Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000809

Physical Location & Seq

Genomic Coordinates Reverse (-)

1625528 .. 1628175

Gene Structure 2648 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGTCGTACGGATACGACGATGAATCCAAGAGGAAGAGGAGGTACATTGTTATCACCATCTCCTCTGTTCTTTTGATCTCGATGGTGGTTGCGGTTACCGTTGGTGTCAGCCTCAATAAGCATGACGGTGACTCTAAAGGTAAAGCAGAGGTAAATGCTTCCGTCAAGGCCGTCAAGGATGTTTGTGCACCAACTGATTACAGAAAGACTTGTGAAGACACTCTGATTAAGAACGGGAAGAACACAACCGACCCGATGGAGTTGGTTAAGACTGCGTTTAATGTTACGATGAAGCAGATCACGGACGCAGCTAAGAAGTCGCAGACGATTATGGAGCTTCAGAAGGATTCAAGGACTAGGATGGCGCTTGATCAATGCAAGGAGCTTATGGATTACGCGTTGGACGAACTAAGTAACTCTTTCGAGGAGCTTGGAAAATTTGAGTTCCACCTGCTCGACGAGGCTTTGATCAATCTGAGGATTTGGCTTAGCGCAGCGATCAGCCACGAGGAGACTTGTCTTGAAGGGTTTCAAGGAACACAAGGGAATGCTGGAGAGACAATGAAGAAAGCGTTGAAGACTGCAATCGAGTTGACCCACAACGGGCTAGCGATCATCAGCGAAATGTCGAATTTTGTTGGCCAAATGCAGATTCCGGGGCTGAACAGTCGTCGACTTTTGGCTGAAGGATTCCCTTCGTGGGTAGACCAGCGTGGGCGTAAACTCCTACAAGCTGCTGCCGCATATTCCGATGTGAAGCCTGATATTGTGGTGGCACAGGACGGGAGCGGTCAATACAAGACGATCAATGAAGCGTTGCAGTTTGTCCCCAAGAAGAGGAACACAACTTTCGTGGTTCACATTAAGGCTGGACTCTACAAGGAGTATGTTCAGGTGAACAAGACCATGTCGCATCTTGTGTTCATCGGTGATGGTCCCGACAAAACTATCATTTCCGGCAACAAAAATTACAAGGATGGTATCACCACCTACCGTACCGCCACTGTCGCCATTGTTGGAAACTACTTCATTGCCAAGAACATTGGGTTCGAAAACACCGCTGGGGCAATAAAACATCAAGCGGTTGCAGTTAGGGTTCAATCAGATGAGTCCATATTTTTCAACTGTAGATTCGATGGCTACCAAGACACGCTCTACACTCACTCCCACCGTCAGTTCTTCCGTGATTGTACCATTTCAGGCACCATTGATTTCCTCTTTGGAGATGCGGCTGCTGTATTCCAAAACTGTACGTTGTTGGTGAGGAAGCCACTCCCAAACCAAGCATGCCCTATCACAGCCCACGGTCGAAAAGACCCAAGGGAATCCACTGGATTTGTGTTCCAAGGGTGCACCATTGCCGGTGAACCAGATTACTTGGCTGTCAAGGAAACCAGCAAAGCCTATCTCGGTAGGCCATGGAAGGAATATTCAAGGACTATCATCATGAACACTTTCATCCCAGATTTTGTTCAGCCTCAAGGATGGCAACCATGGCTCGGGGACTTCGGCCTCAAGACATTGTTCTACTCTGAGGTCCAAAACACAGGACCGGGATCCGCCCTTGCAAACCGGGTTACTTGGGCTGGAATCAAGACATTGAGCGAAGAAGATATCCTCAAGTTCACACCGGCTCAGTACATCCAAGGTGACGACTGGATTCCAGGCAAAGGTGTTCCGTACACTACAGGCCTTTTGGCTGGGAACCCGGCCGCTGCAACCACCACCCCAAGCGTCTCAGCTGCTGCTCCAGGTTTCTCCACCTTCACGGATACAAGTGGCGCTGACTCAATTGCTCCAACAGCTTCCCCAGCAGCTTCCCCGGAAAGTTCAATTAGCATGGCTTACACGGGGACAGCTTCTCCGGAAAGTTCGATTAAGGTGTCTTCTTCAACGGAGACGGCTTCCCCGGAAAGTTCATTTACGGAGGCTTCAACGGCTTCCCCAGAAAGTTCAATTATGGTGGCTTCAACGGAGAGCTCTGGTTCGTTTTTTTCAATGTTTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005576 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0048046 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

669

Amino Acids

72.92

Weight (kDa)

6.02

Isoelectric Point (pI)

34.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	57 - 205	1.6e-31	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	255 - 551	5.1e-142	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05610 AT3G06830 AT4G15980 AT4G15980 AT5G27870 AT5G49180
fragaria_vesca	FvH4_4g18670 FvH4_4g18670 FvH4_4g18670 FvH4_4g18690 FvH4_4g18690
malus_domestica	MD04G1198100.v1.1 MD12G1210700.v1.1 MD13G1164500.v1.1 MD13G1164600.v1.1 MD13G1164700.v1.1 MD13G1164800.v1.1 MD16G1164200.v1.1 MD16G1164300.v1.1
prunus_persica	Prupe.1G123500_v2.0.a1 Prupe.1G123700_v2.0.a1 Prupe.1G123800_v2.0.a1 Prupe.1G131900_v2.0.a1 Prupe.1G132000_v2.0.a1 Prupe.1G132300_v2.0.a1 Prupe.6G318600_v2.0.a1
pyrus_communis	pycom13g14040
rosa_chinensis	RchiOBHm_Chr2g0115181 RchiOBHm_Chr3g0456331 RchiOBHm_Chr4g0423371 RchiOBHm_Chr4g0423391
rosa_laevigata	RLG00000007564 RLG00000007566 RLG00000018164 RLG00000025312
rosa_multiflora	Rmu_co8436939.1_g000001 Rmu_sc0002607.1_g000023 Rmu_sc0002784.1_g000024 Rmu_sc0005307.1_g000019 Rmu_sc0018054.1_g000005 Rmu_sc0031272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130660 Rroxscaffold_5G00365560 Rroxscaffold_5G00365590
rosa_rugosa	Rorug02G0194200 Rorug04G0186900 Rorug04G0187000 Rorug04G0187100 Rorug04G0187200
rosa_samantha	Rh2AG252700 Rh2BG262300 Rh2CG257300 Rh2DG260900 Rh3BG074700 Rh3CG074300 Rh3DG076200 Rh4AG246000 Rh4AG246100 Rh4BG251500 Rh4BG251600 Rh4CG259800 Rh4CG260100 Rh4DG246400 Rh4DG247000
rosa_wichuraiana	Rw2G019710 Rw3G006230 Rw4G021140 Rw4G021150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	459
Acc36I	ACCTGC	1 cut(s)	459
AccB1I	GGYRCC	1 cut(s)	1202
AccBSI	CCGCTC	1 cut(s)	789
AccI	GTMKAC	2 cut(s)	673, 705
AccII	CGCG	1 cut(s)	398
AccIII	TCCGGA	1 cut(s)	1864
AciI	CCGC	9 cut(s)	92, 741, 789, 999, 1059, 1082, 1229, 1560, 1713
AclWI	GGATC	2 cut(s)	1551, 1564
AcoI	YGGCCR	2 cut(s)	640, 1710
AcsI	RAATTY	2 cut(s)	437, 631
AcuI	CTGAAG	2 cut(s)	323, 705
AfaI	GTAC	7 cut(s)	8, 44, 997, 1192, 1252, 1640, 1682
AfiI	CCNNNNNNNGG	5 cut(s)	603, 700, 837, 1499, 1670
AflIII	ACRYGT	1 cut(s)	396
AjnI	CCWGG	2 cut(s)	1663, 1750
AjuI	GAANNNNNNNTTGG	2 cut(s)	636, 668
Alw21I	GWGCWC	3 cut(s)	190, 1355, 1982
Alw26I	GTCTC	4 cut(s)	506, 551, 1741, 1892
Alw44I	GTGCAC	2 cut(s)	186, 1351
AlwI	GGATC	2 cut(s)	1551, 1564
AlwNI	CAGNNNCTG	1 cut(s)	1745
Ama87I	CYCGRG	1 cut(s)	1499
Aor13HI	TCCGGA	1 cut(s)	1864
AoxI	GGCC	6 cut(s)	168, 640, 1415, 1510, 1690, 1710
ApaLI	GTGCAC	2 cut(s)	186, 1351
ApeKI	GCWGC	9 cut(s)	308, 494, 734, 737, 1232, 1715, 1742, 1745, 1814
ApoI	RAATTY	2 cut(s)	437, 631
Asp700I	GAANNNNTTC	2 cut(s)	528, 1454
AspLEI	GCGC	3 cut(s)	367, 494, 1784
AspS9I	GGNCC	3 cut(s)	935, 1537, 1550
AsuC2I	CCSGG	6 cut(s)	657, 1554, 1574, 1709, 1823, 1910
AsuHPI	GGTGA	8 cut(s)	46, 140, 907, 941, 976, 1273, 1376, 1661
AsuII	TTCGAA	1 cut(s)	1050
AsuNHI	GCTAGC	1 cut(s)	607
AvaI	CYCGRG	1 cut(s)	1499
AvaII	GGWCC	3 cut(s)	935, 1537, 1550
BaeGI	GKGCMC	2 cut(s)	190, 1355
BalI	TGGCCA	1 cut(s)	642
BamHI	GGATCC	1 cut(s)	1556
BanI	GGYRCC	1 cut(s)	1202
BanII	GRGCYC	1 cut(s)	1982
BarI	GAAGNNNNNNTAC	2 cut(s)	26, 58
BauI	CACGAG	1 cut(s)	506
BbsI	GAAGAC	3 cut(s)	222, 584, 1878
Bbv12I	GWGCWC	3 cut(s)	190, 1355, 1982
BbvI	GCAGC	9 cut(s)	320, 506, 721, 724, 1219, 1702, 1729, 1732, 1826
BccI	CCATC	8 cut(s)	65, 76, 250, 355, 926, 971, 1130, 1479
BceAI	ACGGC	3 cut(s)	155, 1917, 1953
BciT130I	CCWGG	2 cut(s)	1665, 1752
BciVI	GTATCC	2 cut(s)	5, 1765
BclI	TGATCA	2 cut(s)	370, 468
BcnI	CCSGG	6 cut(s)	657, 1554, 1574, 1709, 1823, 1910
BcoDI	GTCTC	4 cut(s)	506, 551, 1741, 1892
BfaI	CTAG	2 cut(s)	357, 608
BfmI	CTRYAG	2 cut(s)	1126, 1686
BfoI	RGCGCY	2 cut(s)	368, 1785
BfuAI	ACCTGC	1 cut(s)	459
BfuI	GTATCC	2 cut(s)	5, 1765
BlpI	GCTNAGC	1 cut(s)	488
Bme1390I	CCNGG	8 cut(s)	657, 1554, 1574, 1665, 1709, 1752, 1823, 1910
Bme18I	GGWCC	3 cut(s)	935, 1537, 1550
BmeT110I	CYCGRG	1 cut(s)	1499
BmgT120I	GGNCC	3 cut(s)	935, 1537, 1550
BmiI	GGNNCC	4 cut(s)	937, 1204, 1558, 1706
BmrFI	CCNGG	8 cut(s)	657, 1554, 1574, 1665, 1709, 1752, 1823, 1910
BmsI	GCATC	2 cut(s)	922, 1216
BmtI	GCTAGC	1 cut(s)	611
BpiI	GAAGAC	3 cut(s)	222, 584, 1878
BpmI	CTGGAG	2 cut(s)	573, 1734
Bpu1102I	GCTNAGC	1 cut(s)	488
Bpu14I	TTCGAA	1 cut(s)	1050
BpuEI	CTTGAG	3 cut(s)	1464, 1499, 1604
BpuMI	CCSGG	6 cut(s)	657, 1554, 1574, 1709, 1823, 1910
BsaJI	CCNNGG	9 cut(s)	656, 1303, 1319, 1345, 1418, 1493, 1645, 1821, 1908
BsaWI	WCCGGW	1 cut(s)	1864
BsaXI	ACNNNNNCTCC	4 cut(s)	1148, 1178, 1846, 1876
Bsc4I	CCNNNNNNNGG	5 cut(s)	603, 700, 837, 1499, 1670
Bse118I	RCCGGY	2 cut(s)	1361, 1630
Bse1I	ACTGG	2 cut(s)	1336, 1661
Bse3DI	GCAATG	2 cut(s)	1029, 1356
BseAI	TCCGGA	1 cut(s)	1864
BseBI	CCWGG	2 cut(s)	1665, 1752
BseDI	CCNNGG	9 cut(s)	656, 1303, 1319, 1345, 1418, 1493, 1645, 1821, 1908
BseGI	GGATG	6 cut(s)	184, 366, 982, 1458, 1490, 1641
BseLI	CCNNNNNNNGG	5 cut(s)	603, 700, 837, 1499, 1670
BseMI	GCAATG	2 cut(s)	1029, 1356
BseMII	CTCAG	4 cut(s)	467, 1524, 1649, 1752
BseNI	ACTGG	2 cut(s)	1336, 1661
BseRI	GAGGAG	4 cut(s)	52, 52, 440, 524
BseSI	GKGCMC	2 cut(s)	190, 1355
BseX3I	CGGCCG	1 cut(s)	1710
BseXI	GCAGC	9 cut(s)	320, 506, 721, 724, 1219, 1702, 1729, 1732, 1826
BseYI	CCCAGC	3 cut(s)	1061, 1700, 1810
Bsh1236I	CGCG	1 cut(s)	398
Bsh1285I	CGRYCG	2 cut(s)	1309, 1713
BshFI	GGCC	6 cut(s)	170, 642, 1417, 1512, 1692, 1712
BshNI	GGYRCC	1 cut(s)	1202
BsiEI	CGRYCG	2 cut(s)	1309, 1713
BsiHKAI	GWGCWC	3 cut(s)	190, 1355, 1982
BsiHKCI	CYCGRG	1 cut(s)	1499
BsiWI	CGTACG	1 cut(s)	6
BslFI	GGGAC	4 cut(s)	812, 921, 1517, 1867
BslI	CCNNNNNNNGG	5 cut(s)	603, 700, 837, 1499, 1670
BsmAI	GTCTC	4 cut(s)	506, 551, 1741, 1892
BsmBI	CGTCTC	2 cut(s)	1741, 1892
BsmFI	GGGAC	4 cut(s)	812, 921, 1517, 1867
BsmI	GAATGC	1 cut(s)	553
BsnI	GGCC	6 cut(s)	170, 642, 1417, 1512, 1692, 1712
BsoBI	CYCGRG	1 cut(s)	1499
Bsp119I	TTCGAA	1 cut(s)	1050
Bsp1286I	GDGCHC	3 cut(s)	190, 1355, 1982
Bsp13I	TCCGGA	1 cut(s)	1864
Bsp143I	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
Bsp1720I	GCTNAGC	1 cut(s)	488
Bsp19I	CCATGG	2 cut(s)	1418, 1493
BspACI	CCGC	9 cut(s)	92, 741, 789, 999, 1059, 1082, 1229, 1560, 1713
BspANI	GGCC	6 cut(s)	170, 642, 1417, 1512, 1692, 1712
BspCNI	CTCAG	4 cut(s)	468, 1525, 1648, 1751
BspEI	TCCGGA	1 cut(s)	1864
BspFNI	CGCG	1 cut(s)	398
BspHI	TCATGA	1 cut(s)	1446
BspLI	GGNNCC	4 cut(s)	937, 1204, 1558, 1706
BspMI	ACCTGC	1 cut(s)	459
BspOI	GCTAGC	1 cut(s)	611
BspPI	GGATC	2 cut(s)	1551, 1564
BspT104I	TTCGAA	1 cut(s)	1050
BspT107I	GGYRCC	1 cut(s)	1202
BsrBI	CCGCTC	1 cut(s)	789
BsrDI	GCAATG	2 cut(s)	1029, 1356
BsrFI	RCCGGY	2 cut(s)	1361, 1630
BsrI	ACTGG	2 cut(s)	1336, 1661
BssAI	RCCGGY	2 cut(s)	1361, 1630
BssECI	CCNNGG	9 cut(s)	656, 1303, 1319, 1345, 1418, 1493, 1645, 1821, 1908
BssMI	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
BssSI	CACGAG	1 cut(s)	506
BssT1I	CCWWGG	5 cut(s)	1319, 1345, 1418, 1493, 1645
Bst2BI	CACGAG	1 cut(s)	506
Bst2UI	CCWGG	2 cut(s)	1665, 1752
Bst4CI	ACNGT	9 cut(s)	100, 128, 668, 995, 1006, 1127, 1172, 1250, 1307
Bst6I	CTCTTC	2 cut(s)	29, 830
BstBI	TTCGAA	1 cut(s)	1050
BstC8I	GCNNGC	2 cut(s)	609, 1288
BstDEI	CTNAG	7 cut(s)	312, 410, 476, 488, 1533, 1635, 1738
BstDSI	CCRYGG	3 cut(s)	1303, 1418, 1493
BstEII	GGTNACC	1 cut(s)	94
BstF5I	GGATG	6 cut(s)	184, 366, 982, 1458, 1490, 1641
BstFNI	CGCG	1 cut(s)	398
BstH2I	RGCGCY	2 cut(s)	368, 1785
BstHHI	GCGC	3 cut(s)	367, 494, 1784
BstKTI	GATC	8 cut(s)	78, 300, 373, 471, 501, 615, 807, 1559
BstMAI	GTCTC	4 cut(s)	506, 551, 1741, 1892
BstMBI	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
BstMCI	CGRYCG	2 cut(s)	1309, 1713
BstMWI	GCNNNNNNNGC	6 cut(s)	740, 1007, 1495, 1802, 1811, 1937
BstNI	CCWGG	2 cut(s)	1665, 1752
BstNSI	RCATGY	1 cut(s)	1290
BstPI	GGTNACC	1 cut(s)	94
BstSCI	CCNGG	8 cut(s)	655, 1552, 1572, 1663, 1707, 1750, 1821, 1908
BstSFI	CTRYAG	2 cut(s)	1126, 1686
BstSLI	GKGCMC	2 cut(s)	190, 1355
BstUI	CGCG	1 cut(s)	398
BstV1I	GCAGC	9 cut(s)	320, 506, 721, 724, 1219, 1702, 1729, 1732, 1826
BstV2I	GAAGAC	3 cut(s)	222, 584, 1878
BstX2I	RGATCY	1 cut(s)	1556
BstYI	RGATCY	1 cut(s)	1556
BstZI	CGGCCG	1 cut(s)	1710
BsuI	GTATCC	2 cut(s)	5, 1765
BsuRI	GGCC	6 cut(s)	170, 642, 1417, 1512, 1692, 1712
BtgI	CCRYGG	3 cut(s)	1303, 1418, 1493
BtsCI	GGATG	6 cut(s)	184, 366, 982, 1458, 1490, 1641
BtsIMutI	CAGTG	2 cut(s)	1002, 1329
BveI	ACCTGC	1 cut(s)	459
Cac8I	GCNNGC	2 cut(s)	609, 1288
CaiI	CAGNNNCTG	1 cut(s)	1745
CciI	TCATGA	1 cut(s)	1446
CfoI	GCGC	3 cut(s)	367, 494, 1784
Cfr10I	RCCGGY	2 cut(s)	1361, 1630
Cfr13I	GGNCC	3 cut(s)	935, 1537, 1550
CseI	GACGC	2 cut(s)	314, 1723
Csp6I	GTAC	7 cut(s)	7, 43, 996, 1191, 1251, 1639, 1681
CspCI	CAANNNNNGTGG	6 cut(s)	834, 869, 1318, 1353, 1944, 1979
CviAII	CATG	7 cut(s)	122, 907, 1287, 1419, 1447, 1494, 1840
CviQI	GTAC	7 cut(s)	7, 43, 996, 1191, 1251, 1639, 1681
DdeI	CTNAG	7 cut(s)	312, 410, 476, 488, 1533, 1635, 1738
DpnI	GATC	8 cut(s)	77, 299, 372, 470, 500, 614, 806, 1558
DpnII	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
EaeI	YGGCCR	2 cut(s)	640, 1710
EagI	CGGCCG	1 cut(s)	1710
Eam1104I	CTCTTC	2 cut(s)	29, 830
EarI	CTCTTC	2 cut(s)	29, 830
EciI	GGCGGA	1 cut(s)	1549
Ecl136II	GAGCTC	1 cut(s)	1980
EclXI	CGGCCG	1 cut(s)	1710
Eco130I	CCWWGG	5 cut(s)	1319, 1345, 1418, 1493, 1645
Eco147I	AGGCCT	1 cut(s)	1692
Eco24I	GRGCYC	1 cut(s)	1982
Eco32I	GATATC	1 cut(s)	1615
Eco47I	GGWCC	3 cut(s)	935, 1537, 1550
Eco52I	CGGCCG	1 cut(s)	1710
Eco53kI	GAGCTC	1 cut(s)	1980
Eco57I	CTGAAG	2 cut(s)	323, 705
Eco88I	CYCGRG	1 cut(s)	1499
Eco91I	GGTNACC	1 cut(s)	94
EcoICRI	GAGCTC	1 cut(s)	1980
EcoO65I	GGTNACC	1 cut(s)	94
EcoRII	CCWGG	2 cut(s)	1663, 1750
EcoRV	GATATC	1 cut(s)	1615
EcoT14I	CCWWGG	5 cut(s)	1319, 1345, 1418, 1493, 1645
EcoT38I	GRGCYC	1 cut(s)	1982
ErhI	CCWWGG	5 cut(s)	1319, 1345, 1418, 1493, 1645
Esp3I	CGTCTC	2 cut(s)	1741, 1892
FaeI	CATG	7 cut(s)	125, 910, 1290, 1422, 1450, 1497, 1843
FalI	AAGNNNNNCTT	2 cut(s)	403, 435
FaqI	GGGAC	4 cut(s)	812, 921, 1517, 1867
FatI	CATG	7 cut(s)	121, 906, 1286, 1418, 1446, 1493, 1839
FbaI	TGATCA	2 cut(s)	370, 468
FblI	GTMKAC	2 cut(s)	673, 705
FokI	GGATG	6 cut(s)	191, 373, 989, 1445, 1497, 1628
FriOI	GRGCYC	1 cut(s)	1982
FspBI	CTAG	2 cut(s)	357, 608
GlaI	GCGC	3 cut(s)	366, 493, 1783
GsaI	CCCAGC	3 cut(s)	1065, 1704, 1814
GsuI	CTGGAG	2 cut(s)	573, 1734
HaeII	RGCGCY	2 cut(s)	368, 1785
HaeIII	GGCC	6 cut(s)	170, 642, 1417, 1512, 1692, 1712
HgaI	GACGC	2 cut(s)	314, 1723
HhaI	GCGC	3 cut(s)	367, 494, 1784
Hin1II	CATG	7 cut(s)	125, 910, 1290, 1422, 1450, 1497, 1843
Hin6I	GCGC	3 cut(s)	365, 492, 1782
HinP1I	GCGC	3 cut(s)	365, 492, 1782
HincII	GTYRAC	2 cut(s)	594, 674
HindII	GTYRAC	2 cut(s)	594, 674
HphI	GGTGA	8 cut(s)	46, 140, 907, 941, 976, 1273, 1376, 1661
Hpy188I	TCNGA	6 cut(s)	225, 342, 477, 751, 1105, 1534
Hpy188III	TCNNGA	7 cut(s)	79, 521, 938, 1447, 1516, 1594, 1865
Hpy99I	CGWCG	3 cut(s)	20, 461, 675
HpyAV	CCTTC	6 cut(s)	337, 518, 680, 705, 1417, 1774
HpyCH4III	ACNGT	9 cut(s)	100, 128, 668, 995, 1006, 1127, 1172, 1250, 1307
HpyCH4IV	ACGT	1 cut(s)	1253
HpyCH4V	TGCA	9 cut(s)	188, 378, 584, 649, 820, 1088, 1353, 1568, 1718
HpyF10VI	GCNNNNNNNGC	6 cut(s)	740, 1007, 1495, 1802, 1811, 1937
HpyF3I	CTNAG	7 cut(s)	312, 410, 476, 488, 1533, 1635, 1738
HpySE526I	ACGT	1 cut(s)	1253
Hsp92II	CATG	7 cut(s)	125, 910, 1290, 1422, 1450, 1497, 1843
HspAI	GCGC	3 cut(s)	365, 492, 1782
Kpn2I	TCCGGA	1 cut(s)	1864
Ksp22I	TGATCA	2 cut(s)	370, 468
Kzo9I	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
LmnI	GCTCC	6 cut(s)	334, 382, 427, 786, 1753, 1801
Lsp1109I	GCAGC	9 cut(s)	320, 506, 721, 724, 1219, 1702, 1729, 1732, 1826
LweI	GCATC	2 cut(s)	922, 1216
MaeI	CTAG	2 cut(s)	357, 608
MaeII	ACGT	1 cut(s)	1253
MaeIII	GTNAC	6 cut(s)	94, 128, 283, 413, 1576, 1649
MalI	GATC	8 cut(s)	77, 299, 372, 470, 500, 614, 806, 1558
MbiI	CCGCTC	1 cut(s)	789
MboI	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
MfeI	CAATTG	1 cut(s)	1791
MflI	RGATCY	1 cut(s)	1556
MhlI	GDGCHC	3 cut(s)	190, 1355, 1982
MlsI	TGGCCA	1 cut(s)	642
MluCI	AATT	6 cut(s)	437, 631, 967, 1791, 1833, 1956
MluI	ACGCGT	1 cut(s)	396
MluNI	TGGCCA	1 cut(s)	642
MlyI	GAGTC	4 cut(s)	125, 867, 1118, 1781
MmeI	TCCRAC	3 cut(s)	381, 997, 1823
Mox20I	TGGCCA	1 cut(s)	642
MroI	TCCGGA	1 cut(s)	1864
MroXI	GAANNNNTTC	2 cut(s)	528, 1454
MscI	TGGCCA	1 cut(s)	642
MseI	TTAA	5 cut(s)	228, 267, 279, 864, 1878
MslI	CAYNNNNRTG	1 cut(s)	126
Msp20I	TGGCCA	1 cut(s)	642
MspA1I	CMGCKG	3 cut(s)	1061, 1715, 1742
MspR9I	CCNGG	8 cut(s)	657, 1554, 1574, 1665, 1709, 1752, 1823, 1910
MunI	CAATTG	1 cut(s)	1791
Mva1269I	GAATGC	1 cut(s)	553
MvaI	CCWGG	2 cut(s)	1665, 1752
MvnI	CGCG	1 cut(s)	398
MwoI	GCNNNNNNNGC	6 cut(s)	740, 1007, 1495, 1802, 1811, 1937
NciI	CCSGG	6 cut(s)	657, 1554, 1574, 1709, 1823, 1910
NcoI	CCATGG	2 cut(s)	1418, 1493
NdeII	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
NheI	GCTAGC	1 cut(s)	607
NlaIII	CATG	7 cut(s)	125, 910, 1290, 1422, 1450, 1497, 1843
NlaIV	GGNNCC	4 cut(s)	937, 1204, 1558, 1706
NmuCI	GTSAC	2 cut(s)	128, 1649
NspI	RCATGY	1 cut(s)	1290
NspV	TTCGAA	1 cut(s)	1050
PaeI	GCATGC	1 cut(s)	1290
PagI	TCATGA	1 cut(s)	1446
PaqCI	CACCTGC	1 cut(s)	459
PceI	AGGCCT	1 cut(s)	1692
PcsI	WCGNNNNNNNCGW	2 cut(s)	15, 402
PctI	GAATGC	1 cut(s)	553
PdmI	GAANNNNTTC	2 cut(s)	528, 1454
PfeI	GAWTC	8 cut(s)	23, 347, 652, 690, 1131, 1325, 1590, 1660
Pfl23II	CGTACG	1 cut(s)	6
PflFI	GACNNNGTC	1 cut(s)	907
PleI	GAGTC	4 cut(s)	125, 867, 1117, 1781
PpsI	GAGTC	4 cut(s)	125, 867, 1117, 1781
Psp124BI	GAGCTC	1 cut(s)	1982
Psp6I	CCWGG	2 cut(s)	1663, 1750
PspEI	GGTNACC	1 cut(s)	94
PspFI	CCCAGC	3 cut(s)	1061, 1700, 1810
PspGI	CCWGG	2 cut(s)	1663, 1750
PspLI	CGTACG	1 cut(s)	6
PspN4I	GGNNCC	4 cut(s)	937, 1204, 1558, 1706
PspPI	GGNCC	3 cut(s)	935, 1537, 1550
PstNI	CAGNNNCTG	1 cut(s)	1745
PsuI	RGATCY	1 cut(s)	1556
PsyI	GACNNNGTC	1 cut(s)	907
PvuII	CAGCTG	1 cut(s)	1742
RsaI	GTAC	7 cut(s)	8, 44, 997, 1192, 1252, 1640, 1682
RsaNI	GTAC	7 cut(s)	7, 43, 996, 1191, 1251, 1639, 1681
RseI	CAYNNNNRTG	1 cut(s)	126
SacI	GAGCTC	1 cut(s)	1982
SalI	GTCGAC	1 cut(s)	672
SaqAI	TTAA	5 cut(s)	228, 267, 279, 864, 1878
Sau3AI	GATC	8 cut(s)	75, 297, 370, 468, 498, 612, 804, 1556
Sau96I	GGNCC	3 cut(s)	935, 1537, 1550
SchI	GAGTC	4 cut(s)	125, 867, 1118, 1781
ScrFI	CCNGG	8 cut(s)	657, 1554, 1574, 1665, 1709, 1752, 1823, 1910
SduI	GDGCHC	3 cut(s)	190, 1355, 1982
SfaNI	GCATC	2 cut(s)	922, 1216
SfcI	CTRYAG	2 cut(s)	1126, 1686
SfuI	TTCGAA	1 cut(s)	1050
SinI	GGWCC	3 cut(s)	935, 1537, 1550
SmiMI	CAYNNNNRTG	1 cut(s)	126
SmlI	CTYRAG	3 cut(s)	1479, 1514, 1619
SmoI	CTYRAG	3 cut(s)	1479, 1514, 1619
SphI	GCATGC	1 cut(s)	1290
Sse9I	AATT	6 cut(s)	437, 631, 967, 1791, 1833, 1956
SseBI	AGGCCT	1 cut(s)	1692
SsiI	CCGC	9 cut(s)	92, 741, 789, 999, 1059, 1082, 1229, 1560, 1713
SspI	AATATT	1 cut(s)	1430
SspMI	CTAG	2 cut(s)	357, 608
SstI	GAGCTC	1 cut(s)	1982
StuI	AGGCCT	1 cut(s)	1692
StyD4I	CCNGG	8 cut(s)	655, 1552, 1572, 1663, 1707, 1750, 1821, 1908
StyI	CCWWGG	5 cut(s)	1319, 1345, 1418, 1493, 1645
TaaI	ACNGT	9 cut(s)	100, 128, 668, 995, 1006, 1127, 1172, 1250, 1307
TaiI	ACGT	1 cut(s)	1256
TasI	AATT	6 cut(s)	437, 631, 967, 1791, 1833, 1956
TatI	WGTACW	1 cut(s)	1638
TauI	GCSGC	3 cut(s)	743, 1232, 1715
TfiI	GAWTC	8 cut(s)	23, 347, 652, 690, 1131, 1325, 1590, 1660
Tru1I	TTAA	5 cut(s)	228, 267, 279, 864, 1878
Tru9I	TTAA	5 cut(s)	228, 267, 279, 864, 1878
TscAI	CASTG	2 cut(s)	1009, 1336
TseFI	GTSAC	2 cut(s)	128, 1649
TseI	GCWGC	9 cut(s)	308, 494, 734, 737, 1232, 1715, 1742, 1745, 1814
Tsp45I	GTSAC	2 cut(s)	128, 1649
TspDTI	ATGAA	9 cut(s)	36, 305, 578, 825, 913, 1018, 1447, 1463, 1908
TspGWI	ACGGA	9 cut(s)	24, 151, 317, 1172, 1668, 1784, 1910, 1940, 1988
TspRI	CASTG	2 cut(s)	1009, 1336
Tth111I	GACNNNGTC	1 cut(s)	907
VneI	GTGCAC	2 cut(s)	186, 1351
VpaK11BI	GGWCC	3 cut(s)	935, 1537, 1550
XapI	RAATTY	2 cut(s)	437, 631
XceI	RCATGY	1 cut(s)	1290
XmiI	GTMKAC	2 cut(s)	673, 705
XmnI	GAANNNNTTC	2 cut(s)	528, 1454
XspI	CTAG	2 cut(s)	357, 608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.