Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000809

Physical Location & Seq

Genomic Coordinates Reverse (-)

9057228 .. 9060114

Gene Structure 2887 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G15980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGAATAAATATGTCTTGTTAGGCGTCACGGCTCTCATTATGGCAATGGTCATTTGTGTAGAGGCCAACGATGGCAACAGCCCGAGTAGGAAAATGGAAGAGGTTCACCGTGAAAGCAAGCTGATGATAACAAAGACGACGGTGAGTATTATATGTGCCTCCACCGATTACAAACAAGATTGCACCACGAGTCTCGCAACCGTGAGGTCGCCGGATCCCCGAAATCTAATAAGATCTGCTTTTGACCTTGCTATCATCTCGATTCGAAGTGGAATCGACAGAGGGATGATTGATCTAAAGAGTAGAGCAGATGCCGATATGCACACAAGAGAAGCGCTTAATACTTGTAGAGAGCTTATGGATGATGCGATTGATGATCTTCGAAAAACGAGGGATAAATTTAGGGGATTTTTGTTCACTAGATTGTCAGACTTCGTTGAGGATCTTTGTGTGTGGCTTAGCGGATCAATCACATACCAACAGACGTGCATTGATGGATTTGAAGGGATTGATAGTGAAGCGGCCGTGATGATGGAGAGAGTCATGAGGAAGGGGCAGCATCTCACTAGCAATGGATTGGCGATTGCCGCAAATCTCGATAAATTATTGAAGGCTTTCCGTATTCCATTTCCATTTCTTAGGTCAAGAAGAGGCAGACTCGGCATTTTAGGTTCGGGTTCTTCACGAGACGAATCGGTGGGTTCTTCCCAAGATTCCCCTCCAAATGAAGATTCTTCTGATGATTCTCCTAGCACAGTGGACTCTTCGGAGAATCAACCAGTGGATTCTTCATCAGAAAATCAGTCGTCGGACTCTTCAAATAATAGACCATTAGATTCTTCCAAGAATCAACAAATGGAATCTTCCGAAGATACTCCTAAAAAATCGGCATTTTCAGGGAATCAACCATTAGACGACTCTTCCGATAAACTTCCTCAAAAATCGACTTCTTCTGAGAACCAACCGTTGGATTCCTCCGAGAACCCTCCTCAAAAATCAACTTCTAGCGAGAATCGACCGTTGGATCCTCTTCGCAAATTGAATCCCCTTAATAAATTGGATTCTTTGAAGGATCGACACTTATCGGAGGAAGGAGAGTTCCCGCCATGGGTAACACCGCATTCGCGGAGGCTTCTTGCACGTAGACCTAGAAATAATGGAATCAAAGCGAATGTTGTGGTTGCAAAGGACGGGAGTGGTAAGTGCAAGACTATCGCACAAGCATTGGCAATGGTACCAATGAAGAACACAAAGAAGTTTGTGATTCACATAAAGGAAGGTGTTTACAAGGAGAAAGTAGAGGTAACCAAAAAAATGCTACACGTCATGTTCGTTGGAGACGGACCAACAAAGACGGTTATCACTGGAGACATTGCCTTCTTACCAGACCAAGTCGGCACCTACCGCACCGCCTCCGTTGCGGTGAATGGGGACTATTTCATGGCAAAGGATATAGGGTTCGAGAACACGGCAGGAGCTGCACGCCATCAAGCAGTCGCACTCCGAGTTTCAGCCGACTTTGCTGTGTTCTTCAACTGTCATATGAATGGTTACCAAGACACGCTTTACGTCCATACTCATCGTCAATTCTACCGTAACTGCCGTGTCTCAGGCACGATCGATTTCGTCTTCGGTGACGCCAAGGCCGTTTTTCAGAACTGCGAATTCGTTATCCGCCGTCCCATGGAACACCAACAGTGCATCGTCACAGCACAAGGACGAAAAGACCGGCGTGAGACAACTGGGATTGTTATCCACAATAGCCGTATAACCGGTGATGCATCATATCTTCCCGTGAAAGCCAAGAACAGAGCATTTTTGGGACGGCCATGGAAAGAGTTTTCGAGGACAATTATAATGAACACAGAGATTGATGATGTGATAGACCCGGAAGGTTGGTTGAAGTGGAACGAGACGTTTGCGCTCAACACGTTGTTCTACACTGAGTACCGCAACAGAGGTCGTGGTTCGGGTCAGGGTCGTCGGGTTAGGTGGAGAGGTATCAAGCGGATCTCTGATAGAGCCGCAAGGGAGTTTGCTCCCGGGAATTTCTTACGTGGCAACACATGGATCCCACAAACGCGTATTCCATACAATGCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005576 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0048046 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

701

Amino Acids

78.57

Weight (kDa)

9.03

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	48 - 195	4.1e-26	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	391 - 688	5.4e-141	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05610 AT3G06830 AT4G15980 AT4G15980 AT5G27870 AT5G49180
fragaria_vesca	FvH4_4g18670 FvH4_4g18670 FvH4_4g18670 FvH4_4g18690 FvH4_4g18690
malus_domestica	MD04G1198100.v1.1 MD12G1210700.v1.1 MD13G1164500.v1.1 MD13G1164600.v1.1 MD13G1164700.v1.1 MD13G1164800.v1.1 MD16G1164200.v1.1 MD16G1164300.v1.1
prunus_persica	Prupe.1G123500_v2.0.a1 Prupe.1G123700_v2.0.a1 Prupe.1G123800_v2.0.a1 Prupe.1G131900_v2.0.a1 Prupe.1G132000_v2.0.a1 Prupe.1G132300_v2.0.a1 Prupe.6G318600_v2.0.a1
pyrus_communis	pycom13g14040
rosa_chinensis	RchiOBHm_Chr2g0115181 RchiOBHm_Chr3g0456331 RchiOBHm_Chr4g0423371 RchiOBHm_Chr4g0423391
rosa_laevigata	RLG00000007564 RLG00000007566 RLG00000018164 RLG00000025312
rosa_multiflora	Rmu_co8436939.1_g000001 Rmu_sc0002607.1_g000023 Rmu_sc0002784.1_g000024 Rmu_sc0005307.1_g000019 Rmu_sc0018054.1_g000005 Rmu_sc0031272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130660 Rroxscaffold_5G00365560 Rroxscaffold_5G00365590
rosa_rugosa	Rorug02G0194200 Rorug04G0186900 Rorug04G0187000 Rorug04G0187100 Rorug04G0187200
rosa_samantha	Rh2AG252700 Rh2BG262300 Rh2CG257300 Rh2DG260900 Rh3BG074700 Rh3CG074300 Rh3DG076200 Rh4AG246000 Rh4AG246100 Rh4BG251500 Rh4BG251600 Rh4CG259800 Rh4CG260100 Rh4DG246400 Rh4DG247000
rosa_wichuraiana	Rw2G019710 Rw3G006230 Rw4G021140 Rw4G021150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1856
Acc65I	GGTACC	1 cut(s)	1234
AccB1I	GGYRCC	2 cut(s)	1234, 1397
AccB7I	CCANNNNNTGG	1 cut(s)	967
AccI	GTMKAC	1 cut(s)	1144
AccII	CGCG	2 cut(s)	1126, 2083
AcoI	YGGCCR	2 cut(s)	522, 1826
AcsI	RAATTY	3 cut(s)	398, 1664, 2047
AcyI	GRCGYC	2 cut(s)	24, 1638
AfaI	GTAC	2 cut(s)	1236, 1949
AfeI	AGCGCT	1 cut(s)	336
AfiI	CCNNNNNNNGG	3 cut(s)	967, 1108, 1684
AflIII	ACRYGT	3 cut(s)	1321, 1929, 2081
AgeI	ACCGGT	1 cut(s)	1772
AgsI	TTSAA	7 cut(s)	503, 610, 819, 1042, 1069, 1534, 1903
AjiI	CACGTC	2 cut(s)	486, 1324
AjuI	GAANNNNNNNTTGG	6 cut(s)	715, 747, 950, 982, 1004, 1036
AloI	GAACNNNNNNTCC	4 cut(s)	1082, 1114, 1442, 1474
AluBI	AGCT	3 cut(s)	121, 355, 1478
AluI	AGCT	3 cut(s)	121, 355, 1478
Alw26I	GTCTC	7 cut(s)	197, 681, 1332, 1362, 1612, 1730, 1907
AlwNI	CAGNNNCTG	1 cut(s)	1478
Ama87I	CYCGRG	2 cut(s)	82, 2042
Aor51HI	AGCGCT	1 cut(s)	336
AoxI	GGCC	4 cut(s)	63, 522, 1644, 1826
ApeKI	GCWGC	2 cut(s)	556, 1478
ApoI	RAATTY	3 cut(s)	398, 1664, 2047
AsiGI	ACCGGT	1 cut(s)	1772
Asp700I	GAANNNNTTC	2 cut(s)	102, 614
Asp718I	GGTACC	1 cut(s)	1234
AspLEI	GCGC	2 cut(s)	337, 1924
AspS9I	GGNCC	1 cut(s)	1343
AsuC2I	CCSGG	3 cut(s)	1889, 2043, 2044
AsuHPI	GGTGA	5 cut(s)	98, 154, 1435, 1646, 1787
AsuII	TTCGAA	2 cut(s)	265, 382
AvaI	CYCGRG	2 cut(s)	82, 2042
AvaII	GGWCC	1 cut(s)	1343
BamHI	GGATCC	3 cut(s)	214, 1024, 2070
BanI	GGYRCC	2 cut(s)	1234, 1397
BauI	CACGAG	2 cut(s)	187, 684
BbsI	GAAGAC	1 cut(s)	1621
BbvI	GCAGC	2 cut(s)	568, 1465
BccI	CCATC	4 cut(s)	65, 488, 526, 1494
BceAI	ACGGC	8 cut(s)	45, 509, 1485, 1587, 1631, 1662, 1749, 1841
BcgI	CGANNNNNNTGC	4 cut(s)	1195, 1229, 1901, 1935
BcnI	CCSGG	3 cut(s)	1889, 2043, 2044
BcoDI	GTCTC	7 cut(s)	197, 681, 1332, 1362, 1612, 1730, 1907
BfaI	CTAG	5 cut(s)	420, 567, 750, 1005, 1149
BfoI	RGCGCY	1 cut(s)	338
BglII	AGATCT	1 cut(s)	233
BisI	GCNGC	5 cut(s)	522, 557, 588, 1479, 2025
BlpI	GCTNAGC	1 cut(s)	458
BlsI	GCNGC	5 cut(s)	523, 558, 589, 1480, 2026
Bme1390I	CCNGG	3 cut(s)	1889, 2043, 2044
Bme18I	GGWCC	1 cut(s)	1343
BmeT110I	CYCGRG	2 cut(s)	82, 2042
BmgBI	CACGTC	2 cut(s)	486, 1324
BmgT120I	GGNCC	1 cut(s)	1343
BmiI	GGNNCC	5 cut(s)	216, 1026, 1236, 1399, 2072
BmrFI	CCNGG	3 cut(s)	1889, 2043, 2044
BmrI	ACTGGG	1 cut(s)	1752
BmsI	GCATC	6 cut(s)	301, 355, 568, 1710, 1768, 1790
BmuI	ACTGGG	1 cut(s)	1752
BpiI	GAAGAC	1 cut(s)	1621
BplI	GAGNNNNNCTC	2 cut(s)	642, 674
BpmI	CTGGAG	1 cut(s)	1386
Bpu1102I	GCTNAGC	1 cut(s)	458
Bpu14I	TTCGAA	2 cut(s)	265, 382
BpuMI	CCSGG	3 cut(s)	1889, 2043, 2044
Bsa29I	ATCGAT	1 cut(s)	1620
BsaAI	YACGTR	2 cut(s)	1142, 2057
BsaBI	GATNNNNATC	1 cut(s)	1751
BsaHI	GRCGYC	2 cut(s)	24, 1638
BsaJI	CCNNGG	5 cut(s)	1106, 1641, 1683, 1829, 2042
BsaWI	WCCGGW	1 cut(s)	1772
Bsc4I	CCNNNNNNNGG	3 cut(s)	967, 1108, 1684
Bse118I	RCCGGY	2 cut(s)	1728, 1772
Bse1I	ACTGG	3 cut(s)	779, 1369, 1747
Bse3DI	GCAATG	4 cut(s)	51, 577, 1236, 1371
Bse8I	GATNNNNATC	1 cut(s)	1751
BseCI	ATCGAT	1 cut(s)	1620
BseDI	CCNNGG	5 cut(s)	1106, 1641, 1683, 1829, 2042
BseGI	GGATG	2 cut(s)	291, 367
BseJI	GATNNNNATC	1 cut(s)	1751
BseLI	CCNNNNNNNGG	3 cut(s)	967, 1108, 1684
BseMI	GCAATG	4 cut(s)	51, 577, 1236, 1371
BseMII	CTCAG	3 cut(s)	945, 1623, 1935
BseNI	ACTGG	3 cut(s)	779, 1369, 1747
BseRI	GAGGAG	1 cut(s)	978
BseX3I	CGGCCG	1 cut(s)	522
BseXI	GCAGC	2 cut(s)	568, 1465
BsgI	GTGCAG	1 cut(s)	1464
Bsh1236I	CGCG	2 cut(s)	1126, 2083
Bsh1285I	CGRYCG	3 cut(s)	525, 1019, 1620
BshFI	GGCC	4 cut(s)	65, 524, 1646, 1828
BshNI	GGYRCC	2 cut(s)	1234, 1397
BshTI	ACCGGT	1 cut(s)	1772
BshVI	ATCGAT	1 cut(s)	1620
BsiEI	CGRYCG	3 cut(s)	525, 1019, 1620
BsiHKCI	CYCGRG	2 cut(s)	82, 2042
BsiSI	CCGG	5 cut(s)	212, 1729, 1773, 1889, 2043
BslFI	GGGAC	3 cut(s)	1445, 1665, 1836
BslI	CCNNNNNNNGG	3 cut(s)	967, 1108, 1684
BsmAI	GTCTC	7 cut(s)	197, 681, 1332, 1362, 1612, 1730, 1907
BsmBI	CGTCTC	3 cut(s)	681, 1332, 1907
BsmFI	GGGAC	3 cut(s)	1445, 1665, 1836
BsmI	GAATGC	1 cut(s)	1120
BsnI	GGCC	4 cut(s)	65, 524, 1646, 1828
BsoBI	CYCGRG	2 cut(s)	82, 2042
Bsp119I	TTCGAA	2 cut(s)	265, 382
Bsp1720I	GCTNAGC	1 cut(s)	458
Bsp19I	CCATGG	3 cut(s)	1106, 1683, 1829
BspANI	GGCC	4 cut(s)	65, 524, 1646, 1828
BspCNI	CTCAG	3 cut(s)	946, 1622, 1936
BspDI	ATCGAT	1 cut(s)	1620
BspFNI	CGCG	2 cut(s)	1126, 2083
BspHI	TCATGA	1 cut(s)	543
BspLI	GGNNCC	5 cut(s)	216, 1026, 1236, 1399, 2072
BspT104I	TTCGAA	2 cut(s)	265, 382
BspT107I	GGYRCC	2 cut(s)	1234, 1397
BsrDI	GCAATG	4 cut(s)	51, 577, 1236, 1371
BsrFI	RCCGGY	2 cut(s)	1728, 1772
BsrI	ACTGG	3 cut(s)	779, 1369, 1747
BssAI	RCCGGY	2 cut(s)	1728, 1772
BssECI	CCNNGG	5 cut(s)	1106, 1641, 1683, 1829, 2042
BssNI	GRCGYC	2 cut(s)	24, 1638
BssSI	CACGAG	2 cut(s)	187, 684
BssT1I	CCWWGG	4 cut(s)	1106, 1641, 1683, 1829
Bst2BI	CACGAG	2 cut(s)	187, 684
Bst6I	CTCTTC	6 cut(s)	93, 643, 769, 820, 925, 1035
BstACI	GRCGYC	2 cut(s)	24, 1638
BstAPI	GCANNNNNTGC	1 cut(s)	1478
BstBAI	YACGTR	2 cut(s)	1142, 2057
BstBI	TTCGAA	2 cut(s)	265, 382
BstC8I	GCNNGC	2 cut(s)	119, 1483
BstDEI	CTNAG	5 cut(s)	458, 638, 954, 1609, 1944
BstDSI	CCRYGG	3 cut(s)	1106, 1683, 1829
BstEII	GGTNACC	2 cut(s)	1303, 1550
BstF5I	GGATG	2 cut(s)	291, 367
BstFNI	CGCG	2 cut(s)	1126, 2083
BstH2I	RGCGCY	1 cut(s)	338
BstHHI	GCGC	2 cut(s)	337, 1924
BstMAI	GTCTC	7 cut(s)	197, 681, 1332, 1362, 1612, 1730, 1907
BstMCI	CGRYCG	3 cut(s)	525, 1019, 1620
BstMWI	GCNNNNNNNGC	6 cut(s)	587, 660, 1404, 1418, 1478, 1520
BstPI	GGTNACC	2 cut(s)	1303, 1550
BstSCI	CCNGG	3 cut(s)	1887, 2041, 2042
BstUI	CGCG	2 cut(s)	1126, 2083
BstV1I	GCAGC	2 cut(s)	568, 1465
BstV2I	GAAGAC	1 cut(s)	1621
BstX2I	RGATCY	6 cut(s)	214, 233, 442, 1024, 2010, 2070
BstYI	RGATCY	6 cut(s)	214, 233, 442, 1024, 2010, 2070
BstZI	CGGCCG	1 cut(s)	522
Bsu15I	ATCGAT	1 cut(s)	1620
BsuRI	GGCC	4 cut(s)	65, 524, 1646, 1828
BsuTUI	ATCGAT	1 cut(s)	1620
BtgI	CCRYGG	3 cut(s)	1106, 1683, 1829
BtrI	CACGTC	2 cut(s)	486, 1324
BtsCI	GGATG	2 cut(s)	291, 367
BtsIMutI	CAGTG	5 cut(s)	762, 786, 1362, 1703, 1941
Cac8I	GCNNGC	2 cut(s)	119, 1483
CaiI	CAGNNNCTG	1 cut(s)	1478
CciI	TCATGA	1 cut(s)	543
CfoI	GCGC	2 cut(s)	337, 1924
Cfr10I	RCCGGY	2 cut(s)	1728, 1772
Cfr13I	GGNCC	1 cut(s)	1343
Cfr9I	CCCGGG	1 cut(s)	2042
ClaI	ATCGAT	1 cut(s)	1620
CseI	GACGC	2 cut(s)	13, 1646
Csp6I	GTAC	2 cut(s)	1235, 1948
CspAI	ACCGGT	1 cut(s)	1772
CviAII	CATG	7 cut(s)	544, 1107, 1327, 1441, 1684, 1830, 2067
CviQI	GTAC	2 cut(s)	1235, 1948
DdeI	CTNAG	5 cut(s)	458, 638, 954, 1609, 1944
EaeI	YGGCCR	2 cut(s)	522, 1826
EagI	CGGCCG	1 cut(s)	522
Eam1104I	CTCTTC	6 cut(s)	93, 643, 769, 820, 925, 1035
EarI	CTCTTC	6 cut(s)	93, 643, 769, 820, 925, 1035
EciI	GGCGGA	1 cut(s)	1664
EclXI	CGGCCG	1 cut(s)	522
Eco130I	CCWWGG	4 cut(s)	1106, 1641, 1683, 1829
Eco47I	GGWCC	1 cut(s)	1343
Eco47III	AGCGCT	1 cut(s)	336
Eco52I	CGGCCG	1 cut(s)	522
Eco88I	CYCGRG	2 cut(s)	82, 2042
Eco91I	GGTNACC	2 cut(s)	1303, 1550
EcoO65I	GGTNACC	2 cut(s)	1303, 1550
EcoRI	GAATTC	1 cut(s)	1664
EcoT14I	CCWWGG	4 cut(s)	1106, 1641, 1683, 1829
EcoT22I	ATGCAT	1 cut(s)	1783
ErhI	CCWWGG	4 cut(s)	1106, 1641, 1683, 1829
Esp3I	CGTCTC	3 cut(s)	681, 1332, 1907
FaeI	CATG	7 cut(s)	547, 1110, 1330, 1444, 1687, 1833, 2070
FalI	AAGNNNNNCTT	4 cut(s)	223, 255, 1548, 1580
FaqI	GGGAC	3 cut(s)	1445, 1665, 1836
FatI	CATG	7 cut(s)	543, 1106, 1326, 1440, 1683, 1829, 2066
FauI	CCCGC	1 cut(s)	1110
FauNDI	CATATG	1 cut(s)	1542
FblI	GTMKAC	1 cut(s)	1144
Fnu4HI	GCNGC	5 cut(s)	522, 557, 588, 1479, 2025
FokI	GGATG	2 cut(s)	298, 374
Fsp4HI	GCNGC	5 cut(s)	522, 557, 588, 1479, 2025
FspBI	CTAG	5 cut(s)	420, 567, 750, 1005, 1149
GlaI	GCGC	2 cut(s)	336, 1923
GluI	GCNGC	5 cut(s)	522, 557, 588, 1479, 2025
GsuI	CTGGAG	1 cut(s)	1386
HaeII	RGCGCY	1 cut(s)	338
HaeIII	GGCC	4 cut(s)	65, 524, 1646, 1828
HapII	CCGG	5 cut(s)	212, 1729, 1773, 1889, 2043
HgaI	GACGC	2 cut(s)	13, 1646
HhaI	GCGC	2 cut(s)	337, 1924
Hin1I	GRCGYC	2 cut(s)	24, 1638
Hin1II	CATG	7 cut(s)	547, 1110, 1330, 1444, 1687, 1833, 2070
Hin6I	GCGC	2 cut(s)	335, 1922
HinP1I	GCGC	2 cut(s)	335, 1922
HpaII	CCGG	5 cut(s)	212, 1729, 1773, 1889, 2043
HphI	GGTGA	5 cut(s)	98, 154, 1435, 1646, 1787
Hpy166II	GTNNAC	5 cut(s)	106, 417, 760, 1145, 1285
Hpy188III	TCNNGA	6 cut(s)	259, 544, 596, 645, 684, 1462
Hpy8I	GTNNAC	5 cut(s)	106, 417, 760, 1145, 1285
Hpy99I	CGWCG	3 cut(s)	142, 811, 1986
HpyAV	CCTTC	8 cut(s)	497, 544, 604, 1063, 1085, 1271, 1387, 1886
HpyCH4IV	ACGT	7 cut(s)	485, 1141, 1323, 1569, 1916, 1931, 2056
HpyCH4V	TGCA	9 cut(s)	183, 322, 489, 1139, 1184, 1206, 1481, 1701, 1781
HpyF10VI	GCNNNNNNNGC	6 cut(s)	587, 660, 1404, 1418, 1478, 1520
HpyF3I	CTNAG	5 cut(s)	458, 638, 954, 1609, 1944
HpySE526I	ACGT	7 cut(s)	485, 1141, 1323, 1569, 1916, 1931, 2056
Hsp92I	GRCGYC	2 cut(s)	24, 1638
Hsp92II	CATG	7 cut(s)	547, 1110, 1330, 1444, 1687, 1833, 2070
HspAI	GCGC	2 cut(s)	335, 1922
KpnI	GGTACC	1 cut(s)	1238
LmnI	GCTCC	2 cut(s)	1475, 2044
Lsp1109I	GCAGC	2 cut(s)	568, 1465
LweI	GCATC	6 cut(s)	301, 355, 568, 1710, 1768, 1790
MaeI	CTAG	5 cut(s)	420, 567, 750, 1005, 1149
MaeII	ACGT	7 cut(s)	485, 1141, 1323, 1569, 1916, 1931, 2056
MaeIII	GTNAC	7 cut(s)	25, 1111, 1303, 1550, 1595, 1634, 1705
MflI	RGATCY	6 cut(s)	214, 233, 442, 1024, 2010, 2070
MluCI	AATT	8 cut(s)	398, 602, 1037, 1055, 1586, 1664, 1851, 2047
MluI	ACGCGT	1 cut(s)	2081
MlyI	GAGTC	6 cut(s)	199, 549, 651, 755, 806, 911
MmeI	TCCRAC	4 cut(s)	789, 948, 1002, 1315
Mph1103I	ATGCAT	1 cut(s)	1783
MroXI	GAANNNNTTC	2 cut(s)	102, 614
MseI	TTAA	2 cut(s)	339, 1050
MslI	CAYNNNNRTG	1 cut(s)	1545
MspI	CCGG	5 cut(s)	212, 1729, 1773, 1889, 2043
MspR9I	CCNGG	3 cut(s)	1889, 2043, 2044
Mva1269I	GAATGC	1 cut(s)	1120
MvnI	CGCG	2 cut(s)	1126, 2083
MwoI	GCNNNNNNNGC	6 cut(s)	587, 660, 1404, 1418, 1478, 1520
NciI	CCSGG	3 cut(s)	1889, 2043, 2044
NcoI	CCATGG	3 cut(s)	1106, 1683, 1829
NdeI	CATATG	1 cut(s)	1542
NlaIII	CATG	7 cut(s)	547, 1110, 1330, 1444, 1687, 1833, 2070
NlaIV	GGNNCC	5 cut(s)	216, 1026, 1236, 1399, 2072
NmeAIII	GCCGAG	1 cut(s)	639
NmuCI	GTSAC	3 cut(s)	25, 1634, 1705
NsiI	ATGCAT	1 cut(s)	1783
NspV	TTCGAA	2 cut(s)	265, 382
PagI	TCATGA	1 cut(s)	543
PcsI	WCGNNNNNNNCGW	3 cut(s)	921, 1329, 1644
PctI	GAATGC	1 cut(s)	1120
PdmI	GAANNNNTTC	2 cut(s)	102, 614
PflFI	GACNNNGTC	1 cut(s)	1391
PflMI	CCANNNNNTGG	1 cut(s)	967
PinAI	ACCGGT	1 cut(s)	1772
PkrI	GCNGC	5 cut(s)	523, 558, 589, 1480, 2026
Ple19I	CGATCG	1 cut(s)	1620
PleI	GAGTC	6 cut(s)	198, 548, 651, 755, 806, 911
PpsI	GAGTC	6 cut(s)	198, 548, 651, 755, 806, 911
Ppu21I	YACGTR	2 cut(s)	1142, 2057
PsiI	TTATAA	1 cut(s)	1856
PspEI	GGTNACC	2 cut(s)	1303, 1550
PspN4I	GGNNCC	5 cut(s)	216, 1026, 1236, 1399, 2072
PspPI	GGNCC	1 cut(s)	1343
PstNI	CAGNNNCTG	1 cut(s)	1478
PsuI	RGATCY	6 cut(s)	214, 233, 442, 1024, 2010, 2070
PsyI	GACNNNGTC	1 cut(s)	1391
PvuI	CGATCG	1 cut(s)	1620
RsaI	GTAC	2 cut(s)	1236, 1949
RsaNI	GTAC	2 cut(s)	1235, 1948
RseI	CAYNNNNRTG	1 cut(s)	1545
SaqAI	TTAA	2 cut(s)	339, 1050
SatI	GCNGC	5 cut(s)	522, 557, 588, 1479, 2025
Sau96I	GGNCC	1 cut(s)	1343
SchI	GAGTC	6 cut(s)	199, 549, 651, 755, 806, 911
ScrFI	CCNGG	3 cut(s)	1889, 2043, 2044
SfaNI	GCATC	6 cut(s)	301, 355, 568, 1710, 1768, 1790
SfuI	TTCGAA	2 cut(s)	265, 382
SinI	GGWCC	1 cut(s)	1343
SmaI	CCCGGG	1 cut(s)	2044
SmiMI	CAYNNNNRTG	1 cut(s)	1545
Sse9I	AATT	8 cut(s)	398, 602, 1037, 1055, 1586, 1664, 1851, 2047
SspMI	CTAG	5 cut(s)	420, 567, 750, 1005, 1149
StyD4I	CCNGG	3 cut(s)	1887, 2041, 2042
StyI	CCWWGG	4 cut(s)	1106, 1641, 1683, 1829
TaiI	ACGT	7 cut(s)	488, 1144, 1326, 1572, 1919, 1934, 2059
TasI	AATT	8 cut(s)	398, 602, 1037, 1055, 1586, 1664, 1851, 2047
TauI	GCSGC	3 cut(s)	524, 590, 2027
Tru1I	TTAA	2 cut(s)	339, 1050
Tru9I	TTAA	2 cut(s)	339, 1050
TscAI	CASTG	5 cut(s)	762, 786, 1369, 1703, 1948
TseFI	GTSAC	3 cut(s)	25, 1634, 1705
TseI	GCWGC	2 cut(s)	556, 1478
Tsp45I	GTSAC	3 cut(s)	25, 1634, 1705
TspDTI	ATGAA	7 cut(s)	17, 741, 780, 1256, 1429, 1559, 1874
TspGWI	ACGGA	3 cut(s)	608, 1356, 1405
TspMI	CCCGGG	1 cut(s)	2042
TspRI	CASTG	5 cut(s)	762, 786, 1369, 1703, 1948
Tth111I	GACNNNGTC	1 cut(s)	1391
Van91I	CCANNNNNTGG	1 cut(s)	967
VpaK11BI	GGWCC	1 cut(s)	1343
XapI	RAATTY	3 cut(s)	398, 1664, 2047
XmaI	CCCGGG	1 cut(s)	2042
XmiI	GTMKAC	1 cut(s)	1144
XmnI	GAANNNNTTC	2 cut(s)	102, 614
XspI	CTAG	5 cut(s)	420, 567, 750, 1005, 1149
Zsp2I	ATGCAT	1 cut(s)	1783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.