RchiOBHm_Chr1g0371241

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001265
Physical Location & Seq
Reverse (-)
60541945 .. 60544439
2495 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59533

Sequence Viewer

Length: 1725 bp
ATGGAAGTACTCAACAGCTCCATTTTCCTTTTAGGCCTTTGCCTCCTCCTGGCTTCATCGACAATATCATCGGCAGAACCCAGAACCCAGAACCATGAATTTGTTATTCAAGCAACACCAGTGAAGAGGCTGTGCAAAACTCAGAATAGCATCACCGTGAACGGACAGTTACCCGGACCAACCTTGGAAGTTAACAATGGCGACACTCTAGTCATCAAGGTCACGAACAAAGCTCGATACAACGTGACTATTCACTGGCATGGAATTCGCCAAATGAGAACTGGATGGGCTGATGGGCCAGAATTTGTAACTCAGTGCCCGATTAGGCCCGGAGGAAGCTACACTTACCGGTTTACAATCCAAGGTCAAGAAGGTACACTCTGGTGGCACGCTCACAGCTCTTGGCTTAGAGCCACAGTTTATGGAGCACTTATTATTCATCCTAAACAAGGAGACTCGTATCCATTCCCTAAACCAAAGCGCGAGACAACACTTCTTCTCGGTGAGTGGTGGAATGCAAACCCCATCGACGTGGTGAGGGAAGCAACCAGAACCGGAGCAGCTCCAAATGTTTCTGATGCTTACACAATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCGAGCAAAGACACAGTGATAGTTCCCATAGACTCCGGCGAAACCAACCTCCTCCGAATCATCAACGCCGCTCTTAACCAGCAACTTTTCTTCACCGTCGCCAACCATAAACTCACCGTTGTCGGTGCCGACGCCTCCTACACCAAGCCCTTCACCACCACTACCCTCATGTTAGGCCCCGGGCAGACCACCGACGTTTTAATCACCGGCGACCAGCCACCATCTCGGTACTACATGGCAGCGCGTGCCTATTTCAGCGCACAAAATGCAGCATTCGACAACACCACCACCACCGCCATTCTCGAGTACAAGTCTGCTCCATGCAGCAACTGCAAAAACGGCTCATCAACTAAGCCCGTCATGCCCCCACTCCCTGCTTACAACGACACCAACACCTCCTCCGCCTTCACCACCAGCTTCCGAAGCCCTAGAAAGGTCGAAGTCCCCACCGAAATCGACGAGAACCTCTTCTTCACAGTCGGCCTCGGACTCAACAACTGCCCCAAAAATTTCCCCTCCAGTAGGTGCCAAGGCCCTAACGGCACGCGCTTCACCGCCAGCATGAACAATGTCTCTTTTGTGCTACCAAACAACATCTCCATCCTTCAAGCTTACCAGCAGAATATCCCCGGAGTTGTCACTTCTGATTTCCCCGCAAACCCGCCGCGGCAGTTTGACTACACCGGCAACGTGAGCCAATCACTCTGGCAGCCCAACTCCGGGACCAAGGGATACCCATTGAAATACGGATCAAGAGTCCAGGTGGTGTTGCAAGACACTAGTATTGTCACACCCGAAAACCACCCGATTCATCTCCACGGATACGATTTCTACGTCCTTGCAGAAGGGTTTGGTAATTTCAATGCCAAGACTGACACTAAAAAATTCAACCTGGTTGATCCTCCTATGAGGAACACAGTTGCGGTACCAGTGAATGGTTGGGCTGTCATCAGATTTGTGGCTGACAATCCAGGTGCTTGGATAATGCATTGTCACTTGGATGTTCACATCAACTGGGGTTTGGCTATGGTATTCCTGGTGGATAACGGAGTCGGGAAGCTCCAGTCAATCGAGTCTCCACCGTCGGATCTTCCCCTGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

574

Amino Acids

63.11

Weight (kDa)

8.23

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 36 - 150 4.3e-45 Multicopper oxidase
Cu-oxidase PF00394 162 - 312 4.2e-44 Multicopper oxidase
Cu-oxidase_2 PF07731 423 - 556 1.1e-42 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
Acc65I GGTACC 1 cut(s) 1546
AccB1I GGYRCC 3 cut(s) 746, 1146, 1546
AccB7I CCANNNNNTGG 1 cut(s) 1556
AccBSI CCGCTC 1 cut(s) 692
AccII CGCG 4 cut(s) 483, 865, 1168, 1288
AciI CCGC 9 cut(s) 690, 915, 1023, 1176, 1275, 1283, 1286, 1288, 1544
AclWI GGATC 3 cut(s) 1378, 1514, 1716
AcsI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
AcyI GRCGYC 1 cut(s) 753
AfaI GTAC 5 cut(s) 9, 376, 851, 929, 1548
AfiI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
AgeI ACCGGT 1 cut(s) 348
AgsI TTSAA 5 cut(s) 110, 1229, 1363, 1483, 1510
AhlI ACTAGT 1 cut(s) 1400
AjiI CACGTC 1 cut(s) 532
AjnI CCWGG 6 cut(s) 48, 601, 1380, 1512, 1591, 1656
AleI CACNNNNGTG 1 cut(s) 382
AluBI AGCT 8 cut(s) 18, 233, 339, 399, 563, 1038, 1232, 1681
AluI AGCT 8 cut(s) 18, 233, 339, 399, 563, 1038, 1232, 1681
Alw21I GWGCWC 2 cut(s) 430, 623
Alw26I GTCTC 4 cut(s) 447, 479, 1198, 1701
AlwI GGATC 3 cut(s) 1378, 1514, 1716
AlwNI CAGNNNCTG 1 cut(s) 951
Ama87I CYCGRG 3 cut(s) 622, 800, 923
AoxI GGCC 6 cut(s) 34, 296, 326, 796, 1102, 1153
ApeKI GCWGC 5 cut(s) 560, 860, 890, 945, 1330
ApoI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
AsiGI ACCGGT 1 cut(s) 348
Asp700I GAANNNNTTC 1 cut(s) 1088
Asp718I GGTACC 1 cut(s) 1546
AspLEI GCGC 4 cut(s) 483, 865, 881, 1170
AspS9I GGNCC 6 cut(s) 176, 296, 327, 797, 1154, 1344
AsuC2I CCSGG 6 cut(s) 174, 330, 801, 802, 1251, 1342
AvaI CYCGRG 3 cut(s) 622, 800, 923
AvaII GGWCC 2 cut(s) 176, 1344
BaeGI GKGCMC 1 cut(s) 320
BanI GGYRCC 3 cut(s) 746, 1146, 1546
Bbv12I GWGCWC 2 cut(s) 430, 623
BbvI GCAGC 5 cut(s) 572, 872, 902, 957, 1342
BccI CCATC 5 cut(s) 279, 287, 533, 850, 1229
BceAI ACGGC 2 cut(s) 976, 1177
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BciT130I CCWGG 6 cut(s) 50, 603, 1382, 1514, 1593, 1658
BciVI GTATCC 3 cut(s) 471, 1346, 1436
BcnI CCSGG 6 cut(s) 174, 330, 801, 802, 1251, 1342
BcoDI GTCTC 4 cut(s) 447, 479, 1198, 1701
BcuI ACTAGT 1 cut(s) 1400
BfaI CTAG 3 cut(s) 209, 1050, 1401
BfuI GTATCC 3 cut(s) 471, 1346, 1436
BglI GCCNNNNNGGC 1 cut(s) 1161
BisI GCNGC 8 cut(s) 561, 690, 861, 891, 946, 1286, 1289, 1331
BlsI GCNGC 8 cut(s) 562, 691, 862, 892, 947, 1287, 1290, 1332
BmcAI AGTACT 1 cut(s) 9
Bme18I GGWCC 2 cut(s) 176, 1344
BmeT110I CYCGRG 3 cut(s) 622, 800, 923
BmgBI CACGTC 1 cut(s) 532
BmgT120I GGNCC 6 cut(s) 176, 296, 327, 797, 1154, 1344
BmiI GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
BmrI ACTGGG 1 cut(s) 1645
BmsI GCATC 2 cut(s) 159, 568
BmuI ACTGGG 1 cut(s) 1645
BpmI CTGGAG 2 cut(s) 1123, 1667
BpuMI CCSGG 6 cut(s) 174, 330, 801, 802, 1251, 1342
BsaHI GRCGYC 1 cut(s) 753
BsaWI WCCGGW 2 cut(s) 348, 554
BsaXI ACNNNNNCTCC 4 cut(s) 1004, 1034, 1202, 1232
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
Bse118I RCCGGY 3 cut(s) 348, 827, 1304
Bse1I ACTGG 7 cut(s) 119, 260, 286, 1140, 1550, 1640, 1684
BseBI CCWGG 6 cut(s) 50, 603, 1382, 1514, 1593, 1658
BseGI GGATG 4 cut(s) 290, 439, 1221, 1627
BseLI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
BseMII CTCAG 2 cut(s) 155, 326
BseNI ACTGG 7 cut(s) 119, 260, 286, 1140, 1550, 1640, 1684
BseRI GAGGAG 3 cut(s) 35, 662, 1009
BseSI GKGCMC 1 cut(s) 320
BseXI GCAGC 5 cut(s) 572, 872, 902, 957, 1342
Bsh1236I CGCG 4 cut(s) 483, 865, 1168, 1288
BshFI GGCC 6 cut(s) 36, 298, 328, 798, 1104, 1155
BshNI GGYRCC 3 cut(s) 746, 1146, 1546
BshTI ACCGGT 1 cut(s) 348
BsiHKAI GWGCWC 2 cut(s) 430, 623
BsiHKCI CYCGRG 3 cut(s) 622, 800, 923
BslFI GGGAC 2 cut(s) 1049, 1357
BslI CCNNNNNNNGG 7 cut(s) 49, 449, 1054, 1143, 1340, 1341, 1556
BsmAI GTCTC 4 cut(s) 447, 479, 1198, 1701
BsmFI GGGAC 2 cut(s) 1049, 1357
BsmI GAATGC 2 cut(s) 520, 893
BsnI GGCC 6 cut(s) 36, 298, 328, 798, 1104, 1155
BsoBI CYCGRG 3 cut(s) 622, 800, 923
Bsp1286I GDGCHC 3 cut(s) 320, 430, 623
Bsp143I GATC 4 cut(s) 607, 1370, 1519, 1708
BspACI CCGC 9 cut(s) 690, 915, 1023, 1176, 1275, 1283, 1286, 1288, 1544
BspANI GGCC 6 cut(s) 36, 298, 328, 798, 1104, 1155
BspCNI CTCAG 2 cut(s) 154, 325
BspFNI CGCG 4 cut(s) 483, 865, 1168, 1288
BspLI GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
BspPI GGATC 3 cut(s) 1378, 1514, 1716
BspT107I GGYRCC 3 cut(s) 746, 1146, 1546
BsrBI CCGCTC 1 cut(s) 692
BsrFI RCCGGY 3 cut(s) 348, 827, 1304
BsrI ACTGG 7 cut(s) 119, 260, 286, 1140, 1550, 1640, 1684
BssAI RCCGGY 3 cut(s) 348, 827, 1304
BssMI GATC 4 cut(s) 607, 1370, 1519, 1708
BssNI GRCGYC 1 cut(s) 753
BssT1I CCWWGG 4 cut(s) 183, 361, 1150, 1347
Bst2UI CCWGG 6 cut(s) 50, 603, 1382, 1514, 1593, 1658
Bst4CI ACNGT 9 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540, 1704
Bst6I CTCTTC 2 cut(s) 119, 1094
BstACI GRCGYC 1 cut(s) 753
BstAPI GCANNNNNTGC 3 cut(s) 866, 887, 951
BstC8I GCNNGC 4 cut(s) 390, 867, 1166, 1180
BstDEI CTNAG 4 cut(s) 141, 312, 407, 972
BstDSI CCRYGG 2 cut(s) 1286, 1438
BstENI CCTNNNNNAGG 2 cut(s) 447, 1141
BstF5I GGATG 4 cut(s) 290, 439, 1221, 1627
BstFNI CGCG 4 cut(s) 483, 865, 1168, 1288
BstHHI GCGC 4 cut(s) 483, 865, 881, 1170
BstKTI GATC 4 cut(s) 610, 1373, 1522, 1711
BstMAI GTCTC 4 cut(s) 447, 479, 1198, 1701
BstMBI GATC 4 cut(s) 607, 1370, 1519, 1708
BstMWI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
BstNI CCWGG 6 cut(s) 50, 603, 1382, 1514, 1593, 1658
BstSLI GKGCMC 1 cut(s) 320
BstUI CGCG 4 cut(s) 483, 865, 1168, 1288
BstV1I GCAGC 5 cut(s) 572, 872, 902, 957, 1342
BstX2I RGATCY 1 cut(s) 1708
BstXI CCANNNNNNTGG 2 cut(s) 532, 1599
BstYI RGATCY 1 cut(s) 1708
BsuI GTATCC 3 cut(s) 471, 1346, 1436
BsuRI GGCC 6 cut(s) 36, 298, 328, 798, 1104, 1155
BtgI CCRYGG 2 cut(s) 1286, 1438
BtrI CACGTC 1 cut(s) 532
BtsCI GGATG 4 cut(s) 290, 439, 1221, 1627
BtsIMutI CAGTG 5 cut(s) 126, 253, 320, 642, 1557
Cac8I GCNNGC 4 cut(s) 390, 867, 1166, 1180
CaiI CAGNNNCTG 1 cut(s) 951
CfoI GCGC 4 cut(s) 483, 865, 881, 1170
Cfr10I RCCGGY 3 cut(s) 348, 827, 1304
Cfr13I GGNCC 6 cut(s) 176, 296, 327, 797, 1154, 1344
Cfr42I CCGCGG 1 cut(s) 1289
Cfr9I CCCGGG 1 cut(s) 800
CseI GACGC 1 cut(s) 761
CsiI ACCWGGT 2 cut(s) 601, 1512
Csp6I GTAC 5 cut(s) 8, 375, 850, 928, 1547
CspAI ACCGGT 1 cut(s) 348
CviAII CATG 7 cut(s) 95, 260, 790, 856, 942, 982, 1183
CviQI GTAC 5 cut(s) 8, 375, 850, 928, 1547
DdeI CTNAG 4 cut(s) 141, 312, 407, 972
DpnI GATC 4 cut(s) 609, 1372, 1521, 1710
DpnII GATC 4 cut(s) 607, 1370, 1519, 1708
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
Eam1104I CTCTTC 2 cut(s) 119, 1094
EarI CTCTTC 2 cut(s) 119, 1094
EciI GGCGGA 1 cut(s) 1012
Eco130I CCWWGG 4 cut(s) 183, 361, 1150, 1347
Eco147I AGGCCT 1 cut(s) 36
Eco47I GGWCC 2 cut(s) 176, 1344
Eco88I CYCGRG 3 cut(s) 622, 800, 923
EcoNI CCTNNNNNAGG 2 cut(s) 447, 1141
EcoO109I RGGNCCY 2 cut(s) 797, 1154
EcoRI GAATTC 1 cut(s) 264
EcoRII CCWGG 6 cut(s) 48, 601, 1380, 1512, 1591, 1656
EcoT14I CCWWGG 4 cut(s) 183, 361, 1150, 1347
EcoT22I ATGCAT 1 cut(s) 1611
ErhI CCWWGG 4 cut(s) 183, 361, 1150, 1347
FaeI CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
FalI AAGNNNNNCTT 2 cut(s) 328, 360
FaqI GGGAC 2 cut(s) 1049, 1357
FatI CATG 7 cut(s) 94, 259, 789, 855, 941, 981, 1182
FauI CCCGC 2 cut(s) 1282, 1290
Fnu4HI GCNGC 8 cut(s) 561, 690, 861, 891, 946, 1286, 1289, 1331
FokI GGATG 4 cut(s) 297, 426, 1208, 1634
Fsp4HI GCNGC 8 cut(s) 561, 690, 861, 891, 946, 1286, 1289, 1331
FspBI CTAG 3 cut(s) 209, 1050, 1401
GlaI GCGC 4 cut(s) 482, 864, 880, 1169
GluI GCNGC 8 cut(s) 561, 690, 861, 891, 946, 1286, 1289, 1331
GsuI CTGGAG 2 cut(s) 1123, 1667
HaeIII GGCC 6 cut(s) 36, 298, 328, 798, 1104, 1155
HgaI GACGC 1 cut(s) 761
HhaI GCGC 4 cut(s) 483, 865, 881, 1170
Hin1I GRCGYC 1 cut(s) 753
Hin1II CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
Hin6I GCGC 4 cut(s) 481, 863, 879, 1168
HinP1I GCGC 4 cut(s) 481, 863, 879, 1168
HincII GTYRAC 2 cut(s) 193, 599
HindII GTYRAC 2 cut(s) 193, 599
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 8 cut(s) 455, 653, 678, 1110, 1377, 1429, 1671, 1694
HpaI GTTAAC 1 cut(s) 193
Hpy166II GTNNAC 6 cut(s) 160, 193, 354, 377, 599, 1627
Hpy188I TCNGA 8 cut(s) 144, 577, 677, 1043, 1109, 1267, 1574, 1708
Hpy188III TCNNGA 5 cut(s) 223, 368, 923, 1374, 1675
Hpy8I GTNNAC 6 cut(s) 160, 193, 354, 377, 599, 1627
Hpy99I CGWCG 6 cut(s) 533, 722, 755, 818, 1082, 1708
HpyAV CCTTC 5 cut(s) 365, 781, 1036, 1235, 1460
HpyCH4III ACNGT 9 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540, 1704
HpyCH4IV ACGT 5 cut(s) 243, 531, 816, 1311, 1455
HpyCH4V TGCA 8 cut(s) 135, 518, 890, 945, 954, 1393, 1463, 1609
HpyF10VI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
HpyF3I CTNAG 4 cut(s) 141, 312, 407, 972
HpySE526I ACGT 5 cut(s) 243, 531, 816, 1311, 1455
Hsp92I GRCGYC 1 cut(s) 753
Hsp92II CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
HspAI GCGC 4 cut(s) 481, 863, 879, 1168
KpnI GGTACC 1 cut(s) 1550
KspAI GTTAAC 1 cut(s) 193
KspI CCGCGG 1 cut(s) 1289
Kzo9I GATC 4 cut(s) 607, 1370, 1519, 1708
LmnI GCTCC 6 cut(s) 23, 425, 557, 568, 943, 1686
Lsp1109I GCAGC 5 cut(s) 572, 872, 902, 957, 1342
LweI GCATC 2 cut(s) 159, 568
MabI ACCWGGT 2 cut(s) 601, 1512
MaeI CTAG 3 cut(s) 209, 1050, 1401
MaeII ACGT 5 cut(s) 243, 531, 816, 1311, 1455
MaeIII GTNAC 7 cut(s) 168, 220, 244, 307, 1258, 1408, 1613
MalI GATC 4 cut(s) 609, 1372, 1521, 1710
MbiI CCGCTC 1 cut(s) 692
MboI GATC 4 cut(s) 607, 1370, 1519, 1708
MboII GAAGA 6 cut(s) 136, 488, 703, 1081, 1084, 1703
MflI RGATCY 1 cut(s) 1708
MhlI GDGCHC 3 cut(s) 320, 430, 623
MluCI AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
MlyI GAGTC 6 cut(s) 449, 647, 1104, 1386, 1680, 1703
MmeI TCCRAC 1 cut(s) 1686
Mph1103I ATGCAT 1 cut(s) 1611
MroXI GAANNNNTTC 1 cut(s) 1088
MseI TTAA 4 cut(s) 192, 696, 821, 1723
MslI CAYNNNNRTG 5 cut(s) 155, 258, 382, 530, 1620
MspA1I CMGCKG 1 cut(s) 1288
Mva1269I GAATGC 2 cut(s) 520, 893
MvaI CCWGG 6 cut(s) 50, 603, 1382, 1514, 1593, 1658
MvnI CGCG 4 cut(s) 483, 865, 1168, 1288
MwoI GCNNNNNNNGC 8 cut(s) 866, 887, 951, 960, 982, 1044, 1161, 1314
NciI CCSGG 6 cut(s) 174, 330, 801, 802, 1251, 1342
NdeII GATC 4 cut(s) 607, 1370, 1519, 1708
NlaIII CATG 7 cut(s) 98, 263, 793, 859, 945, 985, 1186
NlaIV GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
NmuCI GTSAC 5 cut(s) 220, 244, 1258, 1408, 1613
NsiI ATGCAT 1 cut(s) 1611
OliI CACNNNNGTG 1 cut(s) 382
PaeR7I CTCGAG 2 cut(s) 622, 923
PceI AGGCCT 1 cut(s) 36
PcsI WCGNNNNNNNCGW 1 cut(s) 1452
PctI GAATGC 2 cut(s) 520, 893
PdmI GAANNNNTTC 1 cut(s) 1088
PfeI GAWTC 2 cut(s) 678, 1429
PflMI CCANNNNNTGG 1 cut(s) 1556
PfoI TCCNGGA 1 cut(s) 1340
PinAI ACCGGT 1 cut(s) 348
PkrI GCNGC 8 cut(s) 562, 691, 862, 892, 947, 1287, 1290, 1332
PleI GAGTC 6 cut(s) 449, 647, 1104, 1385, 1679, 1702
PpsI GAGTC 6 cut(s) 449, 647, 1104, 1385, 1679, 1702
Psp6I CCWGG 6 cut(s) 48, 601, 1380, 1512, 1591, 1656
PspGI CCWGG 6 cut(s) 48, 601, 1380, 1512, 1591, 1656
PspN4I GGNNCC 5 cut(s) 748, 799, 1148, 1345, 1548
PspPI GGNCC 6 cut(s) 176, 296, 327, 797, 1154, 1344
PspXI VCTCGAGB 1 cut(s) 622
PstNI CAGNNNCTG 1 cut(s) 951
PsuI RGATCY 1 cut(s) 1708
RsaI GTAC 5 cut(s) 9, 376, 851, 929, 1548
RsaNI GTAC 5 cut(s) 8, 375, 850, 928, 1547
RseI CAYNNNNRTG 5 cut(s) 155, 258, 382, 530, 1620
SacII CCGCGG 1 cut(s) 1289
SaqAI TTAA 4 cut(s) 192, 696, 821, 1723
SatI GCNGC 8 cut(s) 561, 690, 861, 891, 946, 1286, 1289, 1331
Sau3AI GATC 4 cut(s) 607, 1370, 1519, 1708
Sau96I GGNCC 6 cut(s) 176, 296, 327, 797, 1154, 1344
ScaI AGTACT 1 cut(s) 9
SchI GAGTC 6 cut(s) 449, 647, 1104, 1386, 1680, 1703
SduI GDGCHC 3 cut(s) 320, 430, 623
SexAI ACCWGGT 2 cut(s) 601, 1512
SfaNI GCATC 2 cut(s) 159, 568
Sfr274I CTCGAG 2 cut(s) 622, 923
Sfr303I CCGCGG 1 cut(s) 1289
SgrAI CRCCGGYG 1 cut(s) 827
SgrBI CCGCGG 1 cut(s) 1289
SinI GGWCC 2 cut(s) 176, 1344
SlaI CTCGAG 2 cut(s) 622, 923
SmaI CCCGGG 1 cut(s) 802
SmiMI CAYNNNNRTG 5 cut(s) 155, 258, 382, 530, 1620
SmlI CTYRAG 2 cut(s) 622, 923
SmoI CTYRAG 2 cut(s) 622, 923
SpeI ACTAGT 1 cut(s) 1400
Sse9I AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
SseBI AGGCCT 1 cut(s) 36
SsiI CCGC 9 cut(s) 690, 915, 1023, 1176, 1275, 1283, 1286, 1288, 1544
SspMI CTAG 3 cut(s) 209, 1050, 1401
StuI AGGCCT 1 cut(s) 36
StyI CCWWGG 4 cut(s) 183, 361, 1150, 1347
TaaI ACNGT 9 cut(s) 157, 168, 418, 637, 718, 739, 1099, 1540, 1704
TaiI ACGT 5 cut(s) 246, 534, 819, 1314, 1458
TaqI TCGA 9 cut(s) 59, 235, 528, 623, 897, 924, 1059, 1077, 1692
TasI AATT 6 cut(s) 98, 264, 302, 1129, 1477, 1505
TatI WGTACW 2 cut(s) 7, 927
TauI GCSGC 3 cut(s) 692, 1288, 1291
TfiI GAWTC 2 cut(s) 678, 1429
Tru1I TTAA 4 cut(s) 192, 696, 821, 1723
Tru9I TTAA 4 cut(s) 192, 696, 821, 1723
TscAI CASTG 5 cut(s) 126, 260, 320, 642, 1557
TseFI GTSAC 5 cut(s) 220, 244, 1258, 1408, 1613
TseI GCWGC 5 cut(s) 560, 860, 890, 945, 1330
Tsp45I GTSAC 5 cut(s) 220, 244, 1258, 1408, 1613
TspDTI ATGAA 5 cut(s) 45, 111, 428, 1199, 1421
TspGWI ACGGA 4 cut(s) 177, 1383, 1455, 1683
TspMI CCCGGG 1 cut(s) 800
TspRI CASTG 5 cut(s) 126, 260, 320, 642, 1557
Van91I CCANNNNNTGG 1 cut(s) 1556
VpaK11BI GGWCC 2 cut(s) 176, 1344
XagI CCTNNNNNAGG 2 cut(s) 447, 1141
XapI RAATTY 5 cut(s) 98, 264, 302, 1129, 1505
XcmI CCANNNNNNNNNTGG 2 cut(s) 278, 1557
XhoI CTCGAG 2 cut(s) 622, 923
XmaI CCCGGG 1 cut(s) 800
XmnI GAANNNNTTC 1 cut(s) 1088
XspI CTAG 3 cut(s) 209, 1050, 1401
ZrmI AGTACT 1 cut(s) 9
Zsp2I ATGCAT 1 cut(s) 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.