Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0000809

Physical Location & Seq

Genomic Coordinates Reverse (-)

5850366 .. 5853241

Gene Structure 2876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG074700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGAAACAAATCTCCGTGGCAGCGAAGAACTCCACTCTCTTGCAACAGCTTGAGAAGGACCCTAGAGCTACCAAGGCCCTTGACACATGCAAAGAACTCTTGGGATTGGCTGTTACCGAGCTCAAGCAAGCTTTCGACAGATTGGGGAGTGACTTTGACATCACTGAAATTGGTACAATGATCATGGATTTGAAAGTCTGGATAAGCGCTACTGTCACATACCAAGAGACATGCTTGGACGCATTTGAGAATAGTACTAGTGATGCCGGTGAGAAGATGAAGATGATATTGAAGAGCTCCATGCATTTGAGCAGCAATTCCCTTGCCATGGTCTCCACAACCTCTTCATTCCTCAGTGGCTTAGACCATAAAGGCCTAAGCCGCCAGCTCCTTGCGGATGATGGCCTCCCTGTTCTTGGTCACGAGGATTTTGAACTTCCTGATGATTTTAATAATATTAATGATCTTAATAATACATGGTATTGGCCTGGATTCAGGAAACTCCTTACTGCTGCTAGTAGAGCTGATGTATACAAAGTTAATAAGGCCGCGAACATTATAGTGGCCAAGGATGGAAGTGGAAAGTACAAGACCATCAATGAGGCCCTACATCATGAAGGTGTCTACAATGAGCTTGTCCACATTACCAAGGCCATGACCAATCTGATGCTGATCGGAGACGGTGCTAATAAGACCAGAATCACCGGAAACTTGAACTTCGTAGACGGCACCCCTACCTACAAAACCGCTACAGTTGCGGTCCATGGAGCTCACTTCATGGCTAGGGATATTGGGTTTGAGAACTCAGCCGGTCCAGACAAACATCAAGCTGTGGCAATTAGGGTGAGTGCCGATGAGGCAATCTTCTATAGGTGTGCATTTGATGGCTACCAAGACACACTTTACACACATGTCCAACGCCAATTCTACCGCGACTGCACAATCTCCGGTACCATTGACTTTGTTTTCGGTGATGCTGCCGCCATTTTCCAAAACTGCACTTTTGTGGTGCGCAAGCCAATGCCGAACCAGTCTTGCATTGTCACAGCTCAAGGCCGGAAAGAGAGGCGCCAGCCAACTGGAATCATCATTATAAACAGCAGATTTACCTCTGATGCCGCATACTACCCTCTGAGGCATGAAAACAAGGCATATCTTGGCCGTCCATGGAAGGAGTACTCGAGGACCATCATCATGGAGTCATACATTGATGACTTCATTCGGCCACAAGGTTGGTTACCGTGGGAGGCCGATTTCGGGCTCAAGACATGCTTCTATGCTGAGTACAACAATCGTGGCCCTGGTGCTAGCAAGGCGAAGCGTGTGACATGGCACTGCATCAAGAACATTACGCCGCAGCATGCTTTGGATTTCACACCCGGCAGGTTCTTTAAGGGTGATCGATGGGTTAGGCTATCTGGAGTGCCTTATTTTCCTGGCCTCACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

483

Amino Acids

54.16

Weight (kDa)

8.01

Isoelectric Point (pI)

31.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	7 - 110	2.8e-18	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	185 - 467	8.2e-127	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05610 AT3G06830 AT4G15980 AT4G15980 AT5G27870 AT5G49180
fragaria_vesca	FvH4_4g18670 FvH4_4g18670 FvH4_4g18670 FvH4_4g18690 FvH4_4g18690
malus_domestica	MD04G1198100.v1.1 MD12G1210700.v1.1 MD13G1164500.v1.1 MD13G1164600.v1.1 MD13G1164700.v1.1 MD13G1164800.v1.1 MD16G1164200.v1.1 MD16G1164300.v1.1
prunus_persica	Prupe.1G123500_v2.0.a1 Prupe.1G123700_v2.0.a1 Prupe.1G123800_v2.0.a1 Prupe.1G131900_v2.0.a1 Prupe.1G132000_v2.0.a1 Prupe.1G132300_v2.0.a1 Prupe.6G318600_v2.0.a1
pyrus_communis	pycom13g14040
rosa_chinensis	RchiOBHm_Chr2g0115181 RchiOBHm_Chr3g0456331 RchiOBHm_Chr4g0423371 RchiOBHm_Chr4g0423391
rosa_laevigata	RLG00000007564 RLG00000007566 RLG00000018164 RLG00000025312
rosa_multiflora	Rmu_co8436939.1_g000001 Rmu_sc0002607.1_g000023 Rmu_sc0002784.1_g000024 Rmu_sc0005307.1_g000019 Rmu_sc0018054.1_g000005 Rmu_sc0031272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130660 Rroxscaffold_5G00365560 Rroxscaffold_5G00365590
rosa_rugosa	Rorug02G0194200 Rorug04G0186900 Rorug04G0187000 Rorug04G0187100 Rorug04G0187200
rosa_samantha	Rh2AG252700 Rh2BG262300 Rh2CG257300 Rh2DG260900 Rh3BG074700 Rh3CG074300 Rh3DG076200 Rh4AG246000 Rh4AG246100 Rh4BG251500 Rh4BG251600 Rh4CG259800 Rh4CG260100 Rh4DG246400 Rh4DG247000
rosa_wichuraiana	Rw2G019710 Rw3G006230 Rw4G021140 Rw4G021150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1094
Acc16I	TGCGCA	1 cut(s)	1013
Acc36I	ACCTGC	1 cut(s)	1374
Acc65I	GGTACC	1 cut(s)	950
AccB1I	GGYRCC	3 cut(s)	728, 950, 1068
AccI	GTMKAC	3 cut(s)	531, 624, 723
AccII	CGCG	2 cut(s)	551, 933
AciI	CCGC	9 cut(s)	382, 395, 549, 747, 758, 931, 981, 1119, 1355
AcoI	YGGCCR	3 cut(s)	564, 1159, 1223
AcyI	GRCGYC	1 cut(s)	1069
AfaI	GTAC	6 cut(s)	175, 256, 587, 952, 1178, 1286
AfeI	AGCGCT	1 cut(s)	208
AfiI	CCNNNNNNNGG	3 cut(s)	328, 416, 1257
AflIII	ACRYGT	1 cut(s)	910
AgsI	TTSAA	4 cut(s)	193, 292, 434, 715
AhlI	ACTAGT	1 cut(s)	257
AjnI	CCWGG	3 cut(s)	487, 1300, 1435
AleI	CACNNNNGTG	1 cut(s)	1004
Alw21I	GWGCWC	3 cut(s)	123, 299, 772
Alw26I	GTCTC	3 cut(s)	221, 337, 672
Ama87I	CYCGRG	1 cut(s)	1180
Aor51HI	AGCGCT	1 cut(s)	208
ApeKI	GCWGC	5 cut(s)	20, 312, 512, 977, 1357
ArsI	GACNNNNNNTTYG	2 cut(s)	950, 982
AseI	ATTAAT	1 cut(s)	459
Asp718I	GGTACC	1 cut(s)	950
AspLEI	GCGC	3 cut(s)	209, 1014, 1071
AspS9I	GGNCC	7 cut(s)	58, 76, 604, 760, 812, 1185, 1298
AsuC2I	CCSGG	1 cut(s)	1380
AsuHPI	GGTGA	5 cut(s)	281, 694, 856, 983, 1409
AsuNHI	GCTAGC	1 cut(s)	1307
AvaI	CYCGRG	1 cut(s)	1180
AvaII	GGWCC	4 cut(s)	58, 760, 812, 1185
BalI	TGGCCA	1 cut(s)	566
BanI	GGYRCC	3 cut(s)	728, 950, 1068
BanII	GRGCYC	4 cut(s)	123, 299, 772, 1263
BauI	CACGAG	1 cut(s)	422
Bbv12I	GWGCWC	3 cut(s)	123, 299, 772
BbvI	GCAGC	5 cut(s)	32, 324, 499, 964, 1369
BccI	CCATC	6 cut(s)	395, 566, 602, 878, 1196, 1398
BceAI	ACGGC	2 cut(s)	742, 1146
BciT130I	CCWGG	3 cut(s)	489, 1302, 1437
BclI	TGATCA	1 cut(s)	180
BcnI	CCSGG	1 cut(s)	1380
BcoDI	GTCTC	3 cut(s)	221, 337, 672
BcuI	ACTAGT	1 cut(s)	257
BfaI	CTAG	5 cut(s)	63, 258, 516, 783, 1308
BfmI	CTRYAG	2 cut(s)	750, 868
BfoI	RGCGCY	2 cut(s)	210, 1072
BfuAI	ACCTGC	1 cut(s)	1374
BglI	GCCNNNNNGGC	1 cut(s)	857
BmcAI	AGTACT	2 cut(s)	256, 1178
Bme1390I	CCNGG	4 cut(s)	489, 1302, 1380, 1437
Bme18I	GGWCC	4 cut(s)	58, 760, 812, 1185
BmeT110I	CYCGRG	1 cut(s)	1180
BmgT120I	GGNCC	7 cut(s)	58, 76, 604, 760, 812, 1185, 1298
BmiI	GGNNCC	4 cut(s)	60, 730, 952, 1070
BmrFI	CCNGG	4 cut(s)	489, 1302, 1380, 1437
BmsI	GCATC	5 cut(s)	253, 657, 964, 1105, 1347
BmtI	GCTAGC	1 cut(s)	1311
BpmI	CTGGAG	1 cut(s)	1440
Bpu10I	CCTNAGC	1 cut(s)	377
BpuEI	CTTGAG	4 cut(s)	71, 107, 1035, 1247
BpuMI	CCSGG	1 cut(s)	1380
Bsa29I	ATCGAT	1 cut(s)	1402
BsaBI	GATNNNNATC	1 cut(s)	671
BsaHI	GRCGYC	1 cut(s)	1069
BsaI	GGTCTC	1 cut(s)	337
BsaJI	CCNNGG	9 cut(s)	15, 72, 327, 567, 648, 763, 1166, 1241, 1300
BsaWI	WCCGGW	2 cut(s)	704, 947
Bsc4I	CCNNNNNNNGG	3 cut(s)	328, 416, 1257
Bse118I	RCCGGY	2 cut(s)	266, 809
Bse1I	ACTGG	2 cut(s)	1030, 1084
Bse8I	GATNNNNATC	1 cut(s)	671
BseBI	CCWGG	3 cut(s)	489, 1302, 1437
BseCI	ATCGAT	1 cut(s)	1402
BseDI	CCNNGG	9 cut(s)	15, 72, 327, 567, 648, 763, 1166, 1241, 1300
BseGI	GGATG	2 cut(s)	403, 577
BseJI	GATNNNNATC	1 cut(s)	671
BseLI	CCNNNNNNNGG	3 cut(s)	328, 416, 1257
BseMII	CTCAG	4 cut(s)	367, 819, 1124, 1272
BseNI	ACTGG	2 cut(s)	1030, 1084
BseXI	GCAGC	5 cut(s)	32, 324, 499, 964, 1369
BsgI	GTGCAG	2 cut(s)	922, 982
Bsh1236I	CGCG	2 cut(s)	551, 933
BshNI	GGYRCC	3 cut(s)	728, 950, 1068
BshVI	ATCGAT	1 cut(s)	1402
BsiHKAI	GWGCWC	3 cut(s)	123, 299, 772
BsiHKCI	CYCGRG	1 cut(s)	1180
BsiSI	CCGG	6 cut(s)	267, 705, 810, 948, 1057, 1380
BslI	CCNNNNNNNGG	3 cut(s)	328, 416, 1257
BsmAI	GTCTC	3 cut(s)	221, 337, 672
BsmBI	CGTCTC	1 cut(s)	672
Bso31I	GGTCTC	1 cut(s)	337
BsoBI	CYCGRG	1 cut(s)	1180
Bsp1286I	GDGCHC	4 cut(s)	123, 299, 772, 1263
Bsp143I	GATC	4 cut(s)	180, 463, 672, 1399
Bsp19I	CCATGG	3 cut(s)	327, 763, 1166
BspACI	CCGC	9 cut(s)	382, 395, 549, 747, 758, 931, 981, 1119, 1355
BspCNI	CTCAG	4 cut(s)	366, 818, 1125, 1273
BspDI	ATCGAT	1 cut(s)	1402
BspFNI	CGCG	2 cut(s)	551, 933
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	4 cut(s)	60, 730, 952, 1070
BspMI	ACCTGC	1 cut(s)	1374
BspOI	GCTAGC	1 cut(s)	1311
BspQI	GCTCTTC	1 cut(s)	287
BspT107I	GGYRCC	3 cut(s)	728, 950, 1068
BspTNI	GGTCTC	1 cut(s)	337
BsrFI	RCCGGY	2 cut(s)	266, 809
BsrI	ACTGG	2 cut(s)	1030, 1084
BssAI	RCCGGY	2 cut(s)	266, 809
BssECI	CCNNGG	9 cut(s)	15, 72, 327, 567, 648, 763, 1166, 1241, 1300
BssMI	GATC	4 cut(s)	180, 463, 672, 1399
BssNAI	GTATAC	1 cut(s)	532
BssNI	GRCGYC	1 cut(s)	1069
BssSI	CACGAG	1 cut(s)	422
BssT1I	CCWWGG	6 cut(s)	72, 327, 567, 648, 763, 1166
Bst1107I	GTATAC	1 cut(s)	532
Bst2BI	CACGAG	1 cut(s)	422
Bst2UI	CCWGG	3 cut(s)	489, 1302, 1437
Bst4CI	ACNGT	4 cut(s)	214, 683, 754, 1242
Bst6I	CTCTTC	2 cut(s)	287, 349
BstACI	GRCGYC	1 cut(s)	1069
BstC8I	GCNNGC	6 cut(s)	129, 386, 1016, 1073, 1309, 1362
BstDEI	CTNAG	6 cut(s)	353, 361, 377, 805, 1133, 1281
BstDSI	CCRYGG	5 cut(s)	15, 327, 763, 1166, 1241
BstEII	GGTNACC	1 cut(s)	1236
BstF5I	GGATG	2 cut(s)	403, 577
BstFNI	CGCG	2 cut(s)	551, 933
BstH2I	RGCGCY	2 cut(s)	210, 1072
BstHHI	GCGC	3 cut(s)	209, 1014, 1071
BstKTI	GATC	4 cut(s)	183, 466, 675, 1402
BstMAI	GTCTC	3 cut(s)	221, 337, 672
BstMBI	GATC	4 cut(s)	180, 463, 672, 1399
BstMWI	GCNNNNNNNGC	6 cut(s)	74, 381, 521, 755, 857, 1313
BstNI	CCWGG	3 cut(s)	489, 1302, 1437
BstNSI	RCATGY	5 cut(s)	90, 234, 914, 1272, 1364
BstPI	GGTNACC	1 cut(s)	1236
BstSCI	CCNGG	4 cut(s)	487, 1300, 1378, 1435
BstSFI	CTRYAG	2 cut(s)	750, 868
BstUI	CGCG	2 cut(s)	551, 933
BstV1I	GCAGC	5 cut(s)	32, 324, 499, 964, 1369
BstXI	CCANNNNNNTGG	3 cut(s)	1079, 1195, 1233
BstZ17I	GTATAC	1 cut(s)	532
Bsu15I	ATCGAT	1 cut(s)	1402
BsuTUI	ATCGAT	1 cut(s)	1402
BtgI	CCRYGG	5 cut(s)	15, 327, 763, 1166, 1241
BtsCI	GGATG	2 cut(s)	403, 577
BtsI	GCAGTG	2 cut(s)	1333, 1443
BtsIMutI	CAGTG	4 cut(s)	162, 361, 1333, 1443
BveI	ACCTGC	1 cut(s)	1374
Cac8I	GCNNGC	6 cut(s)	129, 386, 1016, 1073, 1309, 1362
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	3 cut(s)	209, 1014, 1071
Cfr10I	RCCGGY	2 cut(s)	266, 809
Cfr13I	GGNCC	7 cut(s)	58, 76, 604, 760, 812, 1185, 1298
ClaI	ATCGAT	1 cut(s)	1402
CseI	GACGC	1 cut(s)	248
Csp6I	GTAC	6 cut(s)	174, 255, 586, 951, 1177, 1285
CspCI	CAANNNNNGTGG	2 cut(s)	1276, 1311
CviQI	GTAC	6 cut(s)	174, 255, 586, 951, 1177, 1285
DdeI	CTNAG	6 cut(s)	353, 361, 377, 805, 1133, 1281
DinI	GGCGCC	1 cut(s)	1070
DpnI	GATC	4 cut(s)	182, 465, 674, 1401
DpnII	GATC	4 cut(s)	180, 463, 672, 1399
EaeI	YGGCCR	3 cut(s)	564, 1159, 1223
Eam1104I	CTCTTC	2 cut(s)	287, 349
EarI	CTCTTC	2 cut(s)	287, 349
Ecl136II	GAGCTC	3 cut(s)	121, 297, 770
Eco130I	CCWWGG	6 cut(s)	72, 327, 567, 648, 763, 1166
Eco147I	AGGCCT	1 cut(s)	375
Eco24I	GRGCYC	4 cut(s)	123, 299, 772, 1263
Eco31I	GGTCTC	1 cut(s)	337
Eco47I	GGWCC	4 cut(s)	58, 760, 812, 1185
Eco47III	AGCGCT	1 cut(s)	208
Eco53kI	GAGCTC	3 cut(s)	121, 297, 770
Eco88I	CYCGRG	1 cut(s)	1180
Eco91I	GGTNACC	1 cut(s)	1236
EcoICRI	GAGCTC	3 cut(s)	121, 297, 770
EcoO109I	RGGNCCY	3 cut(s)	58, 76, 604
EcoO65I	GGTNACC	1 cut(s)	1236
EcoRII	CCWGG	3 cut(s)	487, 1300, 1435
EcoT14I	CCWWGG	6 cut(s)	72, 327, 567, 648, 763, 1166
EcoT22I	ATGCAT	1 cut(s)	306
EcoT38I	GRGCYC	4 cut(s)	123, 299, 772, 1263
EgeI	GGCGCC	1 cut(s)	1070
EheI	GGCGCC	1 cut(s)	1070
ErhI	CCWWGG	6 cut(s)	72, 327, 567, 648, 763, 1166
Esp3I	CGTCTC	1 cut(s)	672
FalI	AAGNNNNNCTT	4 cut(s)	885, 917, 1256, 1288
FbaI	TGATCA	1 cut(s)	180
FblI	GTMKAC	3 cut(s)	531, 624, 723
FokI	GGATG	2 cut(s)	410, 584
FriOI	GRGCYC	4 cut(s)	123, 299, 772, 1263
FspBI	CTAG	5 cut(s)	63, 258, 516, 783, 1308
FspI	TGCGCA	1 cut(s)	1013
GlaI	GCGC	3 cut(s)	208, 1013, 1070
GsuI	CTGGAG	1 cut(s)	1440
HaeII	RGCGCY	2 cut(s)	210, 1072
HapII	CCGG	6 cut(s)	267, 705, 810, 948, 1057, 1380
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	3 cut(s)	209, 1014, 1071
Hin1I	GRCGYC	1 cut(s)	1069
Hin6I	GCGC	3 cut(s)	207, 1012, 1069
HinP1I	GCGC	3 cut(s)	207, 1012, 1069
HindIII	AAGCTT	1 cut(s)	129
HinfI	GANTC	4 cut(s)	492, 699, 1083, 1199
HpaII	CCGG	6 cut(s)	267, 705, 810, 948, 1057, 1380
HphI	GGTGA	5 cut(s)	281, 694, 856, 983, 1409
Hpy166II	GTNNAC	4 cut(s)	532, 625, 640, 724
Hpy188I	TCNGA	4 cut(s)	666, 677, 1114, 1134
Hpy188III	TCNNGA	9 cut(s)	199, 422, 440, 496, 614, 815, 1264, 1342, 1419
Hpy8I	GTNNAC	4 cut(s)	532, 625, 640, 724
HpyAV	CCTTC	3 cut(s)	49, 611, 1165
HpyCH4III	ACNGT	4 cut(s)	214, 683, 754, 1242
HpyCH4V	TGCA	8 cut(s)	43, 90, 304, 878, 939, 999, 1038, 1338
HpyF10VI	GCNNNNNNNGC	6 cut(s)	74, 381, 521, 755, 857, 1313
HpyF3I	CTNAG	6 cut(s)	353, 361, 377, 805, 1133, 1281
Hsp92I	GRCGYC	1 cut(s)	1069
HspAI	GCGC	3 cut(s)	207, 1012, 1069
KasI	GGCGCC	1 cut(s)	1068
KpnI	GGTACC	1 cut(s)	954
Ksp22I	TGATCA	1 cut(s)	180
Kzo9I	GATC	4 cut(s)	180, 463, 672, 1399
LguI	GCTCTTC	1 cut(s)	287
LmnI	GCTCC	3 cut(s)	302, 393, 767
Lsp1109I	GCAGC	5 cut(s)	32, 324, 499, 964, 1369
LweI	GCATC	5 cut(s)	253, 657, 964, 1105, 1347
MaeI	CTAG	5 cut(s)	63, 258, 516, 783, 1308
MaeIII	GTNAC	7 cut(s)	112, 149, 214, 419, 1042, 1236, 1324
MalI	GATC	4 cut(s)	182, 465, 674, 1401
MboI	GATC	4 cut(s)	180, 463, 672, 1399
MboII	GAAGA	6 cut(s)	37, 286, 292, 304, 336, 856
MhlI	GDGCHC	4 cut(s)	123, 299, 772, 1263
MlsI	TGGCCA	1 cut(s)	566
MluCI	AATT	4 cut(s)	168, 316, 837, 923
MluNI	TGGCCA	1 cut(s)	566
Mly113I	GGCGCC	1 cut(s)	1069
MlyI	GAGTC	1 cut(s)	1208
MmeI	TCCRAC	1 cut(s)	940
Mox20I	TGGCCA	1 cut(s)	566
Mph1103I	ATGCAT	1 cut(s)	306
MscI	TGGCCA	1 cut(s)	566
MseI	TTAA	5 cut(s)	450, 459, 468, 540, 1392
MslI	CAYNNNNRTG	4 cut(s)	560, 618, 1004, 1193
Msp20I	TGGCCA	1 cut(s)	566
MspI	CCGG	6 cut(s)	267, 705, 810, 948, 1057, 1380
MspR9I	CCNGG	4 cut(s)	489, 1302, 1380, 1437
MvaI	CCWGG	3 cut(s)	489, 1302, 1437
MvnI	CGCG	2 cut(s)	551, 933
MwoI	GCNNNNNNNGC	6 cut(s)	74, 381, 521, 755, 857, 1313
NarI	GGCGCC	1 cut(s)	1069
NciI	CCSGG	1 cut(s)	1380
NcoI	CCATGG	3 cut(s)	327, 763, 1166
NdeII	GATC	4 cut(s)	180, 463, 672, 1399
NheI	GCTAGC	1 cut(s)	1307
NlaIV	GGNNCC	4 cut(s)	60, 730, 952, 1070
NmuCI	GTSAC	5 cut(s)	149, 214, 419, 1042, 1324
NsbI	TGCGCA	1 cut(s)	1013
NsiI	ATGCAT	1 cut(s)	306
NspI	RCATGY	5 cut(s)	90, 234, 914, 1272, 1364
OliI	CACNNNNGTG	1 cut(s)	1004
PaeI	GCATGC	1 cut(s)	1364
PaeR7I	CTCGAG	1 cut(s)	1180
PagI	TCATGA	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	375
PciI	ACATGT	1 cut(s)	910
PciSI	GCTCTTC	1 cut(s)	287
PfeI	GAWTC	3 cut(s)	492, 699, 1083
PleI	GAGTC	1 cut(s)	1207
PluTI	GGCGCC	1 cut(s)	1072
PpsI	GAGTC	1 cut(s)	1207
PpuMI	RGGWCCY	1 cut(s)	58
PscI	ACATGT	1 cut(s)	910
PshBI	ATTAAT	1 cut(s)	459
PsiI	TTATAA	1 cut(s)	1094
Psp124BI	GAGCTC	3 cut(s)	123, 299, 772
Psp5II	RGGWCCY	1 cut(s)	58
Psp6I	CCWGG	3 cut(s)	487, 1300, 1435
PspEI	GGTNACC	1 cut(s)	1236
PspGI	CCWGG	3 cut(s)	487, 1300, 1435
PspN4I	GGNNCC	4 cut(s)	60, 730, 952, 1070
PspPI	GGNCC	7 cut(s)	58, 76, 604, 760, 812, 1185, 1298
PspPPI	RGGWCCY	1 cut(s)	58
PspXI	VCTCGAGB	1 cut(s)	1180
RsaI	GTAC	6 cut(s)	175, 256, 587, 952, 1178, 1286
RsaNI	GTAC	6 cut(s)	174, 255, 586, 951, 1177, 1285
RseI	CAYNNNNRTG	4 cut(s)	560, 618, 1004, 1193
SacI	GAGCTC	3 cut(s)	123, 299, 772
SapI	GCTCTTC	1 cut(s)	287
SaqAI	TTAA	5 cut(s)	450, 459, 468, 540, 1392
Sau3AI	GATC	4 cut(s)	180, 463, 672, 1399
Sau96I	GGNCC	7 cut(s)	58, 76, 604, 760, 812, 1185, 1298
ScaI	AGTACT	2 cut(s)	256, 1178
SchI	GAGTC	1 cut(s)	1208
ScrFI	CCNGG	4 cut(s)	489, 1302, 1380, 1437
SduI	GDGCHC	4 cut(s)	123, 299, 772, 1263
SfaNI	GCATC	5 cut(s)	253, 657, 964, 1105, 1347
SfcI	CTRYAG	2 cut(s)	750, 868
SfoI	GGCGCC	1 cut(s)	1070
Sfr274I	CTCGAG	1 cut(s)	1180
SinI	GGWCC	4 cut(s)	58, 760, 812, 1185
SlaI	CTCGAG	1 cut(s)	1180
SmiMI	CAYNNNNRTG	4 cut(s)	560, 618, 1004, 1193
SmlI	CTYRAG	5 cut(s)	50, 122, 1050, 1180, 1262
SmoI	CTYRAG	5 cut(s)	50, 122, 1050, 1180, 1262
SpeI	ACTAGT	1 cut(s)	257
SphI	GCATGC	1 cut(s)	1364
Sse9I	AATT	4 cut(s)	168, 316, 837, 923
SseBI	AGGCCT	1 cut(s)	375
SsiI	CCGC	9 cut(s)	382, 395, 549, 747, 758, 931, 981, 1119, 1355
SspDI	GGCGCC	1 cut(s)	1068
SspI	AATATT	1 cut(s)	457
SspMI	CTAG	5 cut(s)	63, 258, 516, 783, 1308
SstI	GAGCTC	3 cut(s)	123, 299, 772
StuI	AGGCCT	1 cut(s)	375
StyD4I	CCNGG	4 cut(s)	487, 1300, 1378, 1435
StyI	CCWWGG	6 cut(s)	72, 327, 567, 648, 763, 1166
TaaI	ACNGT	4 cut(s)	214, 683, 754, 1242
TaqI	TCGA	3 cut(s)	135, 1181, 1402
TasI	AATT	4 cut(s)	168, 316, 837, 923
TatI	WGTACW	4 cut(s)	254, 585, 1176, 1284
TauI	GCSGC	5 cut(s)	384, 551, 983, 1121, 1357
TfiI	GAWTC	3 cut(s)	492, 699, 1083
Tru1I	TTAA	5 cut(s)	450, 459, 468, 540, 1392
Tru9I	TTAA	5 cut(s)	450, 459, 468, 540, 1392
TscAI	CASTG	4 cut(s)	169, 361, 1340, 1450
TseFI	GTSAC	5 cut(s)	149, 214, 419, 1042, 1324
TseI	GCWGC	5 cut(s)	20, 312, 512, 977, 1357
Tsp45I	GTSAC	5 cut(s)	149, 214, 419, 1042, 1324
TspDTI	ATGAA	7 cut(s)	17, 293, 336, 630, 766, 1155, 1207
TspGWI	ACGGA	1 cut(s)	4
TspRI	CASTG	4 cut(s)	169, 361, 1340, 1450
VpaK11BI	GGWCC	4 cut(s)	58, 760, 812, 1185
VspI	ATTAAT	1 cut(s)	459
XceI	RCATGY	5 cut(s)	90, 234, 914, 1272, 1364
XhoI	CTCGAG	1 cut(s)	1180
XmiI	GTMKAC	3 cut(s)	531, 624, 723
XspI	CTAG	5 cut(s)	63, 258, 516, 783, 1308
ZrmI	AGTACT	2 cut(s)	256, 1178
Zsp2I	ATGCAT	1 cut(s)	306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.