AT4G17410

DWNN domain, a CCHC-type zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0001377
Physical Location & Seq
Forward (+)
9715761 .. 9721932
6172 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G17410.2

Sequence Viewer

Length: 2481 bp
ATGGCAATATATTACAAGTTTAAGAGTGCGAGGGATTATGATACCATCTCCATGGATGGTCCTTTTATAACAGTTGGTTTACTCAAAGAAAAAATTTACGAAACTAAGCATTTGGGAAGTGGTAAAGACCTTGACATTGTCATCTCTAATGCCCAAACTAATGAAGAATATCTGGATGAAGCAATGTTAATACCAAAAAATACTTCTGTGCTAATTCGCCGGGTCCCTGGACGCCCTCGCATCAGAATTATTACCAGAGAAGAGCCGAGAGTCGAGGATAAAGTGGAAAACGTTCAAGCTGATATGAACAATGTTATTACTGCTGATGCATCTCCCGTTGAAGATGAATTCGATGAGTTTGGGAATGATTTGTATTCAATTCCTGATGCCCCAGCAGTCCATTCTAATAACCTATGTCATGATTCTGCACCAGCTGATGATGAAGAAACCAAGCTAAAGGCATTAATTGACACTCCAGCACTAGACTGGCATCAACAAGGTGCAGATAGTTTTGGCCCGGGTAGAGGTTATGGGAGGGGTATGGCTGGAAGGATGGGTGGCCGCGGTTTTGGAATGGAGAGGACAACACCGCCACCAGGCTATGTTTGCCATCGGTGCAATGTTTCTGGACATTTTATTCAACACTGCTCCACAAACGGTAATCCTAACTTTGATGTTAAGAGAGTTAAACCACCTACTGGTATCCCCAAGTCGATGCTGATGGCAACCCCAAATGGCTCTTACTCCTTGCCAAGTGGCGCAGTAGCAGTTTTAAAACCAAACGAGGATGCGTTTGAGAAGGAAATGGAGGGATTGACATCAACAACACGATCAGTCGGGGAATTTCCTCCTGAATTAAAATGCCCATTGTGTAAAGAAGTGATGAGAGATGCTGCACTGGCAAGCAAATGCTGCCTCAAGAGCTACTGTGACAAGTGTATTAGAGATCACATCATTGCAAAGTCAATGTGTGTTTGTGGAGCAACTCATGTCCTAGCTGATGATCTTCTACCTAACAAAACCCTAAGGGATACTATAAACCGGATATTGGAGTCTGGTAACAGTAGTGCTGAGAACGCTGGCAGCATGTGTCAAGTCCAAGATATGGAGTCTGTACGGTGTCCACCTCCCAAGGCTCTATCTCCTACTACATCTGCTGCATCTGGAGGCGAAAAGAAACCAGCTCCTAGTAACAACAATGAGACTTCAACTCTAAAGCCGTCAATAGAAATAGCAGAGATCACAAGTGCTTGGGCGTCTGCAGAAATAGTTAAAGTGGAAAAGCCAGTTGATGCATCTGCAAACATTCAAGGATCCTCAAATGGCAAGGAAGCAGCAGTTTCACAACTGAATACGCAGCCCCCCAAGGAAGAAATGCCGCAGCAGGTTGCTTCTGGGGAGCAAGGAAAAAGGAAGAAGAAGAAACCTCGGATGAGTGGAACCGATCTAGCAGGCCCTGACTATATGATGCCCATGGGCCCAGGTCCCGGTAATCAGTACTTCAATGGTTTCCAACCCGGCTTCAACGGCGTTCAACATGGGTTCAATGGCGTTCAACCTGGGTTCAATGGCTTTCATCATGGTTTCAATGGGTTTCCAGGCCCTTTTCCTGGTGCGATGCCTCCTTTTGTTGGCTATGGATTTGGCGGTGTGATCCATCCAGATCCTTTCGCTGCACAGGGCTTTGGGTTCCCTAATATACCACCACCTTATAGGGACCTTGCGGAGATGGGGAATCGTATGAATCTCCAGCATCCTATAATGGGGAGAGAAGAATTTGAAGCTAAGAAAACTGAGATGAAAAGAAAGCGTGAAAACGAGATTCGACGATCGGAAGGAGGGAATGTCGTCAGGGACAGTGAAAAGAGCAGAATAATGAACAACTCGGCAGTCACTTCCTCACCCGTGAAGCCAAAATCTAGACAAGGACCTCCGCCGCCGATTTCGTCTGATTACGACCGTCGCAGGCGATCGGATAGATCGTCACCGGAGCGTCAGTCATCTCGAAGGTTCACCTCTCCTCCTCGATCATCCAGCAGGAAATCTGAGCGTGATCGTCACCATGACCTCGATTCCGAACACGACCGCCGCCGTGACCGTCCCAGAGAGACAGATCGCAAGCACCGTAAGAGATCCGAAAAGTCATCATCGGATCCAACTGTAGAGATAGACGATAACAATAAGTCTAACGTGTTCACTCGGATAAGCTTTCCAGAGGAATCTTCTGGCAAACAACGAAAGACATCAAAGTCTTCTCCAGCGCCTCCAGAGAGCTCAGTCGCCCCAGTTTCATCGGGTCGTCGTCATCACAGTCGAAGAGAAAGAGAGATGGTGGAATACGATTCAAGTGATGATGAAGACAGACATTTCAAGAGGAAGCCATCAAGGTACAAGCGATCTCCTTCGGTTGCACCTTCTGACGCCGGTGATGAGCATTTCCGTCATTCTAAGCGATCTAAAGGAGAAAGAGCGCGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000209 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005815 GO:0005829 GO:0005856 GO:0006275 GO:0006325 GO:0006464 GO:0006479 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009635 GO:0009636 GO:0009651 GO:0009743 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010555 GO:0010556 GO:0015630 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016604 GO:0016607 GO:0016740 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032259 GO:0032446 GO:0032991 GO:0033554 GO:0034969 GO:0034971 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051276 GO:0051603 GO:0051716 GO:0060255 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071840 GO:0072756 GO:0080090 GO:0080134 GO:0097237 GO:0140096 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902882 GO:1902883 GO:1902884 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DWNN zf-CCHC_2

Protein Analysis

826

Amino Acids

91.31

Weight (kDa)

8.87

Isoelectric Point (pI)

55.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DWNN PF08783 3 - 76 4.8e-29 DWNN domain
zf-CCHC_2 PF13696 198 - 216 3e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 68
AasI GACNNNNNNGTC 1 cut(s) 2248
Acc36I ACCTGC 1 cut(s) 1375
AccB7I CCANNNNNTGG 2 cut(s) 698, 1105
AccII CGCG 2 cut(s) 564, 2473
AclI AACGTT 1 cut(s) 291
AclWI GGATC 7 cut(s) 1308, 1321, 1648, 1658, 2127, 2147, 2160
AcoI YGGCCR 1 cut(s) 559
AcsI RAATTY 4 cut(s) 93, 347, 842, 1775
AcyI GRCGYC 3 cut(s) 232, 1256, 2421
AfaI GTAC 3 cut(s) 1116, 1499, 2390
AfiI CCNNNNNNNGG 9 cut(s) 524, 596, 698, 1048, 1105, 1487, 1610, 1631, 1763
AflIII ACRYGT 1 cut(s) 2190
AjnI CCWGG 6 cut(s) 226, 595, 1480, 1558, 1597, 1609
AjuI GAANNNNNNNTTGG 2 cut(s) 187, 219
Alw21I GWGCWC 1 cut(s) 2276
Alw26I GTCTC 2 cut(s) 1196, 2102
AlwI GGATC 7 cut(s) 1308, 1321, 1648, 1658, 2127, 2147, 2160
AlwNI CAGNNNCTG 1 cut(s) 1457
Ama87I CYCGRG 1 cut(s) 517
AoxI GGCC 5 cut(s) 514, 559, 1453, 1477, 1600
ApaI GGGCCC 1 cut(s) 1481
ApeKI GCWGC 8 cut(s) 893, 912, 1083, 1157, 1334, 1357, 1381, 1673
ApoI RAATTY 4 cut(s) 93, 347, 842, 1775
AseI ATTAAT 1 cut(s) 464
Asp700I GAANNNNTTC 1 cut(s) 291
AspLEI GCGC 3 cut(s) 761, 2263, 2473
AsuC2I CCSGG 5 cut(s) 221, 518, 519, 1488, 1518
AsuHPI GGTGA 5 cut(s) 1893, 1977, 2005, 2051, 2438
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 5 cut(s) 59, 223, 1484, 1717, 1928
AxyI CCTNAGG 1 cut(s) 1025
BaeGI GKGCMC 1 cut(s) 1481
BamHI GGATCC 2 cut(s) 1313, 2152
BanII GRGCYC 2 cut(s) 1481, 2276
BbsI GAAGAC 2 cut(s) 2244, 2364
Bbv12I GWGCWC 1 cut(s) 2276
BbvI GCAGC 8 cut(s) 880, 899, 1095, 1144, 1346, 1369, 1393, 1660
BccI CCATC 9 cut(s) 50, 53, 547, 618, 715, 1665, 1723, 2323, 2389
BceAI ACGGC 3 cut(s) 1204, 1543, 2076
BciT130I CCWGG 6 cut(s) 228, 597, 1482, 1560, 1599, 1611
BciVI GTATCC 2 cut(s) 713, 1024
BcnI CCSGG 5 cut(s) 221, 518, 519, 1488, 1518
BcoDI GTCTC 2 cut(s) 1196, 2102
BfaI CTAG 5 cut(s) 482, 995, 1188, 1448, 1920
BfmI CTRYAG 2 cut(s) 1260, 2160
BfoI RGCGCY 1 cut(s) 2264
BfuAI ACCTGC 1 cut(s) 1375
BfuI GTATCC 2 cut(s) 713, 1024
BmcAI AGTACT 1 cut(s) 1499
Bme18I GGWCC 5 cut(s) 59, 223, 1484, 1717, 1928
BmeT110I CYCGRG 1 cut(s) 517
BmiI GGNNCC 9 cut(s) 224, 225, 1315, 1441, 1479, 1486, 1691, 1718, 2154
BmrI ACTGGG 1 cut(s) 2279
BmuI ACTGGG 1 cut(s) 2279
BpiI GAAGAC 2 cut(s) 2244, 2364
BpmI CTGGAG 5 cut(s) 459, 1185, 1733, 2241, 2250
BpuEI CTTGAG 1 cut(s) 902
BpuMI CCSGG 5 cut(s) 221, 518, 519, 1488, 1518
BsaBI GATNNNNATC 1 cut(s) 817
BsaHI GRCGYC 3 cut(s) 232, 1256, 2421
BsaWI WCCGGW 2 cut(s) 1041, 1987
BsaXI ACNNNNNCTCC 6 cut(s) 1830, 1860, 1982, 2005, 2012, 2035
Bsc4I CCNNNNNNNGG 9 cut(s) 524, 596, 698, 1048, 1105, 1487, 1610, 1631, 1763
Bse118I RCCGGY 1 cut(s) 2423
Bse1I ACTGG 5 cut(s) 491, 703, 903, 1286, 2285
Bse21I CCTNAGG 1 cut(s) 1025
Bse3DI GCAATG 3 cut(s) 189, 625, 954
Bse8I GATNNNNATC 1 cut(s) 817
BseBI CCWGG 6 cut(s) 228, 597, 1482, 1560, 1599, 1611
BseGI GGATG 8 cut(s) 61, 181, 558, 793, 1437, 1657, 1753, 2030
BseJI GATNNNNATC 1 cut(s) 817
BseLI CCNNNNNNNGG 9 cut(s) 524, 596, 698, 1048, 1105, 1487, 1610, 1631, 1763
BseMI GCAATG 3 cut(s) 189, 625, 954
BseMII CTCAG 4 cut(s) 1062, 1785, 2037, 2289
BseNI ACTGG 5 cut(s) 491, 703, 903, 1286, 2285
BseRI GAGGAG 2 cut(s) 2010, 2013
BseSI GKGCMC 1 cut(s) 1481
BseXI GCAGC 8 cut(s) 880, 899, 1095, 1144, 1346, 1369, 1393, 1660
BseYI CCCAGC 1 cut(s) 391
BsgI GTGCAG 4 cut(s) 411, 522, 879, 1659
Bsh1236I CGCG 2 cut(s) 564, 2473
Bsh1285I CGRYCG 4 cut(s) 1832, 1960, 1973, 2086
BshFI GGCC 5 cut(s) 516, 561, 1455, 1479, 1602
BsiEI CGRYCG 4 cut(s) 1832, 1960, 1973, 2086
BsiHKAI GWGCWC 1 cut(s) 2276
BsiHKCI CYCGRG 1 cut(s) 517
BsiSI CCGG 7 cut(s) 220, 518, 1042, 1488, 1518, 1988, 2424
BslFI GGGAC 5 cut(s) 209, 1470, 1730, 1868, 2085
BslI CCNNNNNNNGG 9 cut(s) 524, 596, 698, 1048, 1105, 1487, 1610, 1631, 1763
BsmAI GTCTC 2 cut(s) 1196, 2102
BsmFI GGGAC 5 cut(s) 209, 1470, 1730, 1868, 2085
BsnI GGCC 5 cut(s) 516, 561, 1455, 1479, 1602
BsoBI CYCGRG 1 cut(s) 517
Bsp120I GGGCCC 1 cut(s) 1477
Bsp1286I GDGCHC 2 cut(s) 1481, 2276
Bsp19I CCATGG 2 cut(s) 51, 1473
BspANI GGCC 5 cut(s) 516, 561, 1455, 1479, 1602
BspCNI CTCAG 4 cut(s) 1063, 1786, 2038, 2288
BspFNI CGCG 2 cut(s) 564, 2473
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 9 cut(s) 224, 225, 1315, 1441, 1479, 1486, 1691, 1718, 2154
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 1 cut(s) 1375
BspPI GGATC 7 cut(s) 1308, 1321, 1648, 1658, 2127, 2147, 2160
BspQI GCTCTTC 1 cut(s) 255
BsrDI GCAATG 3 cut(s) 189, 625, 954
BsrFI RCCGGY 1 cut(s) 2423
BsrI ACTGG 5 cut(s) 491, 703, 903, 1286, 2285
BssAI RCCGGY 1 cut(s) 2423
BssNI GRCGYC 3 cut(s) 232, 1256, 2421
BssT1I CCWWGG 4 cut(s) 51, 1131, 1365, 1473
Bst2UI CCWGG 6 cut(s) 228, 597, 1482, 1560, 1599, 1611
Bst6I CTCTTC 2 cut(s) 255, 2311
BstACI GRCGYC 3 cut(s) 232, 1256, 2421
BstAPI GCANNNNNTGC 1 cut(s) 912
BstC8I GCNNGC 6 cut(s) 904, 1081, 1453, 1967, 2120, 2475
BstDEI CTNAG 8 cut(s) 105, 1025, 1071, 1785, 1794, 2046, 2275, 2448
BstDSI CCRYGG 3 cut(s) 51, 562, 1473
BstF5I GGATG 8 cut(s) 61, 181, 558, 793, 1437, 1657, 1753, 2030
BstFNI CGCG 2 cut(s) 564, 2473
BstH2I RGCGCY 1 cut(s) 2264
BstHHI GCGC 3 cut(s) 761, 2263, 2473
BstMAI GTCTC 2 cut(s) 1196, 2102
BstMCI CGRYCG 4 cut(s) 1832, 1960, 1973, 2086
BstMWI GCNNNNNNNGC 7 cut(s) 606, 615, 899, 912, 921, 1076, 1527
BstNI CCWGG 6 cut(s) 228, 597, 1482, 1560, 1599, 1611
BstNSI RCATGY 1 cut(s) 1090
BstSFI CTRYAG 2 cut(s) 1260, 2160
BstSLI GKGCMC 1 cut(s) 1481
BstUI CGCG 2 cut(s) 564, 2473
BstV1I GCAGC 8 cut(s) 880, 899, 1095, 1144, 1346, 1369, 1393, 1660
BstV2I GAAGAC 2 cut(s) 2244, 2364
BstX2I RGATCY 4 cut(s) 1313, 1663, 2132, 2152
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 4 cut(s) 1313, 1663, 2132, 2152
Bsu36I CCTNAGG 1 cut(s) 1025
BsuI GTATCC 2 cut(s) 713, 1024
BsuRI GGCC 5 cut(s) 516, 561, 1455, 1479, 1602
BtgI CCRYGG 3 cut(s) 51, 562, 1473
BtgZI GCGATG 1 cut(s) 1631
BtsCI GGATG 8 cut(s) 61, 181, 558, 793, 1437, 1657, 1753, 2030
BtsI GCAGTG 1 cut(s) 643
BtsIMutI CAGTG 3 cut(s) 643, 896, 1864
BveI ACCTGC 1 cut(s) 1375
Cac8I GCNNGC 6 cut(s) 904, 1081, 1453, 1967, 2120, 2475
CaiI CAGNNNCTG 1 cut(s) 1457
CciI TCATGA 1 cut(s) 418
CfoI GCGC 3 cut(s) 761, 2263, 2473
Cfr10I RCCGGY 1 cut(s) 2423
Cfr42I CCGCGG 1 cut(s) 565
Cfr9I CCCGGG 1 cut(s) 517
CseI GACGC 4 cut(s) 240, 1245, 1982, 2429
Csp6I GTAC 3 cut(s) 1115, 1498, 2389
CviAII CATG 8 cut(s) 52, 419, 989, 1087, 1474, 1538, 1580, 2063
CviQI GTAC 3 cut(s) 1115, 1498, 2389
DdeI CTNAG 8 cut(s) 105, 1025, 1071, 1785, 1794, 2046, 2275, 2448
DraI TTTAAA 1 cut(s) 774
DrdI GACNNNNNNGTC 1 cut(s) 2248
DseDI GACNNNNNNGTC 1 cut(s) 2248
EaeI YGGCCR 1 cut(s) 559
Eam1104I CTCTTC 2 cut(s) 255, 2311
EarI CTCTTC 2 cut(s) 255, 2311
EciI GGCGGA 1 cut(s) 1923
Ecl136II GAGCTC 1 cut(s) 2274
Eco130I CCWWGG 4 cut(s) 51, 1131, 1365, 1473
Eco24I GRGCYC 2 cut(s) 1481, 2276
Eco47I GGWCC 5 cut(s) 59, 223, 1484, 1717, 1928
Eco53kI GAGCTC 1 cut(s) 2274
Eco81I CCTNAGG 1 cut(s) 1025
Eco88I CYCGRG 1 cut(s) 517
EcoICRI GAGCTC 1 cut(s) 2274
EcoO109I RGGNCCY 6 cut(s) 223, 1454, 1484, 1601, 1717, 1928
EcoRI GAATTC 1 cut(s) 347
EcoRII CCWGG 6 cut(s) 226, 595, 1480, 1558, 1597, 1609
EcoT14I CCWWGG 4 cut(s) 51, 1131, 1365, 1473
EcoT22I ATGCAT 2 cut(s) 331, 1297
EcoT38I GRGCYC 2 cut(s) 1481, 2276
ErhI CCWWGG 4 cut(s) 51, 1131, 1365, 1473
FaeI CATG 8 cut(s) 55, 422, 992, 1090, 1477, 1541, 1583, 2066
FaqI GGGAC 5 cut(s) 209, 1470, 1730, 1868, 2085
FatI CATG 8 cut(s) 51, 418, 988, 1086, 1473, 1537, 1579, 2062
FokI GGATG 8 cut(s) 68, 188, 565, 800, 1444, 1644, 1740, 2017
FriOI GRGCYC 2 cut(s) 1481, 2276
FspBI CTAG 5 cut(s) 482, 995, 1188, 1448, 1920
GlaI GCGC 3 cut(s) 760, 2262, 2472
GsaI CCCAGC 1 cut(s) 395
GsuI CTGGAG 5 cut(s) 459, 1185, 1733, 2241, 2250
HaeII RGCGCY 1 cut(s) 2264
HaeIII GGCC 5 cut(s) 516, 561, 1455, 1479, 1602
HapII CCGG 7 cut(s) 220, 518, 1042, 1488, 1518, 1988, 2424
HgaI GACGC 4 cut(s) 240, 1245, 1982, 2429
HhaI GCGC 3 cut(s) 761, 2263, 2473
Hin1I GRCGYC 3 cut(s) 232, 1256, 2421
Hin1II CATG 8 cut(s) 55, 422, 992, 1090, 1477, 1541, 1583, 2066
Hin6I GCGC 3 cut(s) 759, 2261, 2471
HinP1I GCGC 3 cut(s) 759, 2261, 2471
HindIII AAGCTT 1 cut(s) 2206
HpaII CCGG 7 cut(s) 220, 518, 1042, 1488, 1518, 1988, 2424
HphI GGTGA 5 cut(s) 1893, 1977, 2005, 2051, 2438
Hpy166II GTNNAC 4 cut(s) 80, 1124, 2013, 2196
Hpy8I GTNNAC 4 cut(s) 80, 1124, 2013, 2196
Hpy99I CGWCG 3 cut(s) 1830, 1965, 2304
HpyAV CCTTC 6 cut(s) 543, 793, 1829, 2001, 2412, 2424
HpyCH4IV ACGT 2 cut(s) 291, 2190
HpyF10VI GCNNNNNNNGC 7 cut(s) 606, 615, 899, 912, 921, 1076, 1527
HpyF3I CTNAG 8 cut(s) 105, 1025, 1071, 1785, 1794, 2046, 2275, 2448
HpySE526I ACGT 2 cut(s) 291, 2190
Hsp92I GRCGYC 3 cut(s) 232, 1256, 2421
Hsp92II CATG 8 cut(s) 55, 422, 992, 1090, 1477, 1541, 1583, 2066
HspAI GCGC 3 cut(s) 759, 2261, 2471
KflI GGGWCCC 1 cut(s) 223
KspI CCGCGG 1 cut(s) 565
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 5 cut(s) 653, 980, 1189, 1399, 1990
Lsp1109I GCAGC 8 cut(s) 880, 899, 1095, 1144, 1346, 1369, 1393, 1660
MaeI CTAG 5 cut(s) 482, 995, 1188, 1448, 1920
MaeII ACGT 2 cut(s) 291, 2190
MaeIII GTNAC 7 cut(s) 929, 1058, 1190, 1891, 1983, 2057, 2093
MflI RGATCY 4 cut(s) 1313, 1663, 2132, 2152
MhlI GDGCHC 2 cut(s) 1481, 2276
MluCI AATT 9 cut(s) 93, 213, 246, 347, 378, 465, 842, 854, 1775
MlyI GAGTC 3 cut(s) 279, 1061, 1118
MmeI TCCRAC 2 cut(s) 1537, 2180
Mph1103I ATGCAT 2 cut(s) 331, 1297
MroXI GAANNNNTTC 1 cut(s) 291
MseI TTAA 8 cut(s) 21, 188, 464, 678, 687, 773, 857, 1272
MslI CAYNNNNRTG 1 cut(s) 50
MspA1I CMGCKG 2 cut(s) 434, 564
MspI CCGG 7 cut(s) 220, 518, 1042, 1488, 1518, 1988, 2424
MvaI CCWGG 6 cut(s) 228, 597, 1482, 1560, 1599, 1611
MvnI CGCG 2 cut(s) 564, 2473
MwoI GCNNNNNNNGC 7 cut(s) 606, 615, 899, 912, 921, 1076, 1527
NciI CCSGG 5 cut(s) 221, 518, 519, 1488, 1518
NcoI CCATGG 2 cut(s) 51, 1473
NlaIII CATG 8 cut(s) 55, 422, 992, 1090, 1477, 1541, 1583, 2066
NlaIV GGNNCC 9 cut(s) 224, 225, 1315, 1441, 1479, 1486, 1691, 1718, 2154
NmeAIII GCCGAG 2 cut(s) 291, 1865
NmuCI GTSAC 5 cut(s) 929, 1891, 1983, 2057, 2093
NsiI ATGCAT 2 cut(s) 331, 1297
NspI RCATGY 1 cut(s) 1090
PagI TCATGA 1 cut(s) 418
PciSI GCTCTTC 1 cut(s) 255
PcsI WCGNNNNNNNCGW 2 cut(s) 1979, 2122
PdmI GAANNNNTTC 1 cut(s) 291
PfeI GAWTC 7 cut(s) 422, 1735, 1744, 1822, 2072, 2219, 2342
PflFI GACNNNGTC 1 cut(s) 137
PflMI CCANNNNNTGG 2 cut(s) 698, 1105
Ple19I CGATCG 2 cut(s) 1832, 1973
PleI GAGTC 3 cut(s) 278, 1060, 1117
PpsI GAGTC 3 cut(s) 278, 1060, 1117
PpuMI RGGWCCY 4 cut(s) 223, 1484, 1717, 1928
PshBI ATTAAT 1 cut(s) 464
PsiI TTATAA 1 cut(s) 68
Psp124BI GAGCTC 1 cut(s) 2276
Psp1406I AACGTT 1 cut(s) 291
Psp5II RGGWCCY 4 cut(s) 223, 1484, 1717, 1928
Psp6I CCWGG 6 cut(s) 226, 595, 1480, 1558, 1597, 1609
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 6 cut(s) 226, 595, 1480, 1558, 1597, 1609
PspN4I GGNNCC 9 cut(s) 224, 225, 1315, 1441, 1479, 1486, 1691, 1718, 2154
PspOMI GGGCCC 1 cut(s) 1477
PspPPI RGGWCCY 4 cut(s) 223, 1484, 1717, 1928
PstI CTGCAG 1 cut(s) 1264
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 4 cut(s) 1313, 1663, 2132, 2152
PsyI GACNNNGTC 1 cut(s) 137
PvuI CGATCG 2 cut(s) 1832, 1973
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 3 cut(s) 1116, 1499, 2390
RsaNI GTAC 3 cut(s) 1115, 1498, 2389
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 2276
SacII CCGCGG 1 cut(s) 565
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 8 cut(s) 21, 188, 464, 678, 687, 773, 857, 1272
ScaI AGTACT 1 cut(s) 1499
SchI GAGTC 3 cut(s) 279, 1061, 1118
SduI GDGCHC 2 cut(s) 1481, 2276
SfcI CTRYAG 2 cut(s) 1260, 2160
Sfr303I CCGCGG 1 cut(s) 565
SgrAI CRCCGGYG 1 cut(s) 2423
SgrBI CCGCGG 1 cut(s) 565
SinI GGWCC 5 cut(s) 59, 223, 1484, 1717, 1928
SmaI CCCGGG 1 cut(s) 519
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 1 cut(s) 917
SmoI CTYRAG 1 cut(s) 917
Sse9I AATT 9 cut(s) 93, 213, 246, 347, 378, 465, 842, 854, 1775
SspMI CTAG 5 cut(s) 482, 995, 1188, 1448, 1920
SstI GAGCTC 1 cut(s) 2276
StyI CCWWGG 4 cut(s) 51, 1131, 1365, 1473
TaiI ACGT 2 cut(s) 294, 2193
TaqI TCGA 8 cut(s) 273, 351, 713, 1825, 2005, 2026, 2070, 2314
TasI AATT 9 cut(s) 93, 213, 246, 347, 378, 465, 842, 854, 1775
TatI WGTACW 1 cut(s) 1497
TauI GCSGC 4 cut(s) 564, 1381, 1939, 2091
TfiI GAWTC 7 cut(s) 422, 1735, 1744, 1822, 2072, 2219, 2342
Tru1I TTAA 8 cut(s) 21, 188, 464, 678, 687, 773, 857, 1272
Tru9I TTAA 8 cut(s) 21, 188, 464, 678, 687, 773, 857, 1272
TscAI CASTG 3 cut(s) 650, 903, 1864
TseFI GTSAC 5 cut(s) 929, 1891, 1983, 2057, 2093
TseI GCWGC 8 cut(s) 893, 912, 1083, 1157, 1334, 1357, 1381, 1673
Tsp45I GTSAC 5 cut(s) 929, 1891, 1983, 2057, 2093
TspGWI ACGGA 1 cut(s) 2429
TspMI CCCGGG 1 cut(s) 517
TspRI CASTG 3 cut(s) 650, 903, 1864
Tth111I GACNNNGTC 1 cut(s) 137
Van91I CCANNNNNTGG 2 cut(s) 698, 1105
VpaK11BI GGWCC 5 cut(s) 59, 223, 1484, 1717, 1928
VspI ATTAAT 1 cut(s) 464
XapI RAATTY 4 cut(s) 93, 347, 842, 1775
XbaI TCTAGA 1 cut(s) 1919
XceI RCATGY 1 cut(s) 1090
XcmI CCANNNNNNNNNTGG 1 cut(s) 483
XmaI CCCGGG 1 cut(s) 517
XmnI GAANNNNTTC 1 cut(s) 291
XspI CTAG 5 cut(s) 482, 995, 1188, 1448, 1920
ZrmI AGTACT 1 cut(s) 1499
Zsp2I ATGCAT 2 cut(s) 331, 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.