Rroxscaffold_4G00312320

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001265
Physical Location & Seq
Reverse (-)
35225343 .. 35227923
2581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00312320.1

Sequence Viewer

Length: 1479 bp
ATGAATTTGTTGCATGGTATTAGGCAAATGAGAACTGGATGGGCGGATGGGCCCGAATTTGTAACTCAATGCCCGATTAGGCCAGGAGGGAGTTACACCTACCGGTTCACAGTCCAGGGCCAAGAAGGTACTTTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCAAAACAAGGAGACTCGTATCCATTCCCTAAACCAAATCGTCAAGCAACACTTCTTCTCGGTGAGTGGTGGGACGCTAACCCTATTGACGTGGTGAGGAGGGCAACTCGCACAGGAGCAGCTCCGAATGTTTCTGATGCATACACCATCAACGGTCAACCTGGTGATCTTTACAATTGCTCCAGCAAAGGGACTGTCGTAGTTCCCATAGACTCCGGTGAGACCAACCTTTTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAACCACAAGCTGACTGTGGTCGGTGCTGATGCCTCCTACACCAAGACATTTTCCACCAAAGTTCTAATGCTAGGACCCGGCCAGACCACCGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCACGTGCCTACTTCAGTGCACAAAACGCTCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAATCCGTCCGTTGCAACACTACTAGTTGCAAAAAGGGTAAAAAACCCATAATGCCACAGCTGCCAGCTTTCAATGACACAAACACTGCATCTGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAGGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGTCTCGGACTCAACAAATGCCCTAAGCACTTTCAATCTAGAAGGTGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTCCCAGCCAACCCGCCACGGAAATTTGATTACACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCCGGAACAAAGGGATACAAGTTGAAGTACGGATCTAGAGTGCAGGTGGTGTTACAAGACACAAGTATTGTCACACCCGAGAACCATCCCATTCATCTCCACGGATATGATTTCTACATCCTTGCAGAGGGTTTTGGAAACTTCAATGCCAAGACTGATACTAAAAAGTTTAACCTTGTTGATCCACCTCTGAGGAACACTGTGTCGGTGCCCTCAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGGTGATGCATTGTCACTTGGATGTACATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAGACAATAAAGCCTCCGCCTGCAGATTTGCCTCTGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

492

Amino Acids

54.45

Weight (kDa)

9.23

Isoelectric Point (pI)

34.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 4 - 68 1.5e-23 Multicopper oxidase
Cu-oxidase PF00394 81 - 229 1.4e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 341 - 474 4.8e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1126
Acc36I ACCTGC 1 cut(s) 1126
AccB1I GGYRCC 2 cut(s) 900, 1300
AccBSI CCGCTC 1 cut(s) 1074
AccIII TCCGGA 1 cut(s) 1094
AciI CCGC 6 cut(s) 44, 444, 614, 1037, 1072, 1454
AclWI GGATC 2 cut(s) 1132, 1268
AcoI YGGCCR 2 cut(s) 556, 1398
AcsI RAATTY 3 cut(s) 4, 56, 1046
AcuI CTGAAG 2 cut(s) 613, 778
AcvI CACGTG 1 cut(s) 620
AfaI GTAC 3 cut(s) 130, 1121, 1380
AfiI CCNNNNNNNGG 5 cut(s) 203, 384, 1094, 1219, 1310
AflIII ACRYGT 1 cut(s) 969
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 5 cut(s) 680, 757, 890, 1117, 1237
AhlI ACTAGT 2 cut(s) 707, 1016
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 5 cut(s) 82, 114, 355, 1003, 1345
AluBI AGCT 9 cut(s) 153, 317, 487, 745, 752, 792, 986, 1337, 1435
AluI AGCT 9 cut(s) 153, 317, 487, 745, 752, 792, 986, 1337, 1435
Alw21I GWGCWC 2 cut(s) 184, 637
Alw26I GTCTC 4 cut(s) 201, 410, 863, 952
Alw44I GTGCAC 1 cut(s) 633
AlwI GGATC 2 cut(s) 1132, 1268
Ama87I CYCGRG 1 cut(s) 1169
Aor13HI TCCGGA 1 cut(s) 1094
AoxI GGCC 6 cut(s) 50, 80, 118, 556, 907, 1398
ApaI GGGCCC 1 cut(s) 54
ApaLI GTGCAC 1 cut(s) 633
ApeKI GCWGC 3 cut(s) 314, 745, 1435
ApoI RAATTY 3 cut(s) 4, 56, 1046
ArsI GACNNNNNNTTYG 6 cut(s) 375, 407, 409, 441, 956, 988
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 842
AspS9I GGNCC 7 cut(s) 50, 51, 118, 551, 586, 817, 908
AsuC2I CCSGG 2 cut(s) 555, 583
AsuHPI GGTGA 6 cut(s) 269, 301, 371, 425, 571, 1369
AsuNHI GCTAGC 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 1169
AvaII GGWCC 3 cut(s) 551, 586, 817
BaeGI GKGCMC 3 cut(s) 54, 637, 1305
BalI TGGCCA 1 cut(s) 1400
BanI GGYRCC 2 cut(s) 900, 1300
BanII GRGCYC 1 cut(s) 54
BbrPI CACGTG 1 cut(s) 620
Bbv12I GWGCWC 2 cut(s) 184, 637
BbvI GCAGC 3 cut(s) 326, 732, 1422
BccI CCATC 5 cut(s) 33, 41, 350, 604, 1185
BciT130I CCWGG 5 cut(s) 84, 116, 357, 1005, 1347
BciVI GTATCC 2 cut(s) 225, 1100
BcnI CCSGG 2 cut(s) 555, 583
BcoDI GTCTC 4 cut(s) 201, 410, 863, 952
BcuI ACTAGT 2 cut(s) 707, 1016
BfaI CTAG 7 cut(s) 548, 708, 804, 894, 933, 1017, 1128
BfmI CTRYAG 2 cut(s) 1436, 1458
BfuAI ACCTGC 1 cut(s) 1126
BfuI GTATCC 2 cut(s) 225, 1100
BglI GCCNNNNNGGC 1 cut(s) 915
BisI GCNGC 6 cut(s) 315, 444, 615, 746, 1072, 1436
BlsI GCNGC 6 cut(s) 316, 445, 616, 747, 1073, 1437
Bme1390I CCNGG 7 cut(s) 84, 116, 357, 555, 583, 1005, 1347
Bme18I GGWCC 3 cut(s) 551, 586, 817
BmeT110I CYCGRG 1 cut(s) 1169
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 7 cut(s) 50, 51, 118, 551, 586, 817, 908
BmiI GGNNCC 7 cut(s) 52, 553, 587, 819, 902, 910, 1302
BmrFI CCNGG 7 cut(s) 84, 116, 357, 555, 583, 1005, 1347
BmrI ACTGGG 3 cut(s) 1068, 1083, 1399
BmsI GCATC 4 cut(s) 322, 496, 782, 1350
BmtI GCTAGC 1 cut(s) 936
BmuI ACTGGG 3 cut(s) 1068, 1083, 1399
BoxI GACNNNNGTC 1 cut(s) 494
BplI GAGNNNNNCTC 2 cut(s) 286, 318
BpmI CTGGAG 2 cut(s) 361, 1026
Bpu10I CCTNAGC 1 cut(s) 879
BpuMI CCSGG 2 cut(s) 555, 583
BsaAI YACGTR 1 cut(s) 620
BsaI GGTCTC 2 cut(s) 410, 863
BsaJI CCNNGG 6 cut(s) 115, 582, 904, 1040, 1192, 1401
BsaWI WCCGGW 3 cut(s) 102, 410, 1094
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 5 cut(s) 203, 384, 1094, 1219, 1310
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 4 cut(s) 40, 1063, 1089, 1394
BseAI TCCGGA 1 cut(s) 1094
BseBI CCWGG 5 cut(s) 84, 116, 357, 1005, 1347
BseDI CCNNGG 6 cut(s) 115, 582, 904, 1040, 1192, 1401
BseGI GGATG 6 cut(s) 44, 52, 193, 1177, 1209, 1381
BseLI CCNNNNNNNGG 5 cut(s) 203, 384, 1094, 1219, 1310
BseMII CTCAG 1 cut(s) 1274
BseNI ACTGG 4 cut(s) 40, 1063, 1089, 1394
BseRI GAGGAG 1 cut(s) 307
BseSI GKGCMC 3 cut(s) 54, 637, 1305
BseXI GCAGC 3 cut(s) 326, 732, 1422
BseYI CCCAGC 1 cut(s) 1027
BsgI GTGCAG 1 cut(s) 1154
BshFI GGCC 6 cut(s) 52, 82, 120, 558, 909, 1400
BshNI GGYRCC 2 cut(s) 900, 1300
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 184, 637
BsiHKCI CYCGRG 1 cut(s) 1169
BsiSI CCGG 5 cut(s) 103, 411, 555, 582, 1095
BslFI GGGAC 4 cut(s) 281, 400, 599, 803
BslI CCNNNNNNNGG 5 cut(s) 203, 384, 1094, 1219, 1310
BsmAI GTCTC 4 cut(s) 201, 410, 863, 952
BsmFI GGGAC 4 cut(s) 281, 400, 599, 803
BsnI GGCC 6 cut(s) 52, 82, 120, 558, 909, 1400
Bso31I GGTCTC 2 cut(s) 410, 863
BsoBI CYCGRG 1 cut(s) 1169
Bsp120I GGGCCC 1 cut(s) 50
Bsp1286I GDGCHC 4 cut(s) 54, 184, 637, 1305
Bsp13I TCCGGA 1 cut(s) 1094
Bsp1407I TGTACA 1 cut(s) 1378
Bsp143I GATC 3 cut(s) 361, 1124, 1273
Bsp19I CCATGG 1 cut(s) 1401
BspACI CCGC 6 cut(s) 44, 444, 614, 1037, 1072, 1454
BspANI GGCC 6 cut(s) 52, 82, 120, 558, 909, 1400
BspCNI CTCAG 1 cut(s) 1275
BspEI TCCGGA 1 cut(s) 1094
BspLI GGNNCC 7 cut(s) 52, 553, 587, 819, 902, 910, 1302
BspMAI CTGCAG 2 cut(s) 1440, 1462
BspMI ACCTGC 1 cut(s) 1126
BspOI GCTAGC 1 cut(s) 936
BspPI GGATC 2 cut(s) 1132, 1268
BspT107I GGYRCC 2 cut(s) 900, 1300
BspTNI GGTCTC 2 cut(s) 410, 863
BsrBI CCGCTC 1 cut(s) 1074
BsrFI RCCGGY 1 cut(s) 102
BsrGI TGTACA 1 cut(s) 1378
BsrI ACTGG 4 cut(s) 40, 1063, 1089, 1394
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 6 cut(s) 115, 582, 904, 1040, 1192, 1401
BssMI GATC 3 cut(s) 361, 1124, 1273
BssT1I CCWWGG 2 cut(s) 904, 1401
Bst2UI CCWGG 5 cut(s) 84, 116, 357, 1005, 1347
Bst4CI ACNGT 6 cut(s) 112, 172, 350, 391, 493, 1294
Bst6I CTCTTC 1 cut(s) 848
BstAUI TGTACA 1 cut(s) 1378
BstBAI YACGTR 1 cut(s) 620
BstC8I GCNNGC 5 cut(s) 144, 750, 934, 1076, 1458
BstDEI CTNAG 4 cut(s) 161, 786, 879, 1283
BstDSI CCRYGG 3 cut(s) 1040, 1192, 1401
BstENI CCTNNNNNAGG 1 cut(s) 1217
BstF5I GGATG 6 cut(s) 44, 52, 193, 1177, 1209, 1381
BstKTI GATC 3 cut(s) 364, 1127, 1276
BstMAI GTCTC 4 cut(s) 201, 410, 863, 952
BstMBI GATC 3 cut(s) 361, 1124, 1273
BstMWI GCNNNNNNNGC 5 cut(s) 620, 641, 745, 798, 915
BstNI CCWGG 5 cut(s) 84, 116, 357, 1005, 1347
BstNSI RCATGY 1 cut(s) 973
BstPAI GACNNNNGTC 1 cut(s) 494
BstSCI CCNGG 7 cut(s) 82, 114, 355, 553, 581, 1003, 1345
BstSFI CTRYAG 2 cut(s) 1436, 1458
BstSLI GKGCMC 3 cut(s) 54, 637, 1305
BstV1I GCAGC 3 cut(s) 326, 732, 1422
BstX2I RGATCY 1 cut(s) 1124
BstXI CCANNNNNNTGG 1 cut(s) 1353
BstYI RGATCY 1 cut(s) 1124
BsuI GTATCC 2 cut(s) 225, 1100
BsuRI GGCC 6 cut(s) 52, 82, 120, 558, 909, 1400
BtgI CCRYGG 3 cut(s) 1040, 1192, 1401
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 6 cut(s) 44, 52, 193, 1177, 1209, 1381
BtsI GCAGTG 2 cut(s) 768, 927
BtsIMutI CAGTG 5 cut(s) 637, 768, 927, 1056, 1290
BveI ACCTGC 1 cut(s) 1126
Cac8I GCNNGC 5 cut(s) 144, 750, 934, 1076, 1458
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 7 cut(s) 50, 51, 118, 551, 586, 817, 908
CseI GACGC 1 cut(s) 278
CsiI ACCWGGT 1 cut(s) 355
Csp6I GTAC 3 cut(s) 129, 1120, 1379
CspAI ACCGGT 1 cut(s) 102
CviAII CATG 5 cut(s) 14, 156, 937, 970, 1402
CviQI GTAC 3 cut(s) 129, 1120, 1379
DdeI CTNAG 4 cut(s) 161, 786, 879, 1283
DpnI GATC 3 cut(s) 363, 1126, 1275
DpnII GATC 3 cut(s) 361, 1124, 1273
EaeI YGGCCR 2 cut(s) 556, 1398
Eam1104I CTCTTC 1 cut(s) 848
EarI CTCTTC 1 cut(s) 848
EciI GGCGGA 2 cut(s) 59, 1443
Eco130I CCWWGG 2 cut(s) 904, 1401
Eco24I GRGCYC 1 cut(s) 54
Eco31I GGTCTC 2 cut(s) 410, 863
Eco47I GGWCC 3 cut(s) 551, 586, 817
Eco57I CTGAAG 2 cut(s) 613, 778
Eco72I CACGTG 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 1169
EcoNI CCTNNNNNAGG 1 cut(s) 1217
EcoO109I RGGNCCY 3 cut(s) 551, 817, 908
EcoRII CCWGG 5 cut(s) 82, 114, 355, 1003, 1345
EcoT14I CCWWGG 2 cut(s) 904, 1401
EcoT22I ATGCAT 2 cut(s) 337, 1365
EcoT38I GRGCYC 1 cut(s) 54
ErhI CCWWGG 2 cut(s) 904, 1401
FaeI CATG 5 cut(s) 17, 159, 940, 973, 1405
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 4 cut(s) 281, 400, 599, 803
FatI CATG 5 cut(s) 13, 155, 936, 969, 1401
FauI CCCGC 1 cut(s) 1044
Fnu4HI GCNGC 6 cut(s) 315, 444, 615, 746, 1072, 1436
FokI GGATG 6 cut(s) 51, 59, 180, 1164, 1196, 1388
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 6 cut(s) 315, 444, 615, 746, 1072, 1436
FspBI CTAG 7 cut(s) 548, 708, 804, 894, 933, 1017, 1128
GluI GCNGC 6 cut(s) 315, 444, 615, 746, 1072, 1436
GsaI CCCAGC 1 cut(s) 1031
GsuI CTGGAG 2 cut(s) 361, 1026
HaeIII GGCC 6 cut(s) 52, 82, 120, 558, 909, 1400
HapII CCGG 5 cut(s) 103, 411, 555, 582, 1095
HgaI GACGC 1 cut(s) 278
Hin1II CATG 5 cut(s) 17, 159, 940, 973, 1405
HincII GTYRAC 1 cut(s) 353
HindII GTYRAC 1 cut(s) 353
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 3 cut(s) 209, 407, 864
HpaII CCGG 5 cut(s) 103, 411, 555, 582, 1095
HphI GGTGA 6 cut(s) 269, 301, 371, 425, 571, 1369
Hpy166II GTNNAC 5 cut(s) 108, 353, 635, 1012, 1417
Hpy188I TCNGA 6 cut(s) 321, 331, 797, 863, 1284, 1328
Hpy188III TCNNGA 5 cut(s) 600, 677, 894, 1095, 1128
Hpy8I GTNNAC 5 cut(s) 108, 353, 635, 1012, 1417
Hpy99I CGWCG 2 cut(s) 476, 836
HpyAV CCTTC 3 cut(s) 119, 790, 891
HpyCH4III ACNGT 6 cut(s) 112, 172, 350, 391, 493, 1294
HpyCH4IV ACGT 2 cut(s) 285, 619
HpyF10VI GCNNNNNNNGC 5 cut(s) 620, 641, 745, 798, 915
HpyF3I CTNAG 4 cut(s) 161, 786, 879, 1283
HpySE526I ACGT 2 cut(s) 285, 619
Hsp92II CATG 5 cut(s) 17, 159, 940, 973, 1405
Kpn2I TCCGGA 1 cut(s) 1094
Kzo9I GATC 3 cut(s) 361, 1124, 1273
LmnI GCTCC 6 cut(s) 179, 311, 322, 380, 649, 1432
Lsp1109I GCAGC 3 cut(s) 326, 732, 1422
LweI GCATC 4 cut(s) 322, 496, 782, 1350
MabI ACCWGGT 1 cut(s) 355
MaeI CTAG 7 cut(s) 548, 708, 804, 894, 933, 1017, 1128
MaeII ACGT 2 cut(s) 285, 619
MaeIII GTNAC 5 cut(s) 61, 92, 1143, 1162, 1367
MalI GATC 3 cut(s) 363, 1126, 1275
MbiI CCGCTC 1 cut(s) 1074
MboI GATC 3 cut(s) 361, 1124, 1273
MboII GAAGA 4 cut(s) 242, 457, 835, 838
MfeI CAATTG 1 cut(s) 370
MflI RGATCY 1 cut(s) 1124
MhlI GDGCHC 4 cut(s) 54, 184, 637, 1305
MlsI TGGCCA 1 cut(s) 1400
MluCI AATT 5 cut(s) 4, 56, 370, 975, 1046
MluNI TGGCCA 1 cut(s) 1400
MlyI GAGTC 3 cut(s) 203, 401, 858
Mox20I TGGCCA 1 cut(s) 1400
Mph1103I ATGCAT 2 cut(s) 337, 1365
MroI TCCGGA 1 cut(s) 1094
MroXI GAANNNNTTC 1 cut(s) 842
MscI TGGCCA 1 cut(s) 1400
MseI TTAA 3 cut(s) 575, 1263, 1477
MslI CAYNNNNRTG 2 cut(s) 1197, 1374
Msp20I TGGCCA 1 cut(s) 1400
MspA1I CMGCKG 1 cut(s) 745
MspI CCGG 5 cut(s) 103, 411, 555, 582, 1095
MspR9I CCNGG 7 cut(s) 84, 116, 357, 555, 583, 1005, 1347
MunI CAATTG 1 cut(s) 370
MvaI CCWGG 5 cut(s) 84, 116, 357, 1005, 1347
MwoI GCNNNNNNNGC 5 cut(s) 620, 641, 745, 798, 915
NciI CCSGG 2 cut(s) 555, 583
NcoI CCATGG 1 cut(s) 1401
NdeII GATC 3 cut(s) 361, 1124, 1273
NheI GCTAGC 1 cut(s) 932
NlaIII CATG 5 cut(s) 17, 159, 940, 973, 1405
NlaIV GGNNCC 7 cut(s) 52, 553, 587, 819, 902, 910, 1302
NmuCI GTSAC 2 cut(s) 1162, 1367
NsiI ATGCAT 2 cut(s) 337, 1365
NspI RCATGY 1 cut(s) 973
PaqCI CACCTGC 1 cut(s) 1126
PciI ACATGT 1 cut(s) 969
PdmI GAANNNNTTC 1 cut(s) 842
PfoI TCCNGGA 1 cut(s) 1003
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 6 cut(s) 316, 445, 616, 747, 1073, 1437
PleI GAGTC 3 cut(s) 203, 401, 858
PmaCI CACGTG 1 cut(s) 620
PmlI CACGTG 1 cut(s) 620
PpsI GAGTC 3 cut(s) 203, 401, 858
Ppu21I YACGTR 1 cut(s) 620
PpuMI RGGWCCY 2 cut(s) 551, 817
PscI ACATGT 1 cut(s) 969
PshAI GACNNNNGTC 1 cut(s) 494
Psp5II RGGWCCY 2 cut(s) 551, 817
Psp6I CCWGG 5 cut(s) 82, 114, 355, 1003, 1345
PspCI CACGTG 1 cut(s) 620
PspFI CCCAGC 1 cut(s) 1027
PspGI CCWGG 5 cut(s) 82, 114, 355, 1003, 1345
PspN4I GGNNCC 7 cut(s) 52, 553, 587, 819, 902, 910, 1302
PspOMI GGGCCC 1 cut(s) 50
PspPI GGNCC 7 cut(s) 50, 51, 118, 551, 586, 817, 908
PspPPI RGGWCCY 2 cut(s) 551, 817
PstI CTGCAG 2 cut(s) 1440, 1462
PsuI RGATCY 1 cut(s) 1124
PvuII CAGCTG 1 cut(s) 745
RsaI GTAC 3 cut(s) 130, 1121, 1380
RsaNI GTAC 3 cut(s) 129, 1120, 1379
RseI CAYNNNNRTG 2 cut(s) 1197, 1374
SaqAI TTAA 3 cut(s) 575, 1263, 1477
SatI GCNGC 6 cut(s) 315, 444, 615, 746, 1072, 1436
Sau3AI GATC 3 cut(s) 361, 1124, 1273
Sau96I GGNCC 7 cut(s) 50, 51, 118, 551, 586, 817, 908
SchI GAGTC 3 cut(s) 203, 401, 858
ScrFI CCNGG 7 cut(s) 84, 116, 357, 555, 583, 1005, 1347
SduI GDGCHC 4 cut(s) 54, 184, 637, 1305
SexAI ACCWGGT 1 cut(s) 355
SfaNI GCATC 4 cut(s) 322, 496, 782, 1350
SfcI CTRYAG 2 cut(s) 1436, 1458
SinI GGWCC 3 cut(s) 551, 586, 817
SmiMI CAYNNNNRTG 2 cut(s) 1197, 1374
SpeI ACTAGT 2 cut(s) 707, 1016
Sse9I AATT 5 cut(s) 4, 56, 370, 975, 1046
SsiI CCGC 6 cut(s) 44, 444, 614, 1037, 1072, 1454
SspMI CTAG 7 cut(s) 548, 708, 804, 894, 933, 1017, 1128
StyD4I CCNGG 7 cut(s) 82, 114, 355, 553, 581, 1003, 1345
StyI CCWWGG 2 cut(s) 904, 1401
TaaI ACNGT 6 cut(s) 112, 172, 350, 391, 493, 1294
TaiI ACGT 2 cut(s) 288, 622
TaqI TCGA 3 cut(s) 601, 813, 831
TaqII GACCGA 1 cut(s) 845
TasI AATT 5 cut(s) 4, 56, 370, 975, 1046
TatI WGTACW 1 cut(s) 1378
TauI GCSGC 3 cut(s) 446, 617, 1074
Tru1I TTAA 3 cut(s) 575, 1263, 1477
Tru9I TTAA 3 cut(s) 575, 1263, 1477
TscAI CASTG 5 cut(s) 637, 775, 934, 1063, 1297
TseFI GTSAC 2 cut(s) 1162, 1367
TseI GCWGC 3 cut(s) 314, 745, 1435
Tsp45I GTSAC 2 cut(s) 1162, 1367
TspDTI ATGAA 4 cut(s) 17, 182, 953, 1175
TspGWI ACGGA 6 cut(s) 460, 679, 683, 1057, 1137, 1209
TspRI CASTG 5 cut(s) 637, 775, 934, 1063, 1297
VneI GTGCAC 1 cut(s) 633
VpaK11BI GGWCC 3 cut(s) 551, 586, 817
XagI CCTNNNNNAGG 1 cut(s) 1217
XapI RAATTY 3 cut(s) 4, 56, 1046
XbaI TCTAGA 2 cut(s) 893, 1127
XceI RCATGY 1 cut(s) 973
XcmI CCANNNNNNNNNTGG 2 cut(s) 911, 1408
XmnI GAANNNNTTC 1 cut(s) 842
XspI CTAG 7 cut(s) 548, 708, 804, 894, 933, 1017, 1128
Zsp2I ATGCAT 2 cut(s) 337, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.