Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003449

Physical Location & Seq

Genomic Coordinates Reverse (-)

32928480 .. 32931201

Gene Structure 2722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G354700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGTATTCGTTGACGGTGAAGCCCTCTTTCTTTTTACCAAAATTTTCTACTTCTTCTTCGTCGGCTTCTTCTTCTTCTGTACATTTTTGGGCTGGGTCGTGTTCTTCTTCGGTTACCTTCCGAATAAAGACAAAAAACAGAGGAAGCAGGTTGAGAATTCACGCTTACGAGTCTTCAAAGAGCGACAGTCCCAATGCGTCTGGCGATTCCAAGCCTCCCAACGGCACTCTGCCAAAGAGCAGGAGAGAAATTCTTTTGGAGTATGTCAAAAATGTGCAGCCAGAATTCATGGAGCTCTTTGTAAAAAGGGCACCCCAGCAGGTGGTTGATGCAATGCGCCAAACAGTCACAAACATGATTGGAACTCTACCCCCACAATTTTTTGCAGTCACAGTGACCACCGTTGCCGAAAACCTTGCACAACTCATGTACAGTATCATGATGACTGGATATATGTTTCAGAATGCACAGTACAGGTTGGAACTCCAGCAAGGTTTAGAGCCAGTTGCTCTTCCTGATGTGCAAGATAAAAAGGATGCACCAGATTATGCACCTGGGACACAGAAGAATGTGTCAGGTGAAGTTATTAGGTGGAATAATGTTTCTGGCCCCGAGAGAATAGATGCTAAGAAGTACATTGAGTTACTTGAAGCAGAGATTGAGGAACTAAATCATCAAGTTGGGAGGAAATCTGCGAGTGGACAAAATGAACTGTTGGAGTATCTCAAGTCTCTTGAGCCCCAAAATTTAAAGGAGTTGACAAGCAGTGCTGGAGACGATGTTGTGGTTGCAATGAATACATTCATCAAGCGGCTTTTGGCTGTTTCAGATCCTGGCCAAATGAAGACAAGTGTAACAGAGACAAGTGCACCGGAACTTGCCAAACTGCTGTATTGGCTGATGGTTGTGGGATACAGCCTTCGCAATATTGAAGTTCGTTTTGATATGGAAAGAGTACTTGGGACTCCTCCAAAGCTCGCAGAATTGCCTCCAGGAGAAAATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF760

Protein Analysis

336

Amino Acids

37.3

Weight (kDa)

6.87

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63610 AT1G63610 AT1G63610
fragaria_vesca	FvH4_2g37520 FvH4_2g37520 FvH4_2g37520 FvH4_2g37520
malus_domestica	MD08G1002600.v1.1
prunus_persica	Prupe.1G354700_v2.0.a1 Prupe.1G354700_v2.0.a1
pyrus_communis	pycom08g00220
rosa_chinensis	RchiOBHm_Chr5g0060651 RchiOBHm_Chr6g0270451 RchiOBHm_Chr6g0304221
rosa_laevigata	RLG00000011005 RLG00000013791 RLG00000035377
rosa_multiflora	Rmu_sc0009479.1_g000009 Rmu_sc0023816.1_g000001 Rmu_ssc0000218.1_g000014
rosa_roxburghii	Rroxscaffold_1G00020170 Rroxscaffold_7G00163960 Rroxscaffold_7G00197920
rosa_rugosa	Rorug06G0328800 Rorug06G0328900
rosa_samantha	Rh5CG432600 Rh6AG442700 Rh6BG177300 Rh6BG460000 Rh6CG173100 Rh6CG455100 Rh6DG165500 Rh6DG442100
rosa_wichuraiana	Rw5G037250 Rw6G014760 Rw6G038380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	310
Acc36I	ACCTGC	2 cut(s)	138, 310
AccB1I	GGYRCC	1 cut(s)	310
AccB7I	CCANNNNNTGG	1 cut(s)	322
AciI	CCGC	1 cut(s)	811
AclWI	GGATC	1 cut(s)	824
AcoI	YGGCCR	1 cut(s)	835
AcsI	RAATTY	5 cut(s)	41, 156, 249, 284, 745
AfaI	GTAC	5 cut(s)	81, 431, 473, 635, 957
AfiI	CCNNNNNNNGG	2 cut(s)	221, 322
AgsI	TTSAA	3 cut(s)	177, 650, 932
AjnI	CCWGG	3 cut(s)	553, 832, 991
AjuI	GAANNNNNNNTTGG	2 cut(s)	942, 974
AluBI	AGCT	2 cut(s)	295, 976
AluI	AGCT	2 cut(s)	295, 976
Alw21I	GWGCWC	2 cut(s)	297, 871
Alw26I	GTCTC	3 cut(s)	735, 768, 854
Alw44I	GTGCAC	1 cut(s)	867
AlwI	GGATC	1 cut(s)	824
AlwNI	CAGNNNCTG	1 cut(s)	833
Ama87I	CYCGRG	1 cut(s)	611
AoxI	GGCC	2 cut(s)	607, 835
ApaLI	GTGCAC	1 cut(s)	867
ApeKI	GCWGC	1 cut(s)	277
ApoI	RAATTY	5 cut(s)	41, 156, 249, 284, 745
Asp700I	GAANNNNTTC	1 cut(s)	800
AspLEI	GCGC	1 cut(s)	339
AspS9I	GGNCC	1 cut(s)	608
AsuHPI	GGTGA	2 cut(s)	28, 590
AvaI	CYCGRG	1 cut(s)	611
BaeGI	GKGCMC	2 cut(s)	313, 871
BalI	TGGCCA	1 cut(s)	837
BanI	GGYRCC	1 cut(s)	310
BanII	GRGCYC	2 cut(s)	297, 741
BbsI	GAAGAC	2 cut(s)	165, 851
Bbv12I	GWGCWC	2 cut(s)	297, 871
BbvI	GCAGC	1 cut(s)	289
BccI	CCATC	1 cut(s)	895
BceAI	ACGGC	1 cut(s)	238
BcgI	CGANNNNNNTGC	2 cut(s)	398, 432
BciT130I	CCWGG	3 cut(s)	555, 834, 993
BciVI	GTATCC	1 cut(s)	905
BcoDI	GTCTC	3 cut(s)	735, 768, 854
BfuAI	ACCTGC	2 cut(s)	138, 310
BfuI	GTATCC	1 cut(s)	905
BisI	GCNGC	2 cut(s)	278, 812
BlsI	GCNGC	2 cut(s)	279, 813
BmcAI	AGTACT	1 cut(s)	957
Bme1390I	CCNGG	3 cut(s)	555, 834, 993
BmeT110I	CYCGRG	1 cut(s)	611
BmgT120I	GGNCC	1 cut(s)	608
BmiI	GGNNCC	2 cut(s)	312, 610
BmrFI	CCNGG	3 cut(s)	555, 834, 993
BmsI	GCATC	3 cut(s)	319, 526, 613
BpiI	GAAGAC	2 cut(s)	165, 851
BpmI	CTGGAG	3 cut(s)	470, 792, 975
BpuEI	CTTGAG	2 cut(s)	710, 755
BsaJI	CCNNGG	1 cut(s)	554
BsaWI	WCCGGW	1 cut(s)	871
BsaXI	ACNNNNNCTCC	3 cut(s)	765, 795, 987
Bsc4I	CCNNNNNNNGG	2 cut(s)	221, 322
Bse1I	ACTGG	2 cut(s)	451, 503
Bse3DI	GCAATG	2 cut(s)	339, 798
BseBI	CCWGG	3 cut(s)	555, 834, 993
BseDI	CCNNGG	1 cut(s)	554
BseGI	GGATG	1 cut(s)	541
BseLI	CCNNNNNNNGG	2 cut(s)	221, 322
BseMI	GCAATG	2 cut(s)	339, 798
BseNI	ACTGG	2 cut(s)	451, 503
BseRI	GAGGAG	1 cut(s)	957
BseSI	GKGCMC	2 cut(s)	313, 871
BseXI	GCAGC	1 cut(s)	289
BseYI	CCCAGC	2 cut(s)	92, 315
BsgI	GTGCAG	1 cut(s)	296
BshFI	GGCC	2 cut(s)	609, 837
BshNI	GGYRCC	1 cut(s)	310
BsiHKAI	GWGCWC	2 cut(s)	297, 871
BsiHKCI	CYCGRG	1 cut(s)	611
BsiSI	CCGG	1 cut(s)	872
BslFI	GGGAC	3 cut(s)	174, 571, 976
BslI	CCNNNNNNNGG	2 cut(s)	221, 322
BsmAI	GTCTC	3 cut(s)	735, 768, 854
BsmBI	CGTCTC	1 cut(s)	768
BsmFI	GGGAC	3 cut(s)	174, 571, 976
BsmI	GAATGC	1 cut(s)	469
BsnI	GGCC	2 cut(s)	609, 837
BsoBI	CYCGRG	1 cut(s)	611
Bsp1286I	GDGCHC	4 cut(s)	297, 313, 741, 871
Bsp1407I	TGTACA	2 cut(s)	79, 429
Bsp143I	GATC	1 cut(s)	829
BspACI	CCGC	1 cut(s)	811
BspANI	GGCC	2 cut(s)	609, 837
BspHI	TCATGA	1 cut(s)	438
BspLI	GGNNCC	2 cut(s)	312, 610
BspMI	ACCTGC	2 cut(s)	138, 310
BspPI	GGATC	1 cut(s)	824
BspQI	GCTCTTC	1 cut(s)	516
BspT107I	GGYRCC	1 cut(s)	310
BsrDI	GCAATG	2 cut(s)	339, 798
BsrGI	TGTACA	2 cut(s)	79, 429
BsrI	ACTGG	2 cut(s)	451, 503
BssECI	CCNNGG	1 cut(s)	554
BssMI	GATC	1 cut(s)	829
Bst2UI	CCWGG	3 cut(s)	555, 834, 993
Bst4CI	ACNGT	8 cut(s)	16, 188, 346, 394, 403, 434, 471, 714
Bst6I	CTCTTC	1 cut(s)	516
BstAUI	TGTACA	2 cut(s)	79, 429
BstC8I	GCNNGC	1 cut(s)	978
BstDEI	CTNAG	1 cut(s)	627
BstEII	GGTNACC	1 cut(s)	112
BstF5I	GGATG	1 cut(s)	541
BstHHI	GCGC	1 cut(s)	339
BstKTI	GATC	1 cut(s)	832
BstMAI	GTCTC	3 cut(s)	735, 768, 854
BstMBI	GATC	1 cut(s)	829
BstMWI	GCNNNNNNNGC	1 cut(s)	895
BstNI	CCWGG	3 cut(s)	555, 834, 993
BstPI	GGTNACC	1 cut(s)	112
BstSCI	CCNGG	3 cut(s)	553, 832, 991
BstSLI	GKGCMC	2 cut(s)	313, 871
BstV1I	GCAGC	1 cut(s)	289
BstV2I	GAAGAC	2 cut(s)	165, 851
BstX2I	RGATCY	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	829
BsuI	GTATCC	1 cut(s)	905
BsuRI	GGCC	2 cut(s)	609, 837
BtsCI	GGATG	1 cut(s)	541
BtsI	GCAGTG	1 cut(s)	772
BtsIMutI	CAGTG	2 cut(s)	399, 772
BveI	ACCTGC	2 cut(s)	138, 310
Cac8I	GCNNGC	1 cut(s)	978
CaiI	CAGNNNCTG	1 cut(s)	833
CciI	TCATGA	1 cut(s)	438
CfoI	GCGC	1 cut(s)	339
Cfr13I	GGNCC	1 cut(s)	608
CseI	GACGC	1 cut(s)	186
Csp6I	GTAC	5 cut(s)	80, 430, 472, 634, 956
CviAII	CATG	4 cut(s)	289, 355, 427, 439
CviQI	GTAC	5 cut(s)	80, 430, 472, 634, 956
DdeI	CTNAG	1 cut(s)	627
DpnI	GATC	1 cut(s)	831
DpnII	GATC	1 cut(s)	829
DraI	TTTAAA	1 cut(s)	750
EaeI	YGGCCR	1 cut(s)	835
Eam1104I	CTCTTC	1 cut(s)	516
EarI	CTCTTC	1 cut(s)	516
Ecl136II	GAGCTC	1 cut(s)	295
Eco24I	GRGCYC	2 cut(s)	297, 741
Eco53kI	GAGCTC	1 cut(s)	295
Eco88I	CYCGRG	1 cut(s)	611
Eco91I	GGTNACC	1 cut(s)	112
EcoICRI	GAGCTC	1 cut(s)	295
EcoO65I	GGTNACC	1 cut(s)	112
EcoRI	GAATTC	2 cut(s)	156, 284
EcoRII	CCWGG	3 cut(s)	553, 832, 991
EcoT38I	GRGCYC	2 cut(s)	297, 741
Esp3I	CGTCTC	1 cut(s)	768
FaeI	CATG	4 cut(s)	292, 358, 430, 442
FaiI	YATR	9 cut(s)	264, 290, 356, 428, 440, 453, 455, 549, 947
FaqI	GGGAC	3 cut(s)	174, 571, 976
FatI	CATG	4 cut(s)	288, 354, 426, 438
Fnu4HI	GCNGC	2 cut(s)	278, 812
FokI	GGATG	1 cut(s)	548
FriOI	GRGCYC	2 cut(s)	297, 741
Fsp4HI	GCNGC	2 cut(s)	278, 812
GlaI	GCGC	1 cut(s)	338
GluI	GCNGC	2 cut(s)	278, 812
GsaI	CCCAGC	2 cut(s)	96, 319
GsuI	CTGGAG	3 cut(s)	470, 792, 975
HaeIII	GGCC	2 cut(s)	609, 837
HapII	CCGG	1 cut(s)	872
HgaI	GACGC	1 cut(s)	186
HhaI	GCGC	1 cut(s)	339
Hin1II	CATG	4 cut(s)	292, 358, 430, 442
Hin6I	GCGC	1 cut(s)	337
HinP1I	GCGC	1 cut(s)	337
HincII	GTYRAC	2 cut(s)	12, 759
HindII	GTYRAC	2 cut(s)	12, 759
HinfI	GANTC	3 cut(s)	170, 206, 964
HpaII	CCGG	1 cut(s)	872
HphI	GGTGA	2 cut(s)	28, 590
Hpy166II	GTNNAC	4 cut(s)	12, 701, 759, 869
Hpy188I	TCNGA	3 cut(s)	122, 462, 829
Hpy188III	TCNNGA	3 cut(s)	439, 515, 734
Hpy8I	GTNNAC	4 cut(s)	12, 701, 759, 869
Hpy99I	CGWCG	1 cut(s)	64
HpyAV	CCTTC	2 cut(s)	127, 929
HpyCH4III	ACNGT	8 cut(s)	16, 188, 346, 394, 403, 434, 471, 714
HpyF10VI	GCNNNNNNNGC	1 cut(s)	895
HpyF3I	CTNAG	1 cut(s)	627
Hsp92II	CATG	4 cut(s)	292, 358, 430, 442
HspAI	GCGC	1 cut(s)	337
Kzo9I	GATC	1 cut(s)	829
LguI	GCTCTTC	1 cut(s)	516
LmnI	GCTCC	1 cut(s)	292
Lsp1109I	GCAGC	1 cut(s)	289
LweI	GCATC	3 cut(s)	319, 526, 613
MaeIII	GTNAC	6 cut(s)	112, 346, 388, 394, 642, 853
MalI	GATC	1 cut(s)	831
MboI	GATC	1 cut(s)	829
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	4 cut(s)	297, 313, 741, 871
MlsI	TGGCCA	1 cut(s)	837
MluCI	AATT	7 cut(s)	41, 156, 249, 284, 377, 745, 983
MluNI	TGGCCA	1 cut(s)	837
MlyI	GAGTC	2 cut(s)	179, 958
MmeI	TCCRAC	2 cut(s)	459, 696
MnlI	CCTC	7 cut(s)	34, 134, 225, 655, 678, 978, 999
Mox20I	TGGCCA	1 cut(s)	837
MroXI	GAANNNNTTC	1 cut(s)	800
MscI	TGGCCA	1 cut(s)	837
MseI	TTAA	2 cut(s)	749, 1006
MslI	CAYNNNNRTG	1 cut(s)	353
Msp20I	TGGCCA	1 cut(s)	837
MspI	CCGG	1 cut(s)	872
MspR9I	CCNGG	3 cut(s)	555, 834, 993
Mva1269I	GAATGC	1 cut(s)	469
MvaI	CCWGG	3 cut(s)	555, 834, 993
MwoI	GCNNNNNNNGC	1 cut(s)	895
NdeII	GATC	1 cut(s)	829
NlaIII	CATG	4 cut(s)	292, 358, 430, 442
NlaIV	GGNNCC	2 cut(s)	312, 610
NmuCI	GTSAC	3 cut(s)	346, 388, 394
PagI	TCATGA	1 cut(s)	438
PaqCI	CACCTGC	1 cut(s)	310
PciSI	GCTCTTC	1 cut(s)	516
PctI	GAATGC	1 cut(s)	469
PdmI	GAANNNNTTC	1 cut(s)	800
PfeI	GAWTC	1 cut(s)	206
PflMI	CCANNNNNTGG	1 cut(s)	322
PfoI	TCCNGGA	1 cut(s)	991
PkrI	GCNGC	2 cut(s)	279, 813
PleI	GAGTC	2 cut(s)	178, 958
PpsI	GAGTC	2 cut(s)	178, 958
Psp124BI	GAGCTC	1 cut(s)	297
Psp6I	CCWGG	3 cut(s)	553, 832, 991
PspEI	GGTNACC	1 cut(s)	112
PspFI	CCCAGC	2 cut(s)	92, 315
PspGI	CCWGG	3 cut(s)	553, 832, 991
PspN4I	GGNNCC	2 cut(s)	312, 610
PspPI	GGNCC	1 cut(s)	608
PstNI	CAGNNNCTG	1 cut(s)	833
PsuI	RGATCY	1 cut(s)	829
RsaI	GTAC	5 cut(s)	81, 431, 473, 635, 957
RsaNI	GTAC	5 cut(s)	80, 430, 472, 634, 956
RseI	CAYNNNNRTG	1 cut(s)	353
SacI	GAGCTC	1 cut(s)	297
SapI	GCTCTTC	1 cut(s)	516
SaqAI	TTAA	2 cut(s)	749, 1006
SatI	GCNGC	2 cut(s)	278, 812
Sau3AI	GATC	1 cut(s)	829
Sau96I	GGNCC	1 cut(s)	608
ScaI	AGTACT	1 cut(s)	957
SchI	GAGTC	2 cut(s)	179, 958
ScrFI	CCNGG	3 cut(s)	555, 834, 993
SduI	GDGCHC	4 cut(s)	297, 313, 741, 871
SfaNI	GCATC	3 cut(s)	319, 526, 613
SmiMI	CAYNNNNRTG	1 cut(s)	353
SmlI	CTYRAG	2 cut(s)	725, 734
SmoI	CTYRAG	2 cut(s)	725, 734
Sse9I	AATT	7 cut(s)	41, 156, 249, 284, 377, 745, 983
SsiI	CCGC	1 cut(s)	811
SspI	AATATT	1 cut(s)	928
SstI	GAGCTC	1 cut(s)	297
StyD4I	CCNGG	3 cut(s)	553, 832, 991
TaaI	ACNGT	8 cut(s)	16, 188, 346, 394, 403, 434, 471, 714
TasI	AATT	7 cut(s)	41, 156, 249, 284, 377, 745, 983
TatI	WGTACW	5 cut(s)	79, 429, 471, 633, 955
TauI	GCSGC	1 cut(s)	814
TfiI	GAWTC	1 cut(s)	206
Tru1I	TTAA	2 cut(s)	749, 1006
Tru9I	TTAA	2 cut(s)	749, 1006
TscAI	CASTG	2 cut(s)	399, 772
TseFI	GTSAC	3 cut(s)	346, 388, 394
TseI	GCWGC	1 cut(s)	277
Tsp45I	GTSAC	3 cut(s)	346, 388, 394
TspDTI	ATGAA	5 cut(s)	277, 723, 793, 809, 857
TspRI	CASTG	2 cut(s)	399, 772
Van91I	CCANNNNNTGG	1 cut(s)	322
VneI	GTGCAC	1 cut(s)	867
XapI	RAATTY	5 cut(s)	41, 156, 249, 284, 745
XmnI	GAANNNNTTC	1 cut(s)	800
ZrmI	AGTACT	1 cut(s)	957

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.