277, 357, 502, 897, 905
LweI GCATC 2 cut(s) 547, 637
MabI ACCWGGT 1 cut(s) 574
MaeI CTAG 4 cut(s) 546, 786, 858, 873
MaeIII GTNAC 2 cut(s) 666, 877
MalI GATC 2 cut(s) 543, 855
MboI GATC 2 cut(s) 541, 853
MboII GAAGA 9 cut(s) 39, 42, 45, 72, 75, 78, 153, 506, 935
MflI RGATCY 1 cut(s) 853
MhlI GDGCHC 3 cut(s) 183, 301, 765
MluCI AATT 6 cut(s) 144, 272, 689, 734, 769, 1007
MmeI TCCRAC 3 cut(s) 462, 720, 913
MnlI CCTC 8 cut(s) 34, 213, 225, 363, 366, 679, 1002, 1023
MseI TTAA 3 cut(s) 359, 773, 1030
MspI CCGG 1 cut(s) 189
MspR9I CCNGG 2 cut(s) 576, 1017
MvaI CCWGG 2 cut(s) 576, 1017
MvnI CGCG 2 cut(s) 351, 353
MwoI GCNNNNNNNGC 3 cut(s) 126, 902, 919
NdeII GATC 2 cut(s) 541, 853
NlaIII CATG 1 cut(s) 445
PaeR7I CTCGAG 1 cut(s) 758
PagI TCATGA 1 cut(s) 441
PciSI GCTCTTC 1 cut(s) 519
PfeI GAWTC 4 cut(s) 132, 158, 194, 988
Psp6I CCWGG 2 cut(s) 574, 1015
PspFI CCCAGC 1 cut(s) 308
PspGI CCWGG 2 cut(s) 574, 1015
PspPI GGNCC 1 cut(s) 632
PstI CTGCAG 2 cut(s) 492, 895
PsuI RGATCY 1 cut(s) 853
RsaI GTAC 7 cut(s) 39, 434, 476, 580, 659, 790, 981
RsaNI GTAC 7 cut(s) 38, 433, 475, 579, 658, 789, 980
SapI GCTCTTC 1 cut(s) 519
SaqAI TTAA 3 cut(s) 359, 773, 1030
Sau3AI GATC 2 cut(s) 541, 853
Sau96I GGNCC 1 cut(s) 632
ScaI AGTACT 2 cut(s) 790, 981
ScrFI CCNGG 2 cut(s) 576, 1017
SduI GDGCHC 3 cut(s) 183, 301, 765
SexAI ACCWGGT 1 cut(s) 574
SfaNI GCATC 2 cut(s) 547, 637
SfcI CTRYAG 3 cut(s) 90, 488, 891
Sfr274I CTCGAG 1 cut(s) 758
SlaI CTCGAG 1 cut(s) 758
SmlI CTYRAG 2 cut(s) 749, 758
SmoI CTYRAG 2 cut(s) 749, 758
SpeI ACTAGT 1 cut(s) 785
Sse9I AATT 6 cut(s) 144, 272, 689, 734, 769, 1007
SsiI CCGC 3 cut(s) 149, 349, 835
SspMI CTAG 4 cut(s) 546, 786, 858, 873
StyD4I CCNGG 2 cut(s) 574, 1015
StyI CCWWGG 1 cut(s) 520
TaaI ACNGT 5 cut(s) 16, 94, 217, 437, 474
TaqI TCGA 2 cut(s) 590, 759
TasI AATT 6 cut(s) 144, 272, 689, 734, 769, 1007
TatI WGTACW 5 cut(s) 432, 474, 657, 788, 979
TauI GCSGC 3 cut(s) 152, 351, 838
TfiI GAWTC 4 cut(s) 132, 158, 194, 988
Tru1I TTAA 3 cut(s) 359, 773, 1030
Tru9I TTAA 3 cut(s) 359, 773, 1030
TscAI CASTG 1 cut(s) 220
TseI GCWGC 7 cut(s) 126, 265, 283, 345, 490, 893, 910
TspDTI ATGAA 5 cut(s) 45, 714, 747, 817, 881
TspRI CASTG 1 cut(s) 220
XapI RAATTY 2 cut(s) 272, 769
XhoI CTCGAG 1 cut(s) 758
XspI CTAG 4 cut(s) 546, 786, 858, 873
ZrmI AGTACT 2 cut(s) 790, 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.