Rmu_sc0006325.1_g000046

Belongs to the glutathione peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006325.1
Physical Location & Seq
Reverse (-)
187591 .. 190265
2675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006325.1_g000046.1.cds

Sequence Viewer

Length: 342 bp
ctgcgttccatctatctagggacagagagagagtttgaggctgaaagagggagacgggaagaagttgatggtcgattcgaacagaaattgagtgaactgatcatcccagaaaggcagaagagctgctgtttctggtgtttgaggtgtggcttcaaacatccaattccagagttattcttcatgcttggagacatagattgcttctacgttcaaggtttcacatgctactgttgtaagaaattggtctgcaaggatattcatggaaatgatgtaaacctaagtgagcacagtggcaaggttcttctgattgtgaatgttgcttcaaaatggtttttggcctga

Protein Analysis

113

Amino Acids

13.2

Weight (kDa)

6.97

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 154, 212, 324
AloI GAACNNNNNNTCC 2 cut(s) 87, 119
AluBI AGCT 1 cut(s) 123
AluI AGCT 1 cut(s) 123
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 2 cut(s) 46, 183
AoxI GGCC 1 cut(s) 336
ApeKI GCWGC 1 cut(s) 123
AsuII TTCGAA 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 1 cut(s) 110
BccI CCATC 2 cut(s) 17, 62
BclI TGATCA 1 cut(s) 99
BcoDI GTCTC 2 cut(s) 46, 183
BfaI CTAG 1 cut(s) 17
BisI GCNGC 1 cut(s) 124
BlsI GCNGC 1 cut(s) 125
Bpu14I TTCGAA 1 cut(s) 78
BseGI GGATG 2 cut(s) 102, 157
BseXI GCAGC 1 cut(s) 110
BshFI GGCC 1 cut(s) 338
BsiHKAI GWGCWC 1 cut(s) 288
BslFI GGGAC 1 cut(s) 34
BsmAI GTCTC 2 cut(s) 46, 183
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 1 cut(s) 34
BsnI GGCC 1 cut(s) 338
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 1 cut(s) 99
BspANI GGCC 1 cut(s) 338
BspQI GCTCTTC 1 cut(s) 113
BspT104I TTCGAA 1 cut(s) 78
BssMI GATC 1 cut(s) 99
Bst4CI ACNGT 2 cut(s) 230, 290
Bst6I CTCTTC 1 cut(s) 113
BstBI TTCGAA 1 cut(s) 78
BstDEI CTNAG 1 cut(s) 278
BstF5I GGATG 2 cut(s) 102, 157
BstKTI GATC 1 cut(s) 102
BstMAI GTCTC 2 cut(s) 46, 183
BstMBI GATC 1 cut(s) 99
BstNSI RCATGY 1 cut(s) 225
BstV1I GCAGC 1 cut(s) 110
BsuRI GGCC 1 cut(s) 338
BtsCI GGATG 2 cut(s) 102, 157
BtsIMutI CAGTG 1 cut(s) 295
CviAII CATG 3 cut(s) 181, 222, 260
CviJI RGCY 4 cut(s) 41, 123, 150, 338
CviKI_1 RGCY 4 cut(s) 41, 123, 150, 338
DdeI CTNAG 1 cut(s) 278
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 3 cut(s) 184, 225, 263
FaiI YATR 4 cut(s) 182, 194, 223, 261
FaqI GGGAC 1 cut(s) 34
FatI CATG 3 cut(s) 180, 221, 259
FbaI TGATCA 1 cut(s) 99
Fnu4HI GCNGC 1 cut(s) 124
FokI GGATG 2 cut(s) 89, 144
Fsp4HI GCNGC 1 cut(s) 124
FspBI CTAG 1 cut(s) 17
GluI GCNGC 1 cut(s) 124
HaeIII GGCC 1 cut(s) 338
Hin1II CATG 3 cut(s) 184, 225, 263
HinfI GANTC 1 cut(s) 75
Hpy166II GTNNAC 2 cut(s) 95, 274
Hpy188I TCNGA 1 cut(s) 306
Hpy188III TCNNGA 1 cut(s) 167
Hpy8I GTNNAC 2 cut(s) 95, 274
HpyCH4III ACNGT 2 cut(s) 230, 290
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 1 cut(s) 249
HpyF3I CTNAG 1 cut(s) 278
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 3 cut(s) 184, 225, 263
Ksp22I TGATCA 1 cut(s) 99
Kzo9I GATC 1 cut(s) 99
LguI GCTCTTC 1 cut(s) 113
LpnPI CCDG 3 cut(s) 118, 120, 180
Lsp1109I GCAGC 1 cut(s) 110
MaeI CTAG 1 cut(s) 17
MaeII ACGT 1 cut(s) 207
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MboII GAAGA 4 cut(s) 71, 130, 169, 293
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 3 cut(s) 86, 162, 239
MnlI CCTC 3 cut(s) 31, 41, 135
MslI CAYNNNNRTG 1 cut(s) 264
NdeII GATC 1 cut(s) 99
NlaIII CATG 3 cut(s) 184, 225, 263
NspI RCATGY 1 cut(s) 225
NspV TTCGAA 1 cut(s) 78
PciSI GCTCTTC 1 cut(s) 113
PfeI GAWTC 1 cut(s) 75
PkrI GCNGC 1 cut(s) 125
RseI CAYNNNNRTG 1 cut(s) 264
SapI GCTCTTC 1 cut(s) 113
SatI GCNGC 1 cut(s) 124
Sau3AI GATC 1 cut(s) 99
SduI GDGCHC 1 cut(s) 288
SetI ASST 6 cut(s) 125, 146, 210, 217, 279, 300
SfuI TTCGAA 1 cut(s) 78
SmiMI CAYNNNNRTG 1 cut(s) 264
Sse9I AATT 3 cut(s) 86, 162, 239
SspMI CTAG 1 cut(s) 17
TaaI ACNGT 2 cut(s) 230, 290
TaiI ACGT 1 cut(s) 210
TaqI TCGA 2 cut(s) 73, 78
TasI AATT 3 cut(s) 86, 162, 239
TfiI GAWTC 1 cut(s) 75
TscAI CASTG 1 cut(s) 295
TseI GCWGC 1 cut(s) 123
TspDTI ATGAA 2 cut(s) 169, 248
TspRI CASTG 1 cut(s) 295
XceI RCATGY 1 cut(s) 225
XspI CTAG 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.