Rroxscaffold_4G00312800

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001265
Physical Location & Seq
Reverse (-)
35981518 .. 35984641
3124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00312800.1

Sequence Viewer

Length: 1530 bp
ATGAGAACCGGATGGGCGGATGGGCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGGAGTTACAACTACCGGTTCACAGTCCAAGGTCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCACCCGAAACAAGGAGACTTGTTTCCATTCACTAAACCGAATCGTCAAGCAACACTTCTTCTTGGTGAGTGGTGGGATGGTAACCCTATTGACGTGGTGAAGAGGGCGACTCGCACAGGAGCAGCTCCAAATGTTTCTAACGCATATACCATTAACGGCCAACCCGGAGATCTTTACAGTTGCTCCAGCAAAGGCACCGTCATAGTTCCAATAGACTCTGGTGAGACCAACCTGCTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCCTCATACACCAAGCCTTTCACCACCAAAGTTCTCATGCTAGGCCCAGGCCAGACTACTGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCGAGTGCCTATTTCAGTGCACAAAATGCTGCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTTCGTTGCAACACTACAAGTTGCAAACAGGGTAAAACAGTAATTAAACCCACAATGCCAAAGCTGCCAGCTTTCAATGACACAAACACTGCATCTGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGTCTCGGACTCAACAAATGCCCCAAGCACTTTCCATCTAGAAGGTGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCACGGAAATTTGATTACACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGGATACAAGTTGAAGTACGGGTCTAGAGTGCAGGTGGTGTTACAAGACACAAGTATTGTCACACCCGAGGACCATCCCATTCATCTCCACGGTTATGATTTCTACATCCTTGCAGAGGGTTTTGGAAATTTCAACCCCAAGACTGATACTAAAATGTTTAATCTTGTCGATCCACCTCTAAGGAACACGGTCGCGGTGCCCGCAAATGGTTGGGCAGTCATCAGATTTGTGGCTGACAATCCAGAACCAAAAGTGATGACAAATGGAACATCTTATGGGAAGCTCAAGATCTTGGCTTCTTCTTTTTCTCCTCGAAGAGTGCCAAATGTGATATTCCGAAACCTTCGGGACCTTGAAATGGACTCCACGAATAGCACGAATAGAATGCCCCGTACGACCAAATCCAGCAATGAGCGCCTCGTCATTCTGTTCAATGTAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

509

Amino Acids

56.36

Weight (kDa)

9.58

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 2 - 59 8.4e-20 Multicopper oxidase
Cu-oxidase PF00394 72 - 220 4.3e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 335 - 445 4.4e-28 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1108
Acc36I ACCTGC 2 cut(s) 405, 1108
AccB1I GGYRCC 3 cut(s) 359, 882, 1282
AccBSI CCGCTC 1 cut(s) 1056
AccII CGCG 1 cut(s) 1280
AciI CCGC 7 cut(s) 17, 417, 587, 1019, 1054, 1280, 1287
AclWI GGATC 1 cut(s) 1250
AcoI YGGCCR 1 cut(s) 322
AcsI RAATTY 2 cut(s) 1028, 1213
AcuI CTGAAG 1 cut(s) 760
AfaI GTAC 3 cut(s) 103, 1103, 1480
AfiI CCNNNNNNNGG 5 cut(s) 176, 1076, 1201, 1292, 1444
AflIII ACRYGT 1 cut(s) 951
AgeI ACCGGT 1 cut(s) 75
AgsI TTSAA 6 cut(s) 653, 739, 1099, 1219, 1442, 1519
AhlI ACTAGT 1 cut(s) 998
AjiI CACGTC 1 cut(s) 259
AjnI CCWGG 3 cut(s) 55, 526, 985
AluBI AGCT 7 cut(s) 126, 290, 727, 734, 774, 968, 1369
AluI AGCT 7 cut(s) 126, 290, 727, 734, 774, 968, 1369
Alw21I GWGCWC 2 cut(s) 157, 610
Alw26I GTCTC 4 cut(s) 174, 383, 845, 934
Alw44I GTGCAC 1 cut(s) 606
AlwI GGATC 1 cut(s) 1250
Ama87I CYCGRG 2 cut(s) 26, 1151
AoxI GGCC 5 cut(s) 23, 322, 523, 529, 889
ApaI GGGCCC 1 cut(s) 27
ApaLI GTGCAC 1 cut(s) 606
ApeKI GCWGC 3 cut(s) 287, 617, 727
ApoI RAATTY 2 cut(s) 1028, 1213
ArsI GACNNNNNNTTYG 4 cut(s) 348, 380, 938, 970
AsiGI ACCGGT 1 cut(s) 75
Asp700I GAANNNNTTC 1 cut(s) 824
AspLEI GCGC 1 cut(s) 1503
AspS9I GGNCC 7 cut(s) 23, 24, 524, 559, 890, 1156, 1435
AsuC2I CCSGG 2 cut(s) 330, 556
AsuHPI GGTGA 6 cut(s) 158, 242, 274, 398, 493, 544
AsuNHI GCTAGC 1 cut(s) 914
AvaI CYCGRG 2 cut(s) 26, 1151
AvaII GGWCC 3 cut(s) 559, 1156, 1435
BaeGI GKGCMC 3 cut(s) 27, 610, 1287
BanI GGYRCC 3 cut(s) 359, 882, 1282
BanII GRGCYC 1 cut(s) 27
Bbv12I GWGCWC 2 cut(s) 157, 610
BbvI GCAGC 3 cut(s) 299, 604, 714
BccI CCATC 6 cut(s) 6, 14, 236, 577, 880, 1167
BceAI ACGGC 1 cut(s) 337
BcgI CGANNNNNNTGC 2 cut(s) 1453, 1487
BciT130I CCWGG 3 cut(s) 57, 528, 987
BciVI GTATCC 1 cut(s) 1082
BcnI CCSGG 2 cut(s) 330, 556
BcoDI GTCTC 4 cut(s) 174, 383, 845, 934
BcuI ACTAGT 1 cut(s) 998
BfaI CTAG 6 cut(s) 521, 786, 876, 915, 999, 1110
BfoI RGCGCY 1 cut(s) 1504
BfuAI ACCTGC 2 cut(s) 405, 1108
BfuI GTATCC 1 cut(s) 1082
BglI GCCNNNNNGGC 1 cut(s) 897
BglII AGATCT 2 cut(s) 334, 1374
BisI GCNGC 6 cut(s) 288, 417, 588, 618, 728, 1054
BlsI GCNGC 6 cut(s) 289, 418, 589, 619, 729, 1055
Bme1390I CCNGG 5 cut(s) 57, 330, 528, 556, 987
Bme18I GGWCC 3 cut(s) 559, 1156, 1435
BmeT110I CYCGRG 2 cut(s) 26, 1151
BmgBI CACGTC 1 cut(s) 259
BmgT120I GGNCC 7 cut(s) 23, 24, 524, 559, 890, 1156, 1435
BmiI GGNNCC 7 cut(s) 25, 361, 560, 884, 892, 1284, 1436
BmrFI CCNGG 5 cut(s) 57, 330, 528, 556, 987
BmrI ACTGGG 2 cut(s) 1050, 1065
BmsI GCATC 2 cut(s) 469, 764
BmtI GCTAGC 1 cut(s) 918
BmuI ACTGGG 2 cut(s) 1050, 1065
BplI GAGNNNNNCTC 2 cut(s) 259, 291
BpmI CTGGAG 2 cut(s) 334, 1008
BpuEI CTTGAG 1 cut(s) 1355
BpuMI CCSGG 2 cut(s) 330, 556
BsaI GGTCTC 2 cut(s) 383, 845
BsaJI CCNNGG 7 cut(s) 88, 526, 555, 886, 1022, 1152, 1174
BsaWI WCCGGW 2 cut(s) 8, 75
BsaXI ACNNNNNCTCC 2 cut(s) 332, 362
Bsc4I CCNNNNNNNGG 5 cut(s) 176, 1076, 1201, 1292, 1444
Bse118I RCCGGY 1 cut(s) 75
Bse1I ACTGG 2 cut(s) 1045, 1071
Bse3DI GCAATG 1 cut(s) 1501
BseBI CCWGG 3 cut(s) 57, 528, 987
BseDI CCNNGG 7 cut(s) 88, 526, 555, 886, 1022, 1152, 1174
BseGI GGATG 5 cut(s) 17, 25, 247, 1159, 1191
BseLI CCNNNNNNNGG 5 cut(s) 176, 1076, 1201, 1292, 1444
BseMI GCAATG 1 cut(s) 1501
BseMII CTCAG 1 cut(s) 392
BseNI ACTGG 2 cut(s) 1045, 1071
BseRI GAGGAG 1 cut(s) 1386
BseSI GKGCMC 3 cut(s) 27, 610, 1287
BseXI GCAGC 3 cut(s) 299, 604, 714
BsgI GTGCAG 1 cut(s) 1136
Bsh1236I CGCG 1 cut(s) 1280
Bsh1285I CGRYCG 1 cut(s) 1278
BshFI GGCC 5 cut(s) 25, 324, 525, 531, 891
BshNI GGYRCC 3 cut(s) 359, 882, 1282
BshTI ACCGGT 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 1278
BsiHKAI GWGCWC 2 cut(s) 157, 610
BsiHKCI CYCGRG 2 cut(s) 26, 1151
BsiSI CCGG 4 cut(s) 9, 76, 330, 555
BsiWI CGTACG 1 cut(s) 1478
BslFI GGGAC 3 cut(s) 572, 785, 1448
BslI CCNNNNNNNGG 5 cut(s) 176, 1076, 1201, 1292, 1444
BsmAI GTCTC 4 cut(s) 174, 383, 845, 934
BsmFI GGGAC 3 cut(s) 572, 785, 1448
BsmI GAATGC 1 cut(s) 1476
BsnI GGCC 5 cut(s) 25, 324, 525, 531, 891
Bso31I GGTCTC 2 cut(s) 383, 845
BsoBI CYCGRG 2 cut(s) 26, 1151
Bsp120I GGGCCC 1 cut(s) 23
Bsp1286I GDGCHC 4 cut(s) 27, 157, 610, 1287
Bsp143I GATC 3 cut(s) 334, 1255, 1374
BspACI CCGC 7 cut(s) 17, 417, 587, 1019, 1054, 1280, 1287
BspANI GGCC 5 cut(s) 25, 324, 525, 531, 891
BspCNI CTCAG 1 cut(s) 393
BspFNI CGCG 1 cut(s) 1280
BspLI GGNNCC 7 cut(s) 25, 361, 560, 884, 892, 1284, 1436
BspMI ACCTGC 2 cut(s) 405, 1108
BspOI GCTAGC 1 cut(s) 918
BspPI GGATC 1 cut(s) 1250
BspT107I GGYRCC 3 cut(s) 359, 882, 1282
BspTNI GGTCTC 2 cut(s) 383, 845
BsrBI CCGCTC 1 cut(s) 1056
BsrDI GCAATG 1 cut(s) 1501
BsrFI RCCGGY 1 cut(s) 75
BsrI ACTGG 2 cut(s) 1045, 1071
BssAI RCCGGY 1 cut(s) 75
BssECI CCNNGG 7 cut(s) 88, 526, 555, 886, 1022, 1152, 1174
BssMI GATC 3 cut(s) 334, 1255, 1374
BssT1I CCWWGG 2 cut(s) 88, 886
Bst2UI CCWGG 3 cut(s) 57, 528, 987
Bst4CI ACNGT 8 cut(s) 85, 145, 344, 364, 466, 703, 1178, 1276
Bst6I CTCTTC 3 cut(s) 260, 830, 1396
BstAPI GCANNNNNTGC 1 cut(s) 614
BstC8I GCNNGC 5 cut(s) 117, 732, 916, 1058, 1287
BstDEI CTNAG 4 cut(s) 134, 401, 768, 1265
BstDSI CCRYGG 2 cut(s) 1022, 1174
BstEII GGTNACC 1 cut(s) 245
BstENI CCTNNNNNAGG 1 cut(s) 1199
BstF5I GGATG 5 cut(s) 17, 25, 247, 1159, 1191
BstFNI CGCG 1 cut(s) 1280
BstH2I RGCGCY 1 cut(s) 1504
BstHHI GCGC 1 cut(s) 1503
BstKTI GATC 3 cut(s) 337, 1258, 1377
BstMAI GTCTC 4 cut(s) 174, 383, 845, 934
BstMBI GATC 3 cut(s) 334, 1255, 1374
BstMCI CGRYCG 1 cut(s) 1278
BstMWI GCNNNNNNNGC 7 cut(s) 593, 614, 727, 780, 897, 1286, 1500
BstNI CCWGG 3 cut(s) 57, 528, 987
BstNSI RCATGY 1 cut(s) 955
BstPI GGTNACC 1 cut(s) 245
BstSCI CCNGG 5 cut(s) 55, 328, 526, 554, 985
BstSLI GKGCMC 3 cut(s) 27, 610, 1287
BstUI CGCG 1 cut(s) 1280
BstV1I GCAGC 3 cut(s) 299, 604, 714
BstX2I RGATCY 2 cut(s) 334, 1374
BstYI RGATCY 2 cut(s) 334, 1374
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 5 cut(s) 25, 324, 525, 531, 891
BtgI CCRYGG 2 cut(s) 1022, 1174
BtrI CACGTC 1 cut(s) 259
BtsCI GGATG 5 cut(s) 17, 25, 247, 1159, 1191
BtsI GCAGTG 2 cut(s) 750, 909
BtsIMutI CAGTG 4 cut(s) 610, 750, 909, 1038
BveI ACCTGC 2 cut(s) 405, 1108
Cac8I GCNNGC 5 cut(s) 117, 732, 916, 1058, 1287
CfoI GCGC 1 cut(s) 1503
Cfr10I RCCGGY 1 cut(s) 75
Cfr13I GGNCC 7 cut(s) 23, 24, 524, 559, 890, 1156, 1435
Csp6I GTAC 3 cut(s) 102, 1102, 1479
CspAI ACCGGT 1 cut(s) 75
CviAII CATG 4 cut(s) 129, 517, 919, 952
CviQI GTAC 3 cut(s) 102, 1102, 1479
DdeI CTNAG 4 cut(s) 134, 401, 768, 1265
DpnI GATC 3 cut(s) 336, 1257, 1376
DpnII GATC 3 cut(s) 334, 1255, 1374
EaeI YGGCCR 1 cut(s) 322
Eam1104I CTCTTC 3 cut(s) 260, 830, 1396
EarI CTCTTC 3 cut(s) 260, 830, 1396
EciI GGCGGA 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 88, 886
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 2 cut(s) 383, 845
Eco47I GGWCC 3 cut(s) 559, 1156, 1435
Eco57I CTGAAG 1 cut(s) 760
Eco88I CYCGRG 2 cut(s) 26, 1151
Eco91I GGTNACC 1 cut(s) 245
EcoNI CCTNNNNNAGG 1 cut(s) 1199
EcoO109I RGGNCCY 2 cut(s) 890, 1435
EcoO65I GGTNACC 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 55, 526, 985
EcoT14I CCWWGG 2 cut(s) 88, 886
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 2 cut(s) 88, 886
FaeI CATG 4 cut(s) 132, 520, 922, 955
FalI AAGNNNNNCTT 2 cut(s) 204, 236
FaqI GGGAC 3 cut(s) 572, 785, 1448
FatI CATG 4 cut(s) 128, 516, 918, 951
FauI CCCGC 2 cut(s) 1026, 1294
Fnu4HI GCNGC 6 cut(s) 288, 417, 588, 618, 728, 1054
FokI GGATG 5 cut(s) 24, 32, 254, 1146, 1178
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 6 cut(s) 288, 417, 588, 618, 728, 1054
FspBI CTAG 6 cut(s) 521, 786, 876, 915, 999, 1110
GlaI GCGC 1 cut(s) 1502
GluI GCNGC 6 cut(s) 288, 417, 588, 618, 728, 1054
GsuI CTGGAG 2 cut(s) 334, 1008
HaeII RGCGCY 1 cut(s) 1504
HaeIII GGCC 5 cut(s) 25, 324, 525, 531, 891
HapII CCGG 4 cut(s) 9, 76, 330, 555
HhaI GCGC 1 cut(s) 1503
Hin1II CATG 4 cut(s) 132, 520, 922, 955
Hin6I GCGC 1 cut(s) 1501
HinP1I GCGC 1 cut(s) 1501
HindIII AAGCTT 1 cut(s) 966
HinfI GANTC 5 cut(s) 205, 274, 380, 846, 1448
HpaII CCGG 4 cut(s) 9, 76, 330, 555
HphI GGTGA 6 cut(s) 158, 242, 274, 398, 493, 544
Hpy166II GTNNAC 3 cut(s) 81, 608, 994
Hpy188I TCNGA 4 cut(s) 779, 845, 1310, 1424
Hpy188III TCNNGA 9 cut(s) 95, 573, 650, 876, 1077, 1110, 1328, 1372, 1433
Hpy8I GTNNAC 3 cut(s) 81, 608, 994
Hpy99I CGWCG 2 cut(s) 449, 818
HpyAV CCTTC 4 cut(s) 92, 772, 873, 1439
HpyCH4III ACNGT 8 cut(s) 85, 145, 344, 364, 466, 703, 1178, 1276
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 7 cut(s) 608, 620, 672, 687, 755, 1117, 1199
HpyF10VI GCNNNNNNNGC 7 cut(s) 593, 614, 727, 780, 897, 1286, 1500
HpyF3I CTNAG 4 cut(s) 134, 401, 768, 1265
HpySE526I ACGT 1 cut(s) 258
Hsp92II CATG 4 cut(s) 132, 520, 922, 955
HspAI GCGC 1 cut(s) 1501
Kzo9I GATC 3 cut(s) 334, 1255, 1374
LmnI GCTCC 4 cut(s) 152, 284, 295, 353
Lsp1109I GCAGC 3 cut(s) 299, 604, 714
LweI GCATC 2 cut(s) 469, 764
MaeI CTAG 6 cut(s) 521, 786, 876, 915, 999, 1110
MaeII ACGT 1 cut(s) 258
MaeIII GTNAC 5 cut(s) 34, 65, 245, 1125, 1144
MalI GATC 3 cut(s) 336, 1257, 1376
MbiI CCGCTC 1 cut(s) 1056
MboI GATC 3 cut(s) 334, 1255, 1374
MboII GAAGA 7 cut(s) 215, 277, 430, 817, 820, 1377, 1413
MflI RGATCY 2 cut(s) 334, 1374
MhlI GDGCHC 4 cut(s) 27, 157, 610, 1287
MluCI AATT 4 cut(s) 705, 957, 1028, 1213
MlyI GAGTC 4 cut(s) 268, 374, 840, 1442
MroXI GAANNNNTTC 1 cut(s) 824
MseI TTAA 4 cut(s) 318, 548, 708, 1245
MslI CAYNNNNRTG 1 cut(s) 1179
MspI CCGG 4 cut(s) 9, 76, 330, 555
MspR9I CCNGG 5 cut(s) 57, 330, 528, 556, 987
Mva1269I GAATGC 1 cut(s) 1476
MvaI CCWGG 3 cut(s) 57, 528, 987
MvnI CGCG 1 cut(s) 1280
MwoI GCNNNNNNNGC 7 cut(s) 593, 614, 727, 780, 897, 1286, 1500
NciI CCSGG 2 cut(s) 330, 556
NdeII GATC 3 cut(s) 334, 1255, 1374
NheI GCTAGC 1 cut(s) 914
NlaIII CATG 4 cut(s) 132, 520, 922, 955
NlaIV GGNNCC 7 cut(s) 25, 361, 560, 884, 892, 1284, 1436
NmuCI GTSAC 1 cut(s) 1144
NspI RCATGY 1 cut(s) 955
PaqCI CACCTGC 1 cut(s) 1108
PciI ACATGT 1 cut(s) 951
PcsI WCGNNNNNNNCGW 1 cut(s) 1460
PctI GAATGC 1 cut(s) 1476
PdmI GAANNNNTTC 1 cut(s) 824
PfeI GAWTC 1 cut(s) 205
Pfl23II CGTACG 1 cut(s) 1478
PfoI TCCNGGA 1 cut(s) 985
PinAI ACCGGT 1 cut(s) 75
PkrI GCNGC 6 cut(s) 289, 418, 589, 619, 729, 1055
PleI GAGTC 4 cut(s) 268, 374, 840, 1442
PpsI GAGTC 4 cut(s) 268, 374, 840, 1442
PpuMI RGGWCCY 1 cut(s) 1435
PscI ACATGT 1 cut(s) 951
Psp5II RGGWCCY 1 cut(s) 1435
Psp6I CCWGG 3 cut(s) 55, 526, 985
PspEI GGTNACC 1 cut(s) 245
PspGI CCWGG 3 cut(s) 55, 526, 985
PspLI CGTACG 1 cut(s) 1478
PspN4I GGNNCC 7 cut(s) 25, 361, 560, 884, 892, 1284, 1436
PspOMI GGGCCC 1 cut(s) 23
PspPI GGNCC 7 cut(s) 23, 24, 524, 559, 890, 1156, 1435
PspPPI RGGWCCY 1 cut(s) 1435
PsuI RGATCY 2 cut(s) 334, 1374
RsaI GTAC 3 cut(s) 103, 1103, 1480
RsaNI GTAC 3 cut(s) 102, 1102, 1479
RseI CAYNNNNRTG 1 cut(s) 1179
SaqAI TTAA 4 cut(s) 318, 548, 708, 1245
SatI GCNGC 6 cut(s) 288, 417, 588, 618, 728, 1054
Sau3AI GATC 3 cut(s) 334, 1255, 1374
Sau96I GGNCC 7 cut(s) 23, 24, 524, 559, 890, 1156, 1435
SchI GAGTC 4 cut(s) 268, 374, 840, 1442
ScrFI CCNGG 5 cut(s) 57, 330, 528, 556, 987
SduI GDGCHC 4 cut(s) 27, 157, 610, 1287
SfaNI GCATC 2 cut(s) 469, 764
SinI GGWCC 3 cut(s) 559, 1156, 1435
SmiMI CAYNNNNRTG 1 cut(s) 1179
SmlI CTYRAG 1 cut(s) 1370
SmoI CTYRAG 1 cut(s) 1370
SpeI ACTAGT 1 cut(s) 998
Sse9I AATT 4 cut(s) 705, 957, 1028, 1213
SsiI CCGC 7 cut(s) 17, 417, 587, 1019, 1054, 1280, 1287
SspMI CTAG 6 cut(s) 521, 786, 876, 915, 999, 1110
StyD4I CCNGG 5 cut(s) 55, 328, 526, 554, 985
StyI CCWWGG 2 cut(s) 88, 886
TaaI ACNGT 8 cut(s) 85, 145, 344, 364, 466, 703, 1178, 1276
TaiI ACGT 1 cut(s) 261
TaqI TCGA 5 cut(s) 574, 795, 813, 1254, 1399
TaqII GACCGA 1 cut(s) 827
TasI AATT 4 cut(s) 705, 957, 1028, 1213
TauI GCSGC 3 cut(s) 419, 590, 1056
TfiI GAWTC 1 cut(s) 205
Tru1I TTAA 4 cut(s) 318, 548, 708, 1245
Tru9I TTAA 4 cut(s) 318, 548, 708, 1245
TscAI CASTG 4 cut(s) 610, 757, 916, 1045
TseFI GTSAC 1 cut(s) 1144
TseI GCWGC 3 cut(s) 287, 617, 727
Tsp45I GTSAC 1 cut(s) 1144
TspDTI ATGAA 2 cut(s) 935, 1157
TspGWI ACGGA 3 cut(s) 433, 652, 1039
TspRI CASTG 4 cut(s) 610, 757, 916, 1045
VneI GTGCAC 1 cut(s) 606
VpaK11BI GGWCC 3 cut(s) 559, 1156, 1435
XagI CCTNNNNNAGG 1 cut(s) 1199
XapI RAATTY 2 cut(s) 1028, 1213
XbaI TCTAGA 2 cut(s) 875, 1109
XceI RCATGY 1 cut(s) 955
XcmI CCANNNNNNNNNTGG 1 cut(s) 893
XmnI GAANNNNTTC 1 cut(s) 824
XspI CTAG 6 cut(s) 521, 786, 876, 915, 999, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.