Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002613

Physical Location & Seq

Genomic Coordinates Forward (+)

16381565 .. 16384730

Gene Structure 3166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G39230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGACTACTTTCATGGTTTCCAAACGATTTCGTCCACCTATTTTTCTCCATCGTTTTATAAATCCAAAACCCATTTCTTCACAGACTCGATTTCTCCATCCACCGGATAATCAAAGTCGAGACATTTCCGATTCCACTACTGAAACCATCTCAACACTAGAATTTCCTCATAAAACCTCTGTACCAAATCATTCACCTTTAACTTCAACCTCTGAGACTGAGAATCATGTGGACGACGCTCGTGTAATCGAAGTGCTTCTAGGTCGTAGAAACGACCCAGTCTCAGCTCTTCAGTACTGCAATTGGGTCAAGCCTTTACATCGTCTCTGTGAAGGTGGAGATGTCTTCTGGGTACTTATTCATATCCTTCTAAGCTCTATTCACACTCACGATCGTGCCAGCAATTTGCTCGTAATGTTCGTTTCGAACAATCCAACGCTAATTCCAAACGTAATGGTTAACAATTTGGTTGATTCGTCTAAACGGTTTGGTTTTGAACTTACCCCACGAGCTTTCAATTACTTGTTGAATGCTTATATTCGAAACAAGCGAATGGATTATGCTGTAGATTGCTTTGGTTTGATGGTGGATCGAAAGGTTGTTCCTTTTGTGCCATATGTGAACAATGTTCTAAGTTCTTTAGTTAGAAGTAATTTGATAGATGAAGCTAAGGAGATTTATAATAAGATGGTTTTAATTGGTGTTGCTGGTGATAATGTAACTACACAGTTGTTGATGCGAGCTAGTTTGAGAGAGAGGAAGCCTGAAGAGGCTGTGAAAATTTTCAGGAGAGTTATGAGTAGAGGAGCAGAACCAGATGGTTTGTTGTTTAGTCTTGCTGTTCAAGCTGCTTGTAAGACGCCAGATTTGGTTATGGCTTTGGATTTGTTGAGGGAAATGAGGGGGAAGTTAGGTGTCCCGGCCTCGCAGGAAACGTATACTAGTGTGATTGTGGCTTTTGTGAAGGAAGGTAATATGGAGGAGGCAGTGAGGGTTATGGATGAGATGGTTGGTTTTGGGATACCGATGAGTGTAATTGCTGCAACGAGTTTGGTTAATGGATATTGCAAGGGGAATGAGTTAGGTAAGGCTTTGGATTTGTTTAATAGAATGGAGGAGGAAGGGCTGGCTCCGGACAAAGTTATGTTTTCGGTTATGGTCGAATGGTTTTGTAAGAATATGGAGATGGAGAAAGCTATTGAGTTTTATATGAGGATGAAATCTGTAAGGATTGCTCCTTCATCTGTTCTTGTCCATACAATGATCCAAGGGTGTTTGAAAGCTGAGTCACCAGAAGCGGCGCTAGAAATCTTTAACGACAGTTTTGAAAGCTGGATTGCGCATGGTTTTATGTGTAACAAGATTTTTTTATTGTTTTGCAAGCAAGGTAAAGTCGATGCTGCAACAAGCTTTTTGAAGATGATGGAGCAAAAAGGGATTGAGCCGAATGTAGTTTTTTACAATAACATGATGCTTGCTCATTGCAGAATGAAAAACATGGACTTGGCTCGTTCAATATTTTCTGAAATGCTGGAAAAGGGTCTAGAGCCGAATAACTTCACTTATTCCATCTTGATCGATGGATTTTTCAAGAATAAGGATGAACAGAATGCTTGGGATGTCATCAATCAGATGAATGCTTCCAATTTCGAAGCTAATGAAGTCATATATAATACGATCATCAATGGTTTGTGTAAAGTTGGTCAGACGTCTAAAGCCAAAGAGATGTTGCAAAATTTGATCAAAGAAAAGCGCTATTCCATGAGTTGCACGAGTTACAATAGCATCATAGATGGATTCGTCAAAGTAGGTGATACTGATTCCGCTGTCGAAACTTACAGAGAGATGAGTGAAAACGGTAAATCTCCAAATGTTGTAACCTTCACCAGCTTGATCAATGGATTCTGCAAAAGTAACCGAATGGATCTAGCTCTTGAAATGACACACGAAATGAAAAGCATGGAGTTGAAACTTGATCTTCCAGCCTACGGTGCACTAATAGACGGGTTCTGTAAAAAGAATGACATGAAAACCGCATATACTTTGTTCTCTGAACTGCCGGAACTAGGATTGATGCCAAATGTGTCTGTCTACAATAGTTTGATTTCAGGATTCCGTAATCTGGGAAAGATGGATGCAGCGATTGACTTGTACAAGAAAATGGTGAATGATGGAATAAGTTGTGATCTGTTTACATATACAACGATGATCGACGGGTTGTTAAAAGATGGAAATATAAATCTTGCCTCTGATTTGTACTCGGAGTTGCTTGATTTAGGTATTGTCCCTGATGAAATCTTGCACATGGTACTTGTCAACGGTCTTAGTAAGAAGGGACAGTTTTTGAAAGCTAGCAAGATGTTAGAGGAGATGAAGAAGAAAGATGTGACTCCAAATGTGCTTCTATACAGTACTGTTATTGCAGGACATCATAGAGAAGGAAATCTCAATGAGGCTTTTAGACTTCATGATGAGATGCTTGAGAAAGGTATTGTACATGATGATACTGTATTCAATTTACTCGTGAGTGGAAGAGTTGAGAAACCTCCTGCTGCATCCAAGATTAGTAGCTTGGCTTCTCCTGAGATGAGATCGAGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

867

Amino Acids

97.67

Weight (kDa)

6.05

Isoelectric Point (pI)

34.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	256 - 343	1e-05	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	311 - 357	4.3e-09	PPR repeat family
PPR	PF01535	312 - 341	6.9e-07	PPR repeat
PPR_2	PF13041	344 - 392	5.6e-10	PPR repeat family
PPR	PF01535	349 - 376	5.1e-06	PPR repeat
PPR_2	PF13041	378 - 427	5.3e-06	PPR repeat family
PPR_long	PF17177	420 - 583	5.9e-10	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	482 - 531	1.6e-17	PPR repeat family
TPR_24	PF23276	496 - 616	1.6e-10	Fungal tetratrico peptide repeats
PPR_1	PF12854	513 - 545	2.5e-06	PPR repeat
PPR_2	PF13041	525 - 566	1.3e-07	PPR repeat family
PPR_1	PF12854	550 - 577	3.2e-07	PPR repeat
TPR_24	PF23276	573 - 684	5.3e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	589 - 635	2.7e-07	Pentatricopeptide repeat domain
PPR	PF01535	592 - 620	4.9e-06	PPR repeat
PPR_2	PF13041	592 - 637	2.7e-15	PPR repeat family
PPR_1	PF12854	620 - 652	2e-11	PPR repeat
PPR_2	PF13041	623 - 672	2.5e-13	PPR repeat family
PPR	PF01535	626 - 654	9.9e-07	PPR repeat
TPR_24	PF23276	638 - 755	5.3e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	648 - 704	5.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	662 - 705	8.8e-10	PPR repeat family
PPR_1	PF12854	690 - 722	4.8e-06	PPR repeat
PPR_2	PF13041	693 - 742	2.6e-15	PPR repeat family
PPR	PF01535	697 - 726	1.8e-06	PPR repeat
PPR_long	PF17177	712 - 836	3.9e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	731 - 765	1.9e-06	PPR repeat family
PPR_2	PF13041	770 - 804	9.8e-06	PPR repeat family
PPR_1	PF12854	795 - 826	1.9e-06	PPR repeat
PPR_2	PF13041	798 - 844	5.8e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002613)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39230 AT3G54980 AT3G54980
fragaria_vesca	FvH4_5g25890 FvH4_5g25890 FvH4_5g25890
malus_domestica	MD04G1151000.v1.1 MD12G1164900.v1.1
prunus_persica	Prupe.6G275900_v2.0.a1 Prupe.6G275900_v2.0.a1
pyrus_communis	pycom04g13670 pycom12g15770
rosa_chinensis	RchiOBHm_Chr4g0410561 RchiOBHm_Chr4g0410571 RchiOBHm_Chr5g0071501 RchiOBHm_Chr6g0264781 RchiOBHm_Chr7g0216391 RchiOBHm_Chr7g0216401
rosa_laevigata	RLG00000002575 RLG00000002576 RLG00000002577 RLG00000031675
rosa_multiflora	Rmu_sc0000692.1_g000003 Rmu_sc0000692.1_g000005 Rmu_sc0006325.1_g000046
rosa_roxburghii	Rroxscaffold_159G00432870 Rroxscaffold_3G00243290 Rroxscaffold_4G00298080
rosa_rugosa	Rorug01G0081600 Rorug07G0160300
rosa_samantha	Rh2DG118300 Rh4CG174000 Rh4CG174100 Rh4CG174200 Rh7AG298700 Rh7AG298800 Rh7BG290300 Rh7BG290400
rosa_wichuraiana	Rw7G025370 Rw7G025380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	59, 681
AatII	GACGTC	1 cut(s)	1712
Acc16I	TGCGCA	1 cut(s)	1341
AccI	GTMKAC	2 cut(s)	938, 2091
AccIII	TCCGGA	1 cut(s)	1132
AciI	CCGC	3 cut(s)	1298, 1824, 2034
AclWI	GGATC	3 cut(s)	597, 1258, 1932
AcsI	RAATTY	3 cut(s)	161, 780, 1735
AcuI	CTGAAG	2 cut(s)	275, 786
AcyI	GRCGYC	2 cut(s)	860, 1709
AfaI	GTAC	8 cut(s)	183, 296, 354, 2153, 2258, 2310, 2413, 2496
AfeI	AGCGCT	1 cut(s)	1754
AfiI	CCNNNNNNNGG	4 cut(s)	103, 1988, 2066, 2122
AhlI	ACTAGT	1 cut(s)	941
AjuI	GAANNNNNNNTTGG	2 cut(s)	58, 90
AleI	CACNNNNGTG	1 cut(s)	393
Alw21I	GWGCWC	1 cut(s)	1996
Alw26I	GTCTC	4 cut(s)	114, 209, 286, 329
Alw44I	GTGCAC	1 cut(s)	1992
AlwI	GGATC	3 cut(s)	597, 1258, 1932
Aor13HI	TCCGGA	1 cut(s)	1132
Aor51HI	AGCGCT	1 cut(s)	1754
AoxI	GGCC	1 cut(s)	921
ApaLI	GTGCAC	1 cut(s)	1992
ApeKI	GCWGC	5 cut(s)	848, 1040, 1400, 2138, 2552
ApoI	RAATTY	3 cut(s)	161, 780, 1735
ArsI	GACNNNNNNTTYG	2 cut(s)	850, 882
Asp700I	GAANNNNTTC	3 cut(s)	255, 782, 1556
AspLEI	GCGC	3 cut(s)	1303, 1342, 1755
AsuC2I	CCSGG	1 cut(s)	920
AsuHPI	GGTGA	6 cut(s)	186, 722, 1281, 1823, 1876, 2176
AsuII	TTCGAA	3 cut(s)	425, 541, 1650
AsuNHI	GCTAGC	1 cut(s)	2351
BaeGI	GKGCMC	1 cut(s)	1996
BaeI	ACNNNNGTAYC	2 cut(s)	165, 198
BarI	GAAGNNNNNNTAC	2 cut(s)	2560, 2592
BauI	CACGAG	4 cut(s)	240, 507, 1771, 2522
BbsI	GAAGAC	1 cut(s)	337
Bbv12I	GWGCWC	1 cut(s)	1996
BbvI	GCAGC	5 cut(s)	835, 1027, 1387, 2150, 2539
BcgI	CGANNNNNNTGC	2 cut(s)	391, 425
BciVI	GTATCC	1 cut(s)	1014
BclI	TGATCA	2 cut(s)	1740, 1893
BcnI	CCSGG	1 cut(s)	920
BcoDI	GTCTC	4 cut(s)	114, 209, 286, 329
BcuI	ACTAGT	1 cut(s)	941
BfaI	CTAG	9 cut(s)	158, 260, 744, 942, 1304, 1544, 1928, 2066, 2352
BfmI	CTRYAG	1 cut(s)	564
BfoI	RGCGCY	2 cut(s)	1304, 1756
BfuI	GTATCC	1 cut(s)	1014
BisI	GCNGC	6 cut(s)	849, 1041, 1299, 1401, 2139, 2553
BlsI	GCNGC	6 cut(s)	850, 1042, 1300, 1402, 2140, 2554
BmcAI	AGTACT	2 cut(s)	296, 2413
Bme1390I	CCNGG	1 cut(s)	920
BmiI	GGNNCC	1 cut(s)	1131
BmrFI	CCNGG	1 cut(s)	920
BmrI	ACTGGG	1 cut(s)	272
BmsI	GCATC	8 cut(s)	726, 1387, 1461, 1794, 2064, 2125, 2466, 2564
BmtI	GCTAGC	1 cut(s)	2355
BmuI	ACTGGG	1 cut(s)	272
BpiI	GAAGAC	1 cut(s)	337
Bpu10I	CCTNAGC	1 cut(s)	669
Bpu14I	TTCGAA	3 cut(s)	425, 541, 1650
BpuEI	CTTGAG	1 cut(s)	2501
BpuMI	CCSGG	1 cut(s)	920
Bsa29I	ATCGAT	1 cut(s)	1578
BsaHI	GRCGYC	2 cut(s)	860, 1709
BsaJI	CCNNGG	1 cut(s)	1267
BsaWI	WCCGGW	2 cut(s)	103, 1132
Bsc4I	CCNNNNNNNGG	4 cut(s)	103, 1988, 2066, 2122
Bse1I	ACTGG	1 cut(s)	278
Bse3DI	GCAATG	1 cut(s)	1480
BseAI	TCCGGA	1 cut(s)	1132
BseCI	ATCGAT	1 cut(s)	1578
BseDI	CCNNGG	1 cut(s)	1267
BseGI	GGATG	7 cut(s)	97, 1006, 1221, 1606, 1624, 2140, 2555
BseLI	CCNNNNNNNGG	4 cut(s)	103, 1988, 2066, 2122
BseMI	GCAATG	1 cut(s)	1480
BseMII	CTCAG	5 cut(s)	204, 210, 297, 1275, 2574
BseNI	ACTGG	1 cut(s)	278
BseRI	GAGGAG	4 cut(s)	819, 995, 1130, 2381
BseSI	GKGCMC	1 cut(s)	1996
BseXI	GCAGC	5 cut(s)	835, 1027, 1387, 2150, 2539
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	1 cut(s)	923
BshVI	ATCGAT	1 cut(s)	1578
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	1996
BsiSI	CCGG	4 cut(s)	104, 920, 1133, 2060
BslFI	GGGAC	3 cut(s)	902, 2270, 2349
BslI	CCNNNNNNNGG	4 cut(s)	103, 1988, 2066, 2122
BsmAI	GTCTC	4 cut(s)	114, 209, 286, 329
BsmBI	CGTCTC	1 cut(s)	329
BsmFI	GGGAC	3 cut(s)	902, 2270, 2349
BsmI	GAATGC	3 cut(s)	535, 1615, 1642
BsnI	GGCC	1 cut(s)	923
Bsp119I	TTCGAA	3 cut(s)	425, 541, 1650
Bsp1286I	GDGCHC	1 cut(s)	1996
Bsp13I	TCCGGA	1 cut(s)	1132
Bsp1407I	TGTACA	2 cut(s)	2151, 2494
BspACI	CCGC	3 cut(s)	1298, 1824, 2034
BspANI	GGCC	1 cut(s)	923
BspCNI	CTCAG	5 cut(s)	205, 211, 296, 1276, 2575
BspDI	ATCGAT	1 cut(s)	1578
BspEI	TCCGGA	1 cut(s)	1132
BspHI	TCATGA	1 cut(s)	2467
BspLI	GGNNCC	1 cut(s)	1131
BspOI	GCTAGC	1 cut(s)	2355
BspPI	GGATC	3 cut(s)	597, 1258, 1932
BspQI	GCTCTTC	1 cut(s)	294
BspT104I	TTCGAA	3 cut(s)	425, 541, 1650
BsrDI	GCAATG	1 cut(s)	1480
BsrGI	TGTACA	2 cut(s)	2151, 2494
BsrI	ACTGG	1 cut(s)	278
BssECI	CCNNGG	1 cut(s)	1267
BssNAI	GTATAC	1 cut(s)	939
BssNI	GRCGYC	2 cut(s)	860, 1709
BssSI	CACGAG	4 cut(s)	240, 507, 1771, 2522
BssT1I	CCWWGG	1 cut(s)	1267
Bst1107I	GTATAC	1 cut(s)	939
Bst2BI	CACGAG	4 cut(s)	240, 507, 1771, 2522
Bst6I	CTCTTC	3 cut(s)	294, 762, 2527
BstACI	GRCGYC	2 cut(s)	860, 1709
BstAUI	TGTACA	2 cut(s)	2151, 2494
BstBI	TTCGAA	3 cut(s)	425, 541, 1650
BstC8I	GCNNGC	6 cut(s)	400, 741, 1128, 1382, 1476, 2353
BstDEI	CTNAG	9 cut(s)	213, 219, 283, 371, 632, 669, 1284, 2324, 2583
BstF5I	GGATG	7 cut(s)	97, 1006, 1221, 1606, 1624, 2140, 2555
BstH2I	RGCGCY	2 cut(s)	1304, 1756
BstHHI	GCGC	3 cut(s)	1303, 1342, 1755
BstMAI	GTCTC	4 cut(s)	114, 209, 286, 329
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	2 cut(s)	845, 1991
BstSCI	CCNGG	1 cut(s)	918
BstSFI	CTRYAG	1 cut(s)	564
BstSLI	GKGCMC	1 cut(s)	1996
BstV1I	GCAGC	5 cut(s)	835, 1027, 1387, 2150, 2539
BstV2I	GAAGAC	1 cut(s)	337
BstX2I	RGATCY	1 cut(s)	1924
BstYI	RGATCY	1 cut(s)	1924
BstZ17I	GTATAC	1 cut(s)	939
Bsu15I	ATCGAT	1 cut(s)	1578
BsuI	GTATCC	1 cut(s)	1014
BsuRI	GGCC	1 cut(s)	923
BsuTUI	ATCGAT	1 cut(s)	1578
BtsCI	GGATG	7 cut(s)	97, 1006, 1221, 1606, 1624, 2140, 2555
BtsI	GCAGTG	1 cut(s)	993
BtsIMutI	CAGTG	1 cut(s)	993
Cac8I	GCNNGC	6 cut(s)	400, 741, 1128, 1382, 1476, 2353
CciI	TCATGA	1 cut(s)	2467
CfoI	GCGC	3 cut(s)	1303, 1342, 1755
ClaI	ATCGAT	1 cut(s)	1578
CseI	GACGC	2 cut(s)	245, 868
Csp6I	GTAC	8 cut(s)	182, 295, 353, 2152, 2257, 2309, 2412, 2495
CviQI	GTAC	8 cut(s)	182, 295, 353, 2152, 2257, 2309, 2412, 2495
DdeI	CTNAG	9 cut(s)	213, 219, 283, 371, 632, 669, 1284, 2324, 2583
Eam1104I	CTCTTC	3 cut(s)	294, 762, 2527
EarI	CTCTTC	3 cut(s)	294, 762, 2527
Eco130I	CCWWGG	1 cut(s)	1267
Eco47III	AGCGCT	1 cut(s)	1754
Eco57I	CTGAAG	2 cut(s)	275, 786
EcoT14I	CCWWGG	1 cut(s)	1267
ErhI	CCWWGG	1 cut(s)	1267
Esp3I	CGTCTC	1 cut(s)	329
FaqI	GGGAC	3 cut(s)	902, 2270, 2349
FauNDI	CATATG	1 cut(s)	616
FbaI	TGATCA	2 cut(s)	1740, 1893
FblI	GTMKAC	2 cut(s)	938, 2091
Fnu4HI	GCNGC	6 cut(s)	849, 1041, 1299, 1401, 2139, 2553
FokI	GGATG	7 cut(s)	84, 1013, 1228, 1613, 1631, 2147, 2542
Fsp4HI	GCNGC	6 cut(s)	849, 1041, 1299, 1401, 2139, 2553
FspBI	CTAG	9 cut(s)	158, 260, 744, 942, 1304, 1544, 1928, 2066, 2352
FspI	TGCGCA	1 cut(s)	1341
GlaI	GCGC	3 cut(s)	1302, 1341, 1754
GluI	GCNGC	6 cut(s)	849, 1041, 1299, 1401, 2139, 2553
HaeII	RGCGCY	2 cut(s)	1304, 1756
HaeIII	GGCC	1 cut(s)	923
HapII	CCGG	4 cut(s)	104, 920, 1133, 2060
HgaI	GACGC	2 cut(s)	245, 868
HhaI	GCGC	3 cut(s)	1303, 1342, 1755
Hin1I	GRCGYC	2 cut(s)	860, 1709
Hin6I	GCGC	3 cut(s)	1301, 1340, 1753
HinP1I	GCGC	3 cut(s)	1301, 1340, 1753
HincII	GTYRAC	2 cut(s)	460, 2317
HindII	GTYRAC	2 cut(s)	460, 2317
HindIII	AAGCTT	1 cut(s)	1408
HpaI	GTTAAC	1 cut(s)	460
HpaII	CCGG	4 cut(s)	104, 920, 1133, 2060
HphI	GGTGA	6 cut(s)	186, 722, 1281, 1823, 1876, 2176
Hpy166II	GTNNAC	9 cut(s)	35, 232, 460, 622, 939, 1994, 2092, 2193, 2317
Hpy188I	TCNGA	8 cut(s)	130, 214, 1525, 1632, 1707, 2053, 2251, 2263
Hpy8I	GTNNAC	9 cut(s)	35, 232, 460, 622, 939, 1994, 2092, 2193, 2317
Hpy99I	CGWCG	2 cut(s)	239, 2216
HpyAV	CCTTC	9 cut(s)	326, 377, 958, 962, 1115, 1248, 1891, 2326, 2432
HpyCH4IV	ACGT	3 cut(s)	450, 935, 1709
HpyF10VI	GCNNNNNNNGC	2 cut(s)	845, 1991
HpyF3I	CTNAG	9 cut(s)	213, 219, 283, 371, 632, 669, 1284, 2324, 2583
HpySE526I	ACGT	3 cut(s)	450, 935, 1709
Hsp92I	GRCGYC	2 cut(s)	860, 1709
HspAI	GCGC	3 cut(s)	1301, 1340, 1753
Kpn2I	TCCGGA	1 cut(s)	1132
Ksp22I	TGATCA	2 cut(s)	1740, 1893
KspAI	GTTAAC	1 cut(s)	460
LguI	GCTCTTC	1 cut(s)	294
LmnI	GCTCC	4 cut(s)	806, 1135, 1240, 1426
Lsp1109I	GCAGC	5 cut(s)	835, 1027, 1387, 2150, 2539
LweI	GCATC	8 cut(s)	726, 1387, 1461, 1794, 2064, 2125, 2466, 2564
MaeI	CTAG	9 cut(s)	158, 260, 744, 942, 1304, 1544, 1928, 2066, 2352
MaeII	ACGT	3 cut(s)	450, 935, 1709
MaeIII	GTNAC	7 cut(s)	718, 1287, 1355, 1775, 1876, 1913, 2386
MboII	GAAGA	9 cut(s)	69, 281, 337, 779, 1429, 1970, 2386, 2389, 2544
MfeI	CAATTG	1 cut(s)	301
MflI	RGATCY	1 cut(s)	1924
MhlI	GDGCHC	1 cut(s)	1996
MlyI	GAGTC	3 cut(s)	79, 1295, 2383
MmeI	TCCRAC	1 cut(s)	458
MroI	TCCGGA	1 cut(s)	1132
MroXI	GAANNNNTTC	3 cut(s)	255, 782, 1556
MseI	TTAA	7 cut(s)	200, 459, 695, 1056, 1104, 1314, 2222
MslI	CAYNNNNRTG	1 cut(s)	393
MspA1I	CMGCKG	1 cut(s)	1826
MspI	CCGG	4 cut(s)	104, 920, 1133, 2060
MspR9I	CCNGG	1 cut(s)	920
MunI	CAATTG	1 cut(s)	301
Mva1269I	GAATGC	3 cut(s)	535, 1615, 1642
MwoI	GCNNNNNNNGC	2 cut(s)	845, 1991
NciI	CCSGG	1 cut(s)	920
NdeI	CATATG	1 cut(s)	616
NheI	GCTAGC	1 cut(s)	2351
NlaIV	GGNNCC	1 cut(s)	1131
NmuCI	GTSAC	2 cut(s)	1287, 2386
NsbI	TGCGCA	1 cut(s)	1341
NspV	TTCGAA	3 cut(s)	425, 541, 1650
OliI	CACNNNNGTG	1 cut(s)	393
PagI	TCATGA	1 cut(s)	2467
PciSI	GCTCTTC	1 cut(s)	294
PcsI	WCGNNNNNNNCGW	3 cut(s)	417, 547, 932
PctI	GAATGC	3 cut(s)	535, 1615, 1642
PdmI	GAANNNNTTC	3 cut(s)	255, 782, 1556
PfeI	GAWTC	7 cut(s)	131, 223, 473, 1797, 1820, 1902, 2112
PflFI	GACNNNGTC	1 cut(s)	278
PkrI	GCNGC	6 cut(s)	850, 1042, 1300, 1402, 2140, 2554
Ple19I	CGATCG	1 cut(s)	394
PleI	GAGTC	3 cut(s)	79, 1294, 2383
PpsI	GAGTC	3 cut(s)	79, 1294, 2383
PsiI	TTATAA	2 cut(s)	59, 681
PspN4I	GGNNCC	1 cut(s)	1131
PsuI	RGATCY	1 cut(s)	1924
PsyI	GACNNNGTC	1 cut(s)	278
PvuI	CGATCG	1 cut(s)	394
RsaI	GTAC	8 cut(s)	183, 296, 354, 2153, 2258, 2310, 2413, 2496
RsaNI	GTAC	8 cut(s)	182, 295, 353, 2152, 2257, 2309, 2412, 2495
RseI	CAYNNNNRTG	1 cut(s)	393
SapI	GCTCTTC	1 cut(s)	294
SaqAI	TTAA	7 cut(s)	200, 459, 695, 1056, 1104, 1314, 2222
SatI	GCNGC	6 cut(s)	849, 1041, 1299, 1401, 2139, 2553
ScaI	AGTACT	2 cut(s)	296, 2413
SchI	GAGTC	3 cut(s)	79, 1295, 2383
ScrFI	CCNGG	1 cut(s)	920
SduI	GDGCHC	1 cut(s)	1996
SfaNI	GCATC	8 cut(s)	726, 1387, 1461, 1794, 2064, 2125, 2466, 2564
SfcI	CTRYAG	1 cut(s)	564
SfuI	TTCGAA	3 cut(s)	425, 541, 1650
SmiMI	CAYNNNNRTG	1 cut(s)	393
SmlI	CTYRAG	1 cut(s)	2480
SmoI	CTYRAG	1 cut(s)	2480
SpeI	ACTAGT	1 cut(s)	941
SsiI	CCGC	3 cut(s)	1298, 1824, 2034
SspI	AATATT	1 cut(s)	1518
SspMI	CTAG	9 cut(s)	158, 260, 744, 942, 1304, 1544, 1928, 2066, 2352
StyD4I	CCNGG	1 cut(s)	918
StyI	CCWWGG	1 cut(s)	1267
TaiI	ACGT	3 cut(s)	453, 938, 1712
TatI	WGTACW	5 cut(s)	294, 2151, 2256, 2411, 2494
TauI	GCSGC	1 cut(s)	1301
TfiI	GAWTC	7 cut(s)	131, 223, 473, 1797, 1820, 1902, 2112
Tru1I	TTAA	7 cut(s)	200, 459, 695, 1056, 1104, 1314, 2222
Tru9I	TTAA	7 cut(s)	200, 459, 695, 1056, 1104, 1314, 2222
TscAI	CASTG	1 cut(s)	993
TseFI	GTSAC	2 cut(s)	1287, 2386
TseI	GCWGC	5 cut(s)	848, 1040, 1400, 2138, 2552
Tsp45I	GTSAC	2 cut(s)	1287, 2386
TspGWI	ACGGA	1 cut(s)	2105
TspRI	CASTG	1 cut(s)	993
Tth111I	GACNNNGTC	1 cut(s)	278
VneI	GTGCAC	1 cut(s)	1992
XapI	RAATTY	3 cut(s)	161, 780, 1735
XbaI	TCTAGA	1 cut(s)	1543
XmiI	GTMKAC	2 cut(s)	938, 2091
XmnI	GAANNNNTTC	3 cut(s)	255, 782, 1556
XspI	CTAG	9 cut(s)	158, 260, 744, 942, 1304, 1544, 1928, 2066, 2352
ZraI	GACGTC	1 cut(s)	1710
ZrmI	AGTACT	2 cut(s)	296, 2413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.