RLG00000026977

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001265
Physical Location & Seq
Forward (+)
7401413 .. 7404027
2615 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026977

Sequence Viewer

Length: 1611 bp
ATGGAAGTACTCAACAGCTCCATTTTCCTTTTAGGCCTTTGCCTCCTCTTGGCTTCATCGACAATATCATCGGCAGAACCCAAAACCCACAACCATGAATTTGTTATTCAAGCAACACCAGTGAAGAGGCTGTGCAAAACTCAGAATAGCATCACCGTGAACGGACAGTTACCCGGACCAACCTTGGAAGTTAACAATGGCGACACTCTAGTCATCAAGGTCACGAACAAAGCTCGATACAACGTGACTATTCACTGGCATGGAATTCGCCAAATGAGAACTGGATGGGCTGATGGGCCAGAATTTGTAACTCAGTGCCCGATTAGGCCCGGAGGAAGCTACACTTACCGGTTTACAATCCAAGGTCAAGAAGGTACACTCTGGTGGCACGCTCACAGCTCTTGGCTTAGAGCCACTGTTTATGGAGCACTTATTATTCATCCTAAACAAGGAGACTCGTATCCATTCCCTAAACCAAAGCGCGAGACAACACTTCTTCTCGGTGAGTGGTGGGATGCAAACCCCATCGACGTGGTGAGGGAAGCAGACAGAACCGGAGCAGCTCCAAATGTTTCTGATGCTTACACAATCAATGGTCAACCGGGTGATCTTTACAAGTGCTCGAGCAATGACACAGTGATAGTTCCCATAGACTCCGGCGAAACCAACCTCCTCCGAGTCATCAACGCCGCTCTTAACCAACAACTTTTCTTCACCGTCGCCAACCATAAACTCACCGTTGTCGGTGCCGACGCCTCCTACACCAAGCCCTTCACCACCACTACCCTCATGCTAGGCCCCGGGCAGACCACCGACGTTTTAATCACCGGCGACCAGCCACCTTCTCGGTACTACATGGCAGCGCGTGCCTATTTCAGCGCACAAAATGCAGCATTCGACAACACCACCACCACCGCCATTCTCGAATACAAGTCTGCTCCATGCAGCAACTGCAAAAACGGCCCATCAACTAAGCCCGTCATGCCCCCACTCCCTGCTTACAACGACACCAACACCGCCTCCGCCTTCACCACCAGCTTCCGAAGCCCTAGAAAGGTCGAAGTCCCCACCGAAATCGACGAGAACCTCTTCTTCACAGTCGGCCTCGGACTCAACAACTGCCCCAAAAATTTCCCCTCCAGTAGGTGCCAAGGCCCTAACGGCACGCGCTTCACCGCCAGCATGAACAATGTCTCTTTTGTGCTACCAAACAACATCTCCGTCCTTCAAGCTTACCAGCAGAATATCCCCGGAGTTGTCACTTCTGATTTCCCGGCAAACCCACCACTGCAGTTTGACTACACCGGCAACGTGAGCCAATCACTCTGGCAGCCCAACTCCGGGACCAAGGGATACCCATTGAAATACGGATCAAGAGTCCAGGTGGTGTTGCAAGACACTAGTATTGTCACACCCGAAAACCACCCGATTCATCTCCACGGATACGATTTCTACATCCTTGCGGAAGGGTTTGGTAATTTCAATGCCAAGACTGACACTAAAAAATTCAACCTGGTTGATCCTCCTATGAGGAACACAGTTGCGGTACCAGTGAATGGTTGGGCTGTCATCAGATTTGTGGCTGACAATCCAGGTAACGATGAGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

537

Amino Acids

58.9

Weight (kDa)

7.61

Isoelectric Point (pI)

30.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 36 - 150 3.8e-45 Multicopper oxidase
Cu-oxidase PF00394 162 - 312 3.6e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 423 - 532 1.3e-28 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
Acc65I GGTACC 1 cut(s) 1546
AccB1I GGYRCC 3 cut(s) 746, 1146, 1546
AccB7I CCANNNNNTGG 1 cut(s) 1556
AccBSI CCGCTC 1 cut(s) 692
AccII CGCG 3 cut(s) 483, 865, 1168
AciI CCGC 7 cut(s) 690, 915, 1017, 1023, 1176, 1463, 1544
AclWI GGATC 2 cut(s) 1378, 1514
AcsI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
AcyI GRCGYC 1 cut(s) 753
AfaI GTAC 4 cut(s) 9, 376, 851, 1548
AfiI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
AgeI ACCGGT 1 cut(s) 348
AgsI TTSAA 5 cut(s) 110, 1229, 1363, 1483, 1510
AhlI ACTAGT 1 cut(s) 1400
AjiI CACGTC 1 cut(s) 532
AjnI CCWGG 3 cut(s) 1380, 1512, 1591
AleI CACNNNNGTG 1 cut(s) 382
AluBI AGCT 7 cut(s) 18, 233, 339, 399, 563, 1038, 1232
AluI AGCT 7 cut(s) 18, 233, 339, 399, 563, 1038, 1232
Alw21I GWGCWC 2 cut(s) 430, 623
Alw26I GTCTC 3 cut(s) 447, 479, 1198
AlwI GGATC 2 cut(s) 1378, 1514
AlwNI CAGNNNCTG 1 cut(s) 951
Ama87I CYCGRG 2 cut(s) 622, 800
AoxI GGCC 7 cut(s) 34, 296, 326, 796, 961, 1102, 1153
ApeKI GCWGC 5 cut(s) 560, 860, 890, 945, 1330
ApoI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
AsiGI ACCGGT 1 cut(s) 348
Asp700I GAANNNNTTC 1 cut(s) 1088
Asp718I GGTACC 1 cut(s) 1546
AspLEI GCGC 4 cut(s) 483, 865, 881, 1170
AspS9I GGNCC 7 cut(s) 176, 296, 327, 797, 962, 1154, 1344
AsuC2I CCSGG 8 cut(s) 174, 330, 603, 801, 802, 1251, 1274, 1342
AvaI CYCGRG 2 cut(s) 622, 800
AvaII GGWCC 2 cut(s) 176, 1344
BaeGI GKGCMC 1 cut(s) 320
BanI GGYRCC 3 cut(s) 746, 1146, 1546
Bbv12I GWGCWC 2 cut(s) 430, 623
BbvI GCAGC 5 cut(s) 572, 872, 902, 957, 1342
BccI CCATC 4 cut(s) 279, 287, 533, 973
BceAI ACGGC 2 cut(s) 976, 1177
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BciT130I CCWGG 3 cut(s) 1382, 1514, 1593
BciVI GTATCC 3 cut(s) 471, 1346, 1436
BcnI CCSGG 8 cut(s) 174, 330, 603, 801, 802, 1251, 1274, 1342
BcoDI GTCTC 3 cut(s) 447, 479, 1198
BcuI ACTAGT 1 cut(s) 1400
BfaI CTAG 4 cut(s) 209, 794, 1050, 1401
BfmI CTRYAG 1 cut(s) 1289
BfuI GTATCC 3 cut(s) 471, 1346, 1436
BglI GCCNNNNNGGC 1 cut(s) 1161
BisI GCNGC 6 cut(s) 561, 690, 861, 891, 946, 1331
BlsI GCNGC 6 cut(s) 562, 691, 862, 892, 947, 1332
BmcAI AGTACT 1 cut(s) 9
Bme18I GGWCC 2 cut(s) 176, 1344
BmeT110I CYCGRG 2 cut(s) 622, 800
BmgBI CACGTC 1 cut(s) 532
BmgT120I GGNCC 7 cut(s) 176, 296, 327, 797, 962, 1154, 1344
BmiI GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
BmsI GCATC 3 cut(s) 159, 505, 568
BpmI CTGGAG 1 cut(s) 1123
BpuMI CCSGG 8 cut(s) 174, 330, 603, 801, 802, 1251, 1274, 1342
BsaHI GRCGYC 1 cut(s) 753
BsaJI CCNNGG 9 cut(s) 183, 361, 799, 800, 1105, 1150, 1249, 1347, 1438
BsaWI WCCGGW 2 cut(s) 348, 554
BsaXI ACNNNNNCTCC 4 cut(s) 1004, 1034, 1202, 1232
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
Bse118I RCCGGY 3 cut(s) 348, 827, 1304
Bse1I ACTGG 5 cut(s) 119, 260, 286, 1140, 1550
Bse3DI GCAATG 1 cut(s) 634
BseBI CCWGG 3 cut(s) 1382, 1514, 1593
BseDI CCNNGG 9 cut(s) 183, 361, 799, 800, 1105, 1150, 1249, 1347, 1438
BseGI GGATG 4 cut(s) 290, 439, 520, 1455
BseLI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
BseMI GCAATG 1 cut(s) 634
BseMII CTCAG 2 cut(s) 155, 326
BseNI ACTGG 5 cut(s) 119, 260, 286, 1140, 1550
BseRI GAGGAG 2 cut(s) 35, 662
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 5 cut(s) 572, 872, 902, 957, 1342
Bsh1236I CGCG 3 cut(s) 483, 865, 1168
BshFI GGCC 7 cut(s) 36, 298, 328, 798, 963, 1104, 1155
BshNI GGYRCC 3 cut(s) 746, 1146, 1546
BshTI ACCGGT 1 cut(s) 348
BsiHKAI GWGCWC 2 cut(s) 430, 623
BsiHKCI CYCGRG 2 cut(s) 622, 800
BslFI GGGAC 2 cut(s) 1049, 1357
BslI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
BsmAI GTCTC 3 cut(s) 447, 479, 1198
BsmFI GGGAC 2 cut(s) 1049, 1357
BsmI GAATGC 1 cut(s) 893
BsnI GGCC 7 cut(s) 36, 298, 328, 798, 963, 1104, 1155
BsoBI CYCGRG 2 cut(s) 622, 800
Bsp1286I GDGCHC 3 cut(s) 320, 430, 623
Bsp143I GATC 3 cut(s) 607, 1370, 1519
BspACI CCGC 7 cut(s) 690, 915, 1017, 1023, 1176, 1463, 1544
BspANI GGCC 7 cut(s) 36, 298, 328, 798, 963, 1104, 1155
BspCNI CTCAG 2 cut(s) 154, 325
BspFNI CGCG 3 cut(s) 483, 865, 1168
BspLI GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
BspMAI CTGCAG 1 cut(s) 1293
BspPI GGATC 2 cut(s) 1378, 1514
BspT107I GGYRCC 3 cut(s) 746, 1146, 1546
BsrBI CCGCTC 1 cut(s) 692
BsrDI GCAATG 1 cut(s) 634
BsrFI RCCGGY 3 cut(s) 348, 827, 1304
BsrI ACTGG 5 cut(s) 119, 260, 286, 1140, 1550
BssAI RCCGGY 3 cut(s) 348, 827, 1304
BssECI CCNNGG 9 cut(s) 183, 361, 799, 800, 1105, 1150, 1249, 1347, 1438
BssMI GATC 3 cut(s) 607, 1370, 1519
BssNI GRCGYC 1 cut(s) 753
BssT1I CCWWGG 4 cut(s) 183, 361, 1150, 1347
Bst2UI CCWGG 3 cut(s) 1382, 1514, 1593
Bst4CI ACNGT 8 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540
Bst6I CTCTTC 2 cut(s) 119, 1094
BstACI GRCGYC 1 cut(s) 753
BstAPI GCANNNNNTGC 3 cut(s) 866, 887, 951
BstC8I GCNNGC 4 cut(s) 390, 867, 1166, 1180
BstDEI CTNAG 4 cut(s) 141, 312, 407, 972
BstDSI CCRYGG 1 cut(s) 1438
BstENI CCTNNNNNAGG 2 cut(s) 447, 1141
BstF5I GGATG 4 cut(s) 290, 439, 520, 1455
BstFNI CGCG 3 cut(s) 483, 865, 1168
BstHHI GCGC 4 cut(s) 483, 865, 881, 1170
BstKTI GATC 3 cut(s) 610, 1373, 1522
BstMAI GTCTC 3 cut(s) 447, 479, 1198
BstMBI GATC 3 cut(s) 607, 1370, 1519
BstMWI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
BstNI CCWGG 3 cut(s) 1382, 1514, 1593
BstSFI CTRYAG 1 cut(s) 1289
BstSLI GKGCMC 1 cut(s) 320
BstUI CGCG 3 cut(s) 483, 865, 1168
BstV1I GCAGC 5 cut(s) 572, 872, 902, 957, 1342
BstXI CCANNNNNNTGG 1 cut(s) 532
BsuI GTATCC 3 cut(s) 471, 1346, 1436
BsuRI GGCC 7 cut(s) 36, 298, 328, 798, 963, 1104, 1155
BtgI CCRYGG 1 cut(s) 1438
BtrI CACGTC 1 cut(s) 532
BtsCI GGATG 4 cut(s) 290, 439, 520, 1455
BtsI GCAGTG 1 cut(s) 1286
BtsIMutI CAGTG 7 cut(s) 126, 253, 320, 414, 642, 1286, 1557
Cac8I GCNNGC 4 cut(s) 390, 867, 1166, 1180
CaiI CAGNNNCTG 1 cut(s) 951
CfoI GCGC 4 cut(s) 483, 865, 881, 1170
Cfr10I RCCGGY 3 cut(s) 348, 827, 1304
Cfr13I GGNCC 7 cut(s) 176, 296, 327, 797, 962, 1154, 1344
Cfr9I CCCGGG 1 cut(s) 800
CseI GACGC 1 cut(s) 761
CsiI ACCWGGT 1 cut(s) 1512
Csp6I GTAC 4 cut(s) 8, 375, 850, 1547
CspAI ACCGGT 1 cut(s) 348
CviAII CATG 7 cut(s) 95, 260, 790, 856, 942, 982, 1183
CviQI GTAC 4 cut(s) 8, 375, 850, 1547
DdeI CTNAG 4 cut(s) 141, 312, 407, 972
DpnI GATC 3 cut(s) 609, 1372, 1521
DpnII GATC 3 cut(s) 607, 1370, 1519
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
Eam1104I CTCTTC 2 cut(s) 119, 1094
EarI CTCTTC 2 cut(s) 119, 1094
EciI GGCGGA 1 cut(s) 1012
Eco130I CCWWGG 4 cut(s) 183, 361, 1150, 1347
Eco147I AGGCCT 1 cut(s) 36
Eco47I GGWCC 2 cut(s) 176, 1344
Eco88I CYCGRG 2 cut(s) 622, 800
EcoNI CCTNNNNNAGG 2 cut(s) 447, 1141
EcoO109I RGGNCCY 2 cut(s) 797, 1154
EcoRI GAATTC 1 cut(s) 264
EcoRII CCWGG 3 cut(s) 1380, 1512, 1591
EcoT14I CCWWGG 4 cut(s) 183, 361, 1150, 1347
ErhI CCWWGG 4 cut(s) 183, 361, 1150, 1347
FaeI CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
FalI AAGNNNNNCTT 2 cut(s) 328, 360
FaqI GGGAC 2 cut(s) 1049, 1357
FatI CATG 7 cut(s) 94, 259, 789, 855, 941, 981, 1182
Fnu4HI GCNGC 6 cut(s) 561, 690, 861, 891, 946, 1331
FokI GGATG 4 cut(s) 297, 426, 527, 1442
Fsp4HI GCNGC 6 cut(s) 561, 690, 861, 891, 946, 1331
FspBI CTAG 4 cut(s) 209, 794, 1050, 1401
GlaI GCGC 4 cut(s) 482, 864, 880, 1169
GluI GCNGC 6 cut(s) 561, 690, 861, 891, 946, 1331
GsuI CTGGAG 1 cut(s) 1123
HaeIII GGCC 7 cut(s) 36, 298, 328, 798, 963, 1104, 1155
HgaI GACGC 1 cut(s) 761
HhaI GCGC 4 cut(s) 483, 865, 881, 1170
Hin1I GRCGYC 1 cut(s) 753
Hin1II CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
Hin6I GCGC 4 cut(s) 481, 863, 879, 1168
HinP1I GCGC 4 cut(s) 481, 863, 879, 1168
HincII GTYRAC 2 cut(s) 193, 599
HindII GTYRAC 2 cut(s) 193, 599
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 6 cut(s) 455, 653, 678, 1110, 1377, 1429
HpaI GTTAAC 1 cut(s) 193
Hpy166II GTNNAC 5 cut(s) 160, 193, 354, 377, 599
Hpy188I TCNGA 7 cut(s) 144, 577, 677, 1043, 1109, 1267, 1574
Hpy188III TCNNGA 4 cut(s) 223, 368, 923, 1374
Hpy8I GTNNAC 5 cut(s) 160, 193, 354, 377, 599
Hpy99I CGWCG 5 cut(s) 533, 722, 755, 818, 1082
HpyAV CCTTC 6 cut(s) 365, 781, 852, 1036, 1235, 1460
HpyCH4III ACNGT 8 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540
HpyCH4IV ACGT 4 cut(s) 243, 531, 816, 1311
HpyCH4V TGCA 7 cut(s) 135, 518, 890, 945, 954, 1291, 1393
HpyF10VI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
HpyF3I CTNAG 4 cut(s) 141, 312, 407, 972
HpySE526I ACGT 4 cut(s) 243, 531, 816, 1311
Hsp92I GRCGYC 1 cut(s) 753
Hsp92II CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
HspAI GCGC 4 cut(s) 481, 863, 879, 1168
KpnI GGTACC 1 cut(s) 1550
KspAI GTTAAC 1 cut(s) 193
Kzo9I GATC 3 cut(s) 607, 1370, 1519
LmnI GCTCC 5 cut(s) 23, 425, 557, 568, 943
Lsp1109I GCAGC 5 cut(s) 572, 872, 902, 957, 1342
LweI GCATC 3 cut(s) 159, 505, 568
MabI ACCWGGT 1 cut(s) 1512
MaeI CTAG 4 cut(s) 209, 794, 1050, 1401
MaeII ACGT 4 cut(s) 243, 531, 816, 1311
MaeIII GTNAC 7 cut(s) 168, 220, 244, 307, 1258, 1408, 1595
MalI GATC 3 cut(s) 609, 1372, 1521
MbiI CCGCTC 1 cut(s) 692
MboI GATC 3 cut(s) 607, 1370, 1519
MboII GAAGA 5 cut(s) 136, 488, 703, 1081, 1084
MhlI GDGCHC 3 cut(s) 320, 430, 623
MluCI AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
MlyI GAGTC 5 cut(s) 449, 647, 687, 1104, 1386
MroXI GAANNNNTTC 1 cut(s) 1088
MseI TTAA 3 cut(s) 192, 696, 821
MslI CAYNNNNRTG 5 cut(s) 93, 155, 258, 382, 530
Mva1269I GAATGC 1 cut(s) 893
MvaI CCWGG 3 cut(s) 1382, 1514, 1593
MvnI CGCG 3 cut(s) 483, 865, 1168
MwoI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
NciI CCSGG 8 cut(s) 174, 330, 603, 801, 802, 1251, 1274, 1342
NdeII GATC 3 cut(s) 607, 1370, 1519
NlaIII CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
NlaIV GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
NmuCI GTSAC 4 cut(s) 220, 244, 1258, 1408
OliI CACNNNNGTG 1 cut(s) 382
PaeR7I CTCGAG 1 cut(s) 622
PceI AGGCCT 1 cut(s) 36
PctI GAATGC 1 cut(s) 893
PdmI GAANNNNTTC 1 cut(s) 1088
PfeI GAWTC 1 cut(s) 1429
PflMI CCANNNNNTGG 1 cut(s) 1556
PfoI TCCNGGA 1 cut(s) 1340
PinAI ACCGGT 1 cut(s) 348
PkrI GCNGC 6 cut(s) 562, 691, 862, 892, 947, 1332
PleI GAGTC 5 cut(s) 449, 647, 686, 1104, 1385
PpsI GAGTC 5 cut(s) 449, 647, 686, 1104, 1385
Psp6I CCWGG 3 cut(s) 1380, 1512, 1591
PspGI CCWGG 3 cut(s) 1380, 1512, 1591
PspN4I GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
PspPI GGNCC 7 cut(s) 176, 296, 327, 797, 962, 1154, 1344
PspXI VCTCGAGB 1 cut(s) 622
PstI CTGCAG 1 cut(s) 1293
PstNI CAGNNNCTG 1 cut(s) 951
RsaI GTAC 4 cut(s) 9, 376, 851, 1548
RsaNI GTAC 4 cut(s) 8, 375, 850, 1547
RseI CAYNNNNRTG 5 cut(s) 93, 155, 258, 382, 530
SaqAI TTAA 3 cut(s) 192, 696, 821
SatI GCNGC 6 cut(s) 561, 690, 861, 891, 946, 1331
Sau3AI GATC 3 cut(s) 607, 1370, 1519
Sau96I GGNCC 7 cut(s) 176, 296, 327, 797, 962, 1154, 1344
ScaI AGTACT 1 cut(s) 9
SchI GAGTC 5 cut(s) 449, 647, 687, 1104, 1386
SduI GDGCHC 3 cut(s) 320, 430, 623
SexAI ACCWGGT 1 cut(s) 1512
SfaNI GCATC 3 cut(s) 159, 505, 568
SfcI CTRYAG 1 cut(s) 1289
Sfr274I CTCGAG 1 cut(s) 622
SgrAI CRCCGGYG 1 cut(s) 827
SinI GGWCC 2 cut(s) 176, 1344
SlaI CTCGAG 1 cut(s) 622
SmaI CCCGGG 1 cut(s) 802
SmiMI CAYNNNNRTG 5 cut(s) 93, 155, 258, 382, 530
SmlI CTYRAG 1 cut(s) 622
SmoI CTYRAG 1 cut(s) 622
SpeI ACTAGT 1 cut(s) 1400
Sse9I AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
SseBI AGGCCT 1 cut(s) 36
SsiI CCGC 7 cut(s) 690, 915, 1017, 1023, 1176, 1463, 1544
SspMI CTAG 4 cut(s) 209, 794, 1050, 1401
StuI AGGCCT 1 cut(s) 36
StyI CCWWGG 4 cut(s) 183, 361, 1150, 1347
TaaI ACNGT 8 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540
TaiI ACGT 4 cut(s) 246, 534, 819, 1314
TaqI TCGA 8 cut(s) 59, 235, 528, 623, 897, 924, 1059, 1077
TasI AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
TatI WGTACW 1 cut(s) 7
TauI GCSGC 1 cut(s) 692
TfiI GAWTC 1 cut(s) 1429
Tru1I TTAA 3 cut(s) 192, 696, 821
Tru9I TTAA 3 cut(s) 192, 696, 821
TscAI CASTG 7 cut(s) 126, 260, 320, 421, 642, 1293, 1557
TseFI GTSAC 4 cut(s) 220, 244, 1258, 1408
TseI GCWGC 5 cut(s) 560, 860, 890, 945, 1330
Tsp45I GTSAC 4 cut(s) 220, 244, 1258, 1408
TspDTI ATGAA 5 cut(s) 45, 111, 428, 1199, 1421
TspGWI ACGGA 4 cut(s) 177, 1210, 1383, 1455
TspMI CCCGGG 1 cut(s) 800
TspRI CASTG 7 cut(s) 126, 260, 320, 421, 642, 1293, 1557
Van91I CCANNNNNTGG 1 cut(s) 1556
VpaK11BI GGWCC 2 cut(s) 176, 1344
XagI CCTNNNNNAGG 2 cut(s) 447, 1141
XapI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
XcmI CCANNNNNNNNNTGG 2 cut(s) 278, 1557
XhoI CTCGAG 1 cut(s) 622
XmaI CCCGGG 1 cut(s) 800
XmnI GAANNNNTTC 1 cut(s) 1088
XspI CTAG 4 cut(s) 209, 794, 1050, 1401
ZrmI AGTACT 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.