Rroxscaffold_4G00312770

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001265
Physical Location & Seq
Reverse (-)
35954316 .. 35956842
2527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00312770.1

Sequence Viewer

Length: 1386 bp
ATGAATTTGTTGCACGGCATTCGGCAAATGAGAACTGGATGGGCGGATGGGCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGGAGTTACACCTACCGGTTTACAATCCAAGGTCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCGAAACAAGGAGACTCGTATCCATTCACTAAACCGAATCGTCAAGCAACACTTCTTCTTGGTGAGTGGTGGGATGGTAACCCTATTGACGTGGTGAGGAGGGCAACTCGGACAGGAGCAGCTCCAAATGTTTCTAACGCATATACTATCAACGGTCAACCCGGAGATCTTTACAGTTGCTCCAGCAAAGGCACTGTCATAGTTCCAATAGACTCTGGTGAGACCAACCTACTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAATCACAAACTGACTGTGGTTGGTGCTGATGCCTCGTACACCAAGCCTTTCACCACCAATGTTCTCATGCTAGGCCCGGGCCAGACTACTGATGTTTTAATCACCGGGGACCAGCCACCATCTAGATACTACTTGGCGGCGAGTGCGTATTTCAGTGCACAAAATGCTCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTCCGTTGCAACACTACCAGTTGCAAAAAGGGTAAAACAGTAATTAAACCCATAATGCCAAACCTGCCAGCTTTCAATGACACAAACACAGCATCTGCTTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGTCTCGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGATGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAATATTCCTGGAGTTTTCACTAGTGATTTTCCTGCCAACCCACCACGGAAATTTGATTACACTGGGAATGTCAGCCGCTCGCTTTTTGGCAACCGAGTTCTGGAACAAAGGGATACAAAGGGCTTTGGAAATTTCAACCCCAAGACTGATACTAAAAAGTTCAACCTTGTTGATCCACCTCTAAGGAACACGGTCGCGGTGCCCGCAAATGGTTGGGCAGTCATCAGATTTGTTGCTGACAATCCAGGTGCTTGGATTATGCATTGTCACTTGGATGTTCATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGTTGCAATCAATAGAGCCACTGCCGGCAGATTATCCTCTGTGTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

461

Amino Acids

50.92

Weight (kDa)

9.24

Isoelectric Point (pI)

34.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 4 - 68 2.2e-23 Multicopper oxidase
Cu-oxidase PF00394 81 - 229 1.1e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 376 - 442 1.9e-24 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 762
AccB1I GGYRCC 1 cut(s) 1204
AccBSI CCGCTC 1 cut(s) 1083
AccII CGCG 1 cut(s) 1202
AciI CCGC 6 cut(s) 44, 444, 614, 1081, 1202, 1209
AclWI GGATC 1 cut(s) 1172
AcoI YGGCCR 1 cut(s) 1302
AcsI RAATTY 3 cut(s) 4, 1055, 1135
AcuI CTGAAG 1 cut(s) 787
AfaI GTAC 2 cut(s) 130, 515
AfiI CCNNNNNNNGG 3 cut(s) 203, 1105, 1214
AflIII ACRYGT 1 cut(s) 978
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 4 cut(s) 680, 766, 1141, 1168
AhlI ACTAGT 1 cut(s) 1025
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 3 cut(s) 82, 1012, 1249
AluBI AGCT 5 cut(s) 153, 317, 761, 801, 995
AluI AGCT 5 cut(s) 153, 317, 761, 801, 995
Alw21I GWGCWC 2 cut(s) 184, 637
Alw26I GTCTC 4 cut(s) 201, 410, 872, 961
Alw44I GTGCAC 1 cut(s) 633
AlwI GGATC 1 cut(s) 1172
AlwNI CAGNNNCTG 1 cut(s) 785
Ama87I CYCGRG 2 cut(s) 53, 553
AoxI GGCC 5 cut(s) 50, 550, 556, 916, 1302
ApaI GGGCCC 1 cut(s) 54
ApaLI GTGCAC 1 cut(s) 633
ApeKI GCWGC 1 cut(s) 314
ApoI RAATTY 3 cut(s) 4, 1055, 1135
ArsI GACNNNNNNTTYG 4 cut(s) 375, 407, 965, 997
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 851
AspS9I GGNCC 6 cut(s) 50, 51, 551, 556, 586, 917
AsuC2I CCSGG 4 cut(s) 357, 554, 555, 583
AsuHPI GGTGA 5 cut(s) 269, 301, 425, 520, 571
AsuNHI GCTAGC 1 cut(s) 941
AvaI CYCGRG 2 cut(s) 53, 553
AvaII GGWCC 1 cut(s) 586
BaeGI GKGCMC 3 cut(s) 54, 637, 1209
BalI TGGCCA 1 cut(s) 1304
BanI GGYRCC 1 cut(s) 1204
BanII GRGCYC 1 cut(s) 54
Bbv12I GWGCWC 2 cut(s) 184, 637
BbvI GCAGC 1 cut(s) 326
BccI CCATC 4 cut(s) 33, 41, 263, 604
BceAI ACGGC 1 cut(s) 31
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 3 cut(s) 84, 1014, 1251
BciVI GTATCC 2 cut(s) 225, 1111
BcnI CCSGG 4 cut(s) 357, 554, 555, 583
BcoDI GTCTC 4 cut(s) 201, 410, 872, 961
BcuI ACTAGT 1 cut(s) 1025
BfaI CTAG 6 cut(s) 548, 600, 813, 903, 942, 1026
BfuAI ACCTGC 1 cut(s) 762
BfuI GTATCC 2 cut(s) 225, 1111
BglI GCCNNNNNGGC 1 cut(s) 924
BglII AGATCT 1 cut(s) 361
BisI GCNGC 4 cut(s) 315, 444, 615, 1081
BlsI GCNGC 4 cut(s) 316, 445, 616, 1082
Bme1390I CCNGG 7 cut(s) 84, 357, 554, 555, 583, 1014, 1251
Bme18I GGWCC 1 cut(s) 586
BmeT110I CYCGRG 2 cut(s) 53, 553
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 6 cut(s) 50, 51, 551, 556, 586, 917
BmiI GGNNCC 4 cut(s) 52, 587, 919, 1206
BmrFI CCNGG 7 cut(s) 84, 357, 554, 555, 583, 1014, 1251
BmrI ACTGGG 2 cut(s) 1077, 1303
BmsI GCATC 3 cut(s) 496, 791, 899
BmtI GCTAGC 1 cut(s) 945
BmuI ACTGGG 2 cut(s) 1077, 1303
BplI GAGNNNNNCTC 2 cut(s) 286, 318
BpmI CTGGAG 2 cut(s) 361, 1035
Bpu10I CCTNAGC 1 cut(s) 888
BpuMI CCSGG 4 cut(s) 357, 554, 555, 583
BsaI GGTCTC 2 cut(s) 410, 872
BsaJI CCNNGG 6 cut(s) 115, 553, 582, 913, 1049, 1305
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 1105, 1214
Bse118I RCCGGY 2 cut(s) 102, 1360
Bse1I ACTGG 4 cut(s) 40, 708, 1072, 1298
BseBI CCWGG 3 cut(s) 84, 1014, 1251
BseDI CCNNGG 6 cut(s) 115, 553, 582, 913, 1049, 1305
BseGI GGATG 5 cut(s) 44, 52, 193, 274, 1285
BseLI CCNNNNNNNGG 3 cut(s) 203, 1105, 1214
BseMII CTCAG 1 cut(s) 419
BseNI ACTGG 4 cut(s) 40, 708, 1072, 1298
BseRI GAGGAG 1 cut(s) 307
BseSI GKGCMC 3 cut(s) 54, 637, 1209
BseXI GCAGC 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 1202
Bsh1285I CGRYCG 1 cut(s) 1200
BshFI GGCC 5 cut(s) 52, 552, 558, 918, 1304
BshNI GGYRCC 1 cut(s) 1204
BshTI ACCGGT 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 1200
BsiHKAI GWGCWC 2 cut(s) 184, 637
BsiHKCI CYCGRG 2 cut(s) 53, 553
BsiSI CCGG 5 cut(s) 103, 357, 554, 582, 1361
BslFI GGGAC 2 cut(s) 599, 812
BslI CCNNNNNNNGG 3 cut(s) 203, 1105, 1214
BsmAI GTCTC 4 cut(s) 201, 410, 872, 961
BsmFI GGGAC 2 cut(s) 599, 812
BsmI GAATGC 1 cut(s) 18
BsnI GGCC 5 cut(s) 52, 552, 558, 918, 1304
Bso31I GGTCTC 2 cut(s) 410, 872
BsoBI CYCGRG 2 cut(s) 53, 553
Bsp120I GGGCCC 1 cut(s) 50
Bsp1286I GDGCHC 4 cut(s) 54, 184, 637, 1209
Bsp143I GATC 3 cut(s) 361, 899, 1177
Bsp19I CCATGG 1 cut(s) 1305
BspACI CCGC 6 cut(s) 44, 444, 614, 1081, 1202, 1209
BspANI GGCC 5 cut(s) 52, 552, 558, 918, 1304
BspCNI CTCAG 1 cut(s) 420
BspFNI CGCG 1 cut(s) 1202
BspLI GGNNCC 4 cut(s) 52, 587, 919, 1206
BspMI ACCTGC 1 cut(s) 762
BspOI GCTAGC 1 cut(s) 945
BspPI GGATC 1 cut(s) 1172
BspT107I GGYRCC 1 cut(s) 1204
BspTNI GGTCTC 2 cut(s) 410, 872
BsrBI CCGCTC 1 cut(s) 1083
BsrFI RCCGGY 2 cut(s) 102, 1360
BsrI ACTGG 4 cut(s) 40, 708, 1072, 1298
BssAI RCCGGY 2 cut(s) 102, 1360
BssECI CCNNGG 6 cut(s) 115, 553, 582, 913, 1049, 1305
BssMI GATC 3 cut(s) 361, 899, 1177
BssT1I CCWWGG 3 cut(s) 115, 913, 1305
Bst2UI CCWGG 3 cut(s) 84, 1014, 1251
Bst4CI ACNGT 7 cut(s) 172, 350, 371, 391, 493, 730, 1198
Bst6I CTCTTC 1 cut(s) 857
BstAPI GCANNNNNTGC 1 cut(s) 641
BstC8I GCNNGC 6 cut(s) 144, 759, 943, 1085, 1209, 1362
BstDEI CTNAG 5 cut(s) 161, 428, 795, 888, 1187
BstDSI CCRYGG 2 cut(s) 1049, 1305
BstEII GGTNACC 1 cut(s) 272
BstF5I GGATG 5 cut(s) 44, 52, 193, 274, 1285
BstFNI CGCG 1 cut(s) 1202
BstKTI GATC 3 cut(s) 364, 902, 1180
BstMAI GTCTC 4 cut(s) 201, 410, 872, 961
BstMBI GATC 3 cut(s) 361, 899, 1177
BstMCI CGRYCG 1 cut(s) 1200
BstMWI GCNNNNNNNGC 6 cut(s) 620, 641, 754, 807, 924, 1208
BstNI CCWGG 3 cut(s) 84, 1014, 1251
BstNSI RCATGY 1 cut(s) 982
BstPI GGTNACC 1 cut(s) 272
BstSCI CCNGG 7 cut(s) 82, 355, 552, 553, 581, 1012, 1249
BstSLI GKGCMC 3 cut(s) 54, 637, 1209
BstUI CGCG 1 cut(s) 1202
BstV1I GCAGC 1 cut(s) 326
BstX2I RGATCY 1 cut(s) 361
BstXI CCANNNNNNTGG 1 cut(s) 1257
BstYI RGATCY 1 cut(s) 361
BsuI GTATCC 2 cut(s) 225, 1111
BsuRI GGCC 5 cut(s) 52, 552, 558, 918, 1304
BtgI CCRYGG 2 cut(s) 1049, 1305
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 5 cut(s) 44, 52, 193, 274, 1285
BtsI GCAGTG 2 cut(s) 936, 1355
BtsIMutI CAGTG 5 cut(s) 387, 637, 936, 1065, 1355
BveI ACCTGC 1 cut(s) 762
Cac8I GCNNGC 6 cut(s) 144, 759, 943, 1085, 1209, 1362
CaiI CAGNNNCTG 1 cut(s) 785
Cfr10I RCCGGY 2 cut(s) 102, 1360
Cfr13I GGNCC 6 cut(s) 50, 51, 551, 556, 586, 917
Cfr9I CCCGGG 1 cut(s) 553
Csp6I GTAC 2 cut(s) 129, 514
CspAI ACCGGT 1 cut(s) 102
CviAII CATG 5 cut(s) 156, 544, 946, 979, 1306
CviQI GTAC 2 cut(s) 129, 514
DdeI CTNAG 5 cut(s) 161, 428, 795, 888, 1187
DpnI GATC 3 cut(s) 363, 901, 1179
DpnII GATC 3 cut(s) 361, 899, 1177
EaeI YGGCCR 1 cut(s) 1302
Eam1104I CTCTTC 1 cut(s) 857
EarI CTCTTC 1 cut(s) 857
EciI GGCGGA 1 cut(s) 59
Eco130I CCWWGG 3 cut(s) 115, 913, 1305
Eco24I GRGCYC 1 cut(s) 54
Eco31I GGTCTC 2 cut(s) 410, 872
Eco47I GGWCC 1 cut(s) 586
Eco57I CTGAAG 1 cut(s) 787
Eco88I CYCGRG 2 cut(s) 53, 553
Eco91I GGTNACC 1 cut(s) 272
EcoO109I RGGNCCY 1 cut(s) 917
EcoO65I GGTNACC 1 cut(s) 272
EcoRII CCWGG 3 cut(s) 82, 1012, 1249
EcoT14I CCWWGG 3 cut(s) 115, 913, 1305
EcoT22I ATGCAT 1 cut(s) 1269
EcoT38I GRGCYC 1 cut(s) 54
ErhI CCWWGG 3 cut(s) 115, 913, 1305
FaeI CATG 5 cut(s) 159, 547, 949, 982, 1309
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 2 cut(s) 599, 812
FatI CATG 5 cut(s) 155, 543, 945, 978, 1305
FauI CCCGC 1 cut(s) 1216
Fnu4HI GCNGC 4 cut(s) 315, 444, 615, 1081
FokI GGATG 5 cut(s) 51, 59, 180, 281, 1292
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 4 cut(s) 315, 444, 615, 1081
FspBI CTAG 6 cut(s) 548, 600, 813, 903, 942, 1026
GluI GCNGC 4 cut(s) 315, 444, 615, 1081
GsuI CTGGAG 2 cut(s) 361, 1035
HaeIII GGCC 5 cut(s) 52, 552, 558, 918, 1304
HapII CCGG 5 cut(s) 103, 357, 554, 582, 1361
Hin1II CATG 5 cut(s) 159, 547, 949, 982, 1309
HincII GTYRAC 1 cut(s) 353
HindII GTYRAC 1 cut(s) 353
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 4 cut(s) 209, 232, 407, 873
HpaII CCGG 5 cut(s) 103, 357, 554, 582, 1361
HphI GGTGA 5 cut(s) 269, 301, 425, 520, 571
Hpy166II GTNNAC 5 cut(s) 108, 353, 516, 635, 1321
Hpy188I TCNGA 5 cut(s) 198, 306, 806, 872, 1232
Hpy188III TCNNGA 5 cut(s) 122, 600, 677, 903, 1106
Hpy8I GTNNAC 5 cut(s) 108, 353, 516, 635, 1321
Hpy99I CGWCG 2 cut(s) 476, 845
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 7 cut(s) 172, 350, 371, 391, 493, 730, 1198
HpyCH4IV ACGT 1 cut(s) 285
HpyCH4V TGCA 6 cut(s) 13, 635, 699, 714, 1267, 1342
HpyF10VI GCNNNNNNNGC 6 cut(s) 620, 641, 754, 807, 924, 1208
HpyF3I CTNAG 5 cut(s) 161, 428, 795, 888, 1187
HpySE526I ACGT 1 cut(s) 285
Hsp92II CATG 5 cut(s) 159, 547, 949, 982, 1309
KroI GCCGGC 1 cut(s) 1360
KroNI GCCGGC 1 cut(s) 1362
Kzo9I GATC 3 cut(s) 361, 899, 1177
LmnI GCTCC 5 cut(s) 179, 311, 322, 380, 649
Lsp1109I GCAGC 1 cut(s) 326
LweI GCATC 3 cut(s) 496, 791, 899
MaeI CTAG 6 cut(s) 548, 600, 813, 903, 942, 1026
MaeII ACGT 1 cut(s) 285
MaeIII GTNAC 4 cut(s) 61, 92, 272, 1271
MalI GATC 3 cut(s) 363, 901, 1179
MbiI CCGCTC 1 cut(s) 1083
MboI GATC 3 cut(s) 361, 899, 1177
MboII GAAGA 5 cut(s) 242, 457, 844, 847, 918
MflI RGATCY 1 cut(s) 361
MhlI GDGCHC 4 cut(s) 54, 184, 637, 1209
MlsI TGGCCA 1 cut(s) 1304
MluCI AATT 5 cut(s) 4, 732, 984, 1055, 1135
MluNI TGGCCA 1 cut(s) 1304
MlyI GAGTC 3 cut(s) 203, 401, 867
MnlI CCTC 9 cut(s) 80, 285, 288, 458, 468, 520, 860, 1194, 1383
Mox20I TGGCCA 1 cut(s) 1304
Mph1103I ATGCAT 1 cut(s) 1269
MroNI GCCGGC 1 cut(s) 1360
MroXI GAANNNNTTC 1 cut(s) 851
MscI TGGCCA 1 cut(s) 1304
MseI TTAA 2 cut(s) 575, 735
MslI CAYNNNNRTG 1 cut(s) 1278
Msp20I TGGCCA 1 cut(s) 1304
MspI CCGG 5 cut(s) 103, 357, 554, 582, 1361
MspR9I CCNGG 7 cut(s) 84, 357, 554, 555, 583, 1014, 1251
Mva1269I GAATGC 1 cut(s) 18
MvaI CCWGG 3 cut(s) 84, 1014, 1251
MvnI CGCG 1 cut(s) 1202
MwoI GCNNNNNNNGC 6 cut(s) 620, 641, 754, 807, 924, 1208
NaeI GCCGGC 1 cut(s) 1362
NciI CCSGG 4 cut(s) 357, 554, 555, 583
NcoI CCATGG 1 cut(s) 1305
NdeII GATC 3 cut(s) 361, 899, 1177
NgoMIV GCCGGC 1 cut(s) 1360
NheI GCTAGC 1 cut(s) 941
NlaIII CATG 5 cut(s) 159, 547, 949, 982, 1309
NlaIV GGNNCC 4 cut(s) 52, 587, 919, 1206
NmuCI GTSAC 1 cut(s) 1271
NsiI ATGCAT 1 cut(s) 1269
NspI RCATGY 1 cut(s) 982
PciI ACATGT 1 cut(s) 978
PctI GAATGC 1 cut(s) 18
PdiI GCCGGC 1 cut(s) 1362
PdmI GAANNNNTTC 1 cut(s) 851
PfeI GAWTC 1 cut(s) 232
PfoI TCCNGGA 1 cut(s) 1012
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 4 cut(s) 316, 445, 616, 1082
PleI GAGTC 3 cut(s) 203, 401, 867
PpsI GAGTC 3 cut(s) 203, 401, 867
PscI ACATGT 1 cut(s) 978
Psp6I CCWGG 3 cut(s) 82, 1012, 1249
PspEI GGTNACC 1 cut(s) 272
PspGI CCWGG 3 cut(s) 82, 1012, 1249
PspN4I GGNNCC 4 cut(s) 52, 587, 919, 1206
PspOMI GGGCCC 1 cut(s) 50
PspPI GGNCC 6 cut(s) 50, 51, 551, 556, 586, 917
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 1 cut(s) 361
RsaI GTAC 2 cut(s) 130, 515
RsaNI GTAC 2 cut(s) 129, 514
RseI CAYNNNNRTG 1 cut(s) 1278
SaqAI TTAA 2 cut(s) 575, 735
SatI GCNGC 4 cut(s) 315, 444, 615, 1081
Sau3AI GATC 3 cut(s) 361, 899, 1177
Sau96I GGNCC 6 cut(s) 50, 51, 551, 556, 586, 917
SchI GAGTC 3 cut(s) 203, 401, 867
ScrFI CCNGG 7 cut(s) 84, 357, 554, 555, 583, 1014, 1251
SduI GDGCHC 4 cut(s) 54, 184, 637, 1209
SfaNI GCATC 3 cut(s) 496, 791, 899
SinI GGWCC 1 cut(s) 586
SmaI CCCGGG 1 cut(s) 555
SmiMI CAYNNNNRTG 1 cut(s) 1278
SpeI ACTAGT 1 cut(s) 1025
SrfI GCCCGGGC 1 cut(s) 555
Sse9I AATT 5 cut(s) 4, 732, 984, 1055, 1135
SsiI CCGC 6 cut(s) 44, 444, 614, 1081, 1202, 1209
SspI AATATT 1 cut(s) 1009
SspMI CTAG 6 cut(s) 548, 600, 813, 903, 942, 1026
StyD4I CCNGG 7 cut(s) 82, 355, 552, 553, 581, 1012, 1249
StyI CCWWGG 3 cut(s) 115, 913, 1305
TaaI ACNGT 7 cut(s) 172, 350, 371, 391, 493, 730, 1198
TaiI ACGT 1 cut(s) 288
TaqI TCGA 3 cut(s) 822, 840, 898
TaqII GACCGA 1 cut(s) 854
TasI AATT 5 cut(s) 4, 732, 984, 1055, 1135
TauI GCSGC 3 cut(s) 446, 617, 1083
TfiI GAWTC 1 cut(s) 232
Tru1I TTAA 2 cut(s) 575, 735
Tru9I TTAA 2 cut(s) 575, 735
TscAI CASTG 5 cut(s) 394, 637, 943, 1072, 1362
TseFI GTSAC 1 cut(s) 1271
TseI GCWGC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 1271
TspDTI ATGAA 4 cut(s) 17, 182, 962, 1274
TspGWI ACGGA 4 cut(s) 460, 679, 683, 1066
TspMI CCCGGG 1 cut(s) 553
TspRI CASTG 5 cut(s) 394, 637, 943, 1072, 1362
VneI GTGCAC 1 cut(s) 633
VpaK11BI GGWCC 1 cut(s) 586
XapI RAATTY 3 cut(s) 4, 1055, 1135
XbaI TCTAGA 2 cut(s) 599, 902
XceI RCATGY 1 cut(s) 982
XcmI CCANNNNNNNNNTGG 2 cut(s) 920, 1312
XmaI CCCGGG 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 851
XspI CTAG 6 cut(s) 548, 600, 813, 903, 942, 1026
Zsp2I ATGCAT 1 cut(s) 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.