Rmu_sc0004658.1_g000003

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004658.1
OG0001265
Physical Location & Seq
Forward (+)
13455 .. 15792
2338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004658.1_g000003.1.cds

Sequence Viewer

Length: 1704 bp
atggagttcagtagcattttcctactcggcctttgcctcctctttgcttcatcagcagtgtcgaccttggccaatcccaaagctcaccaccatgaatttgttattcaagcaacaccagtgaagaggctgtgcaaaatccacaacagcatcactgtgaatggacagtaccccggaccaaccttggaagtaaacaatggcgacactctggttgtcaaagttaccaacaaagctcgatacaacgtcacgattcactggcatggtattcggcaaatgagaactggatgggcggatgggcccgaatttgtaactcaatgcccgattaggccaggagggagttacacctaccggttcacagtccagggccaagaaggtactctgtggtggcacgctcatagctcatggcttagagccaccgtgtatggagaacttattattcatccaaaacaaggagactcgtatccattccctaaaccaaatcgtcaagcaacacttcttctcggtgagtggtgggacgctaaccctattgacgtggtcaggagagcaactcgcacaggagcagctccgaatgtttctgatgcatacaccatcaacggtgaacctgggactgtcgtagttcccatagactccggtgagaccaaccttttgagagtgataaacgccgccctcaaccaacctcttttcttctccgtcgccaaccacaagctgactgtggtcggtgctgatgcctcctacaccaagcctttcaccaccaaagttctaatgctaggacccggccagaccaccgatgttttaatcaccggggaccagccaccatctcgatactacttggcggcacgtgcctatttcagtgcacaaaacgctccatttgacaacaccaccaccacagccattcttgaatacaagtccgtccgttgcaacactactaattgcaaaaagggtagaacagtaattaaacccataatgccaaagctgccagttttcaatgacacaaacactgcatctgccttcactaagagcttcagaagccctagaaaagtcgaagtcccaactgaaatcgacgagaacctcttcttcacaatcggtctcggactcaacaaatgccctaagcactttcgatctagaaggtgccaaggccccaatggcacacgcttcactgctagcatgaacaatgtctcatttgtgcttccaaacaacatgtcaattctccaagcttaccagcaaaacattcctggagtttacactagtgattttccagccaacccgccacggaaatttgattacactgggaatgtcagccgctcgctttggcaacccagttctggaacaaagggatacaagttgaagtatgggtctagagtgcaggtggtgttacaagacacaagtactgtcacaccagagaaccatccaattcatcttcatggatacgatttctacatccttgcagagggttttggaaacttcaacgtcaagactgatactaaaaagtttaaccttgttgatccacctctgaggaacactgtgtccgtgcccgcaaatggttgggcagtcatccgatttgtagctgacaatccaggtgcttgggtgatgcattgtcacttggatgtacatatcaactggggtttggccatggttttcttggtggacaatggagttggggagctgcagacaatagagcctcctcctgcagatttgcctctgtgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

567

Amino Acids

62.89

Weight (kDa)

9.22

Isoelectric Point (pI)

32.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1351
Acc36I ACCTGC 1 cut(s) 1351
AccB1I GGYRCC 1 cut(s) 1125
AccBSI CCGCTC 1 cut(s) 1299
AccI GTMKAC 1 cut(s) 62
AciI CCGC 6 cut(s) 287, 660, 830, 1262, 1297, 1530
AclWI GGATC 1 cut(s) 1493
AcoI YGGCCR 3 cut(s) 69, 772, 1623
AcsI RAATTY 3 cut(s) 95, 299, 1271
AcuI CTGAAG 1 cut(s) 1003
AcvI CACGTG 1 cut(s) 836
AfaI GTAC 4 cut(s) 167, 373, 1384, 1605
AfiI CCNNNNNNNGG 4 cut(s) 446, 1319, 1444, 1535
AflIII ACRYGT 1 cut(s) 1194
AgeI ACCGGT 1 cut(s) 345
AgsI TTSAA 5 cut(s) 107, 896, 982, 1342, 1462
AhlI ACTAGT 1 cut(s) 1241
AjiI CACGTC 1 cut(s) 529
AjnI CCWGG 5 cut(s) 325, 357, 598, 1228, 1570
AloI GAACNNNNNNTCC 2 cut(s) 1505, 1537
Alw21I GWGCWC 1 cut(s) 853
Alw26I GTCTC 4 cut(s) 444, 626, 1088, 1177
Alw44I GTGCAC 1 cut(s) 849
AlwI GGATC 1 cut(s) 1493
AoxI GGCC 8 cut(s) 28, 69, 293, 323, 361, 772, 1132, 1623
ApaI GGGCCC 1 cut(s) 297
ApaLI GTGCAC 1 cut(s) 849
ApeKI GCWGC 3 cut(s) 557, 970, 1660
ApoI RAATTY 3 cut(s) 95, 299, 1271
ArsI GACNNNNNNTTYG 4 cut(s) 625, 657, 1181, 1213
AsiGI ACCGGT 1 cut(s) 345
Asp700I GAANNNNTTC 1 cut(s) 1067
AspS9I GGNCC 7 cut(s) 173, 293, 294, 361, 767, 802, 1133
AsuC2I CCSGG 3 cut(s) 171, 771, 799
AsuHPI GGTGA 7 cut(s) 77, 512, 605, 641, 736, 787, 1594
AsuNHI GCTAGC 1 cut(s) 1157
AvaII GGWCC 3 cut(s) 173, 767, 802
BaeGI GKGCMC 3 cut(s) 297, 853, 1530
BalI TGGCCA 2 cut(s) 71, 1625
BanI GGYRCC 1 cut(s) 1125
BanII GRGCYC 1 cut(s) 297
BbrPI CACGTG 1 cut(s) 836
Bbv12I GWGCWC 1 cut(s) 853
BbvI GCAGC 3 cut(s) 569, 957, 1647
BccI CCATC 5 cut(s) 276, 284, 593, 820, 1410
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 5 cut(s) 327, 359, 600, 1230, 1572
BciVI GTATCC 3 cut(s) 468, 1325, 1415
BcnI CCSGG 3 cut(s) 171, 771, 799
BcoDI GTCTC 4 cut(s) 444, 626, 1088, 1177
BcuI ACTAGT 1 cut(s) 1241
BfaI CTAG 6 cut(s) 764, 1029, 1119, 1158, 1242, 1353
BfmI CTRYAG 2 cut(s) 1661, 1683
BfuAI ACCTGC 1 cut(s) 1351
BfuI GTATCC 3 cut(s) 468, 1325, 1415
BglI GCCNNNNNGGC 1 cut(s) 1140
BisI GCNGC 6 cut(s) 558, 660, 831, 971, 1297, 1661
BlsI GCNGC 6 cut(s) 559, 661, 832, 972, 1298, 1662
BmcAI AGTACT 1 cut(s) 1384
Bme1390I CCNGG 8 cut(s) 171, 327, 359, 600, 771, 799, 1230, 1572
Bme18I GGWCC 3 cut(s) 173, 767, 802
BmgBI CACGTC 1 cut(s) 529
BmgT120I GGNCC 7 cut(s) 173, 293, 294, 361, 767, 802, 1133
BmiI GGNNCC 5 cut(s) 295, 769, 803, 1127, 1135
BmrFI CCNGG 8 cut(s) 171, 327, 359, 600, 771, 799, 1230, 1572
BmrI ACTGGG 3 cut(s) 1293, 1308, 1624
BmsI GCATC 5 cut(s) 156, 565, 712, 1007, 1575
BmtI GCTAGC 1 cut(s) 1161
BmuI ACTGGG 3 cut(s) 1293, 1308, 1624
BoxI GACNNNNGTC 1 cut(s) 710
BplI GAGNNNNNCTC 2 cut(s) 529, 561
BpmI CTGGAG 1 cut(s) 1251
Bpu10I CCTNAGC 1 cut(s) 1104
BpuMI CCSGG 3 cut(s) 171, 771, 799
BsaAI YACGTR 1 cut(s) 836
BsaI GGTCTC 2 cut(s) 626, 1088
BsaJI CCNNGG 9 cut(s) 66, 169, 180, 358, 599, 798, 1129, 1265, 1626
BsaWI WCCGGW 2 cut(s) 345, 626
Bsc4I CCNNNNNNNGG 4 cut(s) 446, 1319, 1444, 1535
Bse118I RCCGGY 1 cut(s) 345
Bse1I ACTGG 7 cut(s) 116, 257, 283, 974, 1288, 1314, 1619
BseBI CCWGG 5 cut(s) 327, 359, 600, 1230, 1572
BseDI CCNNGG 9 cut(s) 66, 169, 180, 358, 599, 798, 1129, 1265, 1626
BseGI GGATG 7 cut(s) 287, 295, 436, 1402, 1434, 1548, 1606
BseLI CCNNNNNNNGG 4 cut(s) 446, 1319, 1444, 1535
BseMII CTCAG 1 cut(s) 1499
BseNI ACTGG 7 cut(s) 116, 257, 283, 974, 1288, 1314, 1619
BseRI GAGGAG 2 cut(s) 29, 1668
BseSI GKGCMC 3 cut(s) 297, 853, 1530
BseXI GCAGC 3 cut(s) 569, 957, 1647
BsgI GTGCAG 1 cut(s) 1379
BshFI GGCC 8 cut(s) 30, 71, 295, 325, 363, 774, 1134, 1625
BshNI GGYRCC 1 cut(s) 1125
BshTI ACCGGT 1 cut(s) 345
BsiHKAI GWGCWC 1 cut(s) 853
BsiSI CCGG 5 cut(s) 171, 346, 627, 771, 798
BslFI GGGAC 4 cut(s) 524, 616, 815, 1028
BslI CCNNNNNNNGG 4 cut(s) 446, 1319, 1444, 1535
BsmAI GTCTC 4 cut(s) 444, 626, 1088, 1177
BsmFI GGGAC 4 cut(s) 524, 616, 815, 1028
BsnI GGCC 8 cut(s) 30, 71, 295, 325, 363, 774, 1134, 1625
Bso31I GGTCTC 2 cut(s) 626, 1088
Bsp120I GGGCCC 1 cut(s) 293
Bsp1286I GDGCHC 3 cut(s) 297, 853, 1530
Bsp1407I TGTACA 1 cut(s) 1603
Bsp143I GATC 2 cut(s) 1115, 1498
Bsp19I CCATGG 1 cut(s) 1626
BspACI CCGC 6 cut(s) 287, 660, 830, 1262, 1297, 1530
BspANI GGCC 8 cut(s) 30, 71, 295, 325, 363, 774, 1134, 1625
BspCNI CTCAG 1 cut(s) 1500
BspLI GGNNCC 5 cut(s) 295, 769, 803, 1127, 1135
BspMAI CTGCAG 2 cut(s) 1665, 1687
BspMI ACCTGC 1 cut(s) 1351
BspOI GCTAGC 1 cut(s) 1161
BspPI GGATC 1 cut(s) 1493
BspT107I GGYRCC 1 cut(s) 1125
BspTNI GGTCTC 2 cut(s) 626, 1088
BsrBI CCGCTC 1 cut(s) 1299
BsrFI RCCGGY 1 cut(s) 345
BsrGI TGTACA 1 cut(s) 1603
BsrI ACTGG 7 cut(s) 116, 257, 283, 974, 1288, 1314, 1619
BssAI RCCGGY 1 cut(s) 345
BssECI CCNNGG 9 cut(s) 66, 169, 180, 358, 599, 798, 1129, 1265, 1626
BssMI GATC 2 cut(s) 1115, 1498
BssT1I CCWWGG 4 cut(s) 66, 180, 1129, 1626
Bst2UI CCWGG 5 cut(s) 327, 359, 600, 1230, 1572
Bst6I CTCTTC 2 cut(s) 116, 1073
BstAUI TGTACA 1 cut(s) 1603
BstBAI YACGTR 1 cut(s) 836
BstC8I GCNNGC 4 cut(s) 387, 1159, 1301, 1530
BstDEI CTNAG 4 cut(s) 404, 1011, 1104, 1508
BstDSI CCRYGG 2 cut(s) 1265, 1626
BstENI CCTNNNNNAGG 1 cut(s) 1442
BstF5I GGATG 7 cut(s) 287, 295, 436, 1402, 1434, 1548, 1606
BstKTI GATC 2 cut(s) 1118, 1501
BstMAI GTCTC 4 cut(s) 444, 626, 1088, 1177
BstMBI GATC 2 cut(s) 1115, 1498
BstMWI GCNNNNNNNGC 6 cut(s) 53, 836, 857, 970, 1023, 1140
BstNI CCWGG 5 cut(s) 327, 359, 600, 1230, 1572
BstNSI RCATGY 1 cut(s) 1198
BstPAI GACNNNNGTC 1 cut(s) 710
BstSCI CCNGG 8 cut(s) 169, 325, 357, 598, 769, 797, 1228, 1570
BstSFI CTRYAG 2 cut(s) 1661, 1683
BstSLI GKGCMC 3 cut(s) 297, 853, 1530
BstV1I GCAGC 3 cut(s) 569, 957, 1647
BstXI CCANNNNNNTGG 1 cut(s) 1578
BsuI GTATCC 3 cut(s) 468, 1325, 1415
BsuRI GGCC 8 cut(s) 30, 71, 295, 325, 363, 774, 1134, 1625
BtgI CCRYGG 2 cut(s) 1265, 1626
BtrI CACGTC 1 cut(s) 529
BtsCI GGATG 7 cut(s) 287, 295, 436, 1402, 1434, 1548, 1606
BtsI GCAGTG 3 cut(s) 63, 993, 1152
BtsIMutI CAGTG 9 cut(s) 63, 123, 150, 250, 853, 993, 1152, 1281, 1515
BveI ACCTGC 1 cut(s) 1351
Cac8I GCNNGC 4 cut(s) 387, 1159, 1301, 1530
Cfr10I RCCGGY 1 cut(s) 345
Cfr13I GGNCC 7 cut(s) 173, 293, 294, 361, 767, 802, 1133
CseI GACGC 1 cut(s) 521
Csp6I GTAC 4 cut(s) 166, 372, 1383, 1604
CspAI ACCGGT 1 cut(s) 345
CviAII CATG 7 cut(s) 92, 257, 399, 1162, 1195, 1418, 1627
CviQI GTAC 4 cut(s) 166, 372, 1383, 1604
DdeI CTNAG 4 cut(s) 404, 1011, 1104, 1508
DpnI GATC 2 cut(s) 1117, 1500
DpnII GATC 2 cut(s) 1115, 1498
EaeI YGGCCR 3 cut(s) 69, 772, 1623
Eam1104I CTCTTC 2 cut(s) 116, 1073
EarI CTCTTC 2 cut(s) 116, 1073
EciI GGCGGA 1 cut(s) 302
Eco130I CCWWGG 4 cut(s) 66, 180, 1129, 1626
Eco24I GRGCYC 1 cut(s) 297
Eco31I GGTCTC 2 cut(s) 626, 1088
Eco47I GGWCC 3 cut(s) 173, 767, 802
Eco57I CTGAAG 1 cut(s) 1003
Eco72I CACGTG 1 cut(s) 836
EcoNI CCTNNNNNAGG 1 cut(s) 1442
EcoO109I RGGNCCY 2 cut(s) 767, 1133
EcoRII CCWGG 5 cut(s) 325, 357, 598, 1228, 1570
EcoT14I CCWWGG 4 cut(s) 66, 180, 1129, 1626
EcoT22I ATGCAT 2 cut(s) 580, 1590
EcoT38I GRGCYC 1 cut(s) 297
ErhI CCWWGG 4 cut(s) 66, 180, 1129, 1626
FaeI CATG 7 cut(s) 95, 260, 402, 1165, 1198, 1421, 1630
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 4 cut(s) 524, 616, 815, 1028
FatI CATG 7 cut(s) 91, 256, 398, 1161, 1194, 1417, 1626
FauI CCCGC 2 cut(s) 1269, 1537
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 6 cut(s) 558, 660, 831, 971, 1297, 1661
FokI GGATG 7 cut(s) 294, 302, 423, 1389, 1421, 1535, 1613
FriOI GRGCYC 1 cut(s) 297
Fsp4HI GCNGC 6 cut(s) 558, 660, 831, 971, 1297, 1661
FspBI CTAG 6 cut(s) 764, 1029, 1119, 1158, 1242, 1353
GluI GCNGC 6 cut(s) 558, 660, 831, 971, 1297, 1661
GsuI CTGGAG 1 cut(s) 1251
HaeIII GGCC 8 cut(s) 30, 71, 295, 325, 363, 774, 1134, 1625
HapII CCGG 5 cut(s) 171, 346, 627, 771, 798
HgaI GACGC 1 cut(s) 521
Hin1II CATG 7 cut(s) 95, 260, 402, 1165, 1198, 1421, 1630
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HindIII AAGCTT 1 cut(s) 1209
HinfI GANTC 4 cut(s) 247, 452, 623, 1089
HpaII CCGG 5 cut(s) 171, 346, 627, 771, 798
HphI GGTGA 7 cut(s) 77, 512, 605, 641, 736, 787, 1594
Hpy166II GTNNAC 7 cut(s) 63, 190, 351, 596, 851, 1237, 1642
Hpy188I TCNGA 6 cut(s) 564, 574, 1022, 1088, 1509, 1553
Hpy188III TCNNGA 8 cut(s) 244, 535, 816, 893, 1119, 1320, 1353, 1468
Hpy8I GTNNAC 7 cut(s) 63, 190, 351, 596, 851, 1237, 1642
Hpy99I CGWCG 2 cut(s) 692, 1061
HpyAV CCTTC 3 cut(s) 362, 1015, 1116
HpyCH4IV ACGT 4 cut(s) 240, 528, 835, 1464
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 836, 857, 970, 1023, 1140
HpyF3I CTNAG 4 cut(s) 404, 1011, 1104, 1508
HpySE526I ACGT 4 cut(s) 240, 528, 835, 1464
Hsp92II CATG 7 cut(s) 95, 260, 402, 1165, 1198, 1421, 1630
Kzo9I GATC 2 cut(s) 1115, 1498
LmnI GCTCC 4 cut(s) 554, 565, 865, 1657
Lsp1109I GCAGC 3 cut(s) 569, 957, 1647
LweI GCATC 5 cut(s) 156, 565, 712, 1007, 1575
MaeI CTAG 6 cut(s) 764, 1029, 1119, 1158, 1242, 1353
MaeII ACGT 4 cut(s) 240, 528, 835, 1464
MaeIII GTNAC 7 cut(s) 217, 241, 304, 335, 1368, 1387, 1592
MalI GATC 2 cut(s) 1117, 1500
MbiI CCGCTC 1 cut(s) 1299
MboI GATC 2 cut(s) 1115, 1498
MboII GAAGA 6 cut(s) 133, 485, 673, 1060, 1063, 1406
MhlI GDGCHC 3 cut(s) 297, 853, 1530
MlsI TGGCCA 2 cut(s) 71, 1625
MluCI AATT 7 cut(s) 95, 299, 925, 948, 1200, 1271, 1407
MluNI TGGCCA 2 cut(s) 71, 1625
MlyI GAGTC 3 cut(s) 446, 617, 1083
Mox20I TGGCCA 2 cut(s) 71, 1625
Mph1103I ATGCAT 2 cut(s) 580, 1590
MroXI GAANNNNTTC 1 cut(s) 1067
MscI TGGCCA 2 cut(s) 71, 1625
MseI TTAA 4 cut(s) 791, 951, 1488, 1702
MslI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1416, 1599
Msp20I TGGCCA 2 cut(s) 71, 1625
MspI CCGG 5 cut(s) 171, 346, 627, 771, 798
MspR9I CCNGG 8 cut(s) 171, 327, 359, 600, 771, 799, 1230, 1572
MvaI CCWGG 5 cut(s) 327, 359, 600, 1230, 1572
MwoI GCNNNNNNNGC 6 cut(s) 53, 836, 857, 970, 1023, 1140
NciI CCSGG 3 cut(s) 171, 771, 799
NcoI CCATGG 1 cut(s) 1626
NdeII GATC 2 cut(s) 1115, 1498
NheI GCTAGC 1 cut(s) 1157
NlaIII CATG 7 cut(s) 95, 260, 402, 1165, 1198, 1421, 1630
NlaIV GGNNCC 5 cut(s) 295, 769, 803, 1127, 1135
NmeAIII GCCGAG 1 cut(s) 6
NmuCI GTSAC 3 cut(s) 241, 1387, 1592
NsiI ATGCAT 2 cut(s) 580, 1590
NspI RCATGY 1 cut(s) 1198
PaqCI CACCTGC 1 cut(s) 1351
PciI ACATGT 1 cut(s) 1194
PdmI GAANNNNTTC 1 cut(s) 1067
PfeI GAWTC 1 cut(s) 247
PflFI GACNNNGTC 1 cut(s) 530
PfoI TCCNGGA 1 cut(s) 1228
PinAI ACCGGT 1 cut(s) 345
PkrI GCNGC 6 cut(s) 559, 661, 832, 972, 1298, 1662
PleI GAGTC 3 cut(s) 446, 617, 1083
PmaCI CACGTG 1 cut(s) 836
PmlI CACGTG 1 cut(s) 836
PpsI GAGTC 3 cut(s) 446, 617, 1083
Ppu21I YACGTR 1 cut(s) 836
PpuMI RGGWCCY 1 cut(s) 767
PscI ACATGT 1 cut(s) 1194
PshAI GACNNNNGTC 1 cut(s) 710
Psp5II RGGWCCY 1 cut(s) 767
Psp6I CCWGG 5 cut(s) 325, 357, 598, 1228, 1570
PspCI CACGTG 1 cut(s) 836
PspGI CCWGG 5 cut(s) 325, 357, 598, 1228, 1570
PspN4I GGNNCC 5 cut(s) 295, 769, 803, 1127, 1135
PspOMI GGGCCC 1 cut(s) 293
PspPI GGNCC 7 cut(s) 173, 293, 294, 361, 767, 802, 1133
PspPPI RGGWCCY 1 cut(s) 767
PstI CTGCAG 2 cut(s) 1665, 1687
PsyI GACNNNGTC 1 cut(s) 530
RsaI GTAC 4 cut(s) 167, 373, 1384, 1605
RsaNI GTAC 4 cut(s) 166, 372, 1383, 1604
RseI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1416, 1599
SalI GTCGAC 1 cut(s) 61
SaqAI TTAA 4 cut(s) 791, 951, 1488, 1702
SatI GCNGC 6 cut(s) 558, 660, 831, 971, 1297, 1661
Sau3AI GATC 2 cut(s) 1115, 1498
Sau96I GGNCC 7 cut(s) 173, 293, 294, 361, 767, 802, 1133
ScaI AGTACT 1 cut(s) 1384
SchI GAGTC 3 cut(s) 446, 617, 1083
ScrFI CCNGG 8 cut(s) 171, 327, 359, 600, 771, 799, 1230, 1572
SduI GDGCHC 3 cut(s) 297, 853, 1530
SfaNI GCATC 5 cut(s) 156, 565, 712, 1007, 1575
SfcI CTRYAG 2 cut(s) 1661, 1683
SinI GGWCC 3 cut(s) 173, 767, 802
SmiMI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1416, 1599
SpeI ACTAGT 1 cut(s) 1241
Sse9I AATT 7 cut(s) 95, 299, 925, 948, 1200, 1271, 1407
SsiI CCGC 6 cut(s) 287, 660, 830, 1262, 1297, 1530
SspMI CTAG 6 cut(s) 764, 1029, 1119, 1158, 1242, 1353
StyD4I CCNGG 8 cut(s) 169, 325, 357, 598, 769, 797, 1228, 1570
StyI CCWWGG 4 cut(s) 66, 180, 1129, 1626
TaiI ACGT 4 cut(s) 243, 531, 838, 1467
TaqI TCGA 6 cut(s) 62, 232, 817, 1038, 1056, 1114
TaqII GACCGA 1 cut(s) 1070
TasI AATT 7 cut(s) 95, 299, 925, 948, 1200, 1271, 1407
TatI WGTACW 2 cut(s) 1382, 1603
TauI GCSGC 3 cut(s) 662, 833, 1299
TfiI GAWTC 1 cut(s) 247
Tru1I TTAA 4 cut(s) 791, 951, 1488, 1702
Tru9I TTAA 4 cut(s) 791, 951, 1488, 1702
TscAI CASTG 9 cut(s) 63, 123, 157, 257, 853, 1000, 1159, 1288, 1522
TseFI GTSAC 3 cut(s) 241, 1387, 1592
TseI GCWGC 3 cut(s) 557, 970, 1660
Tsp45I GTSAC 3 cut(s) 241, 1387, 1592
TspDTI ATGAA 6 cut(s) 39, 108, 425, 1178, 1400, 1406
TspGWI ACGGA 5 cut(s) 676, 895, 899, 1282, 1513
TspRI CASTG 9 cut(s) 63, 123, 157, 257, 853, 1000, 1159, 1288, 1522
Tth111I GACNNNGTC 1 cut(s) 530
VneI GTGCAC 1 cut(s) 849
VpaK11BI GGWCC 3 cut(s) 173, 767, 802
XagI CCTNNNNNAGG 1 cut(s) 1442
XapI RAATTY 3 cut(s) 95, 299, 1271
XbaI TCTAGA 2 cut(s) 1118, 1352
XceI RCATGY 1 cut(s) 1198
XcmI CCANNNNNNNNNTGG 2 cut(s) 1136, 1633
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 1 cut(s) 1067
XspI CTAG 6 cut(s) 764, 1029, 1119, 1158, 1242, 1353
ZrmI AGTACT 1 cut(s) 1384
Zsp2I ATGCAT 2 cut(s) 580, 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.