FvH4_7g07750

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001265
Physical Location & Seq
Forward (+)
7643077 .. 7645694
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07750.t1

Sequence Viewer

Length: 1728 bp
ATGGAGGCACCTAGTAGCATTCTCCTCCTAGGCCTTTGCCTCCTCTTTGCTTCTTCAGCAATGACGTCGACCTTGGCCGAACCCAAAGCTCACCACCATGAATTTGTTGTCCAAGCAACACCAGTGAAGAGGCTGTGCAAAACCCACAACAGCATCACAGTGAATGGACAGTTCCCTGGACCAACCTTGGAAGTAAACAATGGAGACACCCTGGTCGTTAAAGTCACTAACAAAGGTCGATACAACGTCACCATTCACTGGCATGGCATTCGGCAAATGAGAACTGGATGGGCGGATGGTCCCGAGTTTGTTACTCAATGTCCTATTAGGCCAGGAGGGAGTTACACCTACCGGTTTACAGTGCAGGGCCAAGAAGGCACTCTATGGTGGCACGCACACAGCTCATGGCTTAGAGCCACCGTGTATGGAGCTATTATTATTCATCCAAAACAAGGAGACTCGTATCCATTCCCTAAACCAAATCGTCAAGAAACCCTTCTTCTCGGTGAGTGGTGGGACGCTAACCCTATTGACGTGGTCAGGCAGGCAACTCGCACCGGAGCAGCTCCGAATGTTTCTAACGCATACACCATCAATGGCCAACCTGGTGATCTTTACAATTGCTCCAGCAAAGGCACTGTCATTGTTCCCATAGACTCCGGTGAGACCAACCTTTTGAGAGTGGTAAATGCCGCCCTCAACCAACCTCTTTTCTTTTCCGTCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCTTCCTACACCAAGCCTTTCACCACCAAAGTTCTCATGCTTGGACCTGGTCAGACCACCGATGTTTTAATCTCCGGAGACCAGCAGCCATCTCGATACTACATGGCAGCGCATGCTTATTTCAGTGCACAAAACGCTCCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTCCGTTGCAATAACACTACTAGCTGCAAAAAGAGTAAACCCATAATGCCACAGCTGCCAGCTTTCAATGACACAAACACTGCAGAAGTCTTCACTAGGAGCTTCAGAAGCCCTAGAAAAGTTGAGGTCCCTACAGAAATCGACGAGAACCTCTTCTTCACAATAGGACTTGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGATGCCAAGGCCCCAATGGCACACGCTTCGCTGCTAGCATGAACAATGTCTCATTTGTACTCCCAAACAACATGTCAATTCTTCAAGCTTACCAGCAAAACATTCCTGGAGTTTATACTAGTGATTTTCCAGCCAACCCGCCAAAGAAATTCGATTACACTGGGAATGTCAGCCGCTCCCTTTGGCAACCCAGTTTTGGAACTAAGGGATACAAGTTGAAGTATGGGTCTAGAGTTCAGGTGGTGTTACAAGACACAAGTATTGTCACACCAGAGAACCATCCAATTCATCTGCACGGATACGATTTCTACATCCTTGCACAGGGTTTTGGAAACTTCAATGCCAAGACTGATACTAAGAAGTTTAACCTTGTTGATCCACCTCTGAGGAACACTGTGTCGGTGCCTGCAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGTTGTTGCATTGTCACTTGGATGTTCATATCAACTGGGGTTTGGGCATGTTTTTCCTGGTGGACAATGGAGTTGGGGAGCTGCAAACAATAGAACCTCCTCCTGCAGATTTACCTCGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

576

Amino Acids

63.7

Weight (kDa)

9.06

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 37 - 151 8.8e-45 Multicopper oxidase
Cu-oxidase PF00394 165 - 312 3.6e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 424 - 557 1.5e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 212
AatII GACGTC 1 cut(s) 68
AccB1I GGYRCC 2 cut(s) 7, 1549
AccB7I CCANNNNNTGG 1 cut(s) 258
AccBSI CCGCTC 1 cut(s) 1323
AccI GTMKAC 1 cut(s) 68
AccIII TCCGGA 1 cut(s) 830
AciI CCGC 4 cut(s) 293, 693, 1286, 1321
AclWI GGATC 1 cut(s) 1517
AcoI YGGCCR 2 cut(s) 75, 598
AcsI RAATTY 2 cut(s) 101, 1295
AcuI CTGAAG 2 cut(s) 39, 1027
AcyI GRCGYC 1 cut(s) 65
AfaI GTAC 1 cut(s) 1206
AfiI CCNNNNNNNGG 5 cut(s) 258, 452, 1343, 1468, 1559
AflIII ACRYGT 1 cut(s) 1218
AgeI ACCGGT 1 cut(s) 351
AgsI TTSAA 5 cut(s) 929, 1006, 1232, 1366, 1486
AhlI ACTAGT 1 cut(s) 1265
AjiI CACGTC 1 cut(s) 535
AjnI CCWGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
Alw21I GWGCWC 1 cut(s) 886
Alw26I GTCTC 5 cut(s) 198, 450, 659, 828, 1201
Alw44I GTGCAC 1 cut(s) 882
AlwI GGATC 1 cut(s) 1517
Ama87I CYCGRG 1 cut(s) 302
Aor13HI TCCGGA 1 cut(s) 830
AoxI GGCC 6 cut(s) 31, 75, 329, 367, 598, 1156
ApaLI GTGCAC 1 cut(s) 882
ApeKI GCWGC 7 cut(s) 563, 841, 863, 963, 994, 1178, 1684
ApoI RAATTY 2 cut(s) 101, 1295
ArsI GACNNNNNNTTYG 6 cut(s) 624, 656, 658, 690, 1205, 1237
AsiGI ACCGGT 1 cut(s) 351
Asp700I GAANNNNTTC 2 cut(s) 495, 1091
AspA2I CCTAGG 1 cut(s) 28
AspLEI GCGC 1 cut(s) 868
AspS9I GGNCC 6 cut(s) 179, 299, 367, 800, 1066, 1157
AsuHPI GGTGA 6 cut(s) 83, 241, 518, 620, 674, 769
AsuNHI GCTAGC 1 cut(s) 1181
AvaI CYCGRG 1 cut(s) 302
AvaII GGWCC 4 cut(s) 179, 299, 800, 1066
AvrII CCTAGG 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 886
BalI TGGCCA 1 cut(s) 600
BanI GGYRCC 2 cut(s) 7, 1549
BbsI GAAGAC 1 cut(s) 1021
Bbv12I GWGCWC 1 cut(s) 886
BbvI GCAGC 7 cut(s) 575, 853, 875, 950, 981, 1165, 1671
BccI CCATC 5 cut(s) 282, 290, 599, 853, 1434
BciT130I CCWGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
BciVI GTATCC 3 cut(s) 474, 1349, 1439
BcoDI GTCTC 5 cut(s) 198, 450, 659, 828, 1201
BcuI ACTAGT 1 cut(s) 1265
BfaI CTAG 9 cut(s) 12, 29, 960, 1035, 1053, 1143, 1182, 1266, 1377
BfmI CTRYAG 3 cut(s) 1020, 1071, 1707
BfuI GTATCC 3 cut(s) 474, 1349, 1439
BglI GCCNNNNNGGC 2 cut(s) 375, 1164
BisI GCNGC 9 cut(s) 564, 693, 842, 864, 964, 995, 1179, 1321, 1685
BlnI CCTAGG 1 cut(s) 28
BlsI GCNGC 9 cut(s) 565, 694, 843, 865, 965, 996, 1180, 1322, 1686
Bme1390I CCNGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
Bme18I GGWCC 4 cut(s) 179, 299, 800, 1066
BmeT110I CYCGRG 1 cut(s) 302
BmgBI CACGTC 1 cut(s) 535
BmgT120I GGNCC 6 cut(s) 179, 299, 367, 800, 1066, 1157
BmiI GGNNCC 5 cut(s) 9, 301, 1068, 1159, 1551
BmrFI CCNGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
BmrI ACTGGG 3 cut(s) 1317, 1332, 1648
BmsI GCATC 3 cut(s) 162, 745, 1139
BmtI GCTAGC 1 cut(s) 1185
BmuI ACTGGG 3 cut(s) 1317, 1332, 1648
BpiI GAAGAC 1 cut(s) 1021
BpmI CTGGAG 2 cut(s) 610, 1275
Bpu10I CCTNAGC 1 cut(s) 1128
BsaHI GRCGYC 1 cut(s) 65
BsaI GGTCTC 2 cut(s) 659, 828
BsaJI CCNNGG 7 cut(s) 28, 72, 175, 186, 210, 1153, 1718
BsaWI WCCGGW 4 cut(s) 351, 557, 659, 830
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bsc4I CCNNNNNNNGG 5 cut(s) 258, 452, 1343, 1468, 1559
Bse118I RCCGGY 1 cut(s) 351
Bse1I ACTGG 6 cut(s) 122, 263, 289, 1312, 1338, 1643
Bse3DI GCAATG 1 cut(s) 66
BseAI TCCGGA 1 cut(s) 830
BseBI CCWGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
BseDI CCNNGG 7 cut(s) 28, 72, 175, 186, 210, 1153, 1718
BseGI GGATG 6 cut(s) 293, 301, 442, 1426, 1458, 1630
BseLI CCNNNNNNNGG 5 cut(s) 258, 452, 1343, 1468, 1559
BseMI GCAATG 1 cut(s) 66
BseMII CTCAG 1 cut(s) 1523
BseNI ACTGG 6 cut(s) 122, 263, 289, 1312, 1338, 1643
BseRI GAGGAG 3 cut(s) 14, 32, 1692
BseSI GKGCMC 1 cut(s) 886
BseXI GCAGC 7 cut(s) 575, 853, 875, 950, 981, 1165, 1671
BsgI GTGCAG 2 cut(s) 383, 1424
BshFI GGCC 6 cut(s) 33, 77, 331, 369, 600, 1158
BshNI GGYRCC 2 cut(s) 7, 1549
BshTI ACCGGT 1 cut(s) 351
BsiHKAI GWGCWC 1 cut(s) 886
BsiHKCI CYCGRG 1 cut(s) 302
BsiSI CCGG 4 cut(s) 352, 558, 660, 831
BslFI GGGAC 3 cut(s) 285, 530, 1052
BslI CCNNNNNNNGG 5 cut(s) 258, 452, 1343, 1468, 1559
BsmAI GTCTC 5 cut(s) 198, 450, 659, 828, 1201
BsmFI GGGAC 3 cut(s) 285, 530, 1052
BsmI GAATGC 2 cut(s) 18, 267
BsnI GGCC 6 cut(s) 33, 77, 331, 369, 600, 1158
Bso31I GGTCTC 2 cut(s) 659, 828
BsoBI CYCGRG 1 cut(s) 302
Bsp1286I GDGCHC 1 cut(s) 886
Bsp13I TCCGGA 1 cut(s) 830
Bsp143I GATC 3 cut(s) 610, 1139, 1522
BspACI CCGC 4 cut(s) 293, 693, 1286, 1321
BspANI GGCC 6 cut(s) 33, 77, 331, 369, 600, 1158
BspCNI CTCAG 1 cut(s) 1524
BspEI TCCGGA 1 cut(s) 830
BspLI GGNNCC 5 cut(s) 9, 301, 1068, 1159, 1551
BspMAI CTGCAG 2 cut(s) 1024, 1711
BspOI GCTAGC 1 cut(s) 1185
BspPI GGATC 1 cut(s) 1517
BspT107I GGYRCC 2 cut(s) 7, 1549
BspTNI GGTCTC 2 cut(s) 659, 828
BsrBI CCGCTC 1 cut(s) 1323
BsrDI GCAATG 1 cut(s) 66
BsrFI RCCGGY 1 cut(s) 351
BsrI ACTGG 6 cut(s) 122, 263, 289, 1312, 1338, 1643
BssAI RCCGGY 1 cut(s) 351
BssECI CCNNGG 7 cut(s) 28, 72, 175, 186, 210, 1153, 1718
BssMI GATC 3 cut(s) 610, 1139, 1522
BssNI GRCGYC 1 cut(s) 65
BssT1I CCWWGG 4 cut(s) 28, 72, 186, 1153
Bst2UI CCWGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
Bst4CI ACNGT 7 cut(s) 160, 171, 361, 421, 640, 742, 1543
Bst6I CTCTTC 2 cut(s) 122, 1097
BstACI GRCGYC 1 cut(s) 65
BstAPI GCANNNNNTGC 1 cut(s) 869
BstC8I GCNNGC 6 cut(s) 393, 546, 870, 999, 1183, 1554
BstDEI CTNAG 5 cut(s) 410, 1128, 1350, 1503, 1532
BstENI CCTNNNNNAGG 1 cut(s) 1466
BstF5I GGATG 6 cut(s) 293, 301, 442, 1426, 1458, 1630
BstHHI GCGC 1 cut(s) 868
BstKTI GATC 3 cut(s) 613, 1142, 1525
BstMAI GTCTC 5 cut(s) 198, 450, 659, 828, 1201
BstMBI GATC 3 cut(s) 610, 1139, 1522
BstMWI GCNNNNNNNGC 7 cut(s) 56, 375, 869, 890, 994, 1047, 1164
BstNI CCWGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
BstNSI RCATGY 3 cut(s) 872, 1222, 1654
BstSCI CCNGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
BstSFI CTRYAG 3 cut(s) 1020, 1071, 1707
BstSLI GKGCMC 1 cut(s) 886
BstV1I GCAGC 7 cut(s) 575, 853, 875, 950, 981, 1165, 1671
BstV2I GAAGAC 1 cut(s) 1021
BstXI CCANNNNNNTGG 1 cut(s) 1602
BsuI GTATCC 3 cut(s) 474, 1349, 1439
BsuRI GGCC 6 cut(s) 33, 77, 331, 369, 600, 1158
BtrI CACGTC 1 cut(s) 535
BtsCI GGATG 6 cut(s) 293, 301, 442, 1426, 1458, 1630
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 9 cut(s) 129, 165, 256, 366, 636, 886, 1017, 1305, 1539
Cac8I GCNNGC 6 cut(s) 393, 546, 870, 999, 1183, 1554
CfoI GCGC 1 cut(s) 868
Cfr10I RCCGGY 1 cut(s) 351
Cfr13I GGNCC 6 cut(s) 179, 299, 367, 800, 1066, 1157
CseI GACGC 1 cut(s) 527
CsiI ACCWGGT 2 cut(s) 604, 802
Csp6I GTAC 1 cut(s) 1205
CspAI ACCGGT 1 cut(s) 351
CviAII CATG 9 cut(s) 98, 263, 405, 793, 859, 869, 1186, 1219, 1651
CviQI GTAC 1 cut(s) 1205
DdeI CTNAG 5 cut(s) 410, 1128, 1350, 1503, 1532
DpnI GATC 3 cut(s) 612, 1141, 1524
DpnII GATC 3 cut(s) 610, 1139, 1522
DrdI GACNNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 212
EaeI YGGCCR 2 cut(s) 75, 598
Eam1104I CTCTTC 2 cut(s) 122, 1097
EarI CTCTTC 2 cut(s) 122, 1097
EciI GGCGGA 1 cut(s) 308
Eco130I CCWWGG 4 cut(s) 28, 72, 186, 1153
Eco147I AGGCCT 1 cut(s) 33
Eco31I GGTCTC 2 cut(s) 659, 828
Eco47I GGWCC 4 cut(s) 179, 299, 800, 1066
Eco57I CTGAAG 2 cut(s) 39, 1027
Eco88I CYCGRG 1 cut(s) 302
EcoNI CCTNNNNNAGG 1 cut(s) 1466
EcoO109I RGGNCCY 2 cut(s) 1066, 1157
EcoRII CCWGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
EcoT14I CCWWGG 4 cut(s) 28, 72, 186, 1153
ErhI CCWWGG 4 cut(s) 28, 72, 186, 1153
FaeI CATG 9 cut(s) 101, 266, 408, 796, 862, 872, 1189, 1222, 1654
FalI AAGNNNNNCTT 2 cut(s) 480, 512
FaqI GGGAC 3 cut(s) 285, 530, 1052
FatI CATG 9 cut(s) 97, 262, 404, 792, 858, 868, 1185, 1218, 1650
FauI CCCGC 1 cut(s) 1293
FblI GTMKAC 1 cut(s) 68
Fnu4HI GCNGC 9 cut(s) 564, 693, 842, 864, 964, 995, 1179, 1321, 1685
FokI GGATG 6 cut(s) 300, 308, 429, 1413, 1445, 1637
Fsp4HI GCNGC 9 cut(s) 564, 693, 842, 864, 964, 995, 1179, 1321, 1685
FspBI CTAG 9 cut(s) 12, 29, 960, 1035, 1053, 1143, 1182, 1266, 1377
GlaI GCGC 1 cut(s) 867
GluI GCNGC 9 cut(s) 564, 693, 842, 864, 964, 995, 1179, 1321, 1685
GsuI CTGGAG 2 cut(s) 610, 1275
HaeIII GGCC 6 cut(s) 33, 77, 331, 369, 600, 1158
HapII CCGG 4 cut(s) 352, 558, 660, 831
HgaI GACGC 1 cut(s) 527
HhaI GCGC 1 cut(s) 868
Hin1I GRCGYC 1 cut(s) 65
Hin1II CATG 9 cut(s) 101, 266, 408, 796, 862, 872, 1189, 1222, 1654
Hin6I GCGC 1 cut(s) 866
HinP1I GCGC 1 cut(s) 866
HincII GTYRAC 1 cut(s) 69
HindII GTYRAC 1 cut(s) 69
HindIII AAGCTT 1 cut(s) 1233
HinfI GANTC 3 cut(s) 458, 656, 1113
HpaII CCGG 4 cut(s) 352, 558, 660, 831
HphI GGTGA 6 cut(s) 83, 241, 518, 620, 674, 769
Hpy166II GTNNAC 6 cut(s) 69, 196, 357, 884, 977, 1666
Hpy188I TCNGA 5 cut(s) 570, 810, 1046, 1533, 1577
Hpy188III TCNNGA 7 cut(s) 302, 488, 831, 849, 926, 1143, 1377
Hpy8I GTNNAC 6 cut(s) 69, 196, 357, 884, 977, 1666
Hpy99I CGWCG 3 cut(s) 70, 725, 1085
HpyAV CCTTC 2 cut(s) 368, 506
HpyCH4III ACNGT 7 cut(s) 160, 171, 361, 421, 640, 742, 1543
HpyCH4IV ACGT 3 cut(s) 65, 246, 534
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 375, 869, 890, 994, 1047, 1164
HpyF3I CTNAG 5 cut(s) 410, 1128, 1350, 1503, 1532
HpySE526I ACGT 3 cut(s) 65, 246, 534
Hsp92I GRCGYC 1 cut(s) 65
Hsp92II CATG 9 cut(s) 101, 266, 408, 796, 862, 872, 1189, 1222, 1654
HspAI GCGC 1 cut(s) 866
Kpn2I TCCGGA 1 cut(s) 830
Kzo9I GATC 3 cut(s) 610, 1139, 1522
LmnI GCTCC 8 cut(s) 428, 560, 571, 629, 898, 1038, 1328, 1681
Lsp1109I GCAGC 7 cut(s) 575, 853, 875, 950, 981, 1165, 1671
LweI GCATC 3 cut(s) 162, 745, 1139
MabI ACCWGGT 2 cut(s) 604, 802
MaeI CTAG 9 cut(s) 12, 29, 960, 1035, 1053, 1143, 1182, 1266, 1377
MaeII ACGT 3 cut(s) 65, 246, 534
MaeIII GTNAC 7 cut(s) 223, 247, 310, 341, 1392, 1411, 1616
MalI GATC 3 cut(s) 612, 1141, 1524
MbiI CCGCTC 1 cut(s) 1323
MboI GATC 3 cut(s) 610, 1139, 1522
MboII GAAGA 8 cut(s) 45, 139, 491, 1021, 1084, 1087, 1158, 1220
MfeI CAATTG 1 cut(s) 619
MhlI GDGCHC 1 cut(s) 886
MlsI TGGCCA 1 cut(s) 600
MluCI AATT 5 cut(s) 101, 619, 1224, 1295, 1431
MluNI TGGCCA 1 cut(s) 600
MlyI GAGTC 3 cut(s) 452, 650, 1107
Mox20I TGGCCA 1 cut(s) 600
MroI TCCGGA 1 cut(s) 830
MroXI GAANNNNTTC 2 cut(s) 495, 1091
MscI TGGCCA 1 cut(s) 600
MseI TTAA 3 cut(s) 219, 824, 1512
MslI CAYNNNNRTG 4 cut(s) 96, 158, 261, 1623
Msp20I TGGCCA 1 cut(s) 600
MspA1I CMGCKG 1 cut(s) 994
MspI CCGG 4 cut(s) 352, 558, 660, 831
MspR9I CCNGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
MunI CAATTG 1 cut(s) 619
Mva1269I GAATGC 2 cut(s) 18, 267
MvaI CCWGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
MwoI GCNNNNNNNGC 7 cut(s) 56, 375, 869, 890, 994, 1047, 1164
NdeII GATC 3 cut(s) 610, 1139, 1522
NheI GCTAGC 1 cut(s) 1181
NlaIII CATG 9 cut(s) 101, 266, 408, 796, 862, 872, 1189, 1222, 1654
NlaIV GGNNCC 5 cut(s) 9, 301, 1068, 1159, 1551
NmuCI GTSAC 4 cut(s) 223, 247, 1411, 1616
NspI RCATGY 3 cut(s) 872, 1222, 1654
PaeI GCATGC 1 cut(s) 872
PceI AGGCCT 1 cut(s) 33
PciI ACATGT 1 cut(s) 1218
PctI GAATGC 2 cut(s) 18, 267
PdmI GAANNNNTTC 2 cut(s) 495, 1091
PflFI GACNNNGTC 2 cut(s) 536, 804
PflMI CCANNNNNTGG 1 cut(s) 258
PfoI TCCNGGA 1 cut(s) 1252
PinAI ACCGGT 1 cut(s) 351
PkrI GCNGC 9 cut(s) 565, 694, 843, 865, 965, 996, 1180, 1322, 1686
PleI GAGTC 3 cut(s) 452, 650, 1107
PpsI GAGTC 3 cut(s) 452, 650, 1107
PpuMI RGGWCCY 1 cut(s) 1066
PscI ACATGT 1 cut(s) 1218
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
PspGI CCWGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
PspN4I GGNNCC 5 cut(s) 9, 301, 1068, 1159, 1551
PspPI GGNCC 6 cut(s) 179, 299, 367, 800, 1066, 1157
PspPPI RGGWCCY 1 cut(s) 1066
PstI CTGCAG 2 cut(s) 1024, 1711
PsyI GACNNNGTC 2 cut(s) 536, 804
PvuII CAGCTG 1 cut(s) 994
RsaI GTAC 1 cut(s) 1206
RsaNI GTAC 1 cut(s) 1205
RseI CAYNNNNRTG 4 cut(s) 96, 158, 261, 1623
SalI GTCGAC 1 cut(s) 67
SaqAI TTAA 3 cut(s) 219, 824, 1512
SatI GCNGC 9 cut(s) 564, 693, 842, 864, 964, 995, 1179, 1321, 1685
Sau3AI GATC 3 cut(s) 610, 1139, 1522
Sau96I GGNCC 6 cut(s) 179, 299, 367, 800, 1066, 1157
SchI GAGTC 3 cut(s) 452, 650, 1107
ScrFI CCNGG 8 cut(s) 177, 212, 333, 606, 804, 1254, 1596, 1661
SduI GDGCHC 1 cut(s) 886
SexAI ACCWGGT 2 cut(s) 604, 802
SfaNI GCATC 3 cut(s) 162, 745, 1139
SfcI CTRYAG 3 cut(s) 1020, 1071, 1707
SinI GGWCC 4 cut(s) 179, 299, 800, 1066
SmiMI CAYNNNNRTG 4 cut(s) 96, 158, 261, 1623
SpeI ACTAGT 1 cut(s) 1265
SphI GCATGC 1 cut(s) 872
Sse9I AATT 5 cut(s) 101, 619, 1224, 1295, 1431
SseBI AGGCCT 1 cut(s) 33
SsiI CCGC 4 cut(s) 293, 693, 1286, 1321
SspMI CTAG 9 cut(s) 12, 29, 960, 1035, 1053, 1143, 1182, 1266, 1377
StuI AGGCCT 1 cut(s) 33
StyD4I CCNGG 8 cut(s) 175, 210, 331, 604, 802, 1252, 1594, 1659
StyI CCWWGG 4 cut(s) 28, 72, 186, 1153
TaaI ACNGT 7 cut(s) 160, 171, 361, 421, 640, 742, 1543
TaiI ACGT 3 cut(s) 68, 249, 537
TaqI TCGA 6 cut(s) 68, 238, 850, 1080, 1138, 1299
TasI AATT 5 cut(s) 101, 619, 1224, 1295, 1431
TatI WGTACW 1 cut(s) 1204
TauI GCSGC 2 cut(s) 695, 1323
Tru1I TTAA 3 cut(s) 219, 824, 1512
Tru9I TTAA 3 cut(s) 219, 824, 1512
TscAI CASTG 9 cut(s) 129, 165, 263, 366, 643, 886, 1024, 1312, 1546
TseFI GTSAC 4 cut(s) 223, 247, 1411, 1616
TseI GCWGC 7 cut(s) 563, 841, 863, 963, 994, 1178, 1684
Tsp45I GTSAC 4 cut(s) 223, 247, 1411, 1616
TspDTI ATGAA 5 cut(s) 114, 431, 1202, 1424, 1619
TspGWI ACGGA 4 cut(s) 709, 928, 932, 1458
TspRI CASTG 9 cut(s) 129, 165, 263, 366, 643, 886, 1024, 1312, 1546
Tth111I GACNNNGTC 2 cut(s) 536, 804
Van91I CCANNNNNTGG 1 cut(s) 258
VneI GTGCAC 1 cut(s) 882
VpaK11BI GGWCC 4 cut(s) 179, 299, 800, 1066
XagI CCTNNNNNAGG 1 cut(s) 1466
XapI RAATTY 2 cut(s) 101, 1295
XbaI TCTAGA 2 cut(s) 1142, 1376
XceI RCATGY 3 cut(s) 872, 1222, 1654
XcmI CCANNNNNNNNNTGG 1 cut(s) 1160
XmaJI CCTAGG 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 68
XmnI GAANNNNTTC 2 cut(s) 495, 1091
XspI CTAG 9 cut(s) 12, 29, 960, 1035, 1053, 1143, 1182, 1266, 1377
ZraI GACGTC 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.