Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000809

Physical Location & Seq

Genomic Coordinates Reverse (-)

19940462 .. 19943015

Gene Structure 2554 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G49180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGGGGTTGATGGTGAACTGAAAAAGAAGAAATGCATCATTGCTGGGGTTATCACAGCCTTGCTCGTTCTCATGGTTGTCGCTGTTGGCATCACAACATCAAGAAACACCAGTCATTCAGAAAAAATCGTCCCTGTGCAGATTAAAACAGCCACCACGGCAGTTGAAGCAGTTTGTGCACCTACTGATTACAAAGAGACTTGTGTCAATAGTCTCATGAAAGCTTCTCCTGACTCTACTCAGCCTCTTGATCTCATTAAGCTTGGCTTCAACGTCACCATTCGATCCATAGAAGATAGCATCAAGAAAGCTTCCGTGGAGCTGACAGCCAAGGCAGCTAATGACAAGGATACCAAAGGGGCTTTGGAGTTGTGTGAGAAGCTTATGAATGATGCTACAGATGATCTGAAGAAGTGTCTTGATAACTTTGATGGGTTCTCAATTCCTCAGATTGAGGACTTTGTCGAAGATCTTCGTGTTTGGCTTAGTGGCTCCATTGCTTATCAACAAACATGTATGGATACGTTTGAAGAAACTAACTCGAAACTTTCACAAGACATGCAGAAAATCTTTAAAACATCTAGAGAACTCACTAGTAATGGCCTTGCCATGATTACTAACATCTCTAACCTTCTCGGAGAGTTCAACGTCACAGGAGTAACCGGGGATCTCGGTAAATACGCAAGAAAACTTTTGTCGGCGGAAGACGGTATACCAAGTTGGGTTGGACCAAACACTAGACGGCTCATGGCAACGAAAGGAGGTGTGAAAGCTAACGTGGTGGTTGCACACGACGGAAGTGGTCAGTACAAGACTATCAATGAAGCCTTGAATGCAGTGCCTAAAGCCAACCAAAAGCCATTTGTTATCTACATTAAGCAAGGTGTCTATAACGAGAAAGTTGACGTCACCAAGAAAATGACTCATGTCACTTTCATCGGTGATGGACCAACCAAAACTAAGATCACTGGTAGTCTCAACTATTACATTGGCAAGGTCAAGACATACCTTACTGCCACTGTTGCGATCAATGGTGATAACTTCACGGCGAAGAACATCGGGTTTGAAAACACTGCAGGTCCCGAAGGACATCAAGCTGTGGCCCTAAGAGTCTCGGCGGATTTGGCCGTCTTCTACAACTGCCAAATCGATGGTTACCAAGACACACTCTACGTCCATTCTCATCGTCAATTCTTCCGTGACTGCACAGTCTCGGGCACCGTTGACTTCATTTTCGGCGATGGTATAGTAGTCTTACAAAACTGTAACATTGTTGTGAGAAAACCCATGAAAAGTCAGTCTTGCATGATCACAGCCCAAGGCCGCTCCGATAAACGTGAATCCACCGGACTCGTGCTACAAAACTGCCATATTACCGGAGAACCAGCGTATATTCCCGTAAAATCTATAAACAAAGCATATCTTGGAAGGCCATGGAAAGAGTTTTCAAGAACCATTATAATGGGAACAACCATAGACGACGTTATTGATCCAGCGGGATGGCTTCCTTGGAATGGTGATTTTGCACTTAATACGCTTTACTATGCTGAGTATGAGAATAATGGGCCTGGGTCAAACCAAGCCCAACGTGTTAAGTGGCCTGGAATTAAGAAACTATCGCCCAAGCAAGCTCTTCGATTTACTCCTGCTAGGTTTTTACGTGGTAACTTGTGGATTCCACCAAATCGTGTGCCTTACATGGGGAATTTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0003006 GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0005975 GO:0005976 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010393 GO:0016051 GO:0016787 GO:0016788 GO:0017144 GO:0022414 GO:0030234 GO:0030599 GO:0032501 GO:0032502 GO:0043086 GO:0043170 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044464 GO:0045488 GO:0045489 GO:0046910 GO:0048316 GO:0048358 GO:0048359 GO:0048363 GO:0048608 GO:0048731 GO:0048856 GO:0050790 GO:0052689 GO:0061458 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0098772 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

571

Amino Acids

62.8

Weight (kDa)

8.8

Isoelectric Point (pI)

29.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	54 - 204	2.3e-29	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	259 - 556	1.1e-146	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05610 AT3G06830 AT4G15980 AT4G15980 AT5G27870 AT5G49180
fragaria_vesca	FvH4_4g18670 FvH4_4g18670 FvH4_4g18670 FvH4_4g18690 FvH4_4g18690
malus_domestica	MD04G1198100.v1.1 MD12G1210700.v1.1 MD13G1164500.v1.1 MD13G1164600.v1.1 MD13G1164700.v1.1 MD13G1164800.v1.1 MD16G1164200.v1.1 MD16G1164300.v1.1
prunus_persica	Prupe.1G123500_v2.0.a1 Prupe.1G123700_v2.0.a1 Prupe.1G123800_v2.0.a1 Prupe.1G131900_v2.0.a1 Prupe.1G132000_v2.0.a1 Prupe.1G132300_v2.0.a1 Prupe.6G318600_v2.0.a1
pyrus_communis	pycom13g14040
rosa_chinensis	RchiOBHm_Chr2g0115181 RchiOBHm_Chr3g0456331 RchiOBHm_Chr4g0423371 RchiOBHm_Chr4g0423391
rosa_laevigata	RLG00000007564 RLG00000007566 RLG00000018164 RLG00000025312
rosa_multiflora	Rmu_co8436939.1_g000001 Rmu_sc0002607.1_g000023 Rmu_sc0002784.1_g000024 Rmu_sc0005307.1_g000019 Rmu_sc0018054.1_g000005 Rmu_sc0031272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130660 Rroxscaffold_5G00365560 Rroxscaffold_5G00365590
rosa_rugosa	Rorug02G0194200 Rorug04G0186900 Rorug04G0187000 Rorug04G0187100 Rorug04G0187200
rosa_samantha	Rh2AG252700 Rh2BG262300 Rh2CG257300 Rh2DG260900 Rh3BG074700 Rh3CG074300 Rh3DG076200 Rh4AG246000 Rh4AG246100 Rh4BG251500 Rh4BG251600 Rh4CG259800 Rh4CG260100 Rh4DG246400 Rh4DG247000
rosa_wichuraiana	Rw2G019710 Rw3G006230 Rw4G021140 Rw4G021150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1460
AasI	GACNNNNNNGTC	1 cut(s)	1208
AatII	GACGTC	1 cut(s)	909
Acc36I	ACCTGC	1 cut(s)	1067
AccB1I	GGYRCC	1 cut(s)	1217
AccBSI	CCGCTC	1 cut(s)	1326
AccI	GTMKAC	1 cut(s)	712
AciI	CCGC	4 cut(s)	701, 1118, 1324, 1496
AclWI	GGATC	3 cut(s)	279, 675, 1484
AcoI	YGGCCR	1 cut(s)	1125
AcsI	RAATTY	1 cut(s)	1705
AcuI	CTGAAG	1 cut(s)	428
AcyI	GRCGYC	1 cut(s)	906
AfaI	GTAC	1 cut(s)	809
AfiI	CCNNNNNNNGG	2 cut(s)	1514, 1700
AflIII	ACRYGT	2 cut(s)	512, 1588
AgsI	TTSAA	7 cut(s)	167, 271, 530, 646, 832, 1067, 1449
AhlI	ACTAGT	1 cut(s)	593
AjnI	CCWGG	2 cut(s)	1567, 1600
AluBI	AGCT	9 cut(s)	224, 262, 311, 322, 338, 382, 773, 1097, 1631
AluI	AGCT	9 cut(s)	224, 262, 311, 322, 338, 382, 773, 1097, 1631
Alw21I	GWGCWC	1 cut(s)	181
Alw26I	GTCTC	5 cut(s)	191, 218, 980, 1117, 1216
Alw44I	GTGCAC	1 cut(s)	177
AlwI	GGATC	3 cut(s)	279, 675, 1484
Ama87I	CYCGRG	1 cut(s)	1213
AoxI	GGCC	7 cut(s)	601, 1101, 1125, 1321, 1430, 1565, 1598
ApaLI	GTGCAC	1 cut(s)	177
ApeKI	GCWGC	1 cut(s)	335
ApoI	RAATTY	1 cut(s)	1705
ArsI	GACNNNNNNTTYG	2 cut(s)	1217, 1249
Asp700I	GAANNNNTTC	1 cut(s)	471
AspS9I	GGNCC	5 cut(s)	728, 947, 1079, 1102, 1565
AsuC2I	CCSGG	1 cut(s)	664
AsuHPI	GGTGA	6 cut(s)	26, 268, 901, 953, 1046, 1529
AvaI	CYCGRG	1 cut(s)	1213
AvaII	GGWCC	3 cut(s)	728, 947, 1079
BaeGI	GKGCMC	2 cut(s)	181, 1220
BanI	GGYRCC	1 cut(s)	1217
BarI	GAAGNNNNNNTAC	2 cut(s)	696, 728
BauI	CACGAG	1 cut(s)	1352
BbsI	GAAGAC	2 cut(s)	711, 1123
Bbv12I	GWGCWC	1 cut(s)	181
BbvI	GCAGC	1 cut(s)	347
BccI	CCATC	6 cut(s)	5, 425, 938, 1145, 1235, 1494
BceAI	ACGGC	4 cut(s)	174, 758, 1062, 1112
BcgI	CGANNNNNNTGC	2 cut(s)	1616, 1650
BciT130I	CCWGG	2 cut(s)	1569, 1602
BciVI	GTATCC	2 cut(s)	343, 514
BclI	TGATCA	1 cut(s)	1308
BcnI	CCSGG	1 cut(s)	664
BcoDI	GTCTC	5 cut(s)	191, 218, 980, 1117, 1216
BcuI	ACTAGT	1 cut(s)	593
BfaI	CTAG	4 cut(s)	582, 594, 738, 1650
BfmI	CTRYAG	2 cut(s)	396, 1074
BfuAI	ACCTGC	1 cut(s)	1067
BfuI	GTATCC	2 cut(s)	343, 514
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	1 cut(s)	469
BisI	GCNGC	2 cut(s)	336, 1324
BlsI	GCNGC	2 cut(s)	337, 1325
Bme1390I	CCNGG	3 cut(s)	664, 1569, 1602
Bme18I	GGWCC	3 cut(s)	728, 947, 1079
BmeT110I	CYCGRG	1 cut(s)	1213
BmgT120I	GGNCC	5 cut(s)	728, 947, 1079, 1102, 1565
BmiI	GGNNCC	3 cut(s)	493, 1081, 1219
BmrFI	CCNGG	3 cut(s)	664, 1569, 1602
BmsI	GCATC	4 cut(s)	45, 99, 309, 382
BoxI	GACNNNNGTC	2 cut(s)	203, 926
BpiI	GAAGAC	2 cut(s)	711, 1123
BpuMI	CCSGG	1 cut(s)	664
Bsa29I	ATCGAT	1 cut(s)	1149
BsaAI	YACGTR	1 cut(s)	1661
BsaHI	GRCGYC	1 cut(s)	906
BsaJI	CCNNGG	8 cut(s)	156, 315, 330, 663, 1318, 1433, 1508, 1568
BsaWI	WCCGGW	2 cut(s)	1346, 1376
Bsc4I	CCNNNNNNNGG	2 cut(s)	1514, 1700
Bse1I	ACTGG	2 cut(s)	111, 973
Bse3DI	GCAATG	2 cut(s)	39, 495
BseBI	CCWGG	2 cut(s)	1569, 1602
BseCI	ATCGAT	1 cut(s)	1149
BseDI	CCNNGG	8 cut(s)	156, 315, 330, 663, 1318, 1433, 1508, 1568
BseGI	GGATG	1 cut(s)	1505
BseLI	CCNNNNNNNGG	2 cut(s)	1514, 1700
BseMI	GCAATG	2 cut(s)	39, 495
BseMII	CTCAG	3 cut(s)	254, 461, 1539
BseNI	ACTGG	2 cut(s)	111, 973
BseSI	GKGCMC	2 cut(s)	181, 1220
BseXI	GCAGC	1 cut(s)	347
BseYI	CCCAGC	1 cut(s)	44
BsgI	GTGCAG	2 cut(s)	158, 1189
BshFI	GGCC	7 cut(s)	603, 1103, 1127, 1323, 1432, 1567, 1600
BshNI	GGYRCC	1 cut(s)	1217
BshVI	ATCGAT	1 cut(s)	1149
BsiHKAI	GWGCWC	1 cut(s)	181
BsiHKCI	CYCGRG	1 cut(s)	1213
BsiSI	CCGG	3 cut(s)	663, 1347, 1377
BslFI	GGGAC	2 cut(s)	116, 1065
BslI	CCNNNNNNNGG	2 cut(s)	1514, 1700
BsmAI	GTCTC	5 cut(s)	191, 218, 980, 1117, 1216
BsmFI	GGGAC	2 cut(s)	116, 1065
BsmI	GAATGC	1 cut(s)	838
BsnI	GGCC	7 cut(s)	603, 1103, 1127, 1323, 1432, 1567, 1600
BsoBI	CYCGRG	1 cut(s)	1213
Bsp1286I	GDGCHC	2 cut(s)	181, 1220
Bsp143I	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
Bsp19I	CCATGG	1 cut(s)	1433
BspACI	CCGC	4 cut(s)	701, 1118, 1324, 1496
BspANI	GGCC	7 cut(s)	603, 1103, 1127, 1323, 1432, 1567, 1600
BspCNI	CTCAG	3 cut(s)	253, 460, 1540
BspDI	ATCGAT	1 cut(s)	1149
BspHI	TCATGA	1 cut(s)	216
BspLI	GGNNCC	3 cut(s)	493, 1081, 1219
BspMAI	CTGCAG	1 cut(s)	1078
BspMI	ACCTGC	1 cut(s)	1067
BspPI	GGATC	3 cut(s)	279, 675, 1484
BspQI	GCTCTTC	1 cut(s)	1638
BspT107I	GGYRCC	1 cut(s)	1217
BsrBI	CCGCTC	1 cut(s)	1326
BsrDI	GCAATG	2 cut(s)	39, 495
BsrI	ACTGG	2 cut(s)	111, 973
BssECI	CCNNGG	8 cut(s)	156, 315, 330, 663, 1318, 1433, 1508, 1568
BssMI	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
BssNAI	GTATAC	1 cut(s)	713
BssNI	GRCGYC	1 cut(s)	906
BssSI	CACGAG	1 cut(s)	1352
BssT1I	CCWWGG	4 cut(s)	330, 1318, 1433, 1508
Bst1107I	GTATAC	1 cut(s)	713
Bst2BI	CACGAG	1 cut(s)	1352
Bst2UI	CCWGG	2 cut(s)	1569, 1602
Bst4CI	ACNGT	5 cut(s)	710, 1021, 1210, 1222, 1265
Bst6I	CTCTTC	1 cut(s)	1638
BstACI	GRCGYC	1 cut(s)	906
BstAPI	GCANNNNNTGC	1 cut(s)	176
BstBAI	YACGTR	1 cut(s)	1661
BstC8I	GCNNGC	1 cut(s)	1629
BstDEI	CTNAG	6 cut(s)	240, 447, 485, 960, 1106, 1548
BstDSI	CCRYGG	3 cut(s)	156, 315, 1433
BstEII	GGTNACC	1 cut(s)	1154
BstF5I	GGATG	1 cut(s)	1505
BstKTI	GATC	9 cut(s)	253, 287, 406, 472, 670, 966, 1029, 1311, 1492
BstMAI	GTCTC	5 cut(s)	191, 218, 980, 1117, 1216
BstMBI	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
BstMWI	GCNNNNNNNGC	7 cut(s)	158, 167, 176, 335, 833, 1022, 1124
BstNI	CCWGG	2 cut(s)	1569, 1602
BstNSI	RCATGY	2 cut(s)	516, 562
BstPAI	GACNNNNGTC	2 cut(s)	203, 926
BstPI	GGTNACC	1 cut(s)	1154
BstSCI	CCNGG	3 cut(s)	662, 1567, 1600
BstSFI	CTRYAG	2 cut(s)	396, 1074
BstSLI	GKGCMC	2 cut(s)	181, 1220
BstV1I	GCAGC	1 cut(s)	347
BstV2I	GAAGAC	2 cut(s)	711, 1123
BstX2I	RGATCY	2 cut(s)	469, 667
BstXI	CCANNNNNNTGG	3 cut(s)	1151, 1462, 1500
BstYI	RGATCY	2 cut(s)	469, 667
BstZ17I	GTATAC	1 cut(s)	713
Bsu15I	ATCGAT	1 cut(s)	1149
BsuI	GTATCC	2 cut(s)	343, 514
BsuRI	GGCC	7 cut(s)	603, 1103, 1127, 1323, 1432, 1567, 1600
BsuTUI	ATCGAT	1 cut(s)	1149
BtgI	CCRYGG	3 cut(s)	156, 315, 1433
BtgZI	GCGATG	1 cut(s)	1254
BtsCI	GGATG	1 cut(s)	1505
BtsI	GCAGTG	2 cut(s)	843, 1071
BtsIMutI	CAGTG	4 cut(s)	843, 966, 1017, 1071
BveI	ACCTGC	1 cut(s)	1067
Cac8I	GCNNGC	1 cut(s)	1629
CciI	TCATGA	1 cut(s)	216
Cfr13I	GGNCC	5 cut(s)	728, 947, 1079, 1102, 1565
ClaI	ATCGAT	1 cut(s)	1149
Csp6I	GTAC	1 cut(s)	808
CspCI	CAANNNNNGTGG	2 cut(s)	145, 180
CviQI	GTAC	1 cut(s)	808
DdeI	CTNAG	6 cut(s)	240, 447, 485, 960, 1106, 1548
DpnI	GATC	9 cut(s)	252, 286, 405, 471, 669, 965, 1028, 1310, 1491
DpnII	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
DraI	TTTAAA	1 cut(s)	574
DrdI	GACNNNNNNGTC	1 cut(s)	1208
DseDI	GACNNNNNNGTC	1 cut(s)	1208
EaeI	YGGCCR	1 cut(s)	1125
Eam1104I	CTCTTC	1 cut(s)	1638
EarI	CTCTTC	1 cut(s)	1638
EciI	GGCGGA	2 cut(s)	716, 1133
Eco130I	CCWWGG	4 cut(s)	330, 1318, 1433, 1508
Eco47I	GGWCC	3 cut(s)	728, 947, 1079
Eco57I	CTGAAG	1 cut(s)	428
Eco88I	CYCGRG	1 cut(s)	1213
Eco91I	GGTNACC	1 cut(s)	1154
EcoO109I	RGGNCCY	1 cut(s)	1079
EcoO65I	GGTNACC	1 cut(s)	1154
EcoRII	CCWGG	2 cut(s)	1567, 1600
EcoT14I	CCWWGG	4 cut(s)	330, 1318, 1433, 1508
EcoT22I	ATGCAT	1 cut(s)	38
ErhI	CCWWGG	4 cut(s)	330, 1318, 1433, 1508
FalI	AAGNNNNNCTT	6 cut(s)	251, 283, 1285, 1317, 1407, 1439
FaqI	GGGAC	2 cut(s)	116, 1065
FauI	CCCGC	1 cut(s)	1489
FbaI	TGATCA	1 cut(s)	1308
FblI	GTMKAC	1 cut(s)	712
Fnu4HI	GCNGC	2 cut(s)	336, 1324
FokI	GGATG	1 cut(s)	1512
Fsp4HI	GCNGC	2 cut(s)	336, 1324
FspBI	CTAG	4 cut(s)	582, 594, 738, 1650
GluI	GCNGC	2 cut(s)	336, 1324
GsaI	CCCAGC	1 cut(s)	48
HaeIII	GGCC	7 cut(s)	603, 1103, 1127, 1323, 1432, 1567, 1600
HapII	CCGG	3 cut(s)	663, 1347, 1377
Hin1I	GRCGYC	1 cut(s)	906
HincII	GTYRAC	2 cut(s)	904, 1225
HindII	GTYRAC	2 cut(s)	904, 1225
HindIII	AAGCTT	4 cut(s)	222, 260, 309, 380
HinfI	GANTC	6 cut(s)	233, 922, 1110, 1340, 1350, 1675
HpaII	CCGG	3 cut(s)	663, 1347, 1377
HphI	GGTGA	6 cut(s)	26, 268, 901, 953, 1046, 1529
Hpy166II	GTNNAC	5 cut(s)	17, 179, 713, 904, 1225
Hpy188I	TCNGA	5 cut(s)	121, 408, 450, 638, 1330
Hpy8I	GTNNAC	5 cut(s)	17, 179, 713, 904, 1225
Hpy99I	CGWCG	2 cut(s)	797, 1484
HpyAV	CCTTC	3 cut(s)	641, 1079, 1422
HpyCH4III	ACNGT	5 cut(s)	710, 1021, 1210, 1222, 1265
HpyF10VI	GCNNNNNNNGC	7 cut(s)	158, 167, 176, 335, 833, 1022, 1124
HpyF3I	CTNAG	6 cut(s)	240, 447, 485, 960, 1106, 1548
Hsp92I	GRCGYC	1 cut(s)	906
Ksp22I	TGATCA	1 cut(s)	1308
Kzo9I	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
LguI	GCTCTTC	1 cut(s)	1638
LmnI	GCTCC	3 cut(s)	319, 497, 1331
Lsp1109I	GCAGC	1 cut(s)	347
LweI	GCATC	4 cut(s)	45, 99, 309, 382
MaeI	CTAG	4 cut(s)	582, 594, 738, 1650
MaeIII	GTNAC	9 cut(s)	274, 649, 658, 907, 928, 1154, 1199, 1265, 1664
MalI	GATC	9 cut(s)	252, 286, 405, 471, 669, 965, 1028, 1310, 1491
MbiI	CCGCTC	1 cut(s)	1326
MboI	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
MflI	RGATCY	2 cut(s)	469, 667
MhlI	GDGCHC	2 cut(s)	181, 1220
MluCI	AATT	4 cut(s)	441, 1190, 1605, 1705
MlyI	GAGTC	4 cut(s)	227, 916, 1119, 1344
MmeI	TCCRAC	1 cut(s)	706
MnlI	CCTC	4 cut(s)	255, 448, 456, 755
Mph1103I	ATGCAT	1 cut(s)	38
MroXI	GAANNNNTTC	1 cut(s)	471
MseI	TTAA	7 cut(s)	144, 258, 573, 876, 1530, 1593, 1608
MslI	CAYNNNNRTG	2 cut(s)	1274, 1460
MspA1I	CMGCKG	1 cut(s)	1496
MspI	CCGG	3 cut(s)	663, 1347, 1377
MspR9I	CCNGG	3 cut(s)	664, 1569, 1602
Mva1269I	GAATGC	1 cut(s)	838
MvaI	CCWGG	2 cut(s)	1569, 1602
MwoI	GCNNNNNNNGC	7 cut(s)	158, 167, 176, 335, 833, 1022, 1124
NciI	CCSGG	1 cut(s)	664
NcoI	CCATGG	1 cut(s)	1433
NdeII	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
NlaIV	GGNNCC	3 cut(s)	493, 1081, 1219
NmeAIII	GCCGAG	1 cut(s)	1094
NmuCI	GTSAC	5 cut(s)	274, 649, 907, 928, 1199
NsiI	ATGCAT	1 cut(s)	38
NspI	RCATGY	2 cut(s)	516, 562
PagI	TCATGA	1 cut(s)	216
PciI	ACATGT	1 cut(s)	512
PciSI	GCTCTTC	1 cut(s)	1638
PctI	GAATGC	1 cut(s)	838
PdmI	GAANNNNTTC	1 cut(s)	471
PfeI	GAWTC	2 cut(s)	1340, 1675
PflFI	GACNNNGTC	1 cut(s)	461
PkrI	GCNGC	2 cut(s)	337, 1325
PleI	GAGTC	4 cut(s)	227, 916, 1118, 1344
PpsI	GAGTC	4 cut(s)	227, 916, 1118, 1344
Ppu21I	YACGTR	1 cut(s)	1661
PpuMI	RGGWCCY	1 cut(s)	1079
PscI	ACATGT	1 cut(s)	512
PshAI	GACNNNNGTC	2 cut(s)	203, 926
PsiI	TTATAA	1 cut(s)	1460
Psp5II	RGGWCCY	1 cut(s)	1079
Psp6I	CCWGG	2 cut(s)	1567, 1600
PspEI	GGTNACC	1 cut(s)	1154
PspFI	CCCAGC	1 cut(s)	44
PspGI	CCWGG	2 cut(s)	1567, 1600
PspN4I	GGNNCC	3 cut(s)	493, 1081, 1219
PspPI	GGNCC	5 cut(s)	728, 947, 1079, 1102, 1565
PspPPI	RGGWCCY	1 cut(s)	1079
PstI	CTGCAG	1 cut(s)	1078
PsuI	RGATCY	2 cut(s)	469, 667
PsyI	GACNNNGTC	1 cut(s)	461
RsaI	GTAC	1 cut(s)	809
RsaNI	GTAC	1 cut(s)	808
RseI	CAYNNNNRTG	2 cut(s)	1274, 1460
SapI	GCTCTTC	1 cut(s)	1638
SaqAI	TTAA	7 cut(s)	144, 258, 573, 876, 1530, 1593, 1608
SatI	GCNGC	2 cut(s)	336, 1324
Sau3AI	GATC	9 cut(s)	250, 284, 403, 469, 667, 963, 1026, 1308, 1489
Sau96I	GGNCC	5 cut(s)	728, 947, 1079, 1102, 1565
SchI	GAGTC	4 cut(s)	227, 916, 1119, 1344
ScrFI	CCNGG	3 cut(s)	664, 1569, 1602
SduI	GDGCHC	2 cut(s)	181, 1220
SfaNI	GCATC	4 cut(s)	45, 99, 309, 382
SfcI	CTRYAG	2 cut(s)	396, 1074
SinI	GGWCC	3 cut(s)	728, 947, 1079
SmiMI	CAYNNNNRTG	2 cut(s)	1274, 1460
SpeI	ACTAGT	1 cut(s)	593
Sse9I	AATT	4 cut(s)	441, 1190, 1605, 1705
SsiI	CCGC	4 cut(s)	701, 1118, 1324, 1496
SspMI	CTAG	4 cut(s)	582, 594, 738, 1650
StyD4I	CCNGG	3 cut(s)	662, 1567, 1600
StyI	CCWWGG	4 cut(s)	330, 1318, 1433, 1508
TaaI	ACNGT	5 cut(s)	710, 1021, 1210, 1222, 1265
TaqI	TCGA	5 cut(s)	283, 465, 542, 1149, 1636
TasI	AATT	4 cut(s)	441, 1190, 1605, 1705
TatI	WGTACW	1 cut(s)	807
TauI	GCSGC	1 cut(s)	1326
TfiI	GAWTC	2 cut(s)	1340, 1675
Tru1I	TTAA	7 cut(s)	144, 258, 573, 876, 1530, 1593, 1608
Tru9I	TTAA	7 cut(s)	144, 258, 573, 876, 1530, 1593, 1608
TscAI	CASTG	4 cut(s)	843, 973, 1024, 1078
TseFI	GTSAC	5 cut(s)	274, 649, 907, 928, 1199
TseI	GCWGC	1 cut(s)	335
Tsp45I	GTSAC	5 cut(s)	274, 649, 907, 928, 1199
TspDTI	ATGAA	6 cut(s)	233, 401, 837, 925, 1219, 1304
TspGWI	ACGGA	3 cut(s)	304, 810, 1187
TspRI	CASTG	4 cut(s)	843, 973, 1024, 1078
Tth111I	GACNNNGTC	1 cut(s)	461
VneI	GTGCAC	1 cut(s)	177
VpaK11BI	GGWCC	3 cut(s)	728, 947, 1079
XapI	RAATTY	1 cut(s)	1705
XbaI	TCTAGA	1 cut(s)	581
XceI	RCATGY	2 cut(s)	516, 562
XcmI	CCANNNNNNNNNTGG	1 cut(s)	361
XmiI	GTMKAC	1 cut(s)	712
XmnI	GAANNNNTTC	1 cut(s)	471
XspI	CTAG	4 cut(s)	582, 594, 738, 1650
ZraI	GACGTC	1 cut(s)	907
Zsp2I	ATGCAT	1 cut(s)	38

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.