RchiOBHm_Chr1g0341781

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001265
Physical Location & Seq
Reverse (-)
33606773 .. 33608661
1889 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56846

Sequence Viewer

Length: 1425 bp
ATGCTCGTTCTAGCACATGCCGGGGGGAGTTACACCCACCGGTTCACAGTCCAGGGCCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCAAAACAAGGAGACTCGTATCCATTCCCTAAACCAAATCGTCAAGCAACACTTCTTCTCGGTGAGTGGTGGGACGCTAACCCTATTGACGTGGTCAGGAGAGCAACTCGCACAGGAGCAGCTCCGAATGTTTCTGATGCATACACCATTAACGGTCAACCTGGTGATCTTTACAATTGCTCCAGCAAAGGGACTATCGTAGTTCCCATAGACTCCGGTGAGACCAACCTTTTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAACCACAAGCTGACTGTGGTCGGTGCTGATGCCTCCTACACCAAGCCTTTCACCACCAAAGTTCTAATGCTAGGACCCGGCCAGACCACCGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCACGTGCCTATTTCAGTGCACAAAACGCGCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTCCGTTGCAACACTACTAGTTGCAAAAAGGGTAAAACAGTAATTAAACCCATAATGCCAAAGCTGCCAGCTTTCAATGACACAAACACTGCATCTGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGTCTCGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGGTGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCACGGAAATTTGATTACACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGGATACAAGTTGAAGTATGGGTCTAGAGTTCAGGTGGTGTTACAAGACACAAGTACTGTCACACCAGAGAACCATCCAATTCATCTTCATGGATACGATTTCTACATCCTTGCAGAGGGTTTTGGAAACTTCAACGTCAAGACTGATACTAAAAAGTTTAACCTTGTTGATCCACCTCTGAGGAACACTGTGTCGGTGCCCGCAAATGGTTGGGCAGTCATCCGATTTGTAGCTGACAATCCAGGTGCTTGGGTGATGCATTGTCACTTGGATGTACATATCAACTGGGGTTTGGCAATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAGACAATAGAGCCTCCGCCTGCAGATTTGCCTCTGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

474

Amino Acids

52.32

Weight (kDa)

9.21

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 7 - 47 2.4e-09 Multicopper oxidase
Cu-oxidase PF00394 60 - 208 8.8e-42 Multicopper oxidase
Cu-oxidase_2 PF07731 323 - 456 3.5e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 846, 1246
AccBSI CCGCTC 1 cut(s) 1020
AccII CGCG 1 cut(s) 581
AciI CCGC 6 cut(s) 381, 551, 983, 1018, 1251, 1400
AclWI GGATC 1 cut(s) 1214
AcoI YGGCCR 1 cut(s) 493
AcsI RAATTY 1 cut(s) 992
AcuI CTGAAG 1 cut(s) 724
AcvI CACGTG 1 cut(s) 557
AfaI GTAC 3 cut(s) 67, 1105, 1326
AfiI CCNNNNNNNGG 5 cut(s) 140, 321, 1040, 1165, 1256
AflIII ACRYGT 1 cut(s) 915
AgeI ACCGGT 1 cut(s) 39
AgsI TTSAA 4 cut(s) 617, 703, 1063, 1183
AhlI ACTAGT 2 cut(s) 644, 962
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 4 cut(s) 51, 292, 949, 1291
AluBI AGCT 9 cut(s) 90, 254, 424, 691, 698, 738, 932, 1283, 1381
AluI AGCT 9 cut(s) 90, 254, 424, 691, 698, 738, 932, 1283, 1381
Alw21I GWGCWC 2 cut(s) 121, 574
Alw26I GTCTC 4 cut(s) 138, 347, 809, 898
Alw44I GTGCAC 1 cut(s) 570
AlwI GGATC 1 cut(s) 1214
AoxI GGCC 3 cut(s) 55, 493, 853
ApaLI GTGCAC 1 cut(s) 570
ApeKI GCWGC 3 cut(s) 251, 691, 1381
ApoI RAATTY 1 cut(s) 992
ArsI GACNNNNNNTTYG 4 cut(s) 346, 378, 902, 934
AsiGI ACCGGT 1 cut(s) 39
Asp700I GAANNNNTTC 1 cut(s) 788
AspLEI GCGC 1 cut(s) 583
AspS9I GGNCC 4 cut(s) 55, 488, 523, 854
AsuC2I CCSGG 3 cut(s) 22, 492, 520
AsuHPI GGTGA 6 cut(s) 206, 308, 362, 457, 508, 1315
AsuNHI GCTAGC 1 cut(s) 878
AvaII GGWCC 2 cut(s) 488, 523
BaeGI GKGCMC 2 cut(s) 574, 1251
BanI GGYRCC 2 cut(s) 846, 1246
BbrPI CACGTG 1 cut(s) 557
Bbv12I GWGCWC 2 cut(s) 121, 574
BbvI GCAGC 3 cut(s) 263, 678, 1368
BccI CCATC 2 cut(s) 541, 1131
BciT130I CCWGG 4 cut(s) 53, 294, 951, 1293
BciVI GTATCC 3 cut(s) 162, 1046, 1136
BcnI CCSGG 3 cut(s) 22, 492, 520
BcoDI GTCTC 4 cut(s) 138, 347, 809, 898
BcuI ACTAGT 2 cut(s) 644, 962
BfaI CTAG 8 cut(s) 11, 485, 645, 750, 840, 879, 963, 1074
BfmI CTRYAG 2 cut(s) 1382, 1404
BfuI GTATCC 3 cut(s) 162, 1046, 1136
BglI GCCNNNNNGGC 1 cut(s) 861
BisI GCNGC 6 cut(s) 252, 381, 552, 692, 1018, 1382
BlsI GCNGC 6 cut(s) 253, 382, 553, 693, 1019, 1383
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 7 cut(s) 22, 53, 294, 492, 520, 951, 1293
Bme18I GGWCC 2 cut(s) 488, 523
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 4 cut(s) 55, 488, 523, 854
BmiI GGNNCC 5 cut(s) 490, 524, 848, 856, 1248
BmrFI CCNGG 7 cut(s) 22, 53, 294, 492, 520, 951, 1293
BmrI ACTGGG 3 cut(s) 1014, 1029, 1345
BmsI GCATC 4 cut(s) 259, 433, 728, 1296
BmtI GCTAGC 1 cut(s) 882
BmuI ACTGGG 3 cut(s) 1014, 1029, 1345
BoxI GACNNNNGTC 1 cut(s) 431
BplI GAGNNNNNCTC 2 cut(s) 223, 255
BpmI CTGGAG 2 cut(s) 298, 972
Bpu10I CCTNAGC 1 cut(s) 825
BpuMI CCSGG 3 cut(s) 22, 492, 520
BsaAI YACGTR 1 cut(s) 557
BsaI GGTCTC 2 cut(s) 347, 809
BsaJI CCNNGG 5 cut(s) 21, 52, 519, 850, 986
BsaWI WCCGGW 2 cut(s) 39, 347
BsaXI ACNNNNNCTCC 2 cut(s) 296, 326
Bsc4I CCNNNNNNNGG 5 cut(s) 140, 321, 1040, 1165, 1256
Bse118I RCCGGY 1 cut(s) 39
Bse1I ACTGG 3 cut(s) 1009, 1035, 1340
Bse3DI GCAATG 1 cut(s) 1353
BseBI CCWGG 4 cut(s) 53, 294, 951, 1293
BseDI CCNNGG 5 cut(s) 21, 52, 519, 850, 986
BseGI GGATG 5 cut(s) 130, 1123, 1155, 1269, 1327
BseLI CCNNNNNNNGG 5 cut(s) 140, 321, 1040, 1165, 1256
BseMI GCAATG 1 cut(s) 1353
BseMII CTCAG 1 cut(s) 1220
BseNI ACTGG 3 cut(s) 1009, 1035, 1340
BseSI GKGCMC 2 cut(s) 574, 1251
BseXI GCAGC 3 cut(s) 263, 678, 1368
Bsh1236I CGCG 1 cut(s) 581
BshFI GGCC 3 cut(s) 57, 495, 855
BshNI GGYRCC 2 cut(s) 846, 1246
BshTI ACCGGT 1 cut(s) 39
BsiHKAI GWGCWC 2 cut(s) 121, 574
BsiSI CCGG 5 cut(s) 21, 40, 348, 492, 519
BslFI GGGAC 4 cut(s) 218, 337, 536, 749
BslI CCNNNNNNNGG 5 cut(s) 140, 321, 1040, 1165, 1256
BsmAI GTCTC 4 cut(s) 138, 347, 809, 898
BsmFI GGGAC 4 cut(s) 218, 337, 536, 749
BsnI GGCC 3 cut(s) 57, 495, 855
Bso31I GGTCTC 2 cut(s) 347, 809
Bsp1286I GDGCHC 3 cut(s) 121, 574, 1251
Bsp1407I TGTACA 1 cut(s) 1324
Bsp143I GATC 3 cut(s) 298, 836, 1219
BspACI CCGC 6 cut(s) 381, 551, 983, 1018, 1251, 1400
BspANI GGCC 3 cut(s) 57, 495, 855
BspCNI CTCAG 1 cut(s) 1221
BspFNI CGCG 1 cut(s) 581
BspLI GGNNCC 5 cut(s) 490, 524, 848, 856, 1248
BspMAI CTGCAG 2 cut(s) 1386, 1408
BspOI GCTAGC 1 cut(s) 882
BspPI GGATC 1 cut(s) 1214
BspT107I GGYRCC 2 cut(s) 846, 1246
BspTNI GGTCTC 2 cut(s) 347, 809
BsrBI CCGCTC 1 cut(s) 1020
BsrDI GCAATG 1 cut(s) 1353
BsrFI RCCGGY 1 cut(s) 39
BsrGI TGTACA 1 cut(s) 1324
BsrI ACTGG 3 cut(s) 1009, 1035, 1340
BssAI RCCGGY 1 cut(s) 39
BssECI CCNNGG 5 cut(s) 21, 52, 519, 850, 986
BssMI GATC 3 cut(s) 298, 836, 1219
BssT1I CCWWGG 1 cut(s) 850
Bst2UI CCWGG 4 cut(s) 53, 294, 951, 1293
Bst4CI ACNGT 7 cut(s) 49, 109, 287, 430, 667, 1108, 1240
Bst6I CTCTTC 1 cut(s) 794
BstAUI TGTACA 1 cut(s) 1324
BstBAI YACGTR 1 cut(s) 557
BstC8I GCNNGC 6 cut(s) 81, 696, 880, 1022, 1251, 1404
BstDEI CTNAG 4 cut(s) 98, 732, 825, 1229
BstDSI CCRYGG 1 cut(s) 986
BstENI CCTNNNNNAGG 1 cut(s) 1163
BstF5I GGATG 5 cut(s) 130, 1123, 1155, 1269, 1327
BstFNI CGCG 1 cut(s) 581
BstHHI GCGC 1 cut(s) 583
BstKTI GATC 3 cut(s) 301, 839, 1222
BstMAI GTCTC 4 cut(s) 138, 347, 809, 898
BstMBI GATC 3 cut(s) 298, 836, 1219
BstMWI GCNNNNNNNGC 5 cut(s) 557, 578, 691, 744, 861
BstNI CCWGG 4 cut(s) 53, 294, 951, 1293
BstNSI RCATGY 2 cut(s) 20, 919
BstPAI GACNNNNGTC 1 cut(s) 431
BstSCI CCNGG 7 cut(s) 20, 51, 292, 490, 518, 949, 1291
BstSFI CTRYAG 2 cut(s) 1382, 1404
BstSLI GKGCMC 2 cut(s) 574, 1251
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 3 cut(s) 263, 678, 1368
BstXI CCANNNNNNTGG 1 cut(s) 1299
BsuI GTATCC 3 cut(s) 162, 1046, 1136
BsuRI GGCC 3 cut(s) 57, 495, 855
BtgI CCRYGG 1 cut(s) 986
BtrI CACGTC 1 cut(s) 223
BtsCI GGATG 5 cut(s) 130, 1123, 1155, 1269, 1327
BtsI GCAGTG 2 cut(s) 714, 873
BtsIMutI CAGTG 5 cut(s) 574, 714, 873, 1002, 1236
Cac8I GCNNGC 6 cut(s) 81, 696, 880, 1022, 1251, 1404
CfoI GCGC 1 cut(s) 583
Cfr10I RCCGGY 1 cut(s) 39
Cfr13I GGNCC 4 cut(s) 55, 488, 523, 854
CseI GACGC 1 cut(s) 215
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 3 cut(s) 66, 1104, 1325
CspAI ACCGGT 1 cut(s) 39
CviAII CATG 5 cut(s) 17, 93, 883, 916, 1139
CviQI GTAC 3 cut(s) 66, 1104, 1325
DdeI CTNAG 4 cut(s) 98, 732, 825, 1229
DpnI GATC 3 cut(s) 300, 838, 1221
DpnII GATC 3 cut(s) 298, 836, 1219
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 1 cut(s) 794
EarI CTCTTC 1 cut(s) 794
EciI GGCGGA 1 cut(s) 1389
Eco130I CCWWGG 1 cut(s) 850
Eco31I GGTCTC 2 cut(s) 347, 809
Eco47I GGWCC 2 cut(s) 488, 523
Eco57I CTGAAG 1 cut(s) 724
Eco72I CACGTG 1 cut(s) 557
EcoNI CCTNNNNNAGG 1 cut(s) 1163
EcoO109I RGGNCCY 2 cut(s) 488, 854
EcoRII CCWGG 4 cut(s) 51, 292, 949, 1291
EcoT14I CCWWGG 1 cut(s) 850
EcoT22I ATGCAT 2 cut(s) 274, 1311
ErhI CCWWGG 1 cut(s) 850
FaeI CATG 5 cut(s) 20, 96, 886, 919, 1142
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FaqI GGGAC 4 cut(s) 218, 337, 536, 749
FatI CATG 5 cut(s) 16, 92, 882, 915, 1138
FauI CCCGC 2 cut(s) 990, 1258
Fnu4HI GCNGC 6 cut(s) 252, 381, 552, 692, 1018, 1382
FokI GGATG 5 cut(s) 117, 1110, 1142, 1256, 1334
Fsp4HI GCNGC 6 cut(s) 252, 381, 552, 692, 1018, 1382
FspBI CTAG 8 cut(s) 11, 485, 645, 750, 840, 879, 963, 1074
GlaI GCGC 1 cut(s) 582
GluI GCNGC 6 cut(s) 252, 381, 552, 692, 1018, 1382
GsuI CTGGAG 2 cut(s) 298, 972
HaeIII GGCC 3 cut(s) 57, 495, 855
HapII CCGG 5 cut(s) 21, 40, 348, 492, 519
HgaI GACGC 1 cut(s) 215
HhaI GCGC 1 cut(s) 583
Hin1II CATG 5 cut(s) 20, 96, 886, 919, 1142
Hin6I GCGC 1 cut(s) 581
HinP1I GCGC 1 cut(s) 581
HincII GTYRAC 1 cut(s) 290
HindII GTYRAC 1 cut(s) 290
HindIII AAGCTT 1 cut(s) 930
HinfI GANTC 3 cut(s) 146, 344, 810
HpaII CCGG 5 cut(s) 21, 40, 348, 492, 519
HphI GGTGA 6 cut(s) 206, 308, 362, 457, 508, 1315
Hpy166II GTNNAC 5 cut(s) 45, 290, 572, 958, 1363
Hpy188I TCNGA 6 cut(s) 258, 268, 743, 809, 1230, 1274
Hpy188III TCNNGA 7 cut(s) 229, 537, 614, 840, 1041, 1074, 1189
Hpy8I GTNNAC 5 cut(s) 45, 290, 572, 958, 1363
Hpy99I CGWCG 2 cut(s) 413, 782
HpyAV CCTTC 3 cut(s) 56, 736, 837
HpyCH4III ACNGT 7 cut(s) 49, 109, 287, 430, 667, 1108, 1240
HpyCH4IV ACGT 3 cut(s) 222, 556, 1185
HpyCH4V TGCA 9 cut(s) 272, 572, 636, 651, 719, 1163, 1309, 1384, 1406
HpyF10VI GCNNNNNNNGC 5 cut(s) 557, 578, 691, 744, 861
HpyF3I CTNAG 4 cut(s) 98, 732, 825, 1229
HpySE526I ACGT 3 cut(s) 222, 556, 1185
Hsp92II CATG 5 cut(s) 20, 96, 886, 919, 1142
HspAI GCGC 1 cut(s) 581
Kzo9I GATC 3 cut(s) 298, 836, 1219
LmnI GCTCC 5 cut(s) 116, 248, 259, 317, 1378
Lsp1109I GCAGC 3 cut(s) 263, 678, 1368
LweI GCATC 4 cut(s) 259, 433, 728, 1296
MabI ACCWGGT 1 cut(s) 292
MaeI CTAG 8 cut(s) 11, 485, 645, 750, 840, 879, 963, 1074
MaeII ACGT 3 cut(s) 222, 556, 1185
MaeIII GTNAC 4 cut(s) 29, 1089, 1108, 1313
MalI GATC 3 cut(s) 300, 838, 1221
MbiI CCGCTC 1 cut(s) 1020
MboI GATC 3 cut(s) 298, 836, 1219
MboII GAAGA 5 cut(s) 179, 394, 781, 784, 1127
MfeI CAATTG 1 cut(s) 307
MhlI GDGCHC 3 cut(s) 121, 574, 1251
MluCI AATT 5 cut(s) 307, 669, 921, 992, 1128
MlyI GAGTC 3 cut(s) 140, 338, 804
MnlI CCTC 9 cut(s) 395, 405, 457, 797, 1159, 1224, 1236, 1407, 1425
Mph1103I ATGCAT 2 cut(s) 274, 1311
MroXI GAANNNNTTC 1 cut(s) 788
MseI TTAA 5 cut(s) 282, 512, 672, 1209, 1423
MslI CAYNNNNRTG 2 cut(s) 1137, 1320
MspI CCGG 5 cut(s) 21, 40, 348, 492, 519
MspR9I CCNGG 7 cut(s) 22, 53, 294, 492, 520, 951, 1293
MunI CAATTG 1 cut(s) 307
MvaI CCWGG 4 cut(s) 53, 294, 951, 1293
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 5 cut(s) 557, 578, 691, 744, 861
NciI CCSGG 3 cut(s) 22, 492, 520
NdeII GATC 3 cut(s) 298, 836, 1219
NheI GCTAGC 1 cut(s) 878
NlaIII CATG 5 cut(s) 20, 96, 886, 919, 1142
NlaIV GGNNCC 5 cut(s) 490, 524, 848, 856, 1248
NmuCI GTSAC 2 cut(s) 1108, 1313
NsiI ATGCAT 2 cut(s) 274, 1311
NspI RCATGY 2 cut(s) 20, 919
PciI ACATGT 1 cut(s) 915
PdmI GAANNNNTTC 1 cut(s) 788
PflFI GACNNNGTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 949
PinAI ACCGGT 1 cut(s) 39
PkrI GCNGC 6 cut(s) 253, 382, 553, 693, 1019, 1383
PleI GAGTC 3 cut(s) 140, 338, 804
PmaCI CACGTG 1 cut(s) 557
PmlI CACGTG 1 cut(s) 557
PpsI GAGTC 3 cut(s) 140, 338, 804
Ppu21I YACGTR 1 cut(s) 557
PpuMI RGGWCCY 1 cut(s) 488
PscI ACATGT 1 cut(s) 915
PshAI GACNNNNGTC 1 cut(s) 431
Psp5II RGGWCCY 1 cut(s) 488
Psp6I CCWGG 4 cut(s) 51, 292, 949, 1291
PspCI CACGTG 1 cut(s) 557
PspGI CCWGG 4 cut(s) 51, 292, 949, 1291
PspN4I GGNNCC 5 cut(s) 490, 524, 848, 856, 1248
PspPI GGNCC 4 cut(s) 55, 488, 523, 854
PspPPI RGGWCCY 1 cut(s) 488
PstI CTGCAG 2 cut(s) 1386, 1408
PsyI GACNNNGTC 1 cut(s) 224
RsaI GTAC 3 cut(s) 67, 1105, 1326
RsaNI GTAC 3 cut(s) 66, 1104, 1325
RseI CAYNNNNRTG 2 cut(s) 1137, 1320
SaqAI TTAA 5 cut(s) 282, 512, 672, 1209, 1423
SatI GCNGC 6 cut(s) 252, 381, 552, 692, 1018, 1382
Sau3AI GATC 3 cut(s) 298, 836, 1219
Sau96I GGNCC 4 cut(s) 55, 488, 523, 854
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 3 cut(s) 140, 338, 804
ScrFI CCNGG 7 cut(s) 22, 53, 294, 492, 520, 951, 1293
SduI GDGCHC 3 cut(s) 121, 574, 1251
SexAI ACCWGGT 1 cut(s) 292
SfaNI GCATC 4 cut(s) 259, 433, 728, 1296
SfcI CTRYAG 2 cut(s) 1382, 1404
SinI GGWCC 2 cut(s) 488, 523
SmiMI CAYNNNNRTG 2 cut(s) 1137, 1320
SpeI ACTAGT 2 cut(s) 644, 962
Sse9I AATT 5 cut(s) 307, 669, 921, 992, 1128
SsiI CCGC 6 cut(s) 381, 551, 983, 1018, 1251, 1400
SspMI CTAG 8 cut(s) 11, 485, 645, 750, 840, 879, 963, 1074
StyD4I CCNGG 7 cut(s) 20, 51, 292, 490, 518, 949, 1291
StyI CCWWGG 1 cut(s) 850
TaaI ACNGT 7 cut(s) 49, 109, 287, 430, 667, 1108, 1240
TaiI ACGT 3 cut(s) 225, 559, 1188
TaqI TCGA 4 cut(s) 538, 759, 777, 835
TaqII GACCGA 1 cut(s) 791
TasI AATT 5 cut(s) 307, 669, 921, 992, 1128
TatI WGTACW 2 cut(s) 1103, 1324
TauI GCSGC 3 cut(s) 383, 554, 1020
Tru1I TTAA 5 cut(s) 282, 512, 672, 1209, 1423
Tru9I TTAA 5 cut(s) 282, 512, 672, 1209, 1423
TscAI CASTG 5 cut(s) 574, 721, 880, 1009, 1243
TseFI GTSAC 2 cut(s) 1108, 1313
TseI GCWGC 3 cut(s) 251, 691, 1381
Tsp45I GTSAC 2 cut(s) 1108, 1313
TspDTI ATGAA 4 cut(s) 119, 899, 1121, 1127
TspGWI ACGGA 4 cut(s) 397, 616, 620, 1003
TspRI CASTG 5 cut(s) 574, 721, 880, 1009, 1243
Tth111I GACNNNGTC 1 cut(s) 224
VneI GTGCAC 1 cut(s) 570
VpaK11BI GGWCC 2 cut(s) 488, 523
XagI CCTNNNNNAGG 1 cut(s) 1163
XapI RAATTY 1 cut(s) 992
XbaI TCTAGA 2 cut(s) 839, 1073
XceI RCATGY 2 cut(s) 20, 919
XcmI CCANNNNNNNNNTGG 1 cut(s) 857
XmnI GAANNNNTTC 1 cut(s) 788
XspI CTAG 8 cut(s) 11, 485, 645, 750, 840, 879, 963, 1074
ZrmI AGTACT 1 cut(s) 1105
Zsp2I ATGCAT 2 cut(s) 274, 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.