Rh1BG133800

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0001265
Physical Location & Seq
Forward (+)
22384947 .. 22386920
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG133800.1

Sequence Viewer

Length: 1647 bp
ATGGAACTAATATTGATCCAAGCAACACCAGTGAAGAGGCTGTGCAAAACCCACAACACCATCACAGTGAATGGACAGTTTCCAGGACCAACCTTGGAAGTAAACAATGGCGACACTCTTGTCGTCAAAGTCACTAACAAAGCTCGATATAACGTCACCATTCACTGGCATGGCATTCGGCAAATGAGAACTGGATGGGCGGATGGGCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGGAGTTACACCTATCGGTTTACAGTTCAGGGTCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCAAAACAAGGAGACTCGTATCCATTCACTAAACCAAATCGTCAAGCAACACTTCTTCTTGGTGAGTGGTGGGATGGTAACCCTATTGACGTGGTGAGGAGGGCGACTCGCACAGGAGCAGCTCCAAATGTTTCTAACGCATATACCATTAACGGTCAACCCGGAGATCTTTACAGTTGCTCCAGCAAAGGCACCGTCATAGTTCCAATAGACTCTGGTGAGACCAACCTACTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCCTCGTACACCAAGCCTTTCACCACCAAAGTTCTCATGCTAGGCCCAGGCCAGACTACTGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCAAGTGCCTATTTCAGTGCACAAAATGCTCCGTTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTTCGTTGCAACGCTACTAGTTGCAACAAGGGTAAAACAGTAATTAAACCCATAATGCCAAAGCTGCCAGCTTTCAATGACACGAACACCGCATCAGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAACGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGCCTCGGACTCAACAAATGCCCTAAGCACTTTCGATCTAGAAGGTGCCAAGGCCCCAATGGCACACGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACATGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCACGGAAGTTTGATTACACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGCATACAAGTTGAAGTACGGGTCTAGGGTGCAGGTGGTGTTACAAGACACAAGTATTGTCACACCCGAGAACCATCCCATTCATCTCCACGGTTATGATTTCTACATCCTTGCAGAGGGTTTTGGAAATTTCAACCCCAAGACCGATACTAAAAAGTTTAACCTTGGTGATCCACCTCTAAGGAACACGGTCGCGGTGCCCGCGAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGGTGATGCATTGTCACTTGGATGTTCATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAATCAATAGAGCCACCGCCAGCGGATTATCCTCTGTGTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0042221 GO:0046688 GO:0050896 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

548

Amino Acids

60.54

Weight (kDa)

9.22

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 6 - 120 1.3e-45 Multicopper oxidase
Cu-oxidase PF00394 133 - 281 1.9e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 396 - 529 8.7e-43 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1291
AasI GACNNNNNNGTC 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 1291
AccB1I GGYRCC 3 cut(s) 542, 1065, 1465
AccB7I CCANNNNNTGG 1 cut(s) 165
AccBSI CCGCTC 1 cut(s) 1239
AccII CGCG 2 cut(s) 1463, 1472
AclWI GGATC 2 cut(s) 10, 1433
AcoI YGGCCR 1 cut(s) 1563
AcsI RAATTY 1 cut(s) 1396
AcuI CTGAAG 1 cut(s) 943
AfaI GTAC 3 cut(s) 286, 671, 1286
AfiI CCNNNNNNNGG 5 cut(s) 165, 359, 1259, 1384, 1475
AflIII ACRYGT 1 cut(s) 1134
AgsI TTSAA 4 cut(s) 836, 922, 1282, 1402
AhlI ACTAGT 2 cut(s) 863, 1181
AjiI CACGTC 1 cut(s) 442
AjnI CCWGG 5 cut(s) 82, 238, 709, 1168, 1510
AluBI AGCT 9 cut(s) 143, 309, 473, 910, 917, 957, 1151, 1502, 1600
AluI AGCT 9 cut(s) 143, 309, 473, 910, 917, 957, 1151, 1502, 1600
Alw21I GWGCWC 2 cut(s) 340, 793
Alw26I GTCTC 3 cut(s) 357, 566, 1117
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 2 cut(s) 10, 1433
Ama87I CYCGRG 2 cut(s) 209, 1334
AoxI GGCC 6 cut(s) 206, 706, 712, 1021, 1072, 1563
ApaI GGGCCC 1 cut(s) 210
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 3 cut(s) 470, 910, 1600
ApoI RAATTY 1 cut(s) 1396
ArsI GACNNNNNNTTYG 4 cut(s) 531, 563, 1121, 1153
Asp700I GAANNNNTTC 1 cut(s) 1007
AspS9I GGNCC 6 cut(s) 86, 206, 207, 707, 742, 1073
AsuC2I CCSGG 2 cut(s) 513, 739
AsuHPI GGTGA 8 cut(s) 148, 425, 457, 581, 676, 727, 1448, 1534
AsuNHI GCTAGC 1 cut(s) 1097
AvaI CYCGRG 2 cut(s) 209, 1334
AvaII GGWCC 2 cut(s) 86, 742
BaeGI GKGCMC 3 cut(s) 210, 793, 1470
BalI TGGCCA 1 cut(s) 1565
BanI GGYRCC 3 cut(s) 542, 1065, 1465
BanII GRGCYC 1 cut(s) 210
BarI GAAGNNNNNNTAC 2 cut(s) 1202, 1234
Bbv12I GWGCWC 2 cut(s) 340, 793
BbvI GCAGC 3 cut(s) 482, 897, 1587
BccI CCATC 6 cut(s) 68, 189, 197, 419, 760, 1350
BcgI CGANNNNNNTGC 2 cut(s) 158, 192
BciT130I CCWGG 5 cut(s) 84, 240, 711, 1170, 1512
BciVI GTATCC 1 cut(s) 381
BcnI CCSGG 2 cut(s) 513, 739
BcoDI GTCTC 3 cut(s) 357, 566, 1117
BcuI ACTAGT 2 cut(s) 863, 1181
BfaI CTAG 7 cut(s) 704, 864, 969, 1059, 1098, 1182, 1293
BfuAI ACCTGC 1 cut(s) 1291
BfuI GTATCC 1 cut(s) 381
BglI GCCNNNNNGGC 1 cut(s) 1080
BglII AGATCT 1 cut(s) 517
BisI GCNGC 6 cut(s) 471, 600, 771, 911, 1237, 1601
BlsI GCNGC 6 cut(s) 472, 601, 772, 912, 1238, 1602
Bme1390I CCNGG 7 cut(s) 84, 240, 513, 711, 739, 1170, 1512
Bme18I GGWCC 2 cut(s) 86, 742
BmeT110I CYCGRG 2 cut(s) 209, 1334
BmgBI CACGTC 1 cut(s) 442
BmgT120I GGNCC 6 cut(s) 86, 206, 207, 707, 742, 1073
BmiI GGNNCC 6 cut(s) 208, 544, 743, 1067, 1075, 1467
BmrFI CCNGG 7 cut(s) 84, 240, 513, 711, 739, 1170, 1512
BmrI ACTGGG 3 cut(s) 1233, 1248, 1564
BmsI GCATC 3 cut(s) 652, 947, 1515
BmtI GCTAGC 1 cut(s) 1101
BmuI ACTGGG 3 cut(s) 1233, 1248, 1564
BplI GAGNNNNNCTC 2 cut(s) 442, 474
BpmI CTGGAG 2 cut(s) 517, 1191
Bpu10I CCTNAGC 1 cut(s) 1044
BpuMI CCSGG 2 cut(s) 513, 739
BsaI GGTCTC 1 cut(s) 566
BsaJI CCNNGG 9 cut(s) 93, 709, 738, 1024, 1069, 1205, 1357, 1432, 1566
BsaXI ACNNNNNCTCC 2 cut(s) 515, 545
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 359, 1259, 1384, 1475
Bse1I ACTGG 6 cut(s) 29, 170, 196, 1228, 1254, 1559
BseBI CCWGG 5 cut(s) 84, 240, 711, 1170, 1512
BseDI CCNNGG 9 cut(s) 93, 709, 738, 1024, 1069, 1205, 1357, 1432, 1566
BseGI GGATG 7 cut(s) 200, 208, 349, 430, 1342, 1374, 1546
BseLI CCNNNNNNNGG 5 cut(s) 165, 359, 1259, 1384, 1475
BseMII CTCAG 1 cut(s) 575
BseNI ACTGG 6 cut(s) 29, 170, 196, 1228, 1254, 1559
BseRI GAGGAG 1 cut(s) 463
BseSI GKGCMC 3 cut(s) 210, 793, 1470
BseXI GCAGC 3 cut(s) 482, 897, 1587
BsgI GTGCAG 1 cut(s) 1319
Bsh1236I CGCG 2 cut(s) 1463, 1472
Bsh1285I CGRYCG 1 cut(s) 1461
BshFI GGCC 6 cut(s) 208, 708, 714, 1023, 1074, 1565
BshNI GGYRCC 3 cut(s) 542, 1065, 1465
BsiEI CGRYCG 1 cut(s) 1461
BsiHKAI GWGCWC 2 cut(s) 340, 793
BsiHKCI CYCGRG 2 cut(s) 209, 1334
BsiSI CCGG 2 cut(s) 513, 738
BslFI GGGAC 2 cut(s) 755, 968
BslI CCNNNNNNNGG 5 cut(s) 165, 359, 1259, 1384, 1475
BsmAI GTCTC 3 cut(s) 357, 566, 1117
BsmFI GGGAC 2 cut(s) 755, 968
BsmI GAATGC 1 cut(s) 174
BsnI GGCC 6 cut(s) 208, 708, 714, 1023, 1074, 1565
Bso31I GGTCTC 1 cut(s) 566
BsoBI CYCGRG 2 cut(s) 209, 1334
Bsp120I GGGCCC 1 cut(s) 206
Bsp1286I GDGCHC 4 cut(s) 210, 340, 793, 1470
Bsp143I GATC 4 cut(s) 15, 517, 1055, 1438
Bsp19I CCATGG 1 cut(s) 1566
BspANI GGCC 6 cut(s) 208, 708, 714, 1023, 1074, 1565
BspCNI CTCAG 1 cut(s) 576
BspFNI CGCG 2 cut(s) 1463, 1472
BspLI GGNNCC 6 cut(s) 208, 544, 743, 1067, 1075, 1467
BspMI ACCTGC 1 cut(s) 1291
BspOI GCTAGC 1 cut(s) 1101
BspPI GGATC 2 cut(s) 10, 1433
BspT107I GGYRCC 3 cut(s) 542, 1065, 1465
BspTNI GGTCTC 1 cut(s) 566
BsrBI CCGCTC 1 cut(s) 1239
BsrI ACTGG 6 cut(s) 29, 170, 196, 1228, 1254, 1559
BssECI CCNNGG 9 cut(s) 93, 709, 738, 1024, 1069, 1205, 1357, 1432, 1566
BssMI GATC 4 cut(s) 15, 517, 1055, 1438
BssT1I CCWWGG 4 cut(s) 93, 1069, 1432, 1566
Bst2UI CCWGG 5 cut(s) 84, 240, 711, 1170, 1512
Bst6I CTCTTC 2 cut(s) 29, 1013
BstAPI GCANNNNNTGC 1 cut(s) 797
BstC8I GCNNGC 6 cut(s) 300, 915, 1099, 1241, 1470, 1623
BstDEI CTNAG 5 cut(s) 317, 584, 951, 1044, 1448
BstDSI CCRYGG 3 cut(s) 1205, 1357, 1566
BstEII GGTNACC 1 cut(s) 428
BstENI CCTNNNNNAGG 1 cut(s) 1382
BstF5I GGATG 7 cut(s) 200, 208, 349, 430, 1342, 1374, 1546
BstFNI CGCG 2 cut(s) 1463, 1472
BstKTI GATC 4 cut(s) 18, 520, 1058, 1441
BstMAI GTCTC 3 cut(s) 357, 566, 1117
BstMBI GATC 4 cut(s) 15, 517, 1055, 1438
BstMCI CGRYCG 1 cut(s) 1461
BstMWI GCNNNNNNNGC 6 cut(s) 776, 797, 910, 963, 1080, 1469
BstNI CCWGG 5 cut(s) 84, 240, 711, 1170, 1512
BstNSI RCATGY 1 cut(s) 1138
BstPI GGTNACC 1 cut(s) 428
BstSCI CCNGG 7 cut(s) 82, 238, 511, 709, 737, 1168, 1510
BstSLI GKGCMC 3 cut(s) 210, 793, 1470
BstUI CGCG 2 cut(s) 1463, 1472
BstV1I GCAGC 3 cut(s) 482, 897, 1587
BstX2I RGATCY 1 cut(s) 517
BstXI CCANNNNNNTGG 1 cut(s) 1518
BstYI RGATCY 1 cut(s) 517
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 6 cut(s) 208, 708, 714, 1023, 1074, 1565
BtgI CCRYGG 3 cut(s) 1205, 1357, 1566
BtrI CACGTC 1 cut(s) 442
BtsCI GGATG 7 cut(s) 200, 208, 349, 430, 1342, 1374, 1546
BtsI GCAGTG 1 cut(s) 1092
BtsIMutI CAGTG 6 cut(s) 36, 72, 163, 793, 1092, 1221
BveI ACCTGC 1 cut(s) 1291
Cac8I GCNNGC 6 cut(s) 300, 915, 1099, 1241, 1470, 1623
Cfr13I GGNCC 6 cut(s) 86, 206, 207, 707, 742, 1073
Csp6I GTAC 3 cut(s) 285, 670, 1285
CviAII CATG 6 cut(s) 170, 312, 700, 1102, 1135, 1567
CviQI GTAC 3 cut(s) 285, 670, 1285
DdeI CTNAG 5 cut(s) 317, 584, 951, 1044, 1448
DpnI GATC 4 cut(s) 17, 519, 1057, 1440
DpnII GATC 4 cut(s) 15, 517, 1055, 1438
DrdI GACNNNNNNGTC 1 cut(s) 119
DseDI GACNNNNNNGTC 1 cut(s) 119
EaeI YGGCCR 1 cut(s) 1563
Eam1104I CTCTTC 2 cut(s) 29, 1013
EarI CTCTTC 2 cut(s) 29, 1013
EciI GGCGGA 1 cut(s) 215
Eco130I CCWWGG 4 cut(s) 93, 1069, 1432, 1566
Eco24I GRGCYC 1 cut(s) 210
Eco31I GGTCTC 1 cut(s) 566
Eco47I GGWCC 2 cut(s) 86, 742
Eco57I CTGAAG 1 cut(s) 943
Eco88I CYCGRG 2 cut(s) 209, 1334
Eco91I GGTNACC 1 cut(s) 428
EcoNI CCTNNNNNAGG 1 cut(s) 1382
EcoO109I RGGNCCY 1 cut(s) 1073
EcoO65I GGTNACC 1 cut(s) 428
EcoRII CCWGG 5 cut(s) 82, 238, 709, 1168, 1510
EcoT14I CCWWGG 4 cut(s) 93, 1069, 1432, 1566
EcoT22I ATGCAT 1 cut(s) 1530
EcoT38I GRGCYC 1 cut(s) 210
ErhI CCWWGG 4 cut(s) 93, 1069, 1432, 1566
FaeI CATG 6 cut(s) 173, 315, 703, 1105, 1138, 1570
FalI AAGNNNNNCTT 2 cut(s) 387, 419
FaqI GGGAC 2 cut(s) 755, 968
FatI CATG 6 cut(s) 169, 311, 699, 1101, 1134, 1566
FauI CCCGC 2 cut(s) 1209, 1477
Fnu4HI GCNGC 6 cut(s) 471, 600, 771, 911, 1237, 1601
FokI GGATG 7 cut(s) 207, 215, 336, 437, 1329, 1361, 1553
FriOI GRGCYC 1 cut(s) 210
Fsp4HI GCNGC 6 cut(s) 471, 600, 771, 911, 1237, 1601
FspBI CTAG 7 cut(s) 704, 864, 969, 1059, 1098, 1182, 1293
GluI GCNGC 6 cut(s) 471, 600, 771, 911, 1237, 1601
GsuI CTGGAG 2 cut(s) 517, 1191
HaeIII GGCC 6 cut(s) 208, 708, 714, 1023, 1074, 1565
HapII CCGG 2 cut(s) 513, 738
Hin1II CATG 6 cut(s) 173, 315, 703, 1105, 1138, 1570
HincII GTYRAC 1 cut(s) 509
HindII GTYRAC 1 cut(s) 509
HindIII AAGCTT 1 cut(s) 1149
HinfI GANTC 4 cut(s) 365, 457, 563, 1029
HpaII CCGG 2 cut(s) 513, 738
HphI GGTGA 8 cut(s) 148, 425, 457, 581, 676, 727, 1448, 1534
Hpy166II GTNNAC 7 cut(s) 103, 264, 509, 672, 791, 1177, 1582
Hpy188I TCNGA 3 cut(s) 962, 1028, 1493
Hpy188III TCNNGA 5 cut(s) 278, 756, 833, 1059, 1260
Hpy8I GTNNAC 7 cut(s) 103, 264, 509, 672, 791, 1177, 1582
Hpy99I CGWCG 3 cut(s) 632, 980, 1001
HpyAV CCTTC 3 cut(s) 275, 955, 1056
HpyCH4IV ACGT 3 cut(s) 153, 441, 975
HpyCH4V TGCA 8 cut(s) 45, 791, 855, 870, 1300, 1382, 1528, 1603
HpyF10VI GCNNNNNNNGC 6 cut(s) 776, 797, 910, 963, 1080, 1469
HpyF3I CTNAG 5 cut(s) 317, 584, 951, 1044, 1448
HpySE526I ACGT 3 cut(s) 153, 441, 975
Hsp92II CATG 6 cut(s) 173, 315, 703, 1105, 1138, 1570
Kzo9I GATC 4 cut(s) 15, 517, 1055, 1438
LmnI GCTCC 6 cut(s) 335, 467, 478, 536, 805, 1597
Lsp1109I GCAGC 3 cut(s) 482, 897, 1587
LweI GCATC 3 cut(s) 652, 947, 1515
MaeI CTAG 7 cut(s) 704, 864, 969, 1059, 1098, 1182, 1293
MaeII ACGT 3 cut(s) 153, 441, 975
MaeIII GTNAC 8 cut(s) 130, 154, 217, 248, 428, 1308, 1327, 1532
MalI GATC 4 cut(s) 17, 519, 1057, 1440
MbiI CCGCTC 1 cut(s) 1239
MboI GATC 4 cut(s) 15, 517, 1055, 1438
MboII GAAGA 5 cut(s) 46, 398, 613, 1000, 1003
MflI RGATCY 1 cut(s) 517
MhlI GDGCHC 4 cut(s) 210, 340, 793, 1470
MlsI TGGCCA 1 cut(s) 1565
MluCI AATT 3 cut(s) 888, 1140, 1396
MluNI TGGCCA 1 cut(s) 1565
MlyI GAGTC 4 cut(s) 359, 451, 557, 1023
Mox20I TGGCCA 1 cut(s) 1565
Mph1103I ATGCAT 1 cut(s) 1530
MroXI GAANNNNTTC 1 cut(s) 1007
MscI TGGCCA 1 cut(s) 1565
MseI TTAA 4 cut(s) 501, 731, 891, 1428
MslI CAYNNNNRTG 4 cut(s) 65, 168, 1362, 1539
Msp20I TGGCCA 1 cut(s) 1565
MspA1I CMGCKG 1 cut(s) 1625
MspI CCGG 2 cut(s) 513, 738
MspR9I CCNGG 7 cut(s) 84, 240, 513, 711, 739, 1170, 1512
Mva1269I GAATGC 1 cut(s) 174
MvaI CCWGG 5 cut(s) 84, 240, 711, 1170, 1512
MvnI CGCG 2 cut(s) 1463, 1472
MwoI GCNNNNNNNGC 6 cut(s) 776, 797, 910, 963, 1080, 1469
NciI CCSGG 2 cut(s) 513, 739
NcoI CCATGG 1 cut(s) 1566
NdeII GATC 4 cut(s) 15, 517, 1055, 1438
NheI GCTAGC 1 cut(s) 1097
NlaIII CATG 6 cut(s) 173, 315, 703, 1105, 1138, 1570
NlaIV GGNNCC 6 cut(s) 208, 544, 743, 1067, 1075, 1467
NmuCI GTSAC 4 cut(s) 130, 154, 1327, 1532
NsiI ATGCAT 1 cut(s) 1530
NspI RCATGY 1 cut(s) 1138
PaqCI CACCTGC 1 cut(s) 1291
PciI ACATGT 1 cut(s) 1134
PctI GAATGC 1 cut(s) 174
PdmI GAANNNNTTC 1 cut(s) 1007
PflMI CCANNNNNTGG 1 cut(s) 165
PfoI TCCNGGA 2 cut(s) 82, 1168
PkrI GCNGC 6 cut(s) 472, 601, 772, 912, 1238, 1602
PleI GAGTC 4 cut(s) 359, 451, 557, 1023
PpsI GAGTC 4 cut(s) 359, 451, 557, 1023
PscI ACATGT 1 cut(s) 1134
Psp6I CCWGG 5 cut(s) 82, 238, 709, 1168, 1510
PspEI GGTNACC 1 cut(s) 428
PspGI CCWGG 5 cut(s) 82, 238, 709, 1168, 1510
PspN4I GGNNCC 6 cut(s) 208, 544, 743, 1067, 1075, 1467
PspOMI GGGCCC 1 cut(s) 206
PspPI GGNCC 6 cut(s) 86, 206, 207, 707, 742, 1073
PsuI RGATCY 1 cut(s) 517
RsaI GTAC 3 cut(s) 286, 671, 1286
RsaNI GTAC 3 cut(s) 285, 670, 1285
RseI CAYNNNNRTG 4 cut(s) 65, 168, 1362, 1539
SaqAI TTAA 4 cut(s) 501, 731, 891, 1428
SatI GCNGC 6 cut(s) 471, 600, 771, 911, 1237, 1601
Sau3AI GATC 4 cut(s) 15, 517, 1055, 1438
Sau96I GGNCC 6 cut(s) 86, 206, 207, 707, 742, 1073
SchI GAGTC 4 cut(s) 359, 451, 557, 1023
ScrFI CCNGG 7 cut(s) 84, 240, 513, 711, 739, 1170, 1512
SduI GDGCHC 4 cut(s) 210, 340, 793, 1470
SfaNI GCATC 3 cut(s) 652, 947, 1515
SinI GGWCC 2 cut(s) 86, 742
SmiMI CAYNNNNRTG 4 cut(s) 65, 168, 1362, 1539
SpeI ACTAGT 2 cut(s) 863, 1181
Sse9I AATT 3 cut(s) 888, 1140, 1396
SspI AATATT 1 cut(s) 12
SspMI CTAG 7 cut(s) 704, 864, 969, 1059, 1098, 1182, 1293
StyD4I CCNGG 7 cut(s) 82, 238, 511, 709, 737, 1168, 1510
StyI CCWWGG 4 cut(s) 93, 1069, 1432, 1566
TaiI ACGT 3 cut(s) 156, 444, 978
TaqI TCGA 5 cut(s) 145, 757, 978, 996, 1054
TaqII GACCGA 1 cut(s) 1427
TasI AATT 3 cut(s) 888, 1140, 1396
TauI GCSGC 3 cut(s) 602, 773, 1239
Tru1I TTAA 4 cut(s) 501, 731, 891, 1428
Tru9I TTAA 4 cut(s) 501, 731, 891, 1428
TscAI CASTG 6 cut(s) 36, 72, 170, 793, 1099, 1228
TseFI GTSAC 4 cut(s) 130, 154, 1327, 1532
TseI GCWGC 3 cut(s) 470, 910, 1600
Tsp45I GTSAC 4 cut(s) 130, 154, 1327, 1532
TspDTI ATGAA 4 cut(s) 338, 1118, 1340, 1535
TspGWI ACGGA 4 cut(s) 616, 792, 835, 1222
TspRI CASTG 6 cut(s) 36, 72, 170, 793, 1099, 1228
Van91I CCANNNNNTGG 1 cut(s) 165
VneI GTGCAC 1 cut(s) 789
VpaK11BI GGWCC 2 cut(s) 86, 742
XagI CCTNNNNNAGG 1 cut(s) 1382
XapI RAATTY 1 cut(s) 1396
XbaI TCTAGA 1 cut(s) 1058
XceI RCATGY 1 cut(s) 1138
XcmI CCANNNNNNNNNTGG 2 cut(s) 1076, 1573
XmnI GAANNNNTTC 1 cut(s) 1007
XspI CTAG 7 cut(s) 704, 864, 969, 1059, 1098, 1182, 1293
Zsp2I ATGCAT 1 cut(s) 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.