Rroxscaffold_4G00312750

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001265
Physical Location & Seq
Reverse (-)
35876217 .. 35878696
2480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00312750.1

Sequence Viewer

Length: 1491 bp
ATGAATTTGTTGCATGGCATTCGGCAAATGAGAACCGGATGGGCGGATGGGCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGCAGTTACACCTACCGGTTTACAATCCAAGGTCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCGAAACAAGGAGACTCGTATCCATTCACTAAACCGAATCGTCAAGCAACACTTCTTCTTGGTGAGTGGTGGGATGGTAACCCTATTGACGTGGTGAGGAGGGCGACTCGCACAGGAGCAGCTCCAAATGTTTCTAACGCATATACCATTAACGGTCAACCCGGAGATCTTTACAGTTGCTCCAGCAAAGGCACCGTCATAGTTCCAATAGACTCTGGTGAGACTAACCTACTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCATCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCCTCGTACACCAAGCCTTTCACCACCAAAATTCTCATGCTAGGCCCAGGCCAGACTACTGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCGAGTGCCTATTTCAGTGCACAAAATGCTGCATTTGACAACACCACCACCACAGCCATTCTTGAATATAAGTCCGTTCGTTGCAACGCAACTAGTTGCAACAAGGGTAAAACAATAATTAAACCCATAATGCCAAAGCTGCCAGCTTTCAATGACACGAACACTGCATCCGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGCCTCGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGATGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCACGGAAGTTTGATTACACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGGATACAAGTTGAAGTACGGGTCTAGGGTGCAGGTTGTGTTACAAGACACAAGTATTGTCACACCCGAGAACCATCCCATTCATCTCCATGGTTATGATTTCTACATCCTTGCAGAGGGTTTTGGAAATTTCAACCCCAAGACTGATACTAAAATGTTTAATCTTGTTGATCCACCTCTAAGGAACACGGTCGCAGTGCCCGTAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGATGATGCATTGTCACTTGGATGTTCATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAATCAATAGAGCCACCACCAGCGGATTATCCTCTGTGTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

496

Amino Acids

54.88

Weight (kDa)

9.1

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 4 - 68 2.5e-23 Multicopper oxidase
Cu-oxidase PF00394 81 - 229 3.8e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 344 - 477 2.8e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1135
AccB1I GGYRCC 1 cut(s) 386
AccBSI CCGCTC 1 cut(s) 1083
AciI CCGC 7 cut(s) 44, 444, 614, 786, 1046, 1081, 1469
AclWI GGATC 1 cut(s) 1277
AcoI YGGCCR 1 cut(s) 1407
AcsI RAATTY 3 cut(s) 4, 537, 1240
AcuI CTGAAG 1 cut(s) 787
AfaI GTAC 3 cut(s) 130, 515, 1130
AfiI CCNNNNNNNGG 4 cut(s) 203, 1103, 1228, 1319
AflIII ACRYGT 1 cut(s) 978
AgeI ACCGGT 1 cut(s) 102
AgsI TTSAA 4 cut(s) 680, 766, 1126, 1246
AhlI ACTAGT 2 cut(s) 707, 1025
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 4 cut(s) 82, 553, 1012, 1354
AloI GAACNNNNNNTCC 2 cut(s) 767, 799
AluBI AGCT 8 cut(s) 153, 317, 754, 761, 801, 995, 1346, 1444
AluI AGCT 8 cut(s) 153, 317, 754, 761, 801, 995, 1346, 1444
Alw21I GWGCWC 2 cut(s) 184, 637
Alw26I GTCTC 3 cut(s) 201, 410, 961
Alw44I GTGCAC 1 cut(s) 633
AlwI GGATC 1 cut(s) 1277
Ama87I CYCGRG 2 cut(s) 53, 1178
AoxI GGCC 6 cut(s) 50, 550, 556, 865, 916, 1407
ApaI GGGCCC 1 cut(s) 54
ApaLI GTGCAC 1 cut(s) 633
ApeKI GCWGC 4 cut(s) 314, 644, 754, 1444
ApoI RAATTY 3 cut(s) 4, 537, 1240
ArsI GACNNNNNNTTYG 4 cut(s) 375, 407, 965, 997
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 851
AspS9I GGNCC 5 cut(s) 50, 51, 551, 586, 917
AsuC2I CCSGG 2 cut(s) 357, 583
AsuHPI GGTGA 5 cut(s) 269, 301, 425, 520, 571
AsuNHI GCTAGC 1 cut(s) 941
AvaI CYCGRG 2 cut(s) 53, 1178
AvaII GGWCC 1 cut(s) 586
BaeGI GKGCMC 3 cut(s) 54, 637, 1314
BalI TGGCCA 1 cut(s) 1409
BanI GGYRCC 1 cut(s) 386
BanII GRGCYC 1 cut(s) 54
BarI GAAGNNNNNNTAC 2 cut(s) 1046, 1078
Bbv12I GWGCWC 2 cut(s) 184, 637
BbvI GCAGC 4 cut(s) 326, 631, 741, 1431
BccI CCATC 6 cut(s) 33, 41, 263, 479, 604, 1194
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 4 cut(s) 84, 555, 1014, 1356
BciVI GTATCC 2 cut(s) 225, 1109
BcnI CCSGG 2 cut(s) 357, 583
BcoDI GTCTC 3 cut(s) 201, 410, 961
BcuI ACTAGT 2 cut(s) 707, 1025
BfaI CTAG 7 cut(s) 548, 708, 813, 903, 942, 1026, 1137
BfuAI ACCTGC 1 cut(s) 1135
BfuI GTATCC 2 cut(s) 225, 1109
BglI GCCNNNNNGGC 1 cut(s) 924
BglII AGATCT 1 cut(s) 361
BisI GCNGC 7 cut(s) 315, 444, 615, 645, 755, 1081, 1445
BlsI GCNGC 7 cut(s) 316, 445, 616, 646, 756, 1082, 1446
Bme1390I CCNGG 6 cut(s) 84, 357, 555, 583, 1014, 1356
Bme18I GGWCC 1 cut(s) 586
BmeT110I CYCGRG 2 cut(s) 53, 1178
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 5 cut(s) 50, 51, 551, 586, 917
BmiI GGNNCC 4 cut(s) 52, 388, 587, 919
BmrFI CCNGG 6 cut(s) 84, 357, 555, 583, 1014, 1356
BmrI ACTGGG 3 cut(s) 1077, 1092, 1408
BmsI GCATC 4 cut(s) 496, 791, 899, 1359
BmtI GCTAGC 1 cut(s) 945
BmuI ACTGGG 3 cut(s) 1077, 1092, 1408
BplI GAGNNNNNCTC 2 cut(s) 286, 318
BpmI CTGGAG 2 cut(s) 361, 1035
Bpu10I CCTNAGC 1 cut(s) 888
BpuMI CCSGG 2 cut(s) 357, 583
BsaJI CCNNGG 8 cut(s) 115, 553, 582, 868, 913, 1049, 1201, 1410
BsaWI WCCGGW 2 cut(s) 35, 102
BsaXI ACNNNNNCTCC 2 cut(s) 359, 389
Bsc4I CCNNNNNNNGG 4 cut(s) 203, 1103, 1228, 1319
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 3 cut(s) 1072, 1098, 1403
BseBI CCWGG 4 cut(s) 84, 555, 1014, 1356
BseDI CCNNGG 8 cut(s) 115, 553, 582, 868, 913, 1049, 1201, 1410
BseGI GGATG 9 cut(s) 44, 52, 193, 274, 782, 1186, 1218, 1371, 1390
BseLI CCNNNNNNNGG 4 cut(s) 203, 1103, 1228, 1319
BseMII CTCAG 1 cut(s) 419
BseNI ACTGG 3 cut(s) 1072, 1098, 1403
BseRI GAGGAG 1 cut(s) 307
BseSI GKGCMC 3 cut(s) 54, 637, 1314
BseXI GCAGC 4 cut(s) 326, 631, 741, 1431
BsgI GTGCAG 1 cut(s) 1163
Bsh1285I CGRYCG 1 cut(s) 1305
BshFI GGCC 6 cut(s) 52, 552, 558, 867, 918, 1409
BshNI GGYRCC 1 cut(s) 386
BshTI ACCGGT 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 1305
BsiHKAI GWGCWC 2 cut(s) 184, 637
BsiHKCI CYCGRG 2 cut(s) 53, 1178
BsiSI CCGG 4 cut(s) 36, 103, 357, 582
BslFI GGGAC 2 cut(s) 599, 812
BslI CCNNNNNNNGG 4 cut(s) 203, 1103, 1228, 1319
BsmAI GTCTC 3 cut(s) 201, 410, 961
BsmFI GGGAC 2 cut(s) 599, 812
BsmI GAATGC 1 cut(s) 18
BsnI GGCC 6 cut(s) 52, 552, 558, 867, 918, 1409
BsoBI CYCGRG 2 cut(s) 53, 1178
Bsp120I GGGCCC 1 cut(s) 50
Bsp1286I GDGCHC 4 cut(s) 54, 184, 637, 1314
Bsp143I GATC 3 cut(s) 361, 899, 1282
Bsp19I CCATGG 2 cut(s) 1201, 1410
BspACI CCGC 7 cut(s) 44, 444, 614, 786, 1046, 1081, 1469
BspANI GGCC 6 cut(s) 52, 552, 558, 867, 918, 1409
BspCNI CTCAG 1 cut(s) 420
BspLI GGNNCC 4 cut(s) 52, 388, 587, 919
BspMI ACCTGC 1 cut(s) 1135
BspOI GCTAGC 1 cut(s) 945
BspPI GGATC 1 cut(s) 1277
BspT107I GGYRCC 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 1083
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 3 cut(s) 1072, 1098, 1403
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 8 cut(s) 115, 553, 582, 868, 913, 1049, 1201, 1410
BssMI GATC 3 cut(s) 361, 899, 1282
BssT1I CCWWGG 4 cut(s) 115, 913, 1201, 1410
Bst2UI CCWGG 4 cut(s) 84, 555, 1014, 1356
Bst4CI ACNGT 6 cut(s) 172, 350, 371, 391, 493, 1303
Bst6I CTCTTC 1 cut(s) 857
BstAPI GCANNNNNTGC 1 cut(s) 641
BstC8I GCNNGC 4 cut(s) 144, 759, 943, 1085
BstDEI CTNAG 5 cut(s) 161, 428, 795, 888, 1292
BstDSI CCRYGG 3 cut(s) 1049, 1201, 1410
BstEII GGTNACC 1 cut(s) 272
BstENI CCTNNNNNAGG 1 cut(s) 1226
BstF5I GGATG 9 cut(s) 44, 52, 193, 274, 782, 1186, 1218, 1371, 1390
BstKTI GATC 3 cut(s) 364, 902, 1285
BstMAI GTCTC 3 cut(s) 201, 410, 961
BstMBI GATC 3 cut(s) 361, 899, 1282
BstMCI CGRYCG 1 cut(s) 1305
BstMWI GCNNNNNNNGC 5 cut(s) 620, 641, 754, 807, 924
BstNI CCWGG 4 cut(s) 84, 555, 1014, 1356
BstNSI RCATGY 1 cut(s) 982
BstPI GGTNACC 1 cut(s) 272
BstSCI CCNGG 6 cut(s) 82, 355, 553, 581, 1012, 1354
BstSLI GKGCMC 3 cut(s) 54, 637, 1314
BstV1I GCAGC 4 cut(s) 326, 631, 741, 1431
BstX2I RGATCY 1 cut(s) 361
BstXI CCANNNNNNTGG 1 cut(s) 1362
BstYI RGATCY 1 cut(s) 361
BsuI GTATCC 2 cut(s) 225, 1109
BsuRI GGCC 6 cut(s) 52, 552, 558, 867, 918, 1409
BtgI CCRYGG 3 cut(s) 1049, 1201, 1410
BtgZI GCGATG 1 cut(s) 457
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 9 cut(s) 44, 52, 193, 274, 782, 1186, 1218, 1371, 1390
BtsI GCAGTG 3 cut(s) 777, 936, 1314
BtsIMutI CAGTG 5 cut(s) 637, 777, 936, 1065, 1314
BveI ACCTGC 1 cut(s) 1135
Cac8I GCNNGC 4 cut(s) 144, 759, 943, 1085
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 5 cut(s) 50, 51, 551, 586, 917
Csp6I GTAC 3 cut(s) 129, 514, 1129
CspAI ACCGGT 1 cut(s) 102
CviAII CATG 7 cut(s) 14, 156, 544, 946, 979, 1202, 1411
CviQI GTAC 3 cut(s) 129, 514, 1129
DdeI CTNAG 5 cut(s) 161, 428, 795, 888, 1292
DpnI GATC 3 cut(s) 363, 901, 1284
DpnII GATC 3 cut(s) 361, 899, 1282
EaeI YGGCCR 1 cut(s) 1407
Eam1104I CTCTTC 1 cut(s) 857
EarI CTCTTC 1 cut(s) 857
EciI GGCGGA 2 cut(s) 59, 775
Eco130I CCWWGG 4 cut(s) 115, 913, 1201, 1410
Eco24I GRGCYC 1 cut(s) 54
Eco47I GGWCC 1 cut(s) 586
Eco57I CTGAAG 1 cut(s) 787
Eco88I CYCGRG 2 cut(s) 53, 1178
Eco91I GGTNACC 1 cut(s) 272
EcoNI CCTNNNNNAGG 1 cut(s) 1226
EcoO109I RGGNCCY 1 cut(s) 917
EcoO65I GGTNACC 1 cut(s) 272
EcoRII CCWGG 4 cut(s) 82, 553, 1012, 1354
EcoT14I CCWWGG 4 cut(s) 115, 913, 1201, 1410
EcoT22I ATGCAT 1 cut(s) 1374
EcoT38I GRGCYC 1 cut(s) 54
ErhI CCWWGG 4 cut(s) 115, 913, 1201, 1410
FaeI CATG 7 cut(s) 17, 159, 547, 949, 982, 1205, 1414
FalI AAGNNNNNCTT 2 cut(s) 231, 263
FaqI GGGAC 2 cut(s) 599, 812
FatI CATG 7 cut(s) 13, 155, 543, 945, 978, 1201, 1410
FauI CCCGC 1 cut(s) 1053
Fnu4HI GCNGC 7 cut(s) 315, 444, 615, 645, 755, 1081, 1445
FokI GGATG 9 cut(s) 51, 59, 180, 281, 769, 1173, 1205, 1378, 1397
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 7 cut(s) 315, 444, 615, 645, 755, 1081, 1445
FspBI CTAG 7 cut(s) 548, 708, 813, 903, 942, 1026, 1137
GluI GCNGC 7 cut(s) 315, 444, 615, 645, 755, 1081, 1445
GsuI CTGGAG 2 cut(s) 361, 1035
HaeIII GGCC 6 cut(s) 52, 552, 558, 867, 918, 1409
HapII CCGG 4 cut(s) 36, 103, 357, 582
Hin1II CATG 7 cut(s) 17, 159, 547, 949, 982, 1205, 1414
HincII GTYRAC 1 cut(s) 353
HindII GTYRAC 1 cut(s) 353
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 5 cut(s) 209, 232, 301, 407, 873
HpaII CCGG 4 cut(s) 36, 103, 357, 582
HphI GGTGA 5 cut(s) 269, 301, 425, 520, 571
Hpy166II GTNNAC 6 cut(s) 108, 353, 516, 635, 1021, 1426
Hpy188I TCNGA 4 cut(s) 198, 806, 872, 1337
Hpy188III TCNNGA 5 cut(s) 122, 600, 677, 903, 1104
Hpy8I GTNNAC 6 cut(s) 108, 353, 516, 635, 1021, 1426
Hpy99I CGWCG 1 cut(s) 845
HpyAV CCTTC 2 cut(s) 119, 799
HpyCH4III ACNGT 6 cut(s) 172, 350, 371, 391, 493, 1303
HpyCH4IV ACGT 1 cut(s) 285
HpyF10VI GCNNNNNNNGC 5 cut(s) 620, 641, 754, 807, 924
HpyF3I CTNAG 5 cut(s) 161, 428, 795, 888, 1292
HpySE526I ACGT 1 cut(s) 285
Hsp92II CATG 7 cut(s) 17, 159, 547, 949, 982, 1205, 1414
Kzo9I GATC 3 cut(s) 361, 899, 1282
LmnI GCTCC 5 cut(s) 179, 311, 322, 380, 1441
Lsp1109I GCAGC 4 cut(s) 326, 631, 741, 1431
LweI GCATC 4 cut(s) 496, 791, 899, 1359
MaeI CTAG 7 cut(s) 548, 708, 813, 903, 942, 1026, 1137
MaeII ACGT 1 cut(s) 285
MaeIII GTNAC 6 cut(s) 61, 92, 272, 1152, 1171, 1376
MalI GATC 3 cut(s) 363, 901, 1284
MbiI CCGCTC 1 cut(s) 1083
MboI GATC 3 cut(s) 361, 899, 1282
MboII GAAGA 5 cut(s) 242, 457, 844, 847, 918
MflI RGATCY 1 cut(s) 361
MhlI GDGCHC 4 cut(s) 54, 184, 637, 1314
MlsI TGGCCA 1 cut(s) 1409
MluCI AATT 5 cut(s) 4, 537, 732, 984, 1240
MluNI TGGCCA 1 cut(s) 1409
MlyI GAGTC 4 cut(s) 203, 295, 401, 867
Mox20I TGGCCA 1 cut(s) 1409
Mph1103I ATGCAT 1 cut(s) 1374
MroXI GAANNNNTTC 1 cut(s) 851
MscI TGGCCA 1 cut(s) 1409
MseI TTAA 5 cut(s) 345, 575, 735, 1272, 1489
MslI CAYNNNNRTG 3 cut(s) 1200, 1206, 1383
Msp20I TGGCCA 1 cut(s) 1409
MspA1I CMGCKG 1 cut(s) 1469
MspI CCGG 4 cut(s) 36, 103, 357, 582
MspR9I CCNGG 6 cut(s) 84, 357, 555, 583, 1014, 1356
Mva1269I GAATGC 1 cut(s) 18
MvaI CCWGG 4 cut(s) 84, 555, 1014, 1356
MwoI GCNNNNNNNGC 5 cut(s) 620, 641, 754, 807, 924
NciI CCSGG 2 cut(s) 357, 583
NcoI CCATGG 2 cut(s) 1201, 1410
NdeII GATC 3 cut(s) 361, 899, 1282
NheI GCTAGC 1 cut(s) 941
NlaIII CATG 7 cut(s) 17, 159, 547, 949, 982, 1205, 1414
NlaIV GGNNCC 4 cut(s) 52, 388, 587, 919
NmuCI GTSAC 2 cut(s) 1171, 1376
NsiI ATGCAT 1 cut(s) 1374
NspI RCATGY 1 cut(s) 982
PciI ACATGT 1 cut(s) 978
PcsI WCGNNNNNNNCGW 1 cut(s) 1311
PctI GAATGC 1 cut(s) 18
PdmI GAANNNNTTC 1 cut(s) 851
PfeI GAWTC 1 cut(s) 232
PfoI TCCNGGA 1 cut(s) 1012
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 7 cut(s) 316, 445, 616, 646, 756, 1082, 1446
PleI GAGTC 4 cut(s) 203, 295, 401, 867
PpsI GAGTC 4 cut(s) 203, 295, 401, 867
PscI ACATGT 1 cut(s) 978
Psp6I CCWGG 4 cut(s) 82, 553, 1012, 1354
PspEI GGTNACC 1 cut(s) 272
PspGI CCWGG 4 cut(s) 82, 553, 1012, 1354
PspN4I GGNNCC 4 cut(s) 52, 388, 587, 919
PspOMI GGGCCC 1 cut(s) 50
PspPI GGNCC 5 cut(s) 50, 51, 551, 586, 917
PsuI RGATCY 1 cut(s) 361
RsaI GTAC 3 cut(s) 130, 515, 1130
RsaNI GTAC 3 cut(s) 129, 514, 1129
RseI CAYNNNNRTG 3 cut(s) 1200, 1206, 1383
SaqAI TTAA 5 cut(s) 345, 575, 735, 1272, 1489
SatI GCNGC 7 cut(s) 315, 444, 615, 645, 755, 1081, 1445
Sau3AI GATC 3 cut(s) 361, 899, 1282
Sau96I GGNCC 5 cut(s) 50, 51, 551, 586, 917
SchI GAGTC 4 cut(s) 203, 295, 401, 867
ScrFI CCNGG 6 cut(s) 84, 357, 555, 583, 1014, 1356
SduI GDGCHC 4 cut(s) 54, 184, 637, 1314
SfaNI GCATC 4 cut(s) 496, 791, 899, 1359
SinI GGWCC 1 cut(s) 586
SmiMI CAYNNNNRTG 3 cut(s) 1200, 1206, 1383
SpeI ACTAGT 2 cut(s) 707, 1025
Sse9I AATT 5 cut(s) 4, 537, 732, 984, 1240
SsiI CCGC 7 cut(s) 44, 444, 614, 786, 1046, 1081, 1469
SspMI CTAG 7 cut(s) 548, 708, 813, 903, 942, 1026, 1137
StyD4I CCNGG 6 cut(s) 82, 355, 553, 581, 1012, 1354
StyI CCWWGG 4 cut(s) 115, 913, 1201, 1410
TaaI ACNGT 6 cut(s) 172, 350, 371, 391, 493, 1303
TaiI ACGT 1 cut(s) 288
TaqI TCGA 4 cut(s) 601, 822, 840, 898
TasI AATT 5 cut(s) 4, 537, 732, 984, 1240
TauI GCSGC 3 cut(s) 446, 617, 1083
TfiI GAWTC 1 cut(s) 232
Tru1I TTAA 5 cut(s) 345, 575, 735, 1272, 1489
Tru9I TTAA 5 cut(s) 345, 575, 735, 1272, 1489
TscAI CASTG 5 cut(s) 637, 784, 943, 1072, 1314
TseFI GTSAC 2 cut(s) 1171, 1376
TseI GCWGC 4 cut(s) 314, 644, 754, 1444
Tsp45I GTSAC 2 cut(s) 1171, 1376
TspDTI ATGAA 5 cut(s) 17, 182, 962, 1184, 1379
TspGWI ACGGA 2 cut(s) 679, 1066
TspRI CASTG 5 cut(s) 637, 784, 943, 1072, 1314
VneI GTGCAC 1 cut(s) 633
VpaK11BI GGWCC 1 cut(s) 586
XagI CCTNNNNNAGG 1 cut(s) 1226
XapI RAATTY 3 cut(s) 4, 537, 1240
XbaI TCTAGA 1 cut(s) 902
XceI RCATGY 1 cut(s) 982
XcmI CCANNNNNNNNNTGG 2 cut(s) 920, 1417
XmnI GAANNNNTTC 1 cut(s) 851
XspI CTAG 7 cut(s) 548, 708, 813, 903, 942, 1026, 1137
Zsp2I ATGCAT 1 cut(s) 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.