AT2G40370

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001265
Physical Location & Seq
Reverse (-)
16857959 .. 16860779
2821 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G40370.1

Sequence Viewer

Length: 1743 bp
ATGGATGTCACCAAGAGCCTCCTCTGCTTCATCTCTTTCGTCGCCTTTCTTCTCTTCTCCTCCGTGGCAGAAGCCAACAAAGCACACCACCACGAGTTCATAATACAAGCGACAAAGGTGAAGAGACTATGTGAAACACACAACAGTATTACAGTCAATGGAATGTTTCCCGGTCCAATGCTTGTAGTCAACAACGGTGACACTCTCGTCGTCAAAGTTATCAACCGGGCCCGGTACAACATCACAATCCACTGGCACGGTGTGAGGCAGATGCGAACCGGTTGGGCTGACGGACCGGAATTTGTGACCCAATGCCCAATCAGACCGGGATCAAGTTACACGTACCGGTTTACAATTCAAGGACAGGAAGGTACACTTTGGTGGCATGCTCATAGTTCGTGGCTTAGAGCAACTGTCTACGGTTCACTTCTCGTCTTTCCTCCTGCTGGTTCGTCTTACCCATTCACAAAACCCCACCGCAACGTCCCTCTCCTTCTTGGTGAATGGTGGGACGCAAATCCGGTTGATGTGTTGAGAGAATCTATACGAACCGGAGGAGCTCCGAATAACTCAGACGCTTACACCATCAATGGTCAACCTGGCGATCTCTATAAATGCTCTTCTCAAGATACGACAGTAGTACCAATAAATGTTGGTGAGACTATACTACTACGAGTAATAAACTCAGCATTAAACCAACCGTTATTCTTCACGGTGGCTAATCACAAACTCACGGTGGTCGGAGCTGACGCGTCATACCTAAAACCCTTCACCACTAACGTGATAGTTCTTGGCCCGGGACAAACCACAGATGTCCTCATAACCGGTGACCAACCACCAAATCGCTACTACATGGCCGCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGGAAACACAACCACAACAGCAATCCTTCAATACAAATCCGCCCCTTGTTGCGGTGTAGGCGGCGGAAGTGGAACCAAGAAGGGTAATTCCTTCAAACCGATCATGCCTATCCTCCCTGCCTACAACGACACAAACACCGTCACACGTTTCAGCCAAAGCTTCCGGTCACTTAGACGAGCTGAGGTTCCGACAGAAATCGACGAGAATCTCTTCGTAACCATCGGACTCGGTCTCAACAACTGTCCTAAGAACTTCAGATCAAGAAGATGTCAAGGTCCTAACGGCACACGTTTCACTGCATCGATGAACAACGTTTCATTTGCTCTTCCAAGTAACTACTCACTCCTTCAAGCTCACCACCATGGGATCCCCGGAGTCTTCACAACCGATTTTCCGGCGAAGCCTCCGGTGAAATTTGATTACACTGGTAACAACATAAGCCGATCTCTCTACCAACCTGATAGAGGGACTAAGCTATACAAACTCAAGTATGGATCAAGGGTTCAGATTGTTCTTCAAGACACAGGTATAGTAACTCCCGAAAACCATCCCATTCATCTACACGGCTACGATTTCTACATTATCGCCGAGGGTTTCGGTAACTTCAATCCCAAGAAAGATACCGCGAAATTCAATCTTGAAGACCCGCCTCTCAGAAATACTGTCGGTGTACCTGTTAATGGTTGGGCCGTCATCAGATTCATCGCAGACAACCCTGGGGTCTGGATAATGCATTGTCATCTAGATGCACACATATCGTGGGGACTAGCCATGGCTTTTTTGGTTGAGAATGGAAATGGAGTTTTGCAGACAATAGAACAGCCTCCTCATGATTTGCCCGTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

580

Amino Acids

64.13

Weight (kDa)

9.01

Isoelectric Point (pI)

35.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 35 - 148 4.5e-42 Multicopper oxidase
Cu-oxidase PF00394 161 - 311 3.5e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 428 - 563 8e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccI GTMKAC 1 cut(s) 417
AccII CGCG 2 cut(s) 752, 1520
AciI CCGC 8 cut(s) 478, 858, 933, 945, 954, 957, 1518, 1541
AclI AACGTT 1 cut(s) 1206
AclWI GGATC 4 cut(s) 337, 1255, 1268, 1396
AcoI YGGCCR 1 cut(s) 855
AcsI RAATTY 3 cut(s) 299, 1307, 1523
AcuI CTGAAG 1 cut(s) 1132
AdeI CACNNNGTG 1 cut(s) 262
AfaI GTAC 5 cut(s) 236, 344, 373, 642, 1566
AfiI CCNNNNNNNGG 4 cut(s) 446, 944, 1358, 1574
AflIII ACRYGT 4 cut(s) 339, 750, 1037, 1181
AgeI ACCGGT 3 cut(s) 278, 345, 824
AgsI TTSAA 8 cut(s) 359, 923, 988, 1244, 1412, 1501, 1528, 1535
AjnI CCWGG 2 cut(s) 598, 1609
AleI CACNNNNGTG 2 cut(s) 379, 779
AloI GAACNNNNNNTCC 2 cut(s) 1380, 1412
AluBI AGCT 7 cut(s) 560, 746, 866, 1053, 1073, 1247, 1369
AluI AGCT 7 cut(s) 560, 746, 866, 1053, 1073, 1247, 1369
Alw21I GWGCWC 1 cut(s) 562
Alw26I GTCTC 3 cut(s) 118, 653, 1130
AlwI GGATC 4 cut(s) 337, 1255, 1268, 1396
Ama87I CYCGRG 1 cut(s) 796
AoxI GGCC 4 cut(s) 228, 793, 855, 1581
ApaI GGGCCC 1 cut(s) 232
ApoI RAATTY 3 cut(s) 299, 1307, 1523
AsiGI ACCGGT 3 cut(s) 278, 345, 824
Asp700I GAANNNNTTC 1 cut(s) 1103
AspLEI GCGC 1 cut(s) 878
AspS9I GGNCC 7 cut(s) 173, 228, 229, 293, 794, 1169, 1581
AsuC2I CCSGG 7 cut(s) 171, 227, 232, 327, 797, 798, 1266
AsuHPI GGTGA 8 cut(s) 130, 209, 512, 668, 763, 839, 1241, 1315
AvaI CYCGRG 1 cut(s) 796
AvaII GGWCC 3 cut(s) 173, 293, 1169
BaeGI GKGCMC 1 cut(s) 232
BaeI ACNNNNGTAYC 4 cut(s) 621, 624, 654, 657
BamHI GGATCC 1 cut(s) 1260
BanII GRGCYC 2 cut(s) 232, 562
BauI CACGAG 1 cut(s) 92
BbsI GAAGAC 2 cut(s) 1264, 1542
Bbv12I GWGCWC 1 cut(s) 562
BbvCI CCTCAGC 1 cut(s) 1074
BccI CCATC 3 cut(s) 593, 1121, 1449
BceAI ACGGC 3 cut(s) 1192, 1474, 1568
BcgI CGANNNNNNTGC 2 cut(s) 1632, 1666
BciT130I CCWGG 2 cut(s) 600, 1611
BcnI CCSGG 7 cut(s) 171, 227, 232, 327, 797, 798, 1266
BcoDI GTCTC 3 cut(s) 118, 653, 1130
BfaI CTAG 2 cut(s) 1637, 1661
BfoI RGCGCY 1 cut(s) 879
BisI GCNGC 2 cut(s) 858, 955
BlsI GCNGC 2 cut(s) 859, 956
Bme1390I CCNGG 9 cut(s) 171, 227, 232, 327, 600, 797, 798, 1266, 1611
Bme18I GGWCC 3 cut(s) 173, 293, 1169
BmeT110I CYCGRG 1 cut(s) 796
BmgT120I GGNCC 7 cut(s) 173, 228, 229, 293, 794, 1169, 1581
BmiI GGNNCC 4 cut(s) 230, 967, 1080, 1262
BmrFI CCNGG 9 cut(s) 171, 227, 232, 327, 600, 797, 798, 1266, 1611
BmsI GCATC 3 cut(s) 261, 1202, 1630
BpiI GAAGAC 2 cut(s) 1264, 1542
Bpu10I CCTNAGC 1 cut(s) 1074
BpuEI CTTGAG 2 cut(s) 609, 1364
BpuMI CCSGG 7 cut(s) 171, 227, 232, 327, 797, 798, 1266
Bsa29I ATCGAT 1 cut(s) 1196
BsaAI YACGTR 1 cut(s) 342
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 8 cut(s) 63, 796, 1255, 1264, 1482, 1609, 1610, 1665
BsaWI WCCGGW 8 cut(s) 278, 295, 345, 520, 551, 824, 1056, 1300
Bsc4I CCNNNNNNNGG 4 cut(s) 446, 944, 1358, 1574
Bse118I RCCGGY 3 cut(s) 278, 345, 824
Bse1I ACTGG 2 cut(s) 257, 1324
BseBI CCWGG 2 cut(s) 600, 1611
BseCI ATCGAT 1 cut(s) 1196
BseDI CCNNGG 8 cut(s) 63, 796, 1255, 1264, 1482, 1609, 1610, 1665
BseGI GGATG 2 cut(s) 10, 1441
BseLI CCNNNNNNNGG 4 cut(s) 446, 944, 1358, 1574
BseMII CTCAG 4 cut(s) 585, 699, 1065, 1561
BseNI ACTGG 2 cut(s) 257, 1324
BseRI GAGGAG 4 cut(s) 11, 49, 570, 1710
BseSI GKGCMC 1 cut(s) 232
Bsh1236I CGCG 2 cut(s) 752, 1520
BshFI GGCC 4 cut(s) 230, 795, 857, 1583
BshTI ACCGGT 3 cut(s) 278, 345, 824
BshVI ATCGAT 1 cut(s) 1196
BsiHKAI GWGCWC 1 cut(s) 562
BsiHKCI CYCGRG 1 cut(s) 796
BslFI GGGAC 5 cut(s) 470, 524, 813, 1375, 1671
BslI CCNNNNNNNGG 4 cut(s) 446, 944, 1358, 1574
BsmAI GTCTC 3 cut(s) 118, 653, 1130
BsmFI GGGAC 5 cut(s) 470, 524, 813, 1375, 1671
BsnI GGCC 4 cut(s) 230, 795, 857, 1583
Bso31I GGTCTC 1 cut(s) 1130
BsoBI CYCGRG 1 cut(s) 796
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 2 cut(s) 232, 562
Bsp143I GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
Bsp19I CCATGG 2 cut(s) 1255, 1665
BspACI CCGC 8 cut(s) 478, 858, 933, 945, 954, 957, 1518, 1541
BspANI GGCC 4 cut(s) 230, 795, 857, 1583
BspCNI CTCAG 4 cut(s) 584, 698, 1066, 1560
BspDI ATCGAT 1 cut(s) 1196
BspFNI CGCG 2 cut(s) 752, 1520
BspHI TCATGA 1 cut(s) 1723
BspLI GGNNCC 4 cut(s) 230, 967, 1080, 1262
BspPI GGATC 4 cut(s) 337, 1255, 1268, 1396
BspQI GCTCTTC 2 cut(s) 625, 1224
BspTNI GGTCTC 1 cut(s) 1130
BsrFI RCCGGY 3 cut(s) 278, 345, 824
BsrI ACTGG 2 cut(s) 257, 1324
BssAI RCCGGY 3 cut(s) 278, 345, 824
BssECI CCNNGG 8 cut(s) 63, 796, 1255, 1264, 1482, 1609, 1610, 1665
BssMI GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
BssSI CACGAG 1 cut(s) 92
BssT1I CCWWGG 2 cut(s) 1255, 1665
Bst2BI CACGAG 1 cut(s) 92
Bst2UI CCWGG 2 cut(s) 600, 1611
Bst6I CTCTTC 5 cut(s) 59, 116, 625, 1109, 1224
BstBAI YACGTR 1 cut(s) 342
BstC8I GCNNGC 1 cut(s) 387
BstDEI CTNAG 8 cut(s) 404, 571, 685, 1064, 1074, 1140, 1365, 1547
BstDSI CCRYGG 3 cut(s) 63, 1255, 1665
BstEII GGTNACC 1 cut(s) 827
BstENI CCTNNNNNAGG 1 cut(s) 1356
BstF5I GGATG 2 cut(s) 10, 1441
BstFNI CGCG 2 cut(s) 752, 1520
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 1 cut(s) 878
BstKTI GATC 7 cut(s) 332, 607, 996, 1154, 1263, 1340, 1391
BstMAI GTCTC 3 cut(s) 118, 653, 1130
BstMBI GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
BstMWI GCNNNNNNNGC 5 cut(s) 24, 80, 863, 884, 951
BstNI CCWGG 2 cut(s) 600, 1611
BstNSI RCATGY 1 cut(s) 389
BstPI GGTNACC 1 cut(s) 827
BstSCI CCNGG 9 cut(s) 169, 225, 230, 325, 598, 795, 796, 1264, 1609
BstSLI GKGCMC 1 cut(s) 232
BstUI CGCG 2 cut(s) 752, 1520
BstV2I GAAGAC 2 cut(s) 1264, 1542
BstX2I RGATCY 1 cut(s) 1260
BstYI RGATCY 1 cut(s) 1260
Bsu15I ATCGAT 1 cut(s) 1196
BsuRI GGCC 4 cut(s) 230, 795, 857, 1583
BsuTUI ATCGAT 1 cut(s) 1196
BtgI CCRYGG 3 cut(s) 63, 1255, 1665
BtgZI GCGATG 1 cut(s) 1582
BtsCI GGATG 2 cut(s) 10, 1441
BtsI GCAGTG 1 cut(s) 1188
BtsIMutI CAGTG 3 cut(s) 250, 1188, 1317
Cac8I GCNNGC 1 cut(s) 387
CciI TCATGA 1 cut(s) 1723
CfoI GCGC 1 cut(s) 878
Cfr10I RCCGGY 3 cut(s) 278, 345, 824
Cfr13I GGNCC 7 cut(s) 173, 228, 229, 293, 794, 1169, 1581
Cfr9I CCCGGG 1 cut(s) 796
ClaI ATCGAT 1 cut(s) 1196
CpoI CGGWCCG 1 cut(s) 293
CseI GACGC 4 cut(s) 521, 584, 741, 758
Csp6I GTAC 5 cut(s) 235, 343, 372, 641, 1565
CspAI ACCGGT 3 cut(s) 278, 345, 824
CspI CGGWCCG 1 cut(s) 293
CviAII CATG 6 cut(s) 386, 853, 997, 1256, 1666, 1724
CviQI GTAC 5 cut(s) 235, 343, 372, 641, 1565
DdeI CTNAG 8 cut(s) 404, 571, 685, 1064, 1074, 1140, 1365, 1547
DpnI GATC 7 cut(s) 331, 606, 995, 1153, 1262, 1339, 1390
DpnII GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
DraIII CACNNNGTG 1 cut(s) 262
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 855
Eam1104I CTCTTC 5 cut(s) 59, 116, 625, 1109, 1224
EarI CTCTTC 5 cut(s) 59, 116, 625, 1109, 1224
EciI GGCGGA 2 cut(s) 922, 972
Ecl136II GAGCTC 1 cut(s) 560
Eco130I CCWWGG 2 cut(s) 1255, 1665
Eco24I GRGCYC 2 cut(s) 232, 562
Eco31I GGTCTC 1 cut(s) 1130
Eco47I GGWCC 3 cut(s) 173, 293, 1169
Eco53kI GAGCTC 1 cut(s) 560
Eco57I CTGAAG 1 cut(s) 1132
Eco88I CYCGRG 1 cut(s) 796
Eco91I GGTNACC 1 cut(s) 827
EcoICRI GAGCTC 1 cut(s) 560
EcoNI CCTNNNNNAGG 1 cut(s) 1356
EcoO109I RGGNCCY 1 cut(s) 1169
EcoO65I GGTNACC 1 cut(s) 827
EcoRII CCWGG 2 cut(s) 598, 1609
EcoT14I CCWWGG 2 cut(s) 1255, 1665
EcoT22I ATGCAT 1 cut(s) 1629
EcoT38I GRGCYC 2 cut(s) 232, 562
ErhI CCWWGG 2 cut(s) 1255, 1665
FaeI CATG 6 cut(s) 389, 856, 1000, 1259, 1669, 1727
FalI AAGNNNNNCTT 2 cut(s) 360, 392
FaqI GGGAC 5 cut(s) 470, 524, 813, 1375, 1671
FatI CATG 6 cut(s) 385, 852, 996, 1255, 1665, 1723
FauI CCCGC 1 cut(s) 1548
FblI GTMKAC 1 cut(s) 417
Fnu4HI GCNGC 2 cut(s) 858, 955
FokI GGATG 2 cut(s) 17, 1428
FriOI GRGCYC 2 cut(s) 232, 562
Fsp4HI GCNGC 2 cut(s) 858, 955
FspBI CTAG 2 cut(s) 1637, 1661
GlaI GCGC 1 cut(s) 877
GluI GCNGC 2 cut(s) 858, 955
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 4 cut(s) 230, 795, 857, 1583
HgaI GACGC 4 cut(s) 521, 584, 741, 758
HhaI GCGC 1 cut(s) 878
Hin1II CATG 6 cut(s) 389, 856, 1000, 1259, 1669, 1727
Hin6I GCGC 1 cut(s) 876
HinP1I GCGC 1 cut(s) 876
HincII GTYRAC 2 cut(s) 190, 596
HindII GTYRAC 2 cut(s) 190, 596
HindIII AAGCTT 1 cut(s) 1051
HinfI GANTC 5 cut(s) 539, 1099, 1119, 1269, 1593
HphI GGTGA 8 cut(s) 130, 209, 512, 668, 763, 839, 1241, 1315
Hpy166II GTNNAC 7 cut(s) 190, 351, 374, 418, 425, 596, 1565
Hpy188III TCNNGA 8 cut(s) 626, 1155, 1412, 1433, 1532, 1618, 1637, 1724
Hpy8I GTNNAC 7 cut(s) 190, 351, 374, 418, 425, 596, 1565
Hpy99I CGWCG 3 cut(s) 44, 212, 1097
HpyAV CCTTC 7 cut(s) 362, 503, 778, 929, 967, 994, 1250
HpyCH4IV ACGT 6 cut(s) 341, 483, 780, 1039, 1183, 1206
HpyCH4V TGCA 4 cut(s) 1193, 1627, 1643, 1702
HpyF10VI GCNNNNNNNGC 5 cut(s) 24, 80, 863, 884, 951
HpyF3I CTNAG 8 cut(s) 404, 571, 685, 1064, 1074, 1140, 1365, 1547
HpySE526I ACGT 6 cut(s) 341, 483, 780, 1039, 1183, 1206
Hsp92II CATG 6 cut(s) 389, 856, 1000, 1259, 1669, 1727
HspAI GCGC 1 cut(s) 876
Kzo9I GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
LguI GCTCTTC 2 cut(s) 625, 1224
LmnI GCTCC 3 cut(s) 557, 565, 743
LweI GCATC 3 cut(s) 261, 1202, 1630
MaeI CTAG 2 cut(s) 1637, 1661
MaeII ACGT 6 cut(s) 341, 483, 780, 1039, 1183, 1206
MalI GATC 7 cut(s) 331, 606, 995, 1153, 1262, 1339, 1390
MboI GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
MflI RGATCY 1 cut(s) 1260
MhlI GDGCHC 2 cut(s) 232, 562
MluCI AATT 5 cut(s) 299, 354, 979, 1307, 1523
MluI ACGCGT 1 cut(s) 750
MlyI GAGTC 2 cut(s) 1113, 1278
MmeI TCCRAC 2 cut(s) 721, 1106
Mph1103I ATGCAT 1 cut(s) 1629
MroXI GAANNNNTTC 1 cut(s) 1103
MseI TTAA 2 cut(s) 692, 1572
MslI CAYNNNNRTG 4 cut(s) 379, 779, 1254, 1638
MspR9I CCNGG 9 cut(s) 171, 227, 232, 327, 600, 797, 798, 1266, 1611
MvaI CCWGG 2 cut(s) 600, 1611
MvnI CGCG 2 cut(s) 752, 1520
MwoI GCNNNNNNNGC 5 cut(s) 24, 80, 863, 884, 951
NciI CCSGG 7 cut(s) 171, 227, 232, 327, 797, 798, 1266
NcoI CCATGG 2 cut(s) 1255, 1665
NdeII GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
NlaIII CATG 6 cut(s) 389, 856, 1000, 1259, 1669, 1727
NlaIV GGNNCC 4 cut(s) 230, 967, 1080, 1262
NmeAIII GCCGAG 1 cut(s) 1507
NmuCI GTSAC 6 cut(s) 7, 197, 304, 827, 1033, 1059
NsiI ATGCAT 1 cut(s) 1629
NspI RCATGY 1 cut(s) 389
OliI CACNNNNGTG 2 cut(s) 379, 779
PaeI GCATGC 1 cut(s) 389
PagI TCATGA 1 cut(s) 1723
PasI CCCWGGG 1 cut(s) 1610
PciSI GCTCTTC 2 cut(s) 625, 1224
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 3 cut(s) 539, 1099, 1593
PflFI GACNNNGTC 1 cut(s) 1122
PinAI ACCGGT 3 cut(s) 278, 345, 824
PkrI GCNGC 2 cut(s) 859, 956
PleI GAGTC 2 cut(s) 1113, 1277
PpsI GAGTC 2 cut(s) 1113, 1277
Ppu21I YACGTR 1 cut(s) 342
PpuMI RGGWCCY 1 cut(s) 1169
Psp124BI GAGCTC 1 cut(s) 562
Psp1406I AACGTT 1 cut(s) 1206
Psp5II RGGWCCY 1 cut(s) 1169
Psp6I CCWGG 2 cut(s) 598, 1609
PspEI GGTNACC 1 cut(s) 827
PspGI CCWGG 2 cut(s) 598, 1609
PspN4I GGNNCC 4 cut(s) 230, 967, 1080, 1262
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 7 cut(s) 173, 228, 229, 293, 794, 1169, 1581
PspPPI RGGWCCY 1 cut(s) 1169
PsuI RGATCY 1 cut(s) 1260
PsyI GACNNNGTC 1 cut(s) 1122
RsaI GTAC 5 cut(s) 236, 344, 373, 642, 1566
RsaNI GTAC 5 cut(s) 235, 343, 372, 641, 1565
RseI CAYNNNNRTG 4 cut(s) 379, 779, 1254, 1638
Rsr2I CGGWCCG 1 cut(s) 293
RsrII CGGWCCG 1 cut(s) 293
SacI GAGCTC 1 cut(s) 562
SapI GCTCTTC 2 cut(s) 625, 1224
SaqAI TTAA 2 cut(s) 692, 1572
SatI GCNGC 2 cut(s) 858, 955
Sau3AI GATC 7 cut(s) 329, 604, 993, 1151, 1260, 1337, 1388
Sau96I GGNCC 7 cut(s) 173, 228, 229, 293, 794, 1169, 1581
SchI GAGTC 2 cut(s) 1113, 1278
ScrFI CCNGG 9 cut(s) 171, 227, 232, 327, 600, 797, 798, 1266, 1611
SduI GDGCHC 2 cut(s) 232, 562
SfaNI GCATC 3 cut(s) 261, 1202, 1630
SinI GGWCC 3 cut(s) 173, 293, 1169
SmaI CCCGGG 1 cut(s) 798
SmiMI CAYNNNNRTG 4 cut(s) 379, 779, 1254, 1638
SmlI CTYRAG 2 cut(s) 624, 1379
SmoI CTYRAG 2 cut(s) 624, 1379
SphI GCATGC 1 cut(s) 389
Sse9I AATT 5 cut(s) 299, 354, 979, 1307, 1523
SsiI CCGC 8 cut(s) 478, 858, 933, 945, 954, 957, 1518, 1541
SspMI CTAG 2 cut(s) 1637, 1661
SstI GAGCTC 1 cut(s) 562
StyD4I CCNGG 9 cut(s) 169, 225, 230, 325, 598, 795, 796, 1264, 1609
StyI CCWWGG 2 cut(s) 1255, 1665
TaiI ACGT 6 cut(s) 344, 486, 783, 1042, 1186, 1209
TaqI TCGA 2 cut(s) 1092, 1196
TaqII GACCGA 1 cut(s) 1112
TasI AATT 5 cut(s) 299, 354, 979, 1307, 1523
TauI GCSGC 2 cut(s) 860, 957
TfiI GAWTC 3 cut(s) 539, 1099, 1593
Tru1I TTAA 2 cut(s) 692, 1572
Tru9I TTAA 2 cut(s) 692, 1572
TscAI CASTG 3 cut(s) 257, 1195, 1324
TseFI GTSAC 6 cut(s) 7, 197, 304, 827, 1033, 1059
Tsp45I GTSAC 6 cut(s) 7, 197, 304, 827, 1033, 1059
TspDTI ATGAA 6 cut(s) 19, 88, 1200, 1214, 1439, 1585
TspGWI ACGGA 2 cut(s) 52, 306
TspMI CCCGGG 1 cut(s) 796
TspRI CASTG 3 cut(s) 257, 1195, 1324
Tth111I GACNNNGTC 1 cut(s) 1122
VpaK11BI GGWCC 3 cut(s) 173, 293, 1169
XagI CCTNNNNNAGG 1 cut(s) 1356
XapI RAATTY 3 cut(s) 299, 1307, 1523
XbaI TCTAGA 1 cut(s) 1636
XceI RCATGY 1 cut(s) 389
XcmI CCANNNNNNNNNTGG 1 cut(s) 1672
XmaI CCCGGG 1 cut(s) 796
XmiI GTMKAC 1 cut(s) 417
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 2 cut(s) 1637, 1661
Zsp2I ATGCAT 1 cut(s) 1629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.