RchiOBHm_Chr1g0341901

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001265
Physical Location & Seq
Reverse (-)
33811630 .. 33814185
2556 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56858

Sequence Viewer

Length: 1731 bp
ATGGAGCTCAGTAGCATTTTCCTACTCGGCCTTTGCCTCCTCTTTGCTTCATCAGCAATGTCGACCTTGGCCAATCCCAAAGCTCACCACCATGAATTTGTTATCCAAGCAACACCAGTGAAGAGACTATGCAAAATCCACAACAGCATCACTGTGAATGGACAGTACCCTGGACCAACCCTGGTAGTAAACAATGGCGACACTCTGGTTGTCAAAGTTACCAACAAAGCTCGATACAACGTCACAATTCACTGGCATGGTATTCGGCAAATGAGAACTGGATGGGCGGATGGGCCCGAATTTGTAACTCAATGCCCGATTAGGCCAGGAGGGAGTTACACCTACCGGTTCACAGTCCAGGGCCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCAAAACAAGGAGACTCGTATCCATTCCCTAAACCAAATCGTCAAGCAACACTTCTTCTCGGTGAGTGGTGGGACGCTAACCCTATTGACGTGGTGAGGACAGCAACTCGCACAGGAGCAGCTCCGAATGTTTCTGATGCATACACTATCAACGGTCAACCTGGTGATCTTTACAATTGCTCCAGCAAAGGGACTGTCGTAGTTCCCATAGACTCCGGTGAGACCAACCTACTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTTGCCAACCACAAGCTGACTGTGGTCGGTGCTGATGCCTCCTACACCAAGCGTTTCACCACCAAAGTTCTCATGCTAGGACCCGGCCAGACCACCGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCAAGTGCCTATTTCAGTGCACAAAACGCTCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTCCGTTGCAACACTACTAATTGCAATAAGGGTAGAACAGTAATTAAACCCGTAATGCCAAAGCTGCCAGTTTTCAATGACACAAACACTGCATCTGCCTTCACTACGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATTGGTCTCGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGGTGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAGTTCTCCAAGCTTACCAGCAAAACATTCCGGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCGCAGAAATTTGATTACACTGGGAATGTGAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGGATACAAGTTGAAGTATGGGTCTAGAGTGCAGGTGGTATTACAAGACACAAGTATTGTCACACCAGAGAACCATCCAATTCATCTTCATGGATACGATTTCTACATCCTTGCAGAGGGTTTTGGAAACTTCAATACCAAGACTGATACTAAAAAGTTTAATCTTGTTGATCCACCTCTGAGGAATACTGTGTCGGTGCCCGCAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGGTGATGCATTGTCACTTGGATGTACATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAGACAATAGAGCCTCCGCCTGCAGATTTGCCTCTGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

576

Amino Acids

63.62

Weight (kDa)

9.12

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 35 - 149 3.6e-44 Multicopper oxidase
Cu-oxidase PF00394 162 - 310 1.1e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 425 - 558 2.4e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1378
Acc36I ACCTGC 1 cut(s) 1378
AccB1I GGYRCC 2 cut(s) 1152, 1552
AccBSI CCGCTC 1 cut(s) 1326
AccI GTMKAC 1 cut(s) 62
AciI CCGC 8 cut(s) 287, 687, 857, 1289, 1292, 1324, 1557, 1706
AclWI GGATC 1 cut(s) 1520
AcoI YGGCCR 3 cut(s) 69, 799, 1650
AcsI RAATTY 3 cut(s) 95, 299, 1298
AcuI CTGAAG 1 cut(s) 1030
AfaI GTAC 3 cut(s) 167, 373, 1632
AfiI CCNNNNNNNGG 5 cut(s) 446, 627, 1346, 1471, 1562
AflIII ACRYGT 1 cut(s) 1221
AgeI ACCGGT 1 cut(s) 345
AgsI TTSAA 4 cut(s) 923, 1009, 1369, 1489
AhlI ACTAGT 1 cut(s) 1268
AjiI CACGTC 1 cut(s) 529
AjnI CCWGG 6 cut(s) 169, 180, 325, 357, 598, 1597
Alw21I GWGCWC 3 cut(s) 9, 427, 880
Alw26I GTCTC 5 cut(s) 118, 444, 653, 1115, 1204
Alw44I GTGCAC 1 cut(s) 876
AlwI GGATC 1 cut(s) 1520
AoxI GGCC 8 cut(s) 28, 69, 293, 323, 361, 799, 1159, 1650
ApaI GGGCCC 1 cut(s) 297
ApaLI GTGCAC 1 cut(s) 876
ApeKI GCWGC 3 cut(s) 557, 997, 1687
ApoI RAATTY 3 cut(s) 95, 299, 1298
ArsI GACNNNNNNTTYG 4 cut(s) 618, 650, 1208, 1240
AsiGI ACCGGT 1 cut(s) 345
Asp700I GAANNNNTTC 1 cut(s) 1094
AspS9I GGNCC 7 cut(s) 173, 293, 294, 361, 794, 829, 1160
AsuC2I CCSGG 3 cut(s) 798, 826, 1257
AsuHPI GGTGA 8 cut(s) 77, 512, 544, 614, 668, 763, 814, 1621
AsuNHI GCTAGC 1 cut(s) 1184
AvaII GGWCC 3 cut(s) 173, 794, 829
BaeGI GKGCMC 3 cut(s) 297, 880, 1557
BalI TGGCCA 2 cut(s) 71, 1652
BanI GGYRCC 2 cut(s) 1152, 1552
BanII GRGCYC 2 cut(s) 9, 297
Bbv12I GWGCWC 3 cut(s) 9, 427, 880
BbvI GCAGC 3 cut(s) 569, 984, 1674
BccI CCATC 4 cut(s) 276, 284, 847, 1437
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 6 cut(s) 171, 182, 327, 359, 600, 1599
BciVI GTATCC 3 cut(s) 468, 1352, 1442
BcnI CCSGG 3 cut(s) 798, 826, 1257
BcoDI GTCTC 5 cut(s) 118, 444, 653, 1115, 1204
BcuI ACTAGT 1 cut(s) 1268
BfaI CTAG 6 cut(s) 791, 1056, 1146, 1185, 1269, 1380
BfmI CTRYAG 2 cut(s) 1688, 1710
BfuAI ACCTGC 1 cut(s) 1378
BfuI GTATCC 3 cut(s) 468, 1352, 1442
BglI GCCNNNNNGGC 1 cut(s) 1167
BisI GCNGC 7 cut(s) 558, 687, 858, 998, 1292, 1324, 1688
BlsI GCNGC 7 cut(s) 559, 688, 859, 999, 1293, 1325, 1689
Bme1390I CCNGG 9 cut(s) 171, 182, 327, 359, 600, 798, 826, 1257, 1599
Bme18I GGWCC 3 cut(s) 173, 794, 829
BmgBI CACGTC 1 cut(s) 529
BmgT120I GGNCC 7 cut(s) 173, 293, 294, 361, 794, 829, 1160
BmiI GGNNCC 6 cut(s) 295, 796, 830, 1154, 1162, 1554
BmrFI CCNGG 9 cut(s) 171, 182, 327, 359, 600, 798, 826, 1257, 1599
BmrI ACTGGG 3 cut(s) 1320, 1335, 1651
BmsI GCATC 5 cut(s) 156, 565, 739, 1034, 1602
BmtI GCTAGC 1 cut(s) 1188
BmuI ACTGGG 3 cut(s) 1320, 1335, 1651
BoxI GACNNNNGTC 1 cut(s) 737
BpmI CTGGAG 1 cut(s) 604
Bpu10I CCTNAGC 1 cut(s) 1131
BpuMI CCSGG 3 cut(s) 798, 826, 1257
BsaI GGTCTC 2 cut(s) 653, 1115
BsaJI CCNNGG 7 cut(s) 66, 169, 180, 358, 825, 1156, 1653
BsaWI WCCGGW 2 cut(s) 345, 653
BsaXI ACNNNNNCTCC 2 cut(s) 602, 632
Bsc4I CCNNNNNNNGG 5 cut(s) 446, 627, 1346, 1471, 1562
Bse118I RCCGGY 1 cut(s) 345
Bse1I ACTGG 7 cut(s) 116, 257, 283, 1001, 1315, 1341, 1646
Bse3DI GCAATG 1 cut(s) 63
BseBI CCWGG 6 cut(s) 171, 182, 327, 359, 600, 1599
BseDI CCNNGG 7 cut(s) 66, 169, 180, 358, 825, 1156, 1653
BseGI GGATG 6 cut(s) 287, 295, 436, 1429, 1461, 1633
BseLI CCNNNNNNNGG 5 cut(s) 446, 627, 1346, 1471, 1562
BseMI GCAATG 1 cut(s) 63
BseMII CTCAG 3 cut(s) 22, 662, 1526
BseNI ACTGG 7 cut(s) 116, 257, 283, 1001, 1315, 1341, 1646
BseRI GAGGAG 1 cut(s) 29
BseSI GKGCMC 3 cut(s) 297, 880, 1557
BseXI GCAGC 3 cut(s) 569, 984, 1674
BsgI GTGCAG 1 cut(s) 1406
BshFI GGCC 8 cut(s) 30, 71, 295, 325, 363, 801, 1161, 1652
BshNI GGYRCC 2 cut(s) 1152, 1552
BshTI ACCGGT 1 cut(s) 345
BsiHKAI GWGCWC 3 cut(s) 9, 427, 880
BsiSI CCGG 5 cut(s) 346, 654, 798, 825, 1256
BslFI GGGAC 4 cut(s) 524, 643, 842, 1055
BslI CCNNNNNNNGG 5 cut(s) 446, 627, 1346, 1471, 1562
BsmAI GTCTC 5 cut(s) 118, 444, 653, 1115, 1204
BsmFI GGGAC 4 cut(s) 524, 643, 842, 1055
BsnI GGCC 8 cut(s) 30, 71, 295, 325, 363, 801, 1161, 1652
Bso31I GGTCTC 2 cut(s) 653, 1115
Bsp120I GGGCCC 1 cut(s) 293
Bsp1286I GDGCHC 5 cut(s) 9, 297, 427, 880, 1557
Bsp1407I TGTACA 1 cut(s) 1630
Bsp143I GATC 3 cut(s) 604, 1142, 1525
Bsp19I CCATGG 1 cut(s) 1653
BspACI CCGC 8 cut(s) 287, 687, 857, 1289, 1292, 1324, 1557, 1706
BspANI GGCC 8 cut(s) 30, 71, 295, 325, 363, 801, 1161, 1652
BspCNI CTCAG 3 cut(s) 21, 663, 1527
BspLI GGNNCC 6 cut(s) 295, 796, 830, 1154, 1162, 1554
BspMAI CTGCAG 2 cut(s) 1692, 1714
BspMI ACCTGC 1 cut(s) 1378
BspOI GCTAGC 1 cut(s) 1188
BspPI GGATC 1 cut(s) 1520
BspT107I GGYRCC 2 cut(s) 1152, 1552
BspTNI GGTCTC 2 cut(s) 653, 1115
BsrBI CCGCTC 1 cut(s) 1326
BsrDI GCAATG 1 cut(s) 63
BsrFI RCCGGY 1 cut(s) 345
BsrGI TGTACA 1 cut(s) 1630
BsrI ACTGG 7 cut(s) 116, 257, 283, 1001, 1315, 1341, 1646
BssAI RCCGGY 1 cut(s) 345
BssECI CCNNGG 7 cut(s) 66, 169, 180, 358, 825, 1156, 1653
BssMI GATC 3 cut(s) 604, 1142, 1525
BssT1I CCWWGG 3 cut(s) 66, 1156, 1653
Bst2UI CCWGG 6 cut(s) 171, 182, 327, 359, 600, 1599
Bst4CI ACNGT 9 cut(s) 154, 165, 355, 415, 593, 634, 736, 973, 1546
Bst6I CTCTTC 2 cut(s) 116, 1100
BstAUI TGTACA 1 cut(s) 1630
BstC8I GCNNGC 5 cut(s) 387, 1186, 1328, 1557, 1710
BstDEI CTNAG 5 cut(s) 8, 404, 671, 1131, 1535
BstDSI CCRYGG 1 cut(s) 1653
BstENI CCTNNNNNAGG 1 cut(s) 1469
BstF5I GGATG 6 cut(s) 287, 295, 436, 1429, 1461, 1633
BstKTI GATC 3 cut(s) 607, 1145, 1528
BstMAI GTCTC 5 cut(s) 118, 444, 653, 1115, 1204
BstMBI GATC 3 cut(s) 604, 1142, 1525
BstMWI GCNNNNNNNGC 6 cut(s) 53, 863, 884, 997, 1050, 1167
BstNI CCWGG 6 cut(s) 171, 182, 327, 359, 600, 1599
BstNSI RCATGY 1 cut(s) 1225
BstPAI GACNNNNGTC 1 cut(s) 737
BstSCI CCNGG 9 cut(s) 169, 180, 325, 357, 598, 796, 824, 1255, 1597
BstSFI CTRYAG 2 cut(s) 1688, 1710
BstSLI GKGCMC 3 cut(s) 297, 880, 1557
BstV1I GCAGC 3 cut(s) 569, 984, 1674
BstXI CCANNNNNNTGG 1 cut(s) 1605
BsuI GTATCC 3 cut(s) 468, 1352, 1442
BsuRI GGCC 8 cut(s) 30, 71, 295, 325, 363, 801, 1161, 1652
BtgI CCRYGG 1 cut(s) 1653
BtrI CACGTC 1 cut(s) 529
BtsCI GGATG 6 cut(s) 287, 295, 436, 1429, 1461, 1633
BtsI GCAGTG 2 cut(s) 1020, 1179
BtsIMutI CAGTG 7 cut(s) 123, 150, 250, 880, 1020, 1179, 1308
BveI ACCTGC 1 cut(s) 1378
Cac8I GCNNGC 5 cut(s) 387, 1186, 1328, 1557, 1710
Cfr10I RCCGGY 1 cut(s) 345
Cfr13I GGNCC 7 cut(s) 173, 293, 294, 361, 794, 829, 1160
CseI GACGC 1 cut(s) 521
CsiI ACCWGGT 1 cut(s) 598
Csp6I GTAC 3 cut(s) 166, 372, 1631
CspAI ACCGGT 1 cut(s) 345
CviAII CATG 8 cut(s) 92, 257, 399, 787, 1189, 1222, 1445, 1654
CviQI GTAC 3 cut(s) 166, 372, 1631
DdeI CTNAG 5 cut(s) 8, 404, 671, 1131, 1535
DpnI GATC 3 cut(s) 606, 1144, 1527
DpnII GATC 3 cut(s) 604, 1142, 1525
EaeI YGGCCR 3 cut(s) 69, 799, 1650
Eam1104I CTCTTC 2 cut(s) 116, 1100
EarI CTCTTC 2 cut(s) 116, 1100
EciI GGCGGA 2 cut(s) 302, 1695
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 3 cut(s) 66, 1156, 1653
Eco24I GRGCYC 2 cut(s) 9, 297
Eco31I GGTCTC 2 cut(s) 653, 1115
Eco47I GGWCC 3 cut(s) 173, 794, 829
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 1030
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 1469
EcoO109I RGGNCCY 2 cut(s) 794, 1160
EcoRII CCWGG 6 cut(s) 169, 180, 325, 357, 598, 1597
EcoT14I CCWWGG 3 cut(s) 66, 1156, 1653
EcoT22I ATGCAT 2 cut(s) 580, 1617
EcoT38I GRGCYC 2 cut(s) 9, 297
ErhI CCWWGG 3 cut(s) 66, 1156, 1653
FaeI CATG 8 cut(s) 95, 260, 402, 790, 1192, 1225, 1448, 1657
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 4 cut(s) 524, 643, 842, 1055
FatI CATG 8 cut(s) 91, 256, 398, 786, 1188, 1221, 1444, 1653
FauI CCCGC 2 cut(s) 1296, 1564
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 7 cut(s) 558, 687, 858, 998, 1292, 1324, 1688
FokI GGATG 6 cut(s) 294, 302, 423, 1416, 1448, 1640
FriOI GRGCYC 2 cut(s) 9, 297
Fsp4HI GCNGC 7 cut(s) 558, 687, 858, 998, 1292, 1324, 1688
FspBI CTAG 6 cut(s) 791, 1056, 1146, 1185, 1269, 1380
GluI GCNGC 7 cut(s) 558, 687, 858, 998, 1292, 1324, 1688
GsuI CTGGAG 1 cut(s) 604
HaeIII GGCC 8 cut(s) 30, 71, 295, 325, 363, 801, 1161, 1652
HapII CCGG 5 cut(s) 346, 654, 798, 825, 1256
HgaI GACGC 1 cut(s) 521
Hin1II CATG 8 cut(s) 95, 260, 402, 790, 1192, 1225, 1448, 1657
HincII GTYRAC 2 cut(s) 63, 596
HindII GTYRAC 2 cut(s) 63, 596
HindIII AAGCTT 1 cut(s) 1236
HinfI GANTC 3 cut(s) 452, 650, 1116
HpaII CCGG 5 cut(s) 346, 654, 798, 825, 1256
HphI GGTGA 8 cut(s) 77, 512, 544, 614, 668, 763, 814, 1621
Hpy166II GTNNAC 7 cut(s) 63, 190, 351, 596, 878, 1264, 1669
Hpy188I TCNGA 6 cut(s) 564, 574, 1049, 1115, 1536, 1580
Hpy188III TCNNGA 5 cut(s) 843, 920, 1146, 1347, 1380
Hpy8I GTNNAC 7 cut(s) 63, 190, 351, 596, 878, 1264, 1669
Hpy99I CGWCG 1 cut(s) 1088
HpyAV CCTTC 3 cut(s) 362, 1042, 1143
HpyCH4III ACNGT 9 cut(s) 154, 165, 355, 415, 593, 634, 736, 973, 1546
HpyCH4IV ACGT 2 cut(s) 240, 528
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 863, 884, 997, 1050, 1167
HpyF3I CTNAG 5 cut(s) 8, 404, 671, 1131, 1535
HpySE526I ACGT 2 cut(s) 240, 528
Hsp92II CATG 8 cut(s) 95, 260, 402, 790, 1192, 1225, 1448, 1657
Kzo9I GATC 3 cut(s) 604, 1142, 1525
LmnI GCTCC 7 cut(s) 4, 422, 554, 565, 623, 892, 1684
Lsp1109I GCAGC 3 cut(s) 569, 984, 1674
LweI GCATC 5 cut(s) 156, 565, 739, 1034, 1602
MabI ACCWGGT 1 cut(s) 598
MaeI CTAG 6 cut(s) 791, 1056, 1146, 1185, 1269, 1380
MaeII ACGT 2 cut(s) 240, 528
MaeIII GTNAC 6 cut(s) 217, 241, 304, 335, 1414, 1619
MalI GATC 3 cut(s) 606, 1144, 1527
MbiI CCGCTC 1 cut(s) 1326
MboI GATC 3 cut(s) 604, 1142, 1525
MboII GAAGA 6 cut(s) 133, 485, 700, 1087, 1090, 1433
MfeI CAATTG 2 cut(s) 613, 1104
MhlI GDGCHC 5 cut(s) 9, 297, 427, 880, 1557
MlsI TGGCCA 2 cut(s) 71, 1652
MluCI AATT 9 cut(s) 95, 246, 299, 613, 952, 975, 1104, 1298, 1434
MluNI TGGCCA 2 cut(s) 71, 1652
MlyI GAGTC 3 cut(s) 446, 644, 1110
Mox20I TGGCCA 2 cut(s) 71, 1652
Mph1103I ATGCAT 2 cut(s) 580, 1617
MroXI GAANNNNTTC 1 cut(s) 1094
MscI TGGCCA 2 cut(s) 71, 1652
MseI TTAA 4 cut(s) 818, 978, 1515, 1729
MslI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1443, 1626
Msp20I TGGCCA 2 cut(s) 71, 1652
MspI CCGG 5 cut(s) 346, 654, 798, 825, 1256
MspR9I CCNGG 9 cut(s) 171, 182, 327, 359, 600, 798, 826, 1257, 1599
MunI CAATTG 2 cut(s) 613, 1104
MvaI CCWGG 6 cut(s) 171, 182, 327, 359, 600, 1599
MwoI GCNNNNNNNGC 6 cut(s) 53, 863, 884, 997, 1050, 1167
NciI CCSGG 3 cut(s) 798, 826, 1257
NcoI CCATGG 1 cut(s) 1653
NdeII GATC 3 cut(s) 604, 1142, 1525
NheI GCTAGC 1 cut(s) 1184
NlaIII CATG 8 cut(s) 95, 260, 402, 790, 1192, 1225, 1448, 1657
NlaIV GGNNCC 6 cut(s) 295, 796, 830, 1154, 1162, 1554
NmeAIII GCCGAG 1 cut(s) 6
NmuCI GTSAC 3 cut(s) 241, 1414, 1619
NsiI ATGCAT 2 cut(s) 580, 1617
NspI RCATGY 1 cut(s) 1225
PaqCI CACCTGC 1 cut(s) 1378
PciI ACATGT 1 cut(s) 1221
PdmI GAANNNNTTC 1 cut(s) 1094
PfoI TCCNGGA 1 cut(s) 1255
PinAI ACCGGT 1 cut(s) 345
PkrI GCNGC 7 cut(s) 559, 688, 859, 999, 1293, 1325, 1689
PleI GAGTC 3 cut(s) 446, 644, 1110
PpsI GAGTC 3 cut(s) 446, 644, 1110
PpuMI RGGWCCY 1 cut(s) 794
PscI ACATGT 1 cut(s) 1221
PshAI GACNNNNGTC 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 9
Psp5II RGGWCCY 1 cut(s) 794
Psp6I CCWGG 6 cut(s) 169, 180, 325, 357, 598, 1597
PspGI CCWGG 6 cut(s) 169, 180, 325, 357, 598, 1597
PspN4I GGNNCC 6 cut(s) 295, 796, 830, 1154, 1162, 1554
PspOMI GGGCCC 1 cut(s) 293
PspPI GGNCC 7 cut(s) 173, 293, 294, 361, 794, 829, 1160
PspPPI RGGWCCY 1 cut(s) 794
PstI CTGCAG 2 cut(s) 1692, 1714
RsaI GTAC 3 cut(s) 167, 373, 1632
RsaNI GTAC 3 cut(s) 166, 372, 1631
RseI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1443, 1626
SacI GAGCTC 1 cut(s) 9
SalI GTCGAC 1 cut(s) 61
SaqAI TTAA 4 cut(s) 818, 978, 1515, 1729
SatI GCNGC 7 cut(s) 558, 687, 858, 998, 1292, 1324, 1688
Sau3AI GATC 3 cut(s) 604, 1142, 1525
Sau96I GGNCC 7 cut(s) 173, 293, 294, 361, 794, 829, 1160
SchI GAGTC 3 cut(s) 446, 644, 1110
ScrFI CCNGG 9 cut(s) 171, 182, 327, 359, 600, 798, 826, 1257, 1599
SduI GDGCHC 5 cut(s) 9, 297, 427, 880, 1557
SexAI ACCWGGT 1 cut(s) 598
SfaNI GCATC 5 cut(s) 156, 565, 739, 1034, 1602
SfcI CTRYAG 2 cut(s) 1688, 1710
SinI GGWCC 3 cut(s) 173, 794, 829
SmiMI CAYNNNNRTG 5 cut(s) 90, 152, 255, 1443, 1626
SpeI ACTAGT 1 cut(s) 1268
Sse9I AATT 9 cut(s) 95, 246, 299, 613, 952, 975, 1104, 1298, 1434
SsiI CCGC 8 cut(s) 287, 687, 857, 1289, 1292, 1324, 1557, 1706
SspMI CTAG 6 cut(s) 791, 1056, 1146, 1185, 1269, 1380
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 9 cut(s) 169, 180, 325, 357, 598, 796, 824, 1255, 1597
StyI CCWWGG 3 cut(s) 66, 1156, 1653
TaaI ACNGT 9 cut(s) 154, 165, 355, 415, 593, 634, 736, 973, 1546
TaiI ACGT 2 cut(s) 243, 531
TaqI TCGA 6 cut(s) 62, 232, 844, 1065, 1083, 1141
TasI AATT 9 cut(s) 95, 246, 299, 613, 952, 975, 1104, 1298, 1434
TatI WGTACW 1 cut(s) 1630
TauI GCSGC 4 cut(s) 689, 860, 1294, 1326
Tru1I TTAA 4 cut(s) 818, 978, 1515, 1729
Tru9I TTAA 4 cut(s) 818, 978, 1515, 1729
TscAI CASTG 7 cut(s) 123, 157, 257, 880, 1027, 1186, 1315
TseFI GTSAC 3 cut(s) 241, 1414, 1619
TseI GCWGC 3 cut(s) 557, 997, 1687
Tsp45I GTSAC 3 cut(s) 241, 1414, 1619
TspDTI ATGAA 6 cut(s) 39, 108, 425, 1205, 1427, 1433
TspGWI ACGGA 3 cut(s) 703, 922, 926
TspRI CASTG 7 cut(s) 123, 157, 257, 880, 1027, 1186, 1315
VneI GTGCAC 1 cut(s) 876
VpaK11BI GGWCC 3 cut(s) 173, 794, 829
XagI CCTNNNNNAGG 1 cut(s) 1469
XapI RAATTY 3 cut(s) 95, 299, 1298
XbaI TCTAGA 2 cut(s) 1145, 1379
XceI RCATGY 1 cut(s) 1225
XcmI CCANNNNNNNNNTGG 2 cut(s) 1163, 1660
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 1 cut(s) 1094
XspI CTAG 6 cut(s) 791, 1056, 1146, 1185, 1269, 1380
Zsp2I ATGCAT 2 cut(s) 580, 1617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.