FvH4_7g07800

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001265
Physical Location & Seq
Forward (+)
7696581 .. 7699286
2706 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07800.t1

Sequence Viewer

Length: 1725 bp
ATGGAGGCACCTAGTAGCATTCTCCTCCTAGGCCTTTGCCTCCTCTTTGCTTCTTCAGCAATGTCGACCTTGGCCGAACCCAAAGCTCACCACCATGAATTTGTTATCCAAGCAACACCAGCGAAAAGGCTGTGCAAAACCCACAACAGCATCACAGTGAATGGACAGTTCCCTGGACCAACCTTGGAAGTAAACAATGGCGACACTCTTGTCGTCAAAGTCACAAACAAAGCTCGATACAACGTCACCATTCACTGGCATGGCATTCGGCAAATGAGAACTGGATGGGCGGATGGTCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGGAGCTACACCTACCGGTTTACAGTGCAGGGCCAAGAAGGCACTCTGTGGTGGCACGCACACAGCTCATGGCTTAGAGCCACCGTGTATGGAGCTCTTATTATTCATCCCAAACAAGGAGACTCATATCCATTCCCTAAACCAAATCGTCAAGAAACCCTTCTTCTCGGTGAGTGGTGGGACGCTAACCCTATTGACGTGGTCAGGCAGGCAACTCGCACCGGAGCAGCTCCCAATATTTCCGACGCATACACCATCAATGGCCAACCTGGTGATCTTTACAATTGCTCCAAGAAAGGAACTGTCGTAGTTCCCATAGACTCCGGTGAGACCAACCTTTTGAGAGTGGTAAATGCCGCCCTCAACCAACCTCTTTTCTTTTCCGTCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCTTCCTACACCAAGCCTTTCACCACCAAAGTTCTCATGCTTGGACCTGGCCAGACCACCGATGTTTTAATCTCTGGAGACCAGCAGCCATCTCTATACTACATGGCAGCGCATGCTTATTTCAGTGCACAAAACGCTCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTCCGTTGCAATAACACTACTAGCTGCAAAAAGAGTAAACCCATAATGCCACAGCTGCCAGCTTTCAATGACACAAACACTGCAGATGTCTTCACTAGGAGCTTCAGAAGCCCTAGAAAAGTTGAGGTCCCTACAGAAATCGACGAGAACCTCTTCTTCACAATAGGACTTGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGATGCCAAGGCCCCAATGGCACACGCTTCTCTGCTAGCATGAACAATGTCTCATTTGTACTGCCAAACAACATGTCAATTCTTCAAGCTTACCAGCAAAACATTCCTGGAGTTTATACTAGTGATTTTCCAGCCAACCCGCCAAAGAAATTCGATTACACTGGGAATATCAGCCGCTCCCTTTGGCAGCCCAGTTTTGGAACAAAGGGATACAAGTTGAGGTATGGGTCTAAAGTGCAGGTGGTGTTACAAGACACAAGTATTGTCACACCCGAGAACCATCCAGTTCATCTCCACGGATACGATTTCTACATTCTTGCTCAGGGTTTTGGAAACTTCAATGCCAAGACTGATACTAAGAAGTTTAACCTTGTTGATCCACCTCTGAGGAACACTGTGTCGGTGCCTGCAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGTTGATGCACTGTCACTTGGATGTTCATATCAACTGGGGTTTGGGCATGGTTTTCTTGGTGGACAATGGAGTTGGGCAGCTGCAAACAATAGAGCCTCCTCCTGCAGATTTGCCTCGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

575

Amino Acids

63.57

Weight (kDa)

9.05

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 37 - 150 3.2e-45 Multicopper oxidase
Cu-oxidase PF00394 164 - 311 2.3e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 423 - 556 2.1e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1372
AasI GACNNNNNNGTC 1 cut(s) 209
Acc36I ACCTGC 1 cut(s) 1372
AccB1I GGYRCC 2 cut(s) 7, 1546
AccB7I CCANNNNNTGG 1 cut(s) 255
AccBSI CCGCTC 1 cut(s) 1320
AccI GTMKAC 1 cut(s) 65
AciI CCGC 4 cut(s) 290, 690, 1283, 1318
AclWI GGATC 1 cut(s) 1514
AcoI YGGCCR 3 cut(s) 72, 595, 802
AcsI RAATTY 2 cut(s) 98, 1292
AcuI CTGAAG 2 cut(s) 39, 1024
AdeI CACNNNGTG 1 cut(s) 381
AfaI GTAC 1 cut(s) 1203
AfiI CCNNNNNNNGG 4 cut(s) 255, 449, 1340, 1556
AflIII ACRYGT 1 cut(s) 1215
AgeI ACCGGT 1 cut(s) 348
AgsI TTSAA 4 cut(s) 926, 1003, 1229, 1483
AhlI ACTAGT 1 cut(s) 1262
AjiI CACGTC 1 cut(s) 532
AjnI CCWGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
Alw21I GWGCWC 2 cut(s) 430, 883
Alw26I GTCTC 4 cut(s) 447, 656, 825, 1198
Alw44I GTGCAC 1 cut(s) 879
AlwI GGATC 1 cut(s) 1514
Ama87I CYCGRG 2 cut(s) 299, 1415
AoxI GGCC 6 cut(s) 31, 72, 364, 595, 802, 1153
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 8 cut(s) 560, 838, 860, 960, 991, 1330, 1678, 1681
ApoI RAATTY 2 cut(s) 98, 1292
ArsI GACNNNNNNTTYG 4 cut(s) 655, 687, 1202, 1234
AsiGI ACCGGT 1 cut(s) 348
Asp700I GAANNNNTTC 2 cut(s) 492, 1088
AspA2I CCTAGG 1 cut(s) 28
AspLEI GCGC 1 cut(s) 865
AspS9I GGNCC 6 cut(s) 176, 296, 364, 797, 1063, 1154
AsuHPI GGTGA 6 cut(s) 80, 238, 515, 617, 671, 766
AsuNHI GCTAGC 1 cut(s) 1178
AvaI CYCGRG 2 cut(s) 299, 1415
AvaII GGWCC 4 cut(s) 176, 296, 797, 1063
AvrII CCTAGG 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 883
BalI TGGCCA 2 cut(s) 597, 804
BanI GGYRCC 2 cut(s) 7, 1546
BanII GRGCYC 1 cut(s) 430
BbsI GAAGAC 1 cut(s) 1018
Bbv12I GWGCWC 2 cut(s) 430, 883
BbvI GCAGC 8 cut(s) 572, 850, 872, 947, 978, 1342, 1668, 1690
BccI CCATC 5 cut(s) 279, 287, 596, 850, 1431
BcgI CGANNNNNNTGC 4 cut(s) 248, 282, 530, 564
BciT130I CCWGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
BciVI GTATCC 2 cut(s) 1346, 1436
BcoDI GTCTC 4 cut(s) 447, 656, 825, 1198
BcuI ACTAGT 1 cut(s) 1262
BfaI CTAG 8 cut(s) 12, 29, 957, 1032, 1050, 1140, 1179, 1263
BfmI CTRYAG 3 cut(s) 1017, 1068, 1704
BfuAI ACCTGC 1 cut(s) 1372
BfuI GTATCC 2 cut(s) 1346, 1436
BglI GCCNNNNNGGC 2 cut(s) 372, 1161
BlnI CCTAGG 1 cut(s) 28
Bme1390I CCNGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
Bme18I GGWCC 4 cut(s) 176, 296, 797, 1063
BmeT110I CYCGRG 2 cut(s) 299, 1415
BmgBI CACGTC 1 cut(s) 532
BmgT120I GGNCC 6 cut(s) 176, 296, 364, 797, 1063, 1154
BmiI GGNNCC 5 cut(s) 9, 298, 1065, 1156, 1548
BmrFI CCNGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
BmrI ACTGGG 3 cut(s) 1314, 1329, 1645
BmsI GCATC 4 cut(s) 159, 742, 1136, 1596
BmtI GCTAGC 1 cut(s) 1182
BmuI ACTGGG 3 cut(s) 1314, 1329, 1645
BpiI GAAGAC 1 cut(s) 1018
BpmI CTGGAG 2 cut(s) 849, 1272
Bpu10I CCTNAGC 2 cut(s) 1125, 1464
BsaI GGTCTC 2 cut(s) 656, 825
BsaJI CCNNGG 7 cut(s) 28, 69, 172, 183, 1150, 1438, 1715
BsaWI WCCGGW 3 cut(s) 348, 554, 656
BsaXI ACNNNNNCTCC 2 cut(s) 605, 635
Bsc4I CCNNNNNNNGG 4 cut(s) 255, 449, 1340, 1556
Bse118I RCCGGY 1 cut(s) 348
Bse1I ACTGG 6 cut(s) 260, 286, 1309, 1335, 1427, 1640
Bse3DI GCAATG 1 cut(s) 66
BseBI CCWGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
BseDI CCNNGG 7 cut(s) 28, 69, 172, 183, 1150, 1438, 1715
BseGI GGATG 5 cut(s) 290, 298, 439, 1423, 1627
BseLI CCNNNNNNNGG 4 cut(s) 255, 449, 1340, 1556
BseMI GCAATG 1 cut(s) 66
BseMII CTCAG 2 cut(s) 1478, 1520
BseNI ACTGG 6 cut(s) 260, 286, 1309, 1335, 1427, 1640
BseRI GAGGAG 3 cut(s) 14, 32, 1689
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 8 cut(s) 572, 850, 872, 947, 978, 1342, 1668, 1690
BsgI GTGCAG 2 cut(s) 380, 1400
BshFI GGCC 6 cut(s) 33, 74, 366, 597, 804, 1155
BshNI GGYRCC 2 cut(s) 7, 1546
BshTI ACCGGT 1 cut(s) 348
BsiHKAI GWGCWC 2 cut(s) 430, 883
BsiHKCI CYCGRG 2 cut(s) 299, 1415
BsiSI CCGG 3 cut(s) 349, 555, 657
BslFI GGGAC 3 cut(s) 282, 527, 1049
BslI CCNNNNNNNGG 4 cut(s) 255, 449, 1340, 1556
BsmAI GTCTC 4 cut(s) 447, 656, 825, 1198
BsmFI GGGAC 3 cut(s) 282, 527, 1049
BsmI GAATGC 2 cut(s) 18, 264
BsnI GGCC 6 cut(s) 33, 74, 366, 597, 804, 1155
Bso31I GGTCTC 2 cut(s) 656, 825
BsoBI CYCGRG 2 cut(s) 299, 1415
Bsp1286I GDGCHC 2 cut(s) 430, 883
Bsp143I GATC 3 cut(s) 607, 1136, 1519
BspACI CCGC 4 cut(s) 290, 690, 1283, 1318
BspANI GGCC 6 cut(s) 33, 74, 366, 597, 804, 1155
BspCNI CTCAG 2 cut(s) 1477, 1521
BspLI GGNNCC 5 cut(s) 9, 298, 1065, 1156, 1548
BspMAI CTGCAG 2 cut(s) 1021, 1708
BspMI ACCTGC 1 cut(s) 1372
BspOI GCTAGC 1 cut(s) 1182
BspPI GGATC 1 cut(s) 1514
BspT107I GGYRCC 2 cut(s) 7, 1546
BspTNI GGTCTC 2 cut(s) 656, 825
BsrBI CCGCTC 1 cut(s) 1320
BsrDI GCAATG 1 cut(s) 66
BsrFI RCCGGY 1 cut(s) 348
BsrI ACTGG 6 cut(s) 260, 286, 1309, 1335, 1427, 1640
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 7 cut(s) 28, 69, 172, 183, 1150, 1438, 1715
BssMI GATC 3 cut(s) 607, 1136, 1519
BssT1I CCWWGG 4 cut(s) 28, 69, 183, 1150
Bst2UI CCWGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
Bst4CI ACNGT 8 cut(s) 157, 168, 358, 418, 637, 739, 1540, 1613
Bst6I CTCTTC 1 cut(s) 1094
BstAPI GCANNNNNTGC 1 cut(s) 866
BstC8I GCNNGC 6 cut(s) 390, 543, 867, 996, 1180, 1551
BstDEI CTNAG 5 cut(s) 407, 1125, 1464, 1500, 1529
BstDSI CCRYGG 1 cut(s) 1438
BstF5I GGATG 5 cut(s) 290, 298, 439, 1423, 1627
BstHHI GCGC 1 cut(s) 865
BstKTI GATC 3 cut(s) 610, 1139, 1522
BstMAI GTCTC 4 cut(s) 447, 656, 825, 1198
BstMBI GATC 3 cut(s) 607, 1136, 1519
BstMWI GCNNNNNNNGC 8 cut(s) 56, 119, 372, 866, 887, 991, 1044, 1161
BstNI CCWGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
BstNSI RCATGY 2 cut(s) 869, 1219
BstSCI CCNGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
BstSFI CTRYAG 3 cut(s) 1017, 1068, 1704
BstSLI GKGCMC 1 cut(s) 883
BstV1I GCAGC 8 cut(s) 572, 850, 872, 947, 978, 1342, 1668, 1690
BstV2I GAAGAC 1 cut(s) 1018
BstXI CCANNNNNNTGG 1 cut(s) 1599
BsuI GTATCC 2 cut(s) 1346, 1436
BsuRI GGCC 6 cut(s) 33, 74, 366, 597, 804, 1155
BtgI CCRYGG 1 cut(s) 1438
BtrI CACGTC 1 cut(s) 532
BtsCI GGATG 5 cut(s) 290, 298, 439, 1423, 1627
BtsI GCAGTG 1 cut(s) 1014
BtsIMutI CAGTG 8 cut(s) 162, 253, 363, 883, 1014, 1302, 1536, 1609
BveI ACCTGC 1 cut(s) 1372
Cac8I GCNNGC 6 cut(s) 390, 543, 867, 996, 1180, 1551
CfoI GCGC 1 cut(s) 865
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 6 cut(s) 176, 296, 364, 797, 1063, 1154
CseI GACGC 2 cut(s) 524, 587
CsiI ACCWGGT 1 cut(s) 601
Csp6I GTAC 1 cut(s) 1202
CspAI ACCGGT 1 cut(s) 348
CviAII CATG 9 cut(s) 95, 260, 402, 790, 856, 866, 1183, 1216, 1648
CviQI GTAC 1 cut(s) 1202
DdeI CTNAG 5 cut(s) 407, 1125, 1464, 1500, 1529
DpnI GATC 3 cut(s) 609, 1138, 1521
DpnII GATC 3 cut(s) 607, 1136, 1519
DraIII CACNNNGTG 1 cut(s) 381
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 3 cut(s) 72, 595, 802
Eam1104I CTCTTC 1 cut(s) 1094
EarI CTCTTC 1 cut(s) 1094
EciI GGCGGA 1 cut(s) 305
Ecl136II GAGCTC 1 cut(s) 428
Eco130I CCWWGG 4 cut(s) 28, 69, 183, 1150
Eco147I AGGCCT 1 cut(s) 33
Eco24I GRGCYC 1 cut(s) 430
Eco31I GGTCTC 2 cut(s) 656, 825
Eco47I GGWCC 4 cut(s) 176, 296, 797, 1063
Eco53kI GAGCTC 1 cut(s) 428
Eco57I CTGAAG 2 cut(s) 39, 1024
Eco88I CYCGRG 2 cut(s) 299, 1415
EcoICRI GAGCTC 1 cut(s) 428
EcoO109I RGGNCCY 2 cut(s) 1063, 1154
EcoRII CCWGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
EcoT14I CCWWGG 4 cut(s) 28, 69, 183, 1150
EcoT38I GRGCYC 1 cut(s) 430
ErhI CCWWGG 4 cut(s) 28, 69, 183, 1150
FaeI CATG 9 cut(s) 98, 263, 405, 793, 859, 869, 1186, 1219, 1651
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 3 cut(s) 282, 527, 1049
FatI CATG 9 cut(s) 94, 259, 401, 789, 855, 865, 1182, 1215, 1647
FauI CCCGC 1 cut(s) 1290
FblI GTMKAC 1 cut(s) 65
FokI GGATG 5 cut(s) 297, 305, 426, 1410, 1634
FriOI GRGCYC 1 cut(s) 430
FspBI CTAG 8 cut(s) 12, 29, 957, 1032, 1050, 1140, 1179, 1263
GlaI GCGC 1 cut(s) 864
GsuI CTGGAG 2 cut(s) 849, 1272
HaeIII GGCC 6 cut(s) 33, 74, 366, 597, 804, 1155
HapII CCGG 3 cut(s) 349, 555, 657
HgaI GACGC 2 cut(s) 524, 587
HhaI GCGC 1 cut(s) 865
Hin1II CATG 9 cut(s) 98, 263, 405, 793, 859, 869, 1186, 1219, 1651
Hin6I GCGC 1 cut(s) 863
HinP1I GCGC 1 cut(s) 863
HincII GTYRAC 1 cut(s) 66
HindII GTYRAC 1 cut(s) 66
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 3 cut(s) 455, 653, 1110
HpaII CCGG 3 cut(s) 349, 555, 657
HphI GGTGA 6 cut(s) 80, 238, 515, 617, 671, 766
Hpy166II GTNNAC 6 cut(s) 66, 193, 354, 881, 974, 1663
Hpy188I TCNGA 4 cut(s) 577, 1043, 1530, 1574
Hpy188III TCNNGA 5 cut(s) 299, 485, 828, 923, 1140
Hpy8I GTNNAC 6 cut(s) 66, 193, 354, 881, 974, 1663
Hpy99I CGWCG 3 cut(s) 581, 722, 1082
HpyAV CCTTC 2 cut(s) 365, 503
HpyCH4III ACNGT 8 cut(s) 157, 168, 358, 418, 637, 739, 1540, 1613
HpyCH4IV ACGT 2 cut(s) 243, 531
HpyF10VI GCNNNNNNNGC 8 cut(s) 56, 119, 372, 866, 887, 991, 1044, 1161
HpyF3I CTNAG 5 cut(s) 407, 1125, 1464, 1500, 1529
HpySE526I ACGT 2 cut(s) 243, 531
Hsp92II CATG 9 cut(s) 98, 263, 405, 793, 859, 869, 1186, 1219, 1651
HspAI GCGC 1 cut(s) 863
Kzo9I GATC 3 cut(s) 607, 1136, 1519
LmnI GCTCC 8 cut(s) 336, 425, 557, 568, 626, 895, 1035, 1325
Lsp1109I GCAGC 8 cut(s) 572, 850, 872, 947, 978, 1342, 1668, 1690
LweI GCATC 4 cut(s) 159, 742, 1136, 1596
MabI ACCWGGT 1 cut(s) 601
MaeI CTAG 8 cut(s) 12, 29, 957, 1032, 1050, 1140, 1179, 1263
MaeII ACGT 2 cut(s) 243, 531
MaeIII GTNAC 6 cut(s) 220, 244, 307, 1389, 1408, 1613
MalI GATC 3 cut(s) 609, 1138, 1521
MbiI CCGCTC 1 cut(s) 1320
MboI GATC 3 cut(s) 607, 1136, 1519
MboII GAAGA 7 cut(s) 45, 488, 1018, 1081, 1084, 1155, 1217
MfeI CAATTG 1 cut(s) 616
MhlI GDGCHC 2 cut(s) 430, 883
MlsI TGGCCA 2 cut(s) 597, 804
MluCI AATT 4 cut(s) 98, 616, 1221, 1292
MluNI TGGCCA 2 cut(s) 597, 804
MlyI GAGTC 3 cut(s) 449, 647, 1104
MmeI TCCRAC 1 cut(s) 600
Mox20I TGGCCA 2 cut(s) 597, 804
MroXI GAANNNNTTC 2 cut(s) 492, 1088
MscI TGGCCA 2 cut(s) 597, 804
MseI TTAA 2 cut(s) 821, 1509
MslI CAYNNNNRTG 4 cut(s) 93, 155, 258, 1620
Msp20I TGGCCA 2 cut(s) 597, 804
MspA1I CMGCKG 2 cut(s) 991, 1681
MspI CCGG 3 cut(s) 349, 555, 657
MspR9I CCNGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
MunI CAATTG 1 cut(s) 616
Mva1269I GAATGC 2 cut(s) 18, 264
MvaI CCWGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
MwoI GCNNNNNNNGC 8 cut(s) 56, 119, 372, 866, 887, 991, 1044, 1161
NdeII GATC 3 cut(s) 607, 1136, 1519
NheI GCTAGC 1 cut(s) 1178
NlaIII CATG 9 cut(s) 98, 263, 405, 793, 859, 869, 1186, 1219, 1651
NlaIV GGNNCC 5 cut(s) 9, 298, 1065, 1156, 1548
NmuCI GTSAC 4 cut(s) 220, 244, 1408, 1613
NspI RCATGY 2 cut(s) 869, 1219
PaeI GCATGC 1 cut(s) 869
PaqCI CACCTGC 1 cut(s) 1372
PceI AGGCCT 1 cut(s) 33
PciI ACATGT 1 cut(s) 1215
PctI GAATGC 2 cut(s) 18, 264
PdmI GAANNNNTTC 2 cut(s) 492, 1088
PflFI GACNNNGTC 1 cut(s) 533
PflMI CCANNNNNTGG 1 cut(s) 255
PfoI TCCNGGA 1 cut(s) 1249
PinAI ACCGGT 1 cut(s) 348
PleI GAGTC 3 cut(s) 449, 647, 1104
PpsI GAGTC 3 cut(s) 449, 647, 1104
PpuMI RGGWCCY 1 cut(s) 1063
PscI ACATGT 1 cut(s) 1215
Psp124BI GAGCTC 1 cut(s) 430
Psp5II RGGWCCY 1 cut(s) 1063
Psp6I CCWGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
PspGI CCWGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
PspN4I GGNNCC 5 cut(s) 9, 298, 1065, 1156, 1548
PspPI GGNCC 6 cut(s) 176, 296, 364, 797, 1063, 1154
PspPPI RGGWCCY 1 cut(s) 1063
PstI CTGCAG 2 cut(s) 1021, 1708
PsyI GACNNNGTC 1 cut(s) 533
PvuII CAGCTG 2 cut(s) 991, 1681
RsaI GTAC 1 cut(s) 1203
RsaNI GTAC 1 cut(s) 1202
RseI CAYNNNNRTG 4 cut(s) 93, 155, 258, 1620
SacI GAGCTC 1 cut(s) 430
SalI GTCGAC 1 cut(s) 64
SaqAI TTAA 2 cut(s) 821, 1509
Sau3AI GATC 3 cut(s) 607, 1136, 1519
Sau96I GGNCC 6 cut(s) 176, 296, 364, 797, 1063, 1154
SchI GAGTC 3 cut(s) 449, 647, 1104
ScrFI CCNGG 6 cut(s) 174, 330, 603, 801, 1251, 1593
SduI GDGCHC 2 cut(s) 430, 883
SexAI ACCWGGT 1 cut(s) 601
SfaNI GCATC 4 cut(s) 159, 742, 1136, 1596
SfcI CTRYAG 3 cut(s) 1017, 1068, 1704
SinI GGWCC 4 cut(s) 176, 296, 797, 1063
SmiMI CAYNNNNRTG 4 cut(s) 93, 155, 258, 1620
SpeI ACTAGT 1 cut(s) 1262
SphI GCATGC 1 cut(s) 869
Sse9I AATT 4 cut(s) 98, 616, 1221, 1292
SseBI AGGCCT 1 cut(s) 33
SsiI CCGC 4 cut(s) 290, 690, 1283, 1318
SspI AATATT 1 cut(s) 571
SspMI CTAG 8 cut(s) 12, 29, 957, 1032, 1050, 1140, 1179, 1263
SstI GAGCTC 1 cut(s) 430
StuI AGGCCT 1 cut(s) 33
StyD4I CCNGG 6 cut(s) 172, 328, 601, 799, 1249, 1591
StyI CCWWGG 4 cut(s) 28, 69, 183, 1150
TaaI ACNGT 8 cut(s) 157, 168, 358, 418, 637, 739, 1540, 1613
TaiI ACGT 2 cut(s) 246, 534
TaqI TCGA 5 cut(s) 65, 235, 1077, 1135, 1296
TasI AATT 4 cut(s) 98, 616, 1221, 1292
TatI WGTACW 1 cut(s) 1201
TauI GCSGC 2 cut(s) 692, 1320
Tru1I TTAA 2 cut(s) 821, 1509
Tru9I TTAA 2 cut(s) 821, 1509
TscAI CASTG 8 cut(s) 162, 260, 363, 883, 1021, 1309, 1543, 1616
TseFI GTSAC 4 cut(s) 220, 244, 1408, 1613
TseI GCWGC 8 cut(s) 560, 838, 860, 960, 991, 1330, 1678, 1681
Tsp45I GTSAC 4 cut(s) 220, 244, 1408, 1613
TspDTI ATGAA 5 cut(s) 111, 428, 1199, 1421, 1616
TspGWI ACGGA 4 cut(s) 706, 925, 929, 1455
TspRI CASTG 8 cut(s) 162, 260, 363, 883, 1021, 1309, 1543, 1616
Tth111I GACNNNGTC 1 cut(s) 533
Van91I CCANNNNNTGG 1 cut(s) 255
VneI GTGCAC 1 cut(s) 879
VpaK11BI GGWCC 4 cut(s) 176, 296, 797, 1063
XapI RAATTY 2 cut(s) 98, 1292
XbaI TCTAGA 1 cut(s) 1139
XceI RCATGY 2 cut(s) 869, 1219
XcmI CCANNNNNNNNNTGG 1 cut(s) 1157
XmaJI CCTAGG 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 2 cut(s) 492, 1088
XspI CTAG 8 cut(s) 12, 29, 957, 1032, 1050, 1140, 1179, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.