Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000809

Physical Location & Seq

Genomic Coordinates Reverse (-)

26278853 .. 26280649

Gene Structure 1797 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018164

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGAGTGGAAATGACCGTCACGGCCAGAAGAAGAAGTTCGCCATCATCGGCTTGTTGGCATTGATCCTGCTAGCCATGGTGGTTGCTGTGGTTGTTGGGGTCACCAGAAGCCAAAAAGGCGAAAATGACGAGAAGATACCAGCCACAACATCTAAGGCAATTGAAGCCGTCTGCCAACCAACAGACTACAAGGAAACCTGTCAGAATAGCCTCTCTGCAAAAGCCGGCAACATTACTGACCCAAAAGAGCTCATCAAGCTTGGGTTCCAGATCACAATGGACAAAATCCAAGAGGTGATCAACAATTCCTCCACCTTGAAAGATCTTGCCAAGGATCCGATGGCCAACCAGGCCCTTGAGAACTGTAAAGAGCTCTTAACGTACTCCATCGACGATTTGAAGAAGTCGTTCGAGAAGATCGGCCCTTTTGAAGTCAGGAAGCTCAAAGAGTATGTCGAAGACCTCAAGATCTGGCTCAGTGCCTCCATCAGCTACGAACAGACTTGCTTGGATGGGTTCCAGAACACCACCGGTGACACTGGGACCAAAATGCAGGACTTTTTGAAGCAATCACAAGAACTCACCAAGAACGGACTTGCCATGGTCACTGAAATTAGCAACCTCTTCGGAAACAGCAACCTTAAAACCCAACGTCGTCTCTTGGCTGAGCCTCCTATTGACCCAAAAAAGGCGCCAAAGATCATCCCCTCATGGATTGATGGACGCAAGCTCGACCTTACCACTGCCAATCCCGGCTCCATTAAACCTGATGTCGTAGTCGCCATGGACAGAAGCGGAAAGTACAAGACCATCAACGATGCTCTCAAGGATATTCCCAAGGACAACGGTCAGAAGACGTTTGTGATCTACATCAAGGAGGGTGTGTACAACGAGAATGTGTTGCTTGACAAGCACATGACCAATGTCATGTTCATCGGTGATGGCCCTACTAAGACTAAGATCACGGGTAACAAGAACTATGCCAATGGTATCCAAACATTCAAAACCGCCACTGTCGCTGTGATCGGAGACTACTTCATTGCTAAGGACATAGGATTTGAGAATACAGCCGGACCCAAAGGACACCAAGCTGTGGCATTGCGTGTTCAATCTGACCTGTCCATCTTCTACAACTGCCGGATAGACGGGTACCAAGACACTCTCTACACCCAAACCCACAGACAGTTCTACCGCGACTGCACCATCACTGGAACCATCGACTTCATCTTTGGCGACGCAGCCGTCGTGTTCCAGAACTGCAAGTTGATCATCAGGAAGCCCGACCCAAATCAAGACATCATGGTCACCGCCCAAGGAAGGAGCGACAAGCGCCAGCCTACAGCCATTGTCCTCCAAAACTGCACCATCAGCGGCGAGAAAGATTACATTGAAGACAAGAACACCAAAATGGCCTACTTGGGCAGGCCATGGAACACCTACTCCAGGGCCATCGTGATGCAGTCCCAGATCGATGATGTGATCAACCCCCTGGGTTGGATGGAGTGGACGGGTAAGATCAATCACCAAACATGCTGGTTCGGTGAGTACTCAAACAGGGGACCTGGTGCGGCCACCAACAAGAGGGTGAATTGGTACAAGTTGGCCACCCCTGAACAAGCCAGTGAATTCGCCCCTGGCAGAATTCTTTTTGGTGATAGGTGGATCAAGCCCAGCGGTGTCCCTTATGAGGCTGGAATGATGCGTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

570

Amino Acids

63.61

Weight (kDa)

8.75

Isoelectric Point (pI)

25.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	53 - 201	1.3e-31	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	257 - 551	6.2e-131	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05610 AT3G06830 AT4G15980 AT4G15980 AT5G27870 AT5G49180
fragaria_vesca	FvH4_4g18670 FvH4_4g18670 FvH4_4g18670 FvH4_4g18690 FvH4_4g18690
malus_domestica	MD04G1198100.v1.1 MD12G1210700.v1.1 MD13G1164500.v1.1 MD13G1164600.v1.1 MD13G1164700.v1.1 MD13G1164800.v1.1 MD16G1164200.v1.1 MD16G1164300.v1.1
prunus_persica	Prupe.1G123500_v2.0.a1 Prupe.1G123700_v2.0.a1 Prupe.1G123800_v2.0.a1 Prupe.1G131900_v2.0.a1 Prupe.1G132000_v2.0.a1 Prupe.1G132300_v2.0.a1 Prupe.6G318600_v2.0.a1
pyrus_communis	pycom13g14040
rosa_chinensis	RchiOBHm_Chr2g0115181 RchiOBHm_Chr3g0456331 RchiOBHm_Chr4g0423371 RchiOBHm_Chr4g0423391
rosa_laevigata	RLG00000007564 RLG00000007566 RLG00000018164 RLG00000025312
rosa_multiflora	Rmu_co8436939.1_g000001 Rmu_sc0002607.1_g000023 Rmu_sc0002784.1_g000024 Rmu_sc0005307.1_g000019 Rmu_sc0018054.1_g000005 Rmu_sc0031272.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130660 Rroxscaffold_5G00365560 Rroxscaffold_5G00365590
rosa_rugosa	Rorug02G0194200 Rorug04G0186900 Rorug04G0187000 Rorug04G0187100 Rorug04G0187200
rosa_samantha	Rh2AG252700 Rh2BG262300 Rh2CG257300 Rh2DG260900 Rh3BG074700 Rh3CG074300 Rh3DG076200 Rh4AG246000 Rh4AG246100 Rh4BG251500 Rh4BG251600 Rh4CG259800 Rh4CG260100 Rh4DG246400 Rh4DG247000
rosa_wichuraiana	Rw2G019710 Rw3G006230 Rw4G021140 Rw4G021150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1241, 1301
Acc65I	GGTACC	1 cut(s)	1149
AccB1I	GGYRCC	2 cut(s)	691, 1149
AccB7I	CCANNNNNTGG	1 cut(s)	1093
AccII	CGCG	1 cut(s)	1194
AciI	CCGC	7 cut(s)	795, 1008, 1192, 1308, 1371, 1568, 1674
AclWI	GGATC	4 cut(s)	58, 329, 342, 1670
AcoI	YGGCCR	4 cut(s)	22, 342, 1569, 1602
AcsI	RAATTY	2 cut(s)	1625, 1641
AcyI	GRCGYC	1 cut(s)	692
AfaI	GTAC	6 cut(s)	383, 803, 887, 1151, 1547, 1595
AfiI	CCNNNNNNNGG	7 cut(s)	688, 1093, 1317, 1443, 1494, 1581, 1687
AgeI	ACCGGT	1 cut(s)	530
AgsI	TTSAA	8 cut(s)	164, 319, 400, 431, 565, 1003, 1109, 1391
AjnI	CCWGG	5 cut(s)	348, 1442, 1488, 1561, 1633
AjuI	GAANNNNNNNTTGG	2 cut(s)	914, 946
AloI	GAACNNNNNNTCC	2 cut(s)	1424, 1456
AluBI	AGCT	7 cut(s)	250, 259, 373, 442, 492, 730, 1091
AluI	AGCT	7 cut(s)	250, 259, 373, 442, 492, 730, 1091
Alw21I	GWGCWC	2 cut(s)	252, 375
Alw26I	GTCTC	2 cut(s)	662, 1023
AlwI	GGATC	4 cut(s)	58, 329, 342, 1670
ApeKI	GCWGC	1 cut(s)	1238
ApoI	RAATTY	2 cut(s)	1625, 1641
ArsI	GACNNNNNNTTYG	6 cut(s)	438, 470, 1040, 1072, 1211, 1243
AsiGI	ACCGGT	1 cut(s)	530
Asp700I	GAANNNNTTC	2 cut(s)	35, 407
Asp718I	GGTACC	1 cut(s)	1149
AspLEI	GCGC	2 cut(s)	694, 1332
AspS9I	GGNCC	7 cut(s)	352, 422, 543, 944, 1073, 1446, 1559
AsuC2I	CCSGG	1 cut(s)	753
AsuNHI	GCTAGC	1 cut(s)	70
AvaII	GGWCC	3 cut(s)	543, 1073, 1559
BalI	TGGCCA	2 cut(s)	344, 1604
BamHI	GGATCC	1 cut(s)	334
BanI	GGYRCC	2 cut(s)	691, 1149
BanII	GRGCYC	2 cut(s)	252, 375
BbsI	GAAGAC	3 cut(s)	465, 860, 1398
Bbv12I	GWGCWC	2 cut(s)	252, 375
BbvI	GCAGC	1 cut(s)	1250
BceAI	ACGGC	3 cut(s)	37, 152, 1226
BcgI	CGANNNNNNTGC	2 cut(s)	607, 641
BciT130I	CCWGG	5 cut(s)	350, 1444, 1490, 1563, 1635
BciVI	GTATCC	1 cut(s)	1001
BclI	TGATCA	3 cut(s)	297, 1266, 1479
BcnI	CCSGG	1 cut(s)	753
BcoDI	GTCTC	2 cut(s)	662, 1023
BfaI	CTAG	1 cut(s)	71
BfmI	CTRYAG	1 cut(s)	1338
BfoI	RGCGCY	2 cut(s)	695, 1333
BfuI	GTATCC	1 cut(s)	1001
BglI	GCCNNNNNGGC	2 cut(s)	117, 350
BglII	AGATCT	2 cut(s)	322, 468
BisI	GCNGC	3 cut(s)	1239, 1372, 1569
BlpI	GCTNAGC	1 cut(s)	666
BlsI	GCNGC	3 cut(s)	1240, 1373, 1570
BmcAI	AGTACT	1 cut(s)	1547
Bme1390I	CCNGG	6 cut(s)	350, 753, 1444, 1490, 1563, 1635
Bme18I	GGWCC	3 cut(s)	543, 1073, 1559
BmgT120I	GGNCC	7 cut(s)	352, 422, 543, 944, 1073, 1446, 1559
BmrFI	CCNGG	6 cut(s)	350, 753, 1444, 1490, 1563, 1635
BmrI	ACTGGG	1 cut(s)	549
BmsI	GCATC	3 cut(s)	808, 1446, 1689
BmtI	GCTAGC	1 cut(s)	74
BmuI	ACTGGG	1 cut(s)	549
BoxI	GACNNNNGTC	2 cut(s)	846, 923
BpiI	GAAGAC	3 cut(s)	465, 860, 1398
BpmI	CTGGAG	1 cut(s)	1426
Bpu10I	CCTNAGC	1 cut(s)	1044
Bpu1102I	GCTNAGC	1 cut(s)	666
BpuEI	CTTGAG	3 cut(s)	377, 449, 809
BpuMI	CCSGG	1 cut(s)	753
Bsa29I	ATCGAT	1 cut(s)	1470
BsaBI	GATNNNNATC	2 cut(s)	869, 1703
BsaHI	GRCGYC	1 cut(s)	692
BsaWI	WCCGGW	1 cut(s)	530
BsaXI	ACNNNNNCTCC	6 cut(s)	293, 323, 869, 899, 1424, 1454
Bsc4I	CCNNNNNNNGG	7 cut(s)	688, 1093, 1317, 1443, 1494, 1581, 1687
Bse118I	RCCGGY	2 cut(s)	224, 530
Bse1I	ACTGG	3 cut(s)	544, 1213, 1620
Bse3DI	GCAATG	2 cut(s)	1038, 1097
Bse8I	GATNNNNATC	2 cut(s)	869, 1703
BseBI	CCWGG	5 cut(s)	350, 1444, 1490, 1563, 1635
BseCI	ATCGAT	1 cut(s)	1470
BseGI	GGATG	3 cut(s)	517, 702, 1503
BseJI	GATNNNNATC	2 cut(s)	869, 1703
BseLI	CCNNNNNNNGG	7 cut(s)	688, 1093, 1317, 1443, 1494, 1581, 1687
BseMI	GCAATG	2 cut(s)	1038, 1097
BseMII	CTCAG	2 cut(s)	490, 657
BseNI	ACTGG	3 cut(s)	544, 1213, 1620
BseXI	GCAGC	1 cut(s)	1250
BseYI	CCCAGC	1 cut(s)	1670
BsgI	GTGCAG	2 cut(s)	1183, 1345
Bsh1236I	CGCG	1 cut(s)	1194
BshNI	GGYRCC	2 cut(s)	691, 1149
BshTI	ACCGGT	1 cut(s)	530
BshVI	ATCGAT	1 cut(s)	1470
BsiHKAI	GWGCWC	2 cut(s)	252, 375
BsiSI	CCGG	5 cut(s)	225, 531, 753, 1071, 1138
BslFI	GGGAC	4 cut(s)	556, 1447, 1572, 1664
BslI	CCNNNNNNNGG	7 cut(s)	688, 1093, 1317, 1443, 1494, 1581, 1687
BsmAI	GTCTC	2 cut(s)	662, 1023
BsmBI	CGTCTC	1 cut(s)	662
BsmFI	GGGAC	4 cut(s)	556, 1447, 1572, 1664
Bsp1286I	GDGCHC	2 cut(s)	252, 375
Bsp1407I	TGTACA	1 cut(s)	885
Bsp1720I	GCTNAGC	1 cut(s)	666
Bsp19I	CCATGG	4 cut(s)	75, 600, 783, 1427
BspACI	CCGC	7 cut(s)	795, 1008, 1192, 1308, 1371, 1568, 1674
BspCNI	CTCAG	2 cut(s)	489, 658
BspDI	ATCGAT	1 cut(s)	1470
BspFNI	CGCG	1 cut(s)	1194
BspOI	GCTAGC	1 cut(s)	74
BspPI	GGATC	4 cut(s)	58, 329, 342, 1670
BspT107I	GGYRCC	2 cut(s)	691, 1149
BsrDI	GCAATG	2 cut(s)	1038, 1097
BsrFI	RCCGGY	2 cut(s)	224, 530
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	3 cut(s)	544, 1213, 1620
BssAI	RCCGGY	2 cut(s)	224, 530
BssNI	GRCGYC	1 cut(s)	692
BssT1I	CCWWGG	7 cut(s)	75, 330, 600, 783, 837, 1312, 1427
Bst2UI	CCWGG	5 cut(s)	350, 1444, 1490, 1563, 1635
Bst4CI	ACNGT	5 cut(s)	17, 365, 848, 1015, 1185
Bst6I	CTCTTC	1 cut(s)	629
BstACI	GRCGYC	1 cut(s)	692
BstAUI	TGTACA	1 cut(s)	885
BstC8I	GCNNGC	5 cut(s)	72, 226, 728, 1334, 1424
BstDEI	CTNAG	6 cut(s)	153, 476, 666, 951, 957, 1044
BstDSI	CCRYGG	4 cut(s)	75, 600, 783, 1427
BstEII	GGTNACC	2 cut(s)	100, 1303
BstENI	CCTNNNNNAGG	1 cut(s)	1441
BstF5I	GGATG	3 cut(s)	517, 702, 1503
BstFNI	CGCG	1 cut(s)	1194
BstH2I	RGCGCY	2 cut(s)	695, 1333
BstHHI	GCGC	2 cut(s)	694, 1332
BstMAI	GTCTC	2 cut(s)	662, 1023
BstMWI	GCNNNNNNNGC	8 cut(s)	117, 164, 256, 350, 910, 1016, 1329, 1368
BstNI	CCWGG	5 cut(s)	350, 1444, 1490, 1563, 1635
BstNSI	RCATGY	1 cut(s)	1533
BstPAI	GACNNNNGTC	2 cut(s)	846, 923
BstPI	GGTNACC	2 cut(s)	100, 1303
BstSCI	CCNGG	6 cut(s)	348, 751, 1442, 1488, 1561, 1633
BstSFI	CTRYAG	1 cut(s)	1338
BstUI	CGCG	1 cut(s)	1194
BstV1I	GCAGC	1 cut(s)	1250
BstV2I	GAAGAC	3 cut(s)	465, 860, 1398
BstX2I	RGATCY	3 cut(s)	322, 334, 468
BstYI	RGATCY	3 cut(s)	322, 334, 468
Bsu15I	ATCGAT	1 cut(s)	1470
BsuI	GTATCC	1 cut(s)	1001
BsuTUI	ATCGAT	1 cut(s)	1470
BtgI	CCRYGG	4 cut(s)	75, 600, 783, 1427
BtsCI	GGATG	3 cut(s)	517, 702, 1503
BtsI	GCAGTG	1 cut(s)	741
BtsIMutI	CAGTG	7 cut(s)	484, 537, 606, 741, 1011, 1206, 1627
Cac8I	GCNNGC	5 cut(s)	72, 226, 728, 1334, 1424
CfoI	GCGC	2 cut(s)	694, 1332
Cfr10I	RCCGGY	2 cut(s)	224, 530
Cfr13I	GGNCC	7 cut(s)	352, 422, 543, 944, 1073, 1446, 1559
ClaI	ATCGAT	1 cut(s)	1470
CseI	GACGC	2 cut(s)	732, 1244
CsiI	ACCWGGT	1 cut(s)	1561
Csp6I	GTAC	6 cut(s)	382, 802, 886, 1150, 1546, 1594
CspAI	ACCGGT	1 cut(s)	530
CviAII	CATG	9 cut(s)	76, 601, 711, 784, 916, 928, 1300, 1428, 1530
CviQI	GTAC	6 cut(s)	382, 802, 886, 1150, 1546, 1594
DdeI	CTNAG	6 cut(s)	153, 476, 666, 951, 957, 1044
DinI	GGCGCC	1 cut(s)	693
DrdI	GACNNNNNNGTC	2 cut(s)	1241, 1301
DseDI	GACNNNNNNGTC	2 cut(s)	1241, 1301
EaeI	YGGCCR	4 cut(s)	22, 342, 1569, 1602
Eam1104I	CTCTTC	1 cut(s)	629
EarI	CTCTTC	1 cut(s)	629
Ecl136II	GAGCTC	2 cut(s)	250, 373
Eco130I	CCWWGG	7 cut(s)	75, 330, 600, 783, 837, 1312, 1427
Eco24I	GRGCYC	2 cut(s)	252, 375
Eco47I	GGWCC	3 cut(s)	543, 1073, 1559
Eco53kI	GAGCTC	2 cut(s)	250, 373
Eco91I	GGTNACC	2 cut(s)	100, 1303
EcoICRI	GAGCTC	2 cut(s)	250, 373
EcoNI	CCTNNNNNAGG	1 cut(s)	1441
EcoO109I	RGGNCCY	2 cut(s)	352, 1559
EcoO65I	GGTNACC	2 cut(s)	100, 1303
EcoRI	GAATTC	2 cut(s)	1625, 1641
EcoRII	CCWGG	5 cut(s)	348, 1442, 1488, 1561, 1633
EcoT14I	CCWWGG	7 cut(s)	75, 330, 600, 783, 837, 1312, 1427
EcoT38I	GRGCYC	2 cut(s)	252, 375
EgeI	GGCGCC	1 cut(s)	693
EheI	GGCGCC	1 cut(s)	693
ErhI	CCWWGG	7 cut(s)	75, 330, 600, 783, 837, 1312, 1427
Esp3I	CGTCTC	1 cut(s)	662
FaeI	CATG	9 cut(s)	79, 604, 714, 787, 919, 931, 1303, 1431, 1533
FaqI	GGGAC	4 cut(s)	556, 1447, 1572, 1664
FatI	CATG	9 cut(s)	75, 600, 710, 783, 915, 927, 1299, 1427, 1529
FbaI	TGATCA	3 cut(s)	297, 1266, 1479
Fnu4HI	GCNGC	3 cut(s)	1239, 1372, 1569
FokI	GGATG	3 cut(s)	524, 689, 1510
FriOI	GRGCYC	2 cut(s)	252, 375
Fsp4HI	GCNGC	3 cut(s)	1239, 1372, 1569
FspBI	CTAG	1 cut(s)	71
GlaI	GCGC	2 cut(s)	693, 1331
GluI	GCNGC	3 cut(s)	1239, 1372, 1569
GsaI	CCCAGC	1 cut(s)	1674
GsuI	CTGGAG	1 cut(s)	1426
HaeII	RGCGCY	2 cut(s)	695, 1333
HapII	CCGG	5 cut(s)	225, 531, 753, 1071, 1138
HgaI	GACGC	2 cut(s)	732, 1244
HhaI	GCGC	2 cut(s)	694, 1332
Hin1I	GRCGYC	1 cut(s)	692
Hin1II	CATG	9 cut(s)	79, 604, 714, 787, 919, 931, 1303, 1431, 1533
Hin6I	GCGC	2 cut(s)	692, 1330
HinP1I	GCGC	2 cut(s)	692, 1330
HindIII	AAGCTT	1 cut(s)	257
HpaII	CCGG	5 cut(s)	225, 531, 753, 1071, 1138
Hpy166II	GTNNAC	2 cut(s)	886, 1506
Hpy188I	TCNGA	6 cut(s)	204, 339, 629, 852, 1028, 1114
Hpy188III	TCNNGA	9 cut(s)	268, 412, 436, 466, 520, 1252, 1273, 1292, 1453
Hpy8I	GTNNAC	2 cut(s)	886, 1506
Hpy99I	CGWCG	4 cut(s)	395, 657, 1238, 1247
HpyAV	CCTTC	1 cut(s)	1311
HpyCH4III	ACNGT	5 cut(s)	17, 365, 848, 1015, 1185
HpyCH4IV	ACGT	3 cut(s)	380, 652, 857
HpyCH4V	TGCA	6 cut(s)	218, 553, 1200, 1260, 1362, 1459
HpyF10VI	GCNNNNNNNGC	8 cut(s)	117, 164, 256, 350, 910, 1016, 1329, 1368
HpyF3I	CTNAG	6 cut(s)	153, 476, 666, 951, 957, 1044
HpySE526I	ACGT	3 cut(s)	380, 652, 857
Hsp92I	GRCGYC	1 cut(s)	692
Hsp92II	CATG	9 cut(s)	79, 604, 714, 787, 919, 931, 1303, 1431, 1533
HspAI	GCGC	2 cut(s)	692, 1330
KasI	GGCGCC	1 cut(s)	691
KpnI	GGTACC	1 cut(s)	1153
KroI	GCCGGC	1 cut(s)	224
KroNI	GCCGGC	1 cut(s)	226
Ksp22I	TGATCA	3 cut(s)	297, 1266, 1479
LmnI	GCTCC	2 cut(s)	761, 1320
Lsp1109I	GCAGC	1 cut(s)	1250
LweI	GCATC	3 cut(s)	808, 1446, 1689
MabI	ACCWGGT	1 cut(s)	1561
MaeI	CTAG	1 cut(s)	71
MaeII	ACGT	3 cut(s)	380, 652, 857
MaeIII	GTNAC	6 cut(s)	17, 100, 533, 604, 968, 1303
MfeI	CAATTG	1 cut(s)	159
MflI	RGATCY	3 cut(s)	322, 334, 468
MhlI	GDGCHC	2 cut(s)	252, 375
MlsI	TGGCCA	2 cut(s)	344, 1604
MluCI	AATT	6 cut(s)	159, 304, 612, 1588, 1625, 1641
MluNI	TGGCCA	2 cut(s)	344, 1604
Mly113I	GGCGCC	1 cut(s)	692
MmeI	TCCRAC	1 cut(s)	1475
Mox20I	TGGCCA	2 cut(s)	344, 1604
MroNI	GCCGGC	1 cut(s)	224
MroXI	GAANNNNTTC	2 cut(s)	35, 407
MscI	TGGCCA	2 cut(s)	344, 1604
MseI	TTAA	3 cut(s)	377, 642, 762
MslI	CAYNNNNRTG	2 cut(s)	1406, 1454
Msp20I	TGGCCA	2 cut(s)	344, 1604
MspA1I	CMGCKG	2 cut(s)	1371, 1674
MspI	CCGG	5 cut(s)	225, 531, 753, 1071, 1138
MspR9I	CCNGG	6 cut(s)	350, 753, 1444, 1490, 1563, 1635
MunI	CAATTG	1 cut(s)	159
MvaI	CCWGG	5 cut(s)	350, 1444, 1490, 1563, 1635
MvnI	CGCG	1 cut(s)	1194
MwoI	GCNNNNNNNGC	8 cut(s)	117, 164, 256, 350, 910, 1016, 1329, 1368
NaeI	GCCGGC	1 cut(s)	226
NarI	GGCGCC	1 cut(s)	692
NciI	CCSGG	1 cut(s)	753
NcoI	CCATGG	4 cut(s)	75, 600, 783, 1427
NgoMIV	GCCGGC	1 cut(s)	224
NheI	GCTAGC	1 cut(s)	70
NlaIII	CATG	9 cut(s)	79, 604, 714, 787, 919, 931, 1303, 1431, 1533
NmuCI	GTSAC	5 cut(s)	17, 100, 533, 604, 1303
NspI	RCATGY	1 cut(s)	1533
PasI	CCCWGGG	1 cut(s)	1489
PcsI	WCGNNNNNNNCGW	1 cut(s)	1242
PdiI	GCCGGC	1 cut(s)	226
PdmI	GAANNNNTTC	2 cut(s)	35, 407
PflMI	CCANNNNNTGG	1 cut(s)	1093
PinAI	ACCGGT	1 cut(s)	530
PkrI	GCNGC	3 cut(s)	1240, 1373, 1570
PluTI	GGCGCC	1 cut(s)	695
PpuMI	RGGWCCY	1 cut(s)	1559
PshAI	GACNNNNGTC	2 cut(s)	846, 923
Psp124BI	GAGCTC	2 cut(s)	252, 375
Psp5II	RGGWCCY	1 cut(s)	1559
Psp6I	CCWGG	5 cut(s)	348, 1442, 1488, 1561, 1633
PspEI	GGTNACC	2 cut(s)	100, 1303
PspFI	CCCAGC	1 cut(s)	1670
PspGI	CCWGG	5 cut(s)	348, 1442, 1488, 1561, 1633
PspPI	GGNCC	7 cut(s)	352, 422, 543, 944, 1073, 1446, 1559
PspPPI	RGGWCCY	1 cut(s)	1559
PsuI	RGATCY	3 cut(s)	322, 334, 468
RsaI	GTAC	6 cut(s)	383, 803, 887, 1151, 1547, 1595
RsaNI	GTAC	6 cut(s)	382, 802, 886, 1150, 1546, 1594
RseI	CAYNNNNRTG	2 cut(s)	1406, 1454
SacI	GAGCTC	2 cut(s)	252, 375
SaqAI	TTAA	3 cut(s)	377, 642, 762
SatI	GCNGC	3 cut(s)	1239, 1372, 1569
Sau96I	GGNCC	7 cut(s)	352, 422, 543, 944, 1073, 1446, 1559
ScaI	AGTACT	1 cut(s)	1547
ScrFI	CCNGG	6 cut(s)	350, 753, 1444, 1490, 1563, 1635
SduI	GDGCHC	2 cut(s)	252, 375
SexAI	ACCWGGT	1 cut(s)	1561
SfaNI	GCATC	3 cut(s)	808, 1446, 1689
SfcI	CTRYAG	1 cut(s)	1338
SfiI	GGCCNNNNNGGCC	1 cut(s)	350
SfoI	GGCGCC	1 cut(s)	693
SgrAI	CRCCGGYG	1 cut(s)	530
SinI	GGWCC	3 cut(s)	543, 1073, 1559
SmiMI	CAYNNNNRTG	2 cut(s)	1406, 1454
SmlI	CTYRAG	3 cut(s)	356, 464, 824
SmoI	CTYRAG	3 cut(s)	356, 464, 824
Sse9I	AATT	6 cut(s)	159, 304, 612, 1588, 1625, 1641
SsiI	CCGC	7 cut(s)	795, 1008, 1192, 1308, 1371, 1568, 1674
SspDI	GGCGCC	1 cut(s)	691
SspMI	CTAG	1 cut(s)	71
SstI	GAGCTC	2 cut(s)	252, 375
StyD4I	CCNGG	6 cut(s)	348, 751, 1442, 1488, 1561, 1633
StyI	CCWWGG	7 cut(s)	75, 330, 600, 783, 837, 1312, 1427
TaaI	ACNGT	5 cut(s)	17, 365, 848, 1015, 1185
TaiI	ACGT	3 cut(s)	383, 655, 860
TaqI	TCGA	6 cut(s)	390, 411, 456, 732, 1218, 1470
TasI	AATT	6 cut(s)	159, 304, 612, 1588, 1625, 1641
TatI	WGTACW	3 cut(s)	801, 885, 1545
TauI	GCSGC	2 cut(s)	1374, 1571
Tru1I	TTAA	3 cut(s)	377, 642, 762
Tru9I	TTAA	3 cut(s)	377, 642, 762
TscAI	CASTG	7 cut(s)	484, 544, 613, 748, 1018, 1213, 1627
TseFI	GTSAC	5 cut(s)	17, 100, 533, 604, 1303
TseI	GCWGC	1 cut(s)	1238
Tsp45I	GTSAC	5 cut(s)	17, 100, 533, 604, 1303
TspDTI	ATGAA	3 cut(s)	922, 1027, 1213
TspGWI	ACGGA	1 cut(s)	606
TspRI	CASTG	7 cut(s)	484, 544, 613, 748, 1018, 1213, 1627
Van91I	CCANNNNNTGG	1 cut(s)	1093
VpaK11BI	GGWCC	3 cut(s)	543, 1073, 1559
XagI	CCTNNNNNAGG	1 cut(s)	1441
XapI	RAATTY	2 cut(s)	1625, 1641
XceI	RCATGY	1 cut(s)	1533
XcmI	CCANNNNNNNNNTGG	1 cut(s)	337
XmnI	GAANNNNTTC	2 cut(s)	35, 407
XspI	CTAG	1 cut(s)	71
ZrmI	AGTACT	1 cut(s)	1547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.