Rh7DG215600

DWNN domain, A CCHC-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0001377
Physical Location & Seq
Reverse (-)
20778548 .. 20785551
7004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG215600.1

Sequence Viewer

Length: 2217 bp
ATGGCGGTGTACTATAAATTTAAGAGTGCAAGAGATTATGATTCTATTGCTATGGACGGTCCTTTCATCTCAGTTGGTATACTCAAAGAAAAAATATTTGAATCCAAGCATTTAGGGAGGGGTACTGATTTCGACCTTGTGGTCACCAATGCCCAGACCAATGAAGAGTATCTTGATGAAGCAACGTTGATTCCAAAAAATACCTCAGTTTTAATTCGCCGTGTACCTGGACGCCCTCGCATGCCCATTGTTACTGATTCAGAGCATAAAGTAGAAGATATGGTGGAGAACATTGAACCCGAAAGGACTAGCTTTCTGGGAGCTGGTTCGTCTGTGAATCCTGAGCCAGACTGGGATGATCTTGGGGGTGATTTGTACGAAATTCCTGAAGTTTTGCCAGTGCAGCCAAGTTATGCGGTTCCGGATATTCCACCATCAAATAAAGCTGATGAAGATAGCAAGCTTAAGGCTTTAATCGACACTCCAGTATTAGACTGGCAACATCAAGGCGTTGACGGCTATGGTCCTGGTAGAGGTTTTGGCCGTGGTATGAATGGGAGAATGGGTGGACGTGGTTTTGGTCGAACAGGAGTGTTTGAGAAAAAAACACCTCCACAGGGCTATATATGTCACAGGTGTAAGGTTCCTGGTCATTATATTCAGCACTGCCCTACAAATGGTGATCCAAACTATGACATCAAAAGAGTGAAGCCACCCACTGGCATTCCCAAGTCCATGTTGATAGCAACCCCAGATGGCTCATATGCACTGCCGAGTGGTGCAGTAGCTGTATTGAGGCCGAATGAGGCTGCTTTTGAGAAAGAGATCGAAGGTTTACCGTCTACACGTTCTGTTGGTGATTTACCACCTGAGCTACACTGCCCCTTGTGCAAGGAAGTGATGAAAGATGCTGTTTTAACGAGCAAGTGTTGCTTTAAGAGCTTTTGTGATAAGTGTATCAGGAATTACATTACGTCAAAGTCAGTGTGTGTCTGTGGGGCTACAAATACACTTGCAGATGATCTACTGCCAAATAAGACTCTCAGGGATACCATCAATCGAATCTTGGAGTCTGGTAACAGTAGTACTGATAACGCTGGGAGTGCTTTCCAAGTTCAAGATATGGAGTCTGCACGCTGCCCACAACCCAAGATTCCTTCCCCTACTTTATCTGCTGCATCAAAGGGAGAAAATAAGCCTTTACCTTTGCATGAAGAAGCTCTGAAGACACAGGAGACCGTAGATGAGGTAAAACCTGTTCTTGCCCCACAGCAGATGTTAGAGAATGTGAGGAATACAAAAGTAGCCGATGCATCTGAAGCTACCCATGAGTCAATGAGTGTAAAGGAACCTGCATCCCAAGGGAGTGCTCCCCTGGTTGATGAAGAAGTGCAGCAGAGGCTGGCCTCTGTGGAGGCAGGAAAGAAAAGGAAAAAGAAGAAAGTTCGCATGCCTGCAAACGAAATGCAATGGAAGACACCTCAAGACCTTGCAGCTGAAAACTACATGATGCATATGGGGCCCTCTGCTTATAATCCATACTGGAATGGCATGCAACCTGGCATGGGCATGGATGGATATATGCCACCATATGGTGCTCCTATGCCATATATGGGGTATGGTCTAGGTCCTATGGACATGCCATTTGGTGGTCCTTTCCCACCGGACTCATTTGGTGGTCAAGGTTATATGATGCCTATGGTTCCACCTCAGAGGGATCTTGCGGACTTTGGTATGGGTATGGGAATGAATGGAATGAATGTCGGACCTCCTCCTATCATGAGCAGAGAGGAATTTGAGGCTCGGAAAGCTGATTTGAGGAGGAAGCGTGAAAATGAGAGACGGGGCCAAAGGGAGTTCTCCAAAGATCGGGAATATGGAAGGGATGTGAGTGGTGATGGCGATGTGCCTCCAATGAAGTCCAAATCAGTACGTCTTTATTGTGCCAATTTCCATCTCTTCTTATCATTTGTATACTGCAGCAGCAGGTCGTTAAGGTTTTTATCAACAATTTTGCAAGGAGACACCAAGTTGGCAATAGACCACCAATTTGGCCAGATAATGCCCCTCTCTTTTCTTGGCGAAAAAAGAAAGATAAAATTTGTATTGTTGCTGCAGTTAGGGGAAAATGGTCTAGGATTTATTAAACCATTTTTTTTCTTATCAGTTTATCATTTTACTTTCAATCTTTATTTTTATTTTTCTATTTTGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000209 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005815 GO:0005829 GO:0005856 GO:0006275 GO:0006325 GO:0006464 GO:0006479 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009635 GO:0009636 GO:0009651 GO:0009743 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010555 GO:0010556 GO:0015630 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016604 GO:0016607 GO:0016740 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032259 GO:0032446 GO:0032991 GO:0033554 GO:0034969 GO:0034971 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051276 GO:0051603 GO:0051716 GO:0060255 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071840 GO:0072756 GO:0080090 GO:0080134 GO:0097237 GO:0140096 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902882 GO:1902883 GO:1902884 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DWNN zf-CCHC_2

Protein Analysis

738

Amino Acids

81.89

Weight (kDa)

6.4

Isoelectric Point (pI)

45.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DWNN PF08783 3 - 76 2.6e-31 DWNN domain
zf-CCHC_2 PF13696 205 - 225 4.1e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
AasI GACNNNNNNGTC 1 cut(s) 140
Acc36I ACCTGC 2 cut(s) 1360, 1977
AccB7I CCANNNNNTGG 3 cut(s) 719, 1592, 1649
AccI GTMKAC 3 cut(s) 79, 842, 1974
AccIII TCCGGA 1 cut(s) 421
AciI CCGC 3 cut(s) 5, 416, 1724
AclI AACGTT 1 cut(s) 185
AclWI GGATC 2 cut(s) 677, 1725
AcoI YGGCCR 2 cut(s) 541, 2053
AcsI RAATTY 4 cut(s) 17, 381, 1793, 2099
AcuI CTGAAG 3 cut(s) 408, 1244, 1338
AcyI GRCGYC 1 cut(s) 232
AfaI GTAC 6 cut(s) 11, 124, 225, 377, 1087, 1932
AfiI CCNNNNNNNGG 9 cut(s) 533, 617, 677, 719, 1565, 1592, 1613, 1649, 1869
AflII CTTAAG 1 cut(s) 464
AflIII ACRYGT 1 cut(s) 845
AgsI TTSAA 4 cut(s) 101, 296, 1118, 2185
AjiI CACGTC 1 cut(s) 572
AjnI CCWGG 5 cut(s) 226, 526, 646, 1374, 1558
Alw21I GWGCWC 2 cut(s) 1372, 1600
Alw26I GTCTC 3 cut(s) 1229, 1834, 2016
AlwI GGATC 2 cut(s) 677, 1725
AlwNI CAGNNNCTG 2 cut(s) 788, 1402
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 6 cut(s) 541, 797, 1404, 1520, 1846, 2053
ApaI GGGCCC 1 cut(s) 1524
ApeKI GCWGC 9 cut(s) 403, 809, 1137, 1175, 1393, 1493, 1980, 1983, 2113
ApoI RAATTY 4 cut(s) 17, 381, 1793, 2099
ArsI GACNNNNNNTTYG 4 cut(s) 1628, 1660, 2033, 2065
AspS9I GGNCC 8 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1766, 1846
AsuHPI GGTGA 5 cut(s) 136, 380, 692, 869, 1907
AvaII GGWCC 5 cut(s) 59, 524, 1628, 1652, 1766
BaeGI GKGCMC 1 cut(s) 1524
BalI TGGCCA 1 cut(s) 2055
BanII GRGCYC 1 cut(s) 1524
BbsI GAAGAC 2 cut(s) 1232, 1481
Bbv12I GWGCWC 2 cut(s) 1372, 1600
BbvI GCAGC 9 cut(s) 415, 796, 1124, 1162, 1405, 1505, 1992, 1995, 2100
BccI CCATC 6 cut(s) 442, 749, 1061, 1568, 1892, 1962
BceAI ACGGC 3 cut(s) 204, 528, 532
BciT130I CCWGG 5 cut(s) 228, 528, 648, 1376, 1560
BciVI GTATCC 1 cut(s) 1042
BcoDI GTCTC 3 cut(s) 1229, 1834, 2016
BfaI CTAG 3 cut(s) 309, 1625, 2135
BfmI CTRYAG 2 cut(s) 1978, 2114
BfrI CTTAAG 1 cut(s) 464
BfuAI ACCTGC 2 cut(s) 1360, 1977
BfuI GTATCC 1 cut(s) 1042
BisI GCNGC 9 cut(s) 404, 810, 1138, 1176, 1394, 1494, 1981, 1984, 2114
BlsI GCNGC 9 cut(s) 405, 811, 1139, 1177, 1395, 1495, 1982, 1985, 2115
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 5 cut(s) 228, 528, 648, 1376, 1560
Bme18I GGWCC 5 cut(s) 59, 524, 1628, 1652, 1766
BmgBI CACGTC 1 cut(s) 572
BmgT120I GGNCC 8 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1766, 1846
BmiI GGNNCC 7 cut(s) 420, 645, 1350, 1521, 1522, 1704, 1847
BmrFI CCNGG 5 cut(s) 228, 528, 648, 1376, 1560
BmrI ACTGGG 1 cut(s) 361
BmsI GCATC 7 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683
BmuI ACTGGG 1 cut(s) 361
BpiI GAAGAC 2 cut(s) 1232, 1481
BpmI CTGGAG 1 cut(s) 468
Bpu10I CCTNAGC 2 cut(s) 342, 870
BpuEI CTTGAG 1 cut(s) 1467
BsaHI GRCGYC 1 cut(s) 232
BsaI GGTCTC 1 cut(s) 1229
BsaJI CCNNGG 3 cut(s) 544, 1360, 1374
BsaWI WCCGGW 2 cut(s) 421, 1663
BsaXI ACNNNNNCTCC 4 cut(s) 550, 580, 1813, 1843
Bsc4I CCNNNNNNNGG 9 cut(s) 533, 617, 677, 719, 1565, 1592, 1613, 1649, 1869
Bse1I ACTGG 6 cut(s) 356, 398, 485, 500, 724, 1547
Bse3DI GCAATG 1 cut(s) 1475
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 5 cut(s) 228, 528, 648, 1376, 1560
BseDI CCNNGG 3 cut(s) 544, 1360, 1374
BseGI GGATG 4 cut(s) 361, 1355, 1579, 1891
BseLI CCNNNNNNNGG 9 cut(s) 533, 617, 677, 719, 1565, 1592, 1613, 1649, 1869
BseMI GCAATG 1 cut(s) 1475
BseMII CTCAG 6 cut(s) 84, 219, 333, 861, 1057, 1724
BseNI ACTGG 6 cut(s) 356, 398, 485, 500, 724, 1547
BseRI GAGGAG 2 cut(s) 1761, 1834
BseSI GKGCMC 1 cut(s) 1524
BseXI GCAGC 9 cut(s) 415, 796, 1124, 1162, 1405, 1505, 1992, 1995, 2100
BseYI CCCAGC 1 cut(s) 1097
BsgI GTGCAG 4 cut(s) 422, 801, 1116, 1412
BshFI GGCC 6 cut(s) 543, 799, 1406, 1522, 1848, 2055
BsiHKAI GWGCWC 2 cut(s) 1372, 1600
BsiSI CCGG 2 cut(s) 422, 1664
BslI CCNNNNNNNGG 9 cut(s) 533, 617, 677, 719, 1565, 1592, 1613, 1649, 1869
BsmAI GTCTC 3 cut(s) 1229, 1834, 2016
BsmBI CGTCTC 1 cut(s) 1834
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 6 cut(s) 543, 799, 1406, 1522, 1848, 2055
Bso31I GGTCTC 1 cut(s) 1229
Bsp120I GGGCCC 1 cut(s) 1520
Bsp1286I GDGCHC 3 cut(s) 1372, 1524, 1600
Bsp13I TCCGGA 1 cut(s) 421
Bsp143I GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
BspACI CCGC 3 cut(s) 5, 416, 1724
BspANI GGCC 6 cut(s) 543, 799, 1406, 1522, 1848, 2055
BspCNI CTCAG 6 cut(s) 83, 218, 334, 862, 1056, 1723
BspEI TCCGGA 1 cut(s) 421
BspHI TCATGA 1 cut(s) 1779
BspLI GGNNCC 7 cut(s) 420, 645, 1350, 1521, 1522, 1704, 1847
BspMAI CTGCAG 2 cut(s) 1982, 2118
BspMI ACCTGC 2 cut(s) 1360, 1977
BspPI GGATC 2 cut(s) 677, 1725
BspTI CTTAAG 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 1229
BsrDI GCAATG 1 cut(s) 1475
BsrI ACTGG 6 cut(s) 356, 398, 485, 500, 724, 1547
BssECI CCNNGG 3 cut(s) 544, 1360, 1374
BssMI GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
BssNAI GTATAC 2 cut(s) 80, 1975
BssNI GRCGYC 1 cut(s) 232
BssT1I CCWWGG 1 cut(s) 1360
Bst1107I GTATAC 2 cut(s) 80, 1975
Bst2UI CCWGG 5 cut(s) 228, 528, 648, 1376, 1560
Bst4CI ACNGT 4 cut(s) 59, 840, 1082, 1240
Bst6I CTCTTC 2 cut(s) 159, 1964
BstACI GRCGYC 1 cut(s) 232
BstAFI CTTAAG 1 cut(s) 464
BstAPI GCANNNNNTGC 1 cut(s) 930
BstC8I GCNNGC 7 cut(s) 242, 461, 1135, 1404, 1451, 1455, 1553
BstDEI CTNAG 6 cut(s) 70, 205, 342, 870, 1043, 1710
BstDSI CCRYGG 1 cut(s) 544
BstEII GGTNACC 1 cut(s) 142
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 4 cut(s) 361, 1355, 1579, 1891
BstKTI GATC 6 cut(s) 361, 685, 828, 1024, 1720, 1870
BstMAI GTCTC 3 cut(s) 1229, 1834, 2016
BstMBI GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
BstNI CCWGG 5 cut(s) 228, 528, 648, 1376, 1560
BstNSI RCATGY 4 cut(s) 244, 1453, 1555, 1642
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 5 cut(s) 226, 526, 646, 1374, 1558
BstSFI CTRYAG 2 cut(s) 1978, 2114
BstSLI GKGCMC 1 cut(s) 1524
BstV1I GCAGC 9 cut(s) 415, 796, 1124, 1162, 1405, 1505, 1992, 1995, 2100
BstV2I GAAGAC 2 cut(s) 1232, 1481
BstX2I RGATCY 1 cut(s) 1717
BstXI CCANNNNNNTGG 1 cut(s) 2051
BstYI RGATCY 1 cut(s) 1717
BstZ17I GTATAC 2 cut(s) 80, 1975
BsuI GTATCC 1 cut(s) 1042
BsuRI GGCC 6 cut(s) 543, 799, 1406, 1522, 1848, 2055
BtgI CCRYGG 1 cut(s) 544
BtgZI GCGATG 1 cut(s) 1917
BtrI CACGTC 1 cut(s) 572
BtsCI GGATG 4 cut(s) 361, 1355, 1579, 1891
BtsI GCAGTG 3 cut(s) 664, 767, 877
BtsIMutI CAGTG 6 cut(s) 405, 664, 717, 767, 877, 990
BveI ACCTGC 2 cut(s) 1360, 1977
Cac8I GCNNGC 7 cut(s) 242, 461, 1135, 1404, 1451, 1455, 1553
CaiI CAGNNNCTG 2 cut(s) 788, 1402
CciI TCATGA 1 cut(s) 1779
Cfr13I GGNCC 8 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1766, 1846
CseI GACGC 1 cut(s) 240
Csp6I GTAC 6 cut(s) 10, 123, 224, 376, 1086, 1931
CviQI GTAC 6 cut(s) 10, 123, 224, 376, 1086, 1931
DdeI CTNAG 6 cut(s) 70, 205, 342, 870, 1043, 1710
DpnI GATC 6 cut(s) 360, 684, 827, 1023, 1719, 1869
DpnII GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
DrdI GACNNNNNNGTC 1 cut(s) 140
DseDI GACNNNNNNGTC 1 cut(s) 140
EaeI YGGCCR 2 cut(s) 541, 2053
Eam1104I CTCTTC 2 cut(s) 159, 1964
EarI CTCTTC 2 cut(s) 159, 1964
Eco130I CCWWGG 1 cut(s) 1360
Eco24I GRGCYC 1 cut(s) 1524
Eco31I GGTCTC 1 cut(s) 1229
Eco47I GGWCC 5 cut(s) 59, 524, 1628, 1652, 1766
Eco57I CTGAAG 3 cut(s) 408, 1244, 1338
Eco91I GGTNACC 1 cut(s) 142
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 3 cut(s) 1520, 1521, 1628
EcoO65I GGTNACC 1 cut(s) 142
EcoRII CCWGG 5 cut(s) 226, 526, 646, 1374, 1558
EcoT14I CCWWGG 1 cut(s) 1360
EcoT22I ATGCAT 2 cut(s) 1315, 1515
EcoT38I GRGCYC 1 cut(s) 1524
ErhI CCWWGG 1 cut(s) 1360
Esp3I CGTCTC 1 cut(s) 1834
FalI AAGNNNNNCTT 4 cut(s) 156, 188, 917, 949
FauNDI CATATG 3 cut(s) 763, 1515, 1591
FblI GTMKAC 3 cut(s) 79, 842, 1974
Fnu4HI GCNGC 9 cut(s) 404, 810, 1138, 1176, 1394, 1494, 1981, 1984, 2114
FokI GGATG 4 cut(s) 368, 1342, 1586, 1898
FriOI GRGCYC 1 cut(s) 1524
Fsp4HI GCNGC 9 cut(s) 404, 810, 1138, 1176, 1394, 1494, 1981, 1984, 2114
FspBI CTAG 3 cut(s) 309, 1625, 2135
GluI GCNGC 9 cut(s) 404, 810, 1138, 1176, 1394, 1494, 1981, 1984, 2114
GsaI CCCAGC 1 cut(s) 1101
GsuI CTGGAG 1 cut(s) 468
HaeIII GGCC 6 cut(s) 543, 799, 1406, 1522, 1848, 2055
HapII CCGG 2 cut(s) 422, 1664
HgaI GACGC 1 cut(s) 240
Hin1I GRCGYC 1 cut(s) 232
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 1 cut(s) 461
HpaII CCGG 2 cut(s) 422, 1664
HphI GGTGA 5 cut(s) 136, 380, 692, 869, 1907
Hpy166II GTNNAC 8 cut(s) 10, 80, 224, 514, 569, 836, 843, 1975
Hpy188I TCNGA 6 cut(s) 262, 1224, 1318, 1713, 1766, 1806
Hpy188III TCNNGA 9 cut(s) 173, 341, 386, 422, 961, 1118, 1484, 1780, 1871
Hpy8I GTNNAC 8 cut(s) 10, 80, 224, 514, 569, 836, 843, 1975
HpyAV CCTTC 3 cut(s) 824, 1167, 1875
HpyCH4III ACNGT 4 cut(s) 59, 840, 1082, 1240
HpyCH4IV ACGT 5 cut(s) 185, 571, 847, 974, 1933
HpyF3I CTNAG 6 cut(s) 70, 205, 342, 870, 1043, 1710
HpySE526I ACGT 5 cut(s) 185, 571, 847, 974, 1933
Hsp92I GRCGYC 1 cut(s) 232
Kpn2I TCCGGA 1 cut(s) 421
Kzo9I GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
LmnI GCTCC 3 cut(s) 320, 1375, 1603
Lsp1109I GCAGC 9 cut(s) 415, 796, 1124, 1162, 1405, 1505, 1992, 1995, 2100
LweI GCATC 7 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683
MaeI CTAG 3 cut(s) 309, 1625, 2135
MaeII ACGT 5 cut(s) 185, 571, 847, 974, 1933
MaeIII GTNAC 4 cut(s) 142, 250, 629, 1076
MalI GATC 6 cut(s) 360, 684, 827, 1023, 1719, 1869
MboI GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
MboII GAAGA 9 cut(s) 176, 287, 464, 1226, 1237, 1397, 1450, 1486, 1951
MflI RGATCY 1 cut(s) 1717
MhlI GDGCHC 3 cut(s) 1372, 1524, 1600
MlsI TGGCCA 1 cut(s) 2055
MluCI AATT 9 cut(s) 17, 213, 381, 964, 1793, 1948, 2010, 2048, 2099
MluNI TGGCCA 1 cut(s) 2055
MlyI GAGTC 5 cut(s) 1033, 1079, 1136, 1340, 1661
MmeI TCCRAC 1 cut(s) 1744
Mox20I TGGCCA 1 cut(s) 2055
Mph1103I ATGCAT 2 cut(s) 1315, 1515
MroI TCCGGA 1 cut(s) 421
MscI TGGCCA 1 cut(s) 2055
MseI TTAA 8 cut(s) 21, 212, 465, 473, 917, 936, 1994, 2145
MslI CAYNNNNRTG 1 cut(s) 1568
Msp20I TGGCCA 1 cut(s) 2055
MspA1I CMGCKG 1 cut(s) 1496
MspCI CTTAAG 1 cut(s) 464
MspI CCGG 2 cut(s) 422, 1664
MspR9I CCNGG 5 cut(s) 228, 528, 648, 1376, 1560
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 5 cut(s) 228, 528, 648, 1376, 1560
NdeI CATATG 3 cut(s) 763, 1515, 1591
NdeII GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
NlaIV GGNNCC 7 cut(s) 420, 645, 1350, 1521, 1522, 1704, 1847
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 2 cut(s) 142, 629
NsiI ATGCAT 2 cut(s) 1315, 1515
NspI RCATGY 4 cut(s) 244, 1453, 1555, 1642
PaeI GCATGC 3 cut(s) 244, 1453, 1555
PagI TCATGA 1 cut(s) 1779
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 7 cut(s) 41, 101, 190, 257, 337, 1062, 1153
PflMI CCANNNNNTGG 3 cut(s) 719, 1592, 1649
PkrI GCNGC 9 cut(s) 405, 811, 1139, 1177, 1395, 1495, 1982, 1985, 2115
PleI GAGTC 5 cut(s) 1033, 1078, 1135, 1339, 1661
PpsI GAGTC 5 cut(s) 1033, 1078, 1135, 1339, 1661
PpuMI RGGWCCY 1 cut(s) 1628
PsiI TTATAA 1 cut(s) 1533
Psp1406I AACGTT 1 cut(s) 185
Psp5II RGGWCCY 1 cut(s) 1628
Psp6I CCWGG 5 cut(s) 226, 526, 646, 1374, 1558
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 1 cut(s) 1097
PspGI CCWGG 5 cut(s) 226, 526, 646, 1374, 1558
PspN4I GGNNCC 7 cut(s) 420, 645, 1350, 1521, 1522, 1704, 1847
PspOMI GGGCCC 1 cut(s) 1520
PspPI GGNCC 8 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1766, 1846
PspPPI RGGWCCY 1 cut(s) 1628
PsrI GAACNNNNNNTAC 2 cut(s) 1242, 1274
PstI CTGCAG 2 cut(s) 1982, 2118
PstNI CAGNNNCTG 2 cut(s) 788, 1402
PsuI RGATCY 1 cut(s) 1717
PvuII CAGCTG 1 cut(s) 1496
RsaI GTAC 6 cut(s) 11, 124, 225, 377, 1087, 1932
RsaNI GTAC 6 cut(s) 10, 123, 224, 376, 1086, 1931
RseI CAYNNNNRTG 1 cut(s) 1568
SaqAI TTAA 8 cut(s) 21, 212, 465, 473, 917, 936, 1994, 2145
SatI GCNGC 9 cut(s) 404, 810, 1138, 1176, 1394, 1494, 1981, 1984, 2114
Sau3AI GATC 6 cut(s) 358, 682, 825, 1021, 1717, 1867
Sau96I GGNCC 8 cut(s) 59, 524, 1520, 1521, 1628, 1652, 1766, 1846
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 5 cut(s) 1033, 1079, 1136, 1340, 1661
ScrFI CCNGG 5 cut(s) 228, 528, 648, 1376, 1560
SduI GDGCHC 3 cut(s) 1372, 1524, 1600
SfaNI GCATC 7 cut(s) 898, 1187, 1300, 1322, 1364, 1500, 1683
SfcI CTRYAG 2 cut(s) 1978, 2114
SinI GGWCC 5 cut(s) 59, 524, 1628, 1652, 1766
SmiMI CAYNNNNRTG 1 cut(s) 1568
SmlI CTYRAG 2 cut(s) 464, 1482
SmoI CTYRAG 2 cut(s) 464, 1482
SphI GCATGC 3 cut(s) 244, 1453, 1555
Sse9I AATT 9 cut(s) 17, 213, 381, 964, 1793, 1948, 2010, 2048, 2099
SsiI CCGC 3 cut(s) 5, 416, 1724
SspI AATATT 1 cut(s) 96
SspMI CTAG 3 cut(s) 309, 1625, 2135
StyD4I CCNGG 5 cut(s) 226, 526, 646, 1374, 1558
StyI CCWWGG 1 cut(s) 1360
TaaI ACNGT 4 cut(s) 59, 840, 1082, 1240
TaiI ACGT 5 cut(s) 188, 574, 850, 977, 1936
TaqI TCGA 5 cut(s) 132, 477, 583, 828, 1060
TasI AATT 9 cut(s) 17, 213, 381, 964, 1793, 1948, 2010, 2048, 2099
TatI WGTACW 2 cut(s) 9, 1085
TfiI GAWTC 7 cut(s) 41, 101, 190, 257, 337, 1062, 1153
Tru1I TTAA 8 cut(s) 21, 212, 465, 473, 917, 936, 1994, 2145
Tru9I TTAA 8 cut(s) 21, 212, 465, 473, 917, 936, 1994, 2145
TscAI CASTG 6 cut(s) 405, 671, 724, 774, 884, 990
TseFI GTSAC 2 cut(s) 142, 629
TseI GCWGC 9 cut(s) 403, 809, 1137, 1175, 1393, 1493, 1980, 1983, 2113
Tsp45I GTSAC 2 cut(s) 142, 629
TspRI CASTG 6 cut(s) 405, 671, 724, 774, 884, 990
Van91I CCANNNNNTGG 3 cut(s) 719, 1592, 1649
Vha464I CTTAAG 1 cut(s) 464
VpaK11BI GGWCC 5 cut(s) 59, 524, 1628, 1652, 1766
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 4 cut(s) 17, 381, 1793, 2099
XceI RCATGY 4 cut(s) 244, 1453, 1555, 1642
XcmI CCANNNNNNNNNTGG 1 cut(s) 492
XmiI GTMKAC 3 cut(s) 79, 842, 1974
XspI CTAG 3 cut(s) 309, 1625, 2135
ZrmI AGTACT 1 cut(s) 1087
Zsp2I ATGCAT 2 cut(s) 1315, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.