Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001265

Physical Location & Seq

Genomic Coordinates Reverse (-)

26568702 .. 26571531

Gene Structure 2830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1159400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGAGGCACTCAACGCCATTTTCGTCAACAAGATTCGCTTCACGTTATGCCTTTTCGGTCTTTGCCTTCTCGTGGCGTCATCGACAATGTCCTTGGCAGAACCCCAAATTCACAAGCATGAGTTTGTTGTTCAAGCAACACCAGTGAAGAGGCTGTGCAAAACCCAAAACTCCATCACAGTGAATGGACAGCTCCCTGGACCAACCTTGGAAGTAAACAATGGTGACACTCTTGTCGTCAAAGTCACCAACAGAGCTCAATACAACGTCACCATCCACTGGCATGGGATTAGGCAAATGAGAACTGGATGGGCAGATGGGCCAGAATTTGTGACTCAGTGCCCGATTAGGCCAGGAGGGAGCTACACCTACCGCTTTACAATTCAAGGGCAAGAAGGTACTCTGTGGTGGCATGCTCACAGCTCATGGCTTAGAGCCACCGTTTACGGAGCACTCATCATTCATCCTAAACAAGGAGACTCCTACCCCTTCACTAAACCGAAAAGTGAAACAACCCTTCTTCTCGGTGAATGGTGGAACGCTAACCCTATCGATGTCTTGAGGCAGGCGACTATGACAGGAGCAGCTCCAAATGTTTCTGATGCATACACCATCAATGGTCAACCTGGCGATCTTTACAACTGCTCAAGCCAAGACACTGTCATAGTTCCTATAGACTCCGGCGAGACCAACCTTCTTAGAGTCATCAACGCTGCACTCAACCAACCTCTTTTCTTCTCCGTGGCCAACCACAAGCTCACCGTTGTTAGTGCTGATGCCTCCTACACCAAACCTTTCACTACCACGGTTCTCATGCTAGGGCCTGGGCAGACCACTGATGTTTTAATCACCGGTGACCAGTCACCAGCCCGGTACTACTTGGCGGCGAGTGCTTATTTCAGCGCGCAAAATGCAGCATTCGACAACACCACCACCACCGCCATTCTTGAATACAAGTCTGCCCCTTGCAGCCCCAATTGCAAAAACAGTTCAGCAGCCAAACCAATTATGGCACAACTCCCTGCTTTCAATGACACAAACACTGCTTCTGCTTTCACCAAGAGTTTCAGAAGTCCAAGAAAAGTTGAAGTCCCAACTGAAATCGATGAAAATCTCTTCTTCACAATTGGTCTTGGACTCAACAACTGCCCGAAAAATTTTGGATCCCAAAGGTGCCAAGGCCCAAATGGGACACGCTTCACAGCCAGCATGAACAATGTGTCCTTCGTGCTTCCAAACAACATTTCAATCCTTCAGGCATACCTACAAAACATCCCTGGAGTTTTCACTGCAGATTTTCCAGCAAACCCTCCGACGAAATTCGACTACACTGGCAATGTGAGTCGCTCTCTTTGGCAACCAATGTCAGGCACTAGAGGATACAAGTTGAAGTATGGATCAAGGGTGCAGGTTGTGCTGCAGGACACAAGCATCGTCACACCAGAAAACCATCCTATCCATCTTCACGGATACGATTTTTACATCCTTGCTGAGGGTTTTGGAAATTTCAATGCCCAGACTGATACCAAAAAGTTCAACCTTATTGATCCACCTCTGAGGAACACAGTGGCAGTGCCTGCGAATGGATGGGCAGTCATTCGATTTGTCGCTGACAATCCAGGTGCATGGATAATGCATTGTCACTTGGATGTCCACATCAACTGGGGTTTGGCCATGGTGTTCTTGGTGGACAATGGAGTTGGGGCACTGCAGTCAGTCGAGCAACCACCGGTGGATCTGCCTCTTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

584

Amino Acids

64.0

Weight (kDa)

7.59

Isoelectric Point (pI)

34.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	44 - 158	4e-45	Multicopper oxidase
Cu-oxidase	PF00394	170 - 320	9.6e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	432 - 565	2.5e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001265)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40370 AT5G05390
fragaria_vesca	FvH4_7g07750 FvH4_7g07800 FvH4_7g25330
malus_domestica	MD01G1158900.v1.1 MD01G1159400.v1.1 MD07G1227800.v1.1 MD07G1227900.v1.1
prunus_persica	Prupe.2G257400_v2.0.a1
pyrus_communis	pycom01g17560 pycom01g17570 pycom07g20630
rosa_chinensis	RchiOBHm_Chr1g0341691 RchiOBHm_Chr1g0341781 RchiOBHm_Chr1g0341901 RchiOBHm_Chr1g0342021 RchiOBHm_Chr1g0342201 RchiOBHm_Chr1g0342281 RchiOBHm_Chr1g0371241
rosa_laevigata	RLG00000026977 RLG00000029124 RLG00000029139 RLG00000029144 RLG00000029148
rosa_multiflora	Rmu_co8157628.1_g000001 Rmu_sc0001400.1_g000014 Rmu_sc0001978.1_g000003 Rmu_sc0002161.1_g000024 Rmu_sc0002161.1_g000035 Rmu_sc0004658.1_g000003
rosa_roxburghii	Rroxscaffold_4G00285850 Rroxscaffold_4G00312320 Rroxscaffold_4G00312390 Rroxscaffold_4G00312700 Rroxscaffold_4G00312750 Rroxscaffold_4G00312770 Rroxscaffold_4G00312800
rosa_rugosa	Rorug01G0152200.1 Rorug01G0152500.1 Rorug01G0153200.1 Rorug01G0153700.1 Rorug01G0362300
rosa_samantha	Rh1BG133800 Rh1BG134300 Rh1BG134600 Rh1BG137000 Rh1BG335900 Rh1CG155200 Rh1CG157900 Rh1CG349300
rosa_wichuraiana	Rw1G013920 Rw1G013930 Rw1G013990 Rw1G032750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	233
Acc36I	ACCTGC	1 cut(s)	1399
AccB1I	GGYRCC	1 cut(s)	1173
AccB7I	CCANNNNNTGG	1 cut(s)	279
AccII	CGCG	1 cut(s)	905
AciI	CCGC	3 cut(s)	373, 884, 939
AclWI	GGATC	5 cut(s)	1158, 1171, 1405, 1541, 1743
AcoI	YGGCCR	2 cut(s)	744, 1671
AcsI	RAATTY	5 cut(s)	108, 326, 1156, 1319, 1504
AcuI	CTGAAG	1 cut(s)	1238
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	2 cut(s)	400, 875
AfiI	CCNNNNNNNGG	6 cut(s)	73, 279, 473, 1367, 1492, 1583
AgeI	ACCGGT	2 cut(s)	851, 1729
AgsI	TTSAA	9 cut(s)	134, 386, 950, 1030, 1088, 1248, 1390, 1510, 1537
AjnI	CCWGG	6 cut(s)	196, 352, 625, 823, 1276, 1618
AjuI	GAANNNNNNNTTGG	2 cut(s)	1228, 1260
AloI	GAACNNNNNNTCC	2 cut(s)	1205, 1237
AluBI	AGCT	6 cut(s)	193, 257, 363, 423, 587, 757
AluI	AGCT	6 cut(s)	193, 257, 363, 423, 587, 757
Alw21I	GWGCWC	2 cut(s)	259, 454
Alw26I	GTCTC	2 cut(s)	471, 680
AlwI	GGATC	5 cut(s)	1158, 1171, 1405, 1541, 1743
AlwNI	CAGNNNCTG	1 cut(s)	1577
AoxI	GGCC	6 cut(s)	320, 350, 744, 821, 1180, 1671
ApeKI	GCWGC	6 cut(s)	584, 713, 914, 969, 995, 1417
ApoI	RAATTY	5 cut(s)	108, 326, 1156, 1319, 1504
AsiGI	ACCGGT	2 cut(s)	851, 1729
AspLEI	GCGC	2 cut(s)	905, 907
AspS9I	GGNCC	4 cut(s)	200, 320, 821, 1181
AsuC2I	CCSGG	1 cut(s)	871
AsuHPI	GGTGA	9 cut(s)	236, 238, 262, 539, 751, 841, 855, 866, 1048
AvaII	GGWCC	1 cut(s)	200
BaeGI	GKGCMC	2 cut(s)	344, 1708
BalI	TGGCCA	2 cut(s)	746, 1673
BamHI	GGATCC	1 cut(s)	1163
BanI	GGYRCC	1 cut(s)	1173
BanII	GRGCYC	1 cut(s)	259
BauI	CACGAG	1 cut(s)	71
Bbv12I	GWGCWC	2 cut(s)	259, 454
BbvCI	CCTCAGC	1 cut(s)	1491
BbvI	GCAGC	6 cut(s)	596, 700, 926, 981, 1007, 1404
BccI	CCATC	8 cut(s)	182, 281, 303, 311, 620, 1458, 1467, 1581
BciT130I	CCWGG	6 cut(s)	198, 354, 627, 825, 1278, 1620
BciVI	GTATCC	2 cut(s)	1373, 1463
BcnI	CCSGG	1 cut(s)	871
BcoDI	GTCTC	2 cut(s)	471, 680
BfaI	CTAG	2 cut(s)	818, 1374
BfmI	CTRYAG	4 cut(s)	672, 1290, 1418, 1709
BfuAI	ACCTGC	1 cut(s)	1399
BfuI	GTATCC	2 cut(s)	1373, 1463
BisI	GCNGC	7 cut(s)	585, 714, 885, 915, 970, 996, 1418
BlsI	GCNGC	7 cut(s)	586, 715, 886, 916, 971, 997, 1419
Bme1390I	CCNGG	7 cut(s)	198, 354, 627, 825, 871, 1278, 1620
Bme18I	GGWCC	1 cut(s)	200
BmgT120I	GGNCC	4 cut(s)	200, 320, 821, 1181
BmiI	GGNNCC	2 cut(s)	1165, 1175
BmrFI	CCNGG	7 cut(s)	198, 354, 627, 825, 871, 1278, 1620
BmrI	ACTGGG	1 cut(s)	1672
BmsI	GCATC	3 cut(s)	592, 766, 1440
BmuI	ACTGGG	1 cut(s)	1672
BplI	GAGNNNNNCTC	2 cut(s)	1333, 1365
BpmI	CTGGAG	1 cut(s)	1299
Bpu10I	CCTNAGC	1 cut(s)	1491
BpuEI	CTTGAG	2 cut(s)	580, 631
BpuMI	CCSGG	1 cut(s)	871
Bsa29I	ATCGAT	2 cut(s)	552, 1104
BsaBI	GATNNNNATC	1 cut(s)	1110
BsaHI	GRCGYC	1 cut(s)	77
BsaI	GGTCTC	1 cut(s)	680
BsaJI	CCNNGG	9 cut(s)	93, 196, 207, 741, 804, 824, 1177, 1276, 1674
BsaWI	WCCGGW	2 cut(s)	851, 1729
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 279, 473, 1367, 1492, 1583
Bse118I	RCCGGY	2 cut(s)	851, 1729
Bse1I	ACTGG	6 cut(s)	143, 284, 310, 859, 1336, 1667
Bse3DI	GCAATG	1 cut(s)	1342
Bse8I	GATNNNNATC	1 cut(s)	1110
BseBI	CCWGG	6 cut(s)	198, 354, 627, 825, 1278, 1620
BseCI	ATCGAT	2 cut(s)	552, 1104
BseDI	CCNNGG	9 cut(s)	93, 196, 207, 741, 804, 824, 1177, 1276, 1674
BseGI	GGATG	8 cut(s)	273, 314, 463, 1272, 1450, 1482, 1592, 1654
BseJI	GATNNNNATC	1 cut(s)	1110
BseLI	CCNNNNNNNGG	6 cut(s)	73, 279, 473, 1367, 1492, 1583
BseMI	GCAATG	1 cut(s)	1342
BseMII	CTCAG	3 cut(s)	350, 1482, 1547
BseNI	ACTGG	6 cut(s)	143, 284, 310, 859, 1336, 1667
BsePI	GCGCGC	1 cut(s)	903
BseSI	GKGCMC	2 cut(s)	344, 1708
BseXI	GCAGC	6 cut(s)	596, 700, 926, 981, 1007, 1404
BsgI	GTGCAG	2 cut(s)	699, 1427
Bsh1236I	CGCG	1 cut(s)	905
BshFI	GGCC	6 cut(s)	322, 352, 746, 823, 1182, 1673
BshNI	GGYRCC	1 cut(s)	1173
BshTI	ACCGGT	2 cut(s)	851, 1729
BshVI	ATCGAT	2 cut(s)	552, 1104
BsiHKAI	GWGCWC	2 cut(s)	259, 454
BsiSI	CCGG	4 cut(s)	681, 852, 871, 1730
BslFI	GGGAC	2 cut(s)	1076, 1204
BslI	CCNNNNNNNGG	6 cut(s)	73, 279, 473, 1367, 1492, 1583
BsmAI	GTCTC	2 cut(s)	471, 680
BsmFI	GGGAC	2 cut(s)	1076, 1204
BsmI	GAATGC	1 cut(s)	917
BsnI	GGCC	6 cut(s)	322, 352, 746, 823, 1182, 1673
Bso31I	GGTCTC	1 cut(s)	680
Bsp1286I	GDGCHC	4 cut(s)	259, 344, 454, 1708
Bsp143I	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
Bsp19I	CCATGG	1 cut(s)	1674
BspACI	CCGC	3 cut(s)	373, 884, 939
BspANI	GGCC	6 cut(s)	322, 352, 746, 823, 1182, 1673
BspCNI	CTCAG	3 cut(s)	349, 1483, 1548
BspDI	ATCGAT	2 cut(s)	552, 1104
BspFNI	CGCG	1 cut(s)	905
BspLI	GGNNCC	2 cut(s)	1165, 1175
BspMAI	CTGCAG	3 cut(s)	1294, 1422, 1713
BspMI	ACCTGC	1 cut(s)	1399
BspPI	GGATC	5 cut(s)	1158, 1171, 1405, 1541, 1743
BspT107I	GGYRCC	1 cut(s)	1173
BspTNI	GGTCTC	1 cut(s)	680
BsrDI	GCAATG	1 cut(s)	1342
BsrFI	RCCGGY	2 cut(s)	851, 1729
BsrI	ACTGG	6 cut(s)	143, 284, 310, 859, 1336, 1667
BssAI	RCCGGY	2 cut(s)	851, 1729
BssECI	CCNNGG	9 cut(s)	93, 196, 207, 741, 804, 824, 1177, 1276, 1674
BssHII	GCGCGC	1 cut(s)	903
BssMI	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
BssNI	GRCGYC	1 cut(s)	77
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	4 cut(s)	93, 207, 1177, 1674
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	6 cut(s)	198, 354, 627, 825, 1278, 1620
Bst4CI	ACNGT	7 cut(s)	181, 442, 661, 763, 808, 989, 1567
Bst6I	CTCTTC	2 cut(s)	143, 1121
BstACI	GRCGYC	1 cut(s)	77
BstAPI	GCANNNNNTGC	2 cut(s)	1414, 1577
BstC8I	GCNNGC	5 cut(s)	414, 567, 905, 1207, 1578
BstDEI	CTNAG	5 cut(s)	336, 431, 698, 1491, 1556
BstDSI	CCRYGG	3 cut(s)	741, 804, 1674
BstEII	GGTNACC	1 cut(s)	854
BstENI	CCTNNNNNAGG	2 cut(s)	471, 1490
BstF5I	GGATG	8 cut(s)	273, 314, 463, 1272, 1450, 1482, 1592, 1654
BstFNI	CGCG	1 cut(s)	905
BstHHI	GCGC	2 cut(s)	905, 907
BstKTI	GATC	5 cut(s)	634, 1166, 1400, 1549, 1738
BstMAI	GTCTC	2 cut(s)	471, 680
BstMBI	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 890, 911, 978, 1414, 1577
BstNI	CCWGG	6 cut(s)	198, 354, 627, 825, 1278, 1620
BstNSI	RCATGY	1 cut(s)	416
BstPI	GGTNACC	1 cut(s)	854
BstSCI	CCNGG	7 cut(s)	196, 352, 625, 823, 869, 1276, 1618
BstSFI	CTRYAG	4 cut(s)	672, 1290, 1418, 1709
BstSLI	GKGCMC	2 cut(s)	344, 1708
BstUI	CGCG	1 cut(s)	905
BstV1I	GCAGC	6 cut(s)	596, 700, 926, 981, 1007, 1404
BstX2I	RGATCY	2 cut(s)	1163, 1735
BstXI	CCANNNNNNTGG	2 cut(s)	284, 1626
BstYI	RGATCY	2 cut(s)	1163, 1735
Bsu15I	ATCGAT	2 cut(s)	552, 1104
BsuI	GTATCC	2 cut(s)	1373, 1463
BsuRI	GGCC	6 cut(s)	322, 352, 746, 823, 1182, 1673
BsuTUI	ATCGAT	2 cut(s)	552, 1104
BtgI	CCRYGG	3 cut(s)	741, 804, 1674
BtsCI	GGATG	8 cut(s)	273, 314, 463, 1272, 1450, 1482, 1592, 1654
BtsI	GCAGTG	4 cut(s)	1041, 1287, 1578, 1706
BveI	ACCTGC	1 cut(s)	1399
Cac8I	GCNNGC	5 cut(s)	414, 567, 905, 1207, 1578
CaiI	CAGNNNCTG	1 cut(s)	1577
CfoI	GCGC	2 cut(s)	905, 907
Cfr10I	RCCGGY	2 cut(s)	851, 1729
Cfr13I	GGNCC	4 cut(s)	200, 320, 821, 1181
ClaI	ATCGAT	2 cut(s)	552, 1104
CseI	GACGC	1 cut(s)	66
Csp6I	GTAC	2 cut(s)	399, 874
CspAI	ACCGGT	2 cut(s)	851, 1729
CviAII	CATG	8 cut(s)	119, 284, 413, 426, 814, 1210, 1626, 1675
CviQI	GTAC	2 cut(s)	399, 874
DdeI	CTNAG	5 cut(s)	336, 431, 698, 1491, 1556
DpnI	GATC	5 cut(s)	633, 1165, 1399, 1548, 1737
DpnII	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
DrdI	GACNNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	233
EaeI	YGGCCR	2 cut(s)	744, 1671
Eam1104I	CTCTTC	2 cut(s)	143, 1121
EarI	CTCTTC	2 cut(s)	143, 1121
Ecl136II	GAGCTC	1 cut(s)	257
Eco130I	CCWWGG	4 cut(s)	93, 207, 1177, 1674
Eco24I	GRGCYC	1 cut(s)	259
Eco31I	GGTCTC	1 cut(s)	680
Eco47I	GGWCC	1 cut(s)	200
Eco53kI	GAGCTC	1 cut(s)	257
Eco57I	CTGAAG	1 cut(s)	1238
Eco91I	GGTNACC	1 cut(s)	854
EcoICRI	GAGCTC	1 cut(s)	257
EcoNI	CCTNNNNNAGG	2 cut(s)	471, 1490
EcoO109I	RGGNCCY	1 cut(s)	821
EcoO65I	GGTNACC	1 cut(s)	854
EcoRII	CCWGG	6 cut(s)	196, 352, 625, 823, 1276, 1618
EcoT14I	CCWWGG	4 cut(s)	93, 207, 1177, 1674
EcoT22I	ATGCAT	2 cut(s)	607, 1638
EcoT38I	GRGCYC	1 cut(s)	259
ErhI	CCWWGG	4 cut(s)	93, 207, 1177, 1674
FaeI	CATG	8 cut(s)	122, 287, 416, 429, 817, 1213, 1629, 1678
FalI	AAGNNNNNCTT	2 cut(s)	23, 55
FaqI	GGGAC	2 cut(s)	1076, 1204
FatI	CATG	8 cut(s)	118, 283, 412, 425, 813, 1209, 1625, 1674
Fnu4HI	GCNGC	7 cut(s)	585, 714, 885, 915, 970, 996, 1418
FokI	GGATG	8 cut(s)	260, 321, 450, 1259, 1437, 1469, 1599, 1661
FriOI	GRGCYC	1 cut(s)	259
Fsp4HI	GCNGC	7 cut(s)	585, 714, 885, 915, 970, 996, 1418
FspBI	CTAG	2 cut(s)	818, 1374
GlaI	GCGC	2 cut(s)	904, 906
GluI	GCNGC	7 cut(s)	585, 714, 885, 915, 970, 996, 1418
GsuI	CTGGAG	1 cut(s)	1299
HaeIII	GGCC	6 cut(s)	322, 352, 746, 823, 1182, 1673
HapII	CCGG	4 cut(s)	681, 852, 871, 1730
HgaI	GACGC	1 cut(s)	66
HhaI	GCGC	2 cut(s)	905, 907
Hin1I	GRCGYC	1 cut(s)	77
Hin1II	CATG	8 cut(s)	122, 287, 416, 429, 817, 1213, 1629, 1678
Hin6I	GCGC	2 cut(s)	903, 905
HinP1I	GCGC	2 cut(s)	903, 905
HincII	GTYRAC	2 cut(s)	28, 623
HindII	GTYRAC	2 cut(s)	28, 623
HinfI	GANTC	7 cut(s)	34, 334, 479, 677, 702, 1137, 1342
HpaII	CCGG	4 cut(s)	681, 852, 871, 1730
HphI	GGTGA	9 cut(s)	236, 238, 262, 539, 751, 841, 855, 866, 1048
Hpy166II	GTNNAC	6 cut(s)	28, 217, 445, 623, 1654, 1690
Hpy188I	TCNGA	4 cut(s)	601, 1070, 1314, 1557
Hpy188III	TCNNGA	2 cut(s)	559, 947
Hpy8I	GTNNAC	6 cut(s)	28, 217, 445, 623, 1654, 1690
Hpy99I	CGWCG	1 cut(s)	1318
HpyAV	CCTTC	7 cut(s)	77, 389, 499, 527, 704, 1234, 1262
HpyCH4III	ACNGT	7 cut(s)	181, 442, 661, 763, 808, 989, 1567
HpyCH4IV	ACGT	2 cut(s)	44, 267
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 890, 911, 978, 1414, 1577
HpyF3I	CTNAG	5 cut(s)	336, 431, 698, 1491, 1556
HpySE526I	ACGT	2 cut(s)	44, 267
Hsp92I	GRCGYC	1 cut(s)	77
Hsp92II	CATG	8 cut(s)	122, 287, 416, 429, 817, 1213, 1629, 1678
HspAI	GCGC	2 cut(s)	903, 905
Kzo9I	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
LmnI	GCTCC	5 cut(s)	198, 360, 449, 581, 592
Lsp1109I	GCAGC	6 cut(s)	596, 700, 926, 981, 1007, 1404
LweI	GCATC	3 cut(s)	592, 766, 1440
MaeI	CTAG	2 cut(s)	818, 1374
MaeII	ACGT	2 cut(s)	44, 267
MaeIII	GTNAC	8 cut(s)	224, 244, 268, 331, 854, 861, 1435, 1640
MalI	GATC	5 cut(s)	633, 1165, 1399, 1548, 1737
MboI	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
MboII	GAAGA	6 cut(s)	160, 512, 727, 1108, 1111, 1454
MfeI	CAATTG	2 cut(s)	976, 1125
MflI	RGATCY	2 cut(s)	1163, 1735
MhlI	GDGCHC	4 cut(s)	259, 344, 454, 1708
MlsI	TGGCCA	2 cut(s)	746, 1673
MluCI	AATT	9 cut(s)	108, 326, 381, 976, 1005, 1125, 1156, 1319, 1504
MluNI	TGGCCA	2 cut(s)	746, 1673
MlyI	GAGTC	6 cut(s)	328, 473, 671, 711, 1131, 1351
MmeI	TCCRAC	1 cut(s)	1337
Mox20I	TGGCCA	2 cut(s)	746, 1673
Mph1103I	ATGCAT	2 cut(s)	607, 1638
MscI	TGGCCA	2 cut(s)	746, 1673
MseI	TTAA	2 cut(s)	845, 1750
MslI	CAYNNNNRTG	4 cut(s)	117, 179, 282, 1647
Msp20I	TGGCCA	2 cut(s)	746, 1673
MspI	CCGG	4 cut(s)	681, 852, 871, 1730
MspR9I	CCNGG	7 cut(s)	198, 354, 627, 825, 871, 1278, 1620
MunI	CAATTG	2 cut(s)	976, 1125
Mva1269I	GAATGC	1 cut(s)	917
MvaI	CCWGG	6 cut(s)	198, 354, 627, 825, 1278, 1620
MvnI	CGCG	1 cut(s)	905
MwoI	GCNNNNNNNGC	6 cut(s)	14, 890, 911, 978, 1414, 1577
NciI	CCSGG	1 cut(s)	871
NcoI	CCATGG	1 cut(s)	1674
NdeII	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
NlaIII	CATG	8 cut(s)	122, 287, 416, 429, 817, 1213, 1629, 1678
NlaIV	GGNNCC	2 cut(s)	1165, 1175
NmuCI	GTSAC	8 cut(s)	224, 244, 268, 331, 854, 861, 1435, 1640
NsiI	ATGCAT	2 cut(s)	607, 1638
NspI	RCATGY	1 cut(s)	416
PaeI	GCATGC	1 cut(s)	416
PauI	GCGCGC	1 cut(s)	903
PcsI	WCGNNNNNNNCGW	1 cut(s)	21
PctI	GAATGC	1 cut(s)	917
PfeI	GAWTC	1 cut(s)	34
PflFI	GACNNNGTC	2 cut(s)	88, 659
PflMI	CCANNNNNTGG	1 cut(s)	279
PinAI	ACCGGT	2 cut(s)	851, 1729
PkrI	GCNGC	7 cut(s)	586, 715, 886, 916, 971, 997, 1419
PleI	GAGTC	6 cut(s)	328, 473, 671, 710, 1131, 1350
PpsI	GAGTC	6 cut(s)	328, 473, 671, 710, 1131, 1350
Psp124BI	GAGCTC	1 cut(s)	259
Psp6I	CCWGG	6 cut(s)	196, 352, 625, 823, 1276, 1618
PspEI	GGTNACC	1 cut(s)	854
PspGI	CCWGG	6 cut(s)	196, 352, 625, 823, 1276, 1618
PspN4I	GGNNCC	2 cut(s)	1165, 1175
PspPI	GGNCC	4 cut(s)	200, 320, 821, 1181
PstI	CTGCAG	3 cut(s)	1294, 1422, 1713
PstNI	CAGNNNCTG	1 cut(s)	1577
PsuI	RGATCY	2 cut(s)	1163, 1735
PsyI	GACNNNGTC	2 cut(s)	88, 659
PteI	GCGCGC	1 cut(s)	903
RsaI	GTAC	2 cut(s)	400, 875
RsaNI	GTAC	2 cut(s)	399, 874
RseI	CAYNNNNRTG	4 cut(s)	117, 179, 282, 1647
SacI	GAGCTC	1 cut(s)	259
SaqAI	TTAA	2 cut(s)	845, 1750
SatI	GCNGC	7 cut(s)	585, 714, 885, 915, 970, 996, 1418
Sau3AI	GATC	5 cut(s)	631, 1163, 1397, 1546, 1735
Sau96I	GGNCC	4 cut(s)	200, 320, 821, 1181
SchI	GAGTC	6 cut(s)	328, 473, 671, 711, 1131, 1351
ScrFI	CCNGG	7 cut(s)	198, 354, 627, 825, 871, 1278, 1620
SduI	GDGCHC	4 cut(s)	259, 344, 454, 1708
SfaNI	GCATC	3 cut(s)	592, 766, 1440
SfcI	CTRYAG	4 cut(s)	672, 1290, 1418, 1709
SgrAI	CRCCGGYG	2 cut(s)	851, 1729
SinI	GGWCC	1 cut(s)	200
SmiMI	CAYNNNNRTG	4 cut(s)	117, 179, 282, 1647
SmlI	CTYRAG	2 cut(s)	559, 646
SmoI	CTYRAG	2 cut(s)	559, 646
SphI	GCATGC	1 cut(s)	416
Sse9I	AATT	9 cut(s)	108, 326, 381, 976, 1005, 1125, 1156, 1319, 1504
SsiI	CCGC	3 cut(s)	373, 884, 939
SspMI	CTAG	2 cut(s)	818, 1374
SstI	GAGCTC	1 cut(s)	259
StyD4I	CCNGG	7 cut(s)	196, 352, 625, 823, 869, 1276, 1618
StyI	CCWWGG	4 cut(s)	93, 207, 1177, 1674
TaaI	ACNGT	7 cut(s)	181, 442, 661, 763, 808, 989, 1567
TaiI	ACGT	2 cut(s)	47, 270
TaqI	TCGA	7 cut(s)	83, 552, 921, 1104, 1323, 1600, 1719
TaqII	GACCGA	1 cut(s)	47
TasI	AATT	9 cut(s)	108, 326, 381, 976, 1005, 1125, 1156, 1319, 1504
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	1 cut(s)	34
Tru1I	TTAA	2 cut(s)	845, 1750
Tru9I	TTAA	2 cut(s)	845, 1750
TseFI	GTSAC	8 cut(s)	224, 244, 268, 331, 854, 861, 1435, 1640
TseI	GCWGC	6 cut(s)	584, 713, 914, 969, 995, 1417
Tsp45I	GTSAC	8 cut(s)	224, 244, 268, 331, 854, 861, 1435, 1640
TspDTI	ATGAA	3 cut(s)	452, 1122, 1226
TspGWI	ACGGA	3 cut(s)	462, 730, 1482
Tth111I	GACNNNGTC	2 cut(s)	88, 659
Van91I	CCANNNNNTGG	1 cut(s)	279
VpaK11BI	GGWCC	1 cut(s)	200
XagI	CCTNNNNNAGG	2 cut(s)	471, 1490
XapI	RAATTY	5 cut(s)	108, 326, 1156, 1319, 1504
XceI	RCATGY	1 cut(s)	416
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1006, 1184, 1681
XspI	CTAG	2 cut(s)	818, 1374
Zsp2I	ATGCAT	2 cut(s)	607, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.