Rh7BG207500

DWNN domain, A CCHC-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001377
Physical Location & Seq
Reverse (-)
17439130 .. 17445905
6776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG207500.1

Sequence Viewer

Length: 2088 bp
ATGCAGTGTTTTTATAGACTTCCTGTTCTATGTTGTGGAATTTCAGAGTATCTTGATGAAGCAACGTTGATTCCAAAAAATACCTCAGTTTTAATTCGCCGTGTACCTGGACGCCCTCGCATGCCCATTGTTACTGATTCAGAGCATAAAGTAGAAGATATGGTGGAGAACATTGAACCCGAAAGGACTAGCTTTCTGGGAGCTGGTTCCTCTGTGAATCCTGAGCCAGACTGGGATGATCTTGGGGGTGATTTGTACGAAATTCCTGAAGTTTTGCCAGTGCAGCCAAGTTATGCGGTTCCGGATATTCCACCATCAAATAAAGCTGATGAAGATAGCAAGCTTAAGGCTTTAATCGACACTCCAGTATTAGACTGGCAACATCAAGGCGCTGACGGCTATGGTCCTGGTAGAGGTTTTGGCCGTGGTATGAATGGGAGAATGGGTGGACGTGGTTTTGGAGTGTTTGAGAAAAAAACACCTCCACAGGGCTATATATGTCACAGGTGTAAGGTTCCTGGTCATTATATTCAGCACTGCCCTACAAATGGTGATCCAAACTATGACATCAAAAGAGTGAAGCCACCCACTGGCATTCCCAAGTCCATGTTGATAGCAACCCCAGATGGCTCATATGCACTGCCGAGTGGTGCAGTAGCTGTATTGAGGCCGAATGAGGCTGCTTTTGAGAAAGAGATCGAAGGTTTACCGTCTACACGTTCTGTTGGTGATTTACCACCTGAGCTACACTGCCCCTTGTGCAAGGAAGTGATGAAAGATGCTGTTTTAACGAGCAAATGTTGCTTTAAGAGCTTTTGTGATAAGTGTATCAGGAATTACATTACCTCAAAGTCAGTGTGTGTCTGTGGGGCTACAAATACACTTGCAGATGATCTACTGCCAAATAAGACTCTCAGGGATACCATCAATCGAATCTTGGAGTCTGGTAACAGTAGTACTGATAACGCTGGGAGTGCTTTCCAAGTTCAAGATATGGAGTCTGCACGCTGCCCACAACCCAAGATTCCTTCCCCTACTTTATCTGCTGCATCAAAGGGAGAAAATAAGCCTTTACCTTTGCATGAAGAAGCTCTGAAGACACAGGAGACCGTAGATGAGGTAAAACCTGTTCTTGCCCCACAGCAGATGTTAGAGAATGTGAGGAATACAAAATTAGCCGATGCATCTGAAGCTACCCATGAGTCAATGAGTGTAAAGGAACCTGCATCCCAAGGGAGTGCTCCCCTGGTTGATGAAGAAGTGCAGCAGAGGCTGGCCTCTGTGGAGGCAGGAAAGAAAAGGAAAAAGAAGAAAGTTCGCATGCCTGCAAACGAAATGCAATGGAAGACACCTCAAGACCTTGCAGCTGAAAACTACATGATGCATATGGGGCCCTCTGCTTATAATCCATACTGGAATGGCATGCAACCTGGCATGGGCATGGATGGATATATGCCACCATATGGTGCTCCTATGCCGTATATGGGGTATGGACTAGGTCCTATGGACATGCCATTTGGGGGTCCTTTCCCACCGGACTCATTTGGTGGTCAAGGTTATATGATGCCTATGGTTCCACCTCAGAGGGATCTCGCGGACTTTGGTATGGGTATGGGAATGAATGGAATGAATGTCGGACCTCCTCCTATCATGAGCAGAGAGGAATTTGAGGCTCGGAAAGCTGATTTGAGGAGGAAGCGTGAAAATGAGAGACGGGGCCAAAGGGAGTTCTCCAAAGATCGGGAATATGGAAGGGATGTGAGTGGTGATGGCGATGTGCCTCCAATGAAGTCCAAATCAGTACGTCTTTATTGTGCCAATTTCCATCTCTTCTTATCATTTGTATACTGCAGCAGCAGGTCGTTAAGGTTTTTATCAACAATTTTGCAAGGAGACACCAAGTTGGCAATAGACCACCAATTTGGCCAGATAATGCCCCTCTCTTTTCTTGGCGAAAAAAGAAAGATAAAATTTGTATTGTTGCTGCAGTTGGGGGAAAATGGTCTAGGATTTATTAAACCATTTTTTTTCTTATCAGTTTATCATTTTACTTTCAATCTTTATTTTTATTTTTCTATTTTGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000209 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005815 GO:0005829 GO:0005856 GO:0006275 GO:0006325 GO:0006464 GO:0006479 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009635 GO:0009636 GO:0009651 GO:0009743 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010555 GO:0010556 GO:0015630 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016604 GO:0016607 GO:0016740 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032259 GO:0032446 GO:0032991 GO:0033554 GO:0034969 GO:0034971 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051276 GO:0051603 GO:0051716 GO:0060255 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071840 GO:0072756 GO:0080090 GO:0080134 GO:0097237 GO:0140096 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902882 GO:1902883 GO:1902884 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DWNN zf-CCHC_2

Protein Analysis

695

Amino Acids

77.08

Weight (kDa)

6.5

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_2 PF13696 162 - 182 3.8e-09 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1404
Acc36I ACCTGC 2 cut(s) 1231, 1848
AccB7I CCANNNNNTGG 2 cut(s) 590, 1463
AccI GTMKAC 2 cut(s) 713, 1845
AccII CGCG 1 cut(s) 1595
AccIII TCCGGA 1 cut(s) 301
AciI CCGC 2 cut(s) 296, 1595
AclI AACGTT 1 cut(s) 65
AclWI GGATC 2 cut(s) 548, 1596
AcoI YGGCCR 2 cut(s) 421, 1924
AcsI RAATTY 4 cut(s) 39, 261, 1664, 1970
AcuI CTGAAG 3 cut(s) 288, 1115, 1209
AcyI GRCGYC 1 cut(s) 112
AfaI GTAC 4 cut(s) 105, 257, 958, 1803
AfiI CCNNNNNNNGG 9 cut(s) 413, 488, 548, 590, 1436, 1463, 1484, 1520, 1740
AflII CTTAAG 1 cut(s) 344
AflIII ACRYGT 1 cut(s) 716
AgsI TTSAA 3 cut(s) 176, 989, 2056
AjiI CACGTC 1 cut(s) 452
AjnI CCWGG 5 cut(s) 106, 406, 517, 1245, 1429
Alw21I GWGCWC 2 cut(s) 1243, 1471
Alw26I GTCTC 3 cut(s) 1100, 1705, 1887
AlwI GGATC 2 cut(s) 548, 1596
AlwNI CAGNNNCTG 2 cut(s) 659, 1273
Aor13HI TCCGGA 1 cut(s) 301
AoxI GGCC 6 cut(s) 421, 668, 1275, 1391, 1717, 1924
ApaI GGGCCC 1 cut(s) 1395
ApeKI GCWGC 9 cut(s) 283, 680, 1008, 1046, 1264, 1364, 1851, 1854, 1984
ApoI RAATTY 4 cut(s) 39, 261, 1664, 1970
ArsI GACNNNNNNTTYG 4 cut(s) 1499, 1531, 1904, 1936
AspLEI GCGC 1 cut(s) 392
AspS9I GGNCC 7 cut(s) 404, 1391, 1392, 1499, 1523, 1637, 1717
AsuHPI GGTGA 4 cut(s) 260, 563, 740, 1778
AvaII GGWCC 4 cut(s) 404, 1499, 1523, 1637
BaeGI GKGCMC 1 cut(s) 1395
BalI TGGCCA 1 cut(s) 1926
BanII GRGCYC 1 cut(s) 1395
BbsI GAAGAC 2 cut(s) 1103, 1352
Bbv12I GWGCWC 2 cut(s) 1243, 1471
BbvI GCAGC 9 cut(s) 295, 667, 995, 1033, 1276, 1376, 1863, 1866, 1971
BccI CCATC 6 cut(s) 322, 620, 932, 1439, 1763, 1833
BceAI ACGGC 4 cut(s) 84, 408, 412, 1462
BciT130I CCWGG 5 cut(s) 108, 408, 519, 1247, 1431
BciVI GTATCC 1 cut(s) 913
BcoDI GTCTC 3 cut(s) 1100, 1705, 1887
BfaI CTAG 3 cut(s) 189, 1496, 2006
BfmI CTRYAG 2 cut(s) 1849, 1985
BfoI RGCGCY 1 cut(s) 393
BfrI CTTAAG 1 cut(s) 344
BfuAI ACCTGC 2 cut(s) 1231, 1848
BfuI GTATCC 1 cut(s) 913
BisI GCNGC 9 cut(s) 284, 681, 1009, 1047, 1265, 1365, 1852, 1855, 1985
BlsI GCNGC 9 cut(s) 285, 682, 1010, 1048, 1266, 1366, 1853, 1856, 1986
BmcAI AGTACT 1 cut(s) 958
Bme1390I CCNGG 5 cut(s) 108, 408, 519, 1247, 1431
Bme18I GGWCC 4 cut(s) 404, 1499, 1523, 1637
BmgBI CACGTC 1 cut(s) 452
BmgT120I GGNCC 7 cut(s) 404, 1391, 1392, 1499, 1523, 1637, 1717
BmiI GGNNCC 9 cut(s) 208, 300, 516, 1221, 1392, 1393, 1524, 1575, 1718
BmrFI CCNGG 5 cut(s) 108, 408, 519, 1247, 1431
BmrI ACTGGG 1 cut(s) 241
BmsI GCATC 7 cut(s) 769, 1058, 1171, 1193, 1235, 1371, 1554
BmuI ACTGGG 1 cut(s) 241
BpiI GAAGAC 2 cut(s) 1103, 1352
BpmI CTGGAG 1 cut(s) 348
Bpu10I CCTNAGC 2 cut(s) 222, 741
BpuEI CTTGAG 1 cut(s) 1338
BsaHI GRCGYC 1 cut(s) 112
BsaI GGTCTC 1 cut(s) 1100
BsaJI CCNNGG 3 cut(s) 424, 1231, 1245
BsaWI WCCGGW 2 cut(s) 301, 1534
BsaXI ACNNNNNCTCC 4 cut(s) 430, 460, 1684, 1714
Bsc4I CCNNNNNNNGG 9 cut(s) 413, 488, 548, 590, 1436, 1463, 1484, 1520, 1740
Bse1I ACTGG 6 cut(s) 236, 278, 365, 380, 595, 1418
Bse3DI GCAATG 1 cut(s) 1346
BseAI TCCGGA 1 cut(s) 301
BseBI CCWGG 5 cut(s) 108, 408, 519, 1247, 1431
BseDI CCNNGG 3 cut(s) 424, 1231, 1245
BseGI GGATG 4 cut(s) 241, 1226, 1450, 1762
BseLI CCNNNNNNNGG 9 cut(s) 413, 488, 548, 590, 1436, 1463, 1484, 1520, 1740
BseMI GCAATG 1 cut(s) 1346
BseMII CTCAG 5 cut(s) 99, 213, 732, 928, 1595
BseNI ACTGG 6 cut(s) 236, 278, 365, 380, 595, 1418
BseRI GAGGAG 2 cut(s) 1632, 1705
BseSI GKGCMC 1 cut(s) 1395
BseXI GCAGC 9 cut(s) 295, 667, 995, 1033, 1276, 1376, 1863, 1866, 1971
BseYI CCCAGC 1 cut(s) 968
BsgI GTGCAG 4 cut(s) 302, 672, 987, 1283
Bsh1236I CGCG 1 cut(s) 1595
BshFI GGCC 6 cut(s) 423, 670, 1277, 1393, 1719, 1926
BsiHKAI GWGCWC 2 cut(s) 1243, 1471
BsiSI CCGG 2 cut(s) 302, 1535
BslI CCNNNNNNNGG 9 cut(s) 413, 488, 548, 590, 1436, 1463, 1484, 1520, 1740
BsmAI GTCTC 3 cut(s) 1100, 1705, 1887
BsmBI CGTCTC 1 cut(s) 1705
BsmI GAATGC 1 cut(s) 594
BsnI GGCC 6 cut(s) 423, 670, 1277, 1393, 1719, 1926
Bso31I GGTCTC 1 cut(s) 1100
Bsp120I GGGCCC 1 cut(s) 1391
Bsp1286I GDGCHC 3 cut(s) 1243, 1395, 1471
Bsp13I TCCGGA 1 cut(s) 301
Bsp143I GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
BspACI CCGC 2 cut(s) 296, 1595
BspANI GGCC 6 cut(s) 423, 670, 1277, 1393, 1719, 1926
BspCNI CTCAG 5 cut(s) 98, 214, 733, 927, 1594
BspEI TCCGGA 1 cut(s) 301
BspFNI CGCG 1 cut(s) 1595
BspHI TCATGA 1 cut(s) 1650
BspLI GGNNCC 9 cut(s) 208, 300, 516, 1221, 1392, 1393, 1524, 1575, 1718
BspMAI CTGCAG 2 cut(s) 1853, 1989
BspMI ACCTGC 2 cut(s) 1231, 1848
BspPI GGATC 2 cut(s) 548, 1596
BspTI CTTAAG 1 cut(s) 344
BspTNI GGTCTC 1 cut(s) 1100
BsrDI GCAATG 1 cut(s) 1346
BsrI ACTGG 6 cut(s) 236, 278, 365, 380, 595, 1418
BssECI CCNNGG 3 cut(s) 424, 1231, 1245
BssMI GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
BssNAI GTATAC 1 cut(s) 1846
BssNI GRCGYC 1 cut(s) 112
BssT1I CCWWGG 1 cut(s) 1231
Bst1107I GTATAC 1 cut(s) 1846
Bst2UI CCWGG 5 cut(s) 108, 408, 519, 1247, 1431
Bst4CI ACNGT 3 cut(s) 711, 953, 1111
Bst6I CTCTTC 1 cut(s) 1835
BstACI GRCGYC 1 cut(s) 112
BstAFI CTTAAG 1 cut(s) 344
BstAPI GCANNNNNTGC 1 cut(s) 801
BstC8I GCNNGC 7 cut(s) 122, 341, 1006, 1275, 1322, 1326, 1424
BstDEI CTNAG 5 cut(s) 85, 222, 741, 914, 1581
BstDSI CCRYGG 1 cut(s) 424
BstENI CCTNNNNNAGG 1 cut(s) 411
BstF5I GGATG 4 cut(s) 241, 1226, 1450, 1762
BstFNI CGCG 1 cut(s) 1595
BstH2I RGCGCY 1 cut(s) 393
BstHHI GCGC 1 cut(s) 392
BstKTI GATC 6 cut(s) 241, 556, 699, 895, 1591, 1741
BstMAI GTCTC 3 cut(s) 1100, 1705, 1887
BstMBI GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
BstNI CCWGG 5 cut(s) 108, 408, 519, 1247, 1431
BstNSI RCATGY 4 cut(s) 124, 1324, 1426, 1513
BstSCI CCNGG 5 cut(s) 106, 406, 517, 1245, 1429
BstSFI CTRYAG 2 cut(s) 1849, 1985
BstSLI GKGCMC 1 cut(s) 1395
BstUI CGCG 1 cut(s) 1595
BstV1I GCAGC 9 cut(s) 295, 667, 995, 1033, 1276, 1376, 1863, 1866, 1971
BstV2I GAAGAC 2 cut(s) 1103, 1352
BstX2I RGATCY 1 cut(s) 1588
BstXI CCANNNNNNTGG 1 cut(s) 1922
BstYI RGATCY 1 cut(s) 1588
BstZ17I GTATAC 1 cut(s) 1846
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 6 cut(s) 423, 670, 1277, 1393, 1719, 1926
BtgI CCRYGG 1 cut(s) 424
BtgZI GCGATG 1 cut(s) 1788
BtrI CACGTC 1 cut(s) 452
BtsCI GGATG 4 cut(s) 241, 1226, 1450, 1762
BtsI GCAGTG 4 cut(s) 11, 535, 638, 748
BtsIMutI CAGTG 7 cut(s) 11, 285, 535, 588, 638, 748, 861
BveI ACCTGC 2 cut(s) 1231, 1848
Cac8I GCNNGC 7 cut(s) 122, 341, 1006, 1275, 1322, 1326, 1424
CaiI CAGNNNCTG 2 cut(s) 659, 1273
CciI TCATGA 1 cut(s) 1650
CfoI GCGC 1 cut(s) 392
Cfr13I GGNCC 7 cut(s) 404, 1391, 1392, 1499, 1523, 1637, 1717
CseI GACGC 1 cut(s) 120
Csp6I GTAC 4 cut(s) 104, 256, 957, 1802
CviQI GTAC 4 cut(s) 104, 256, 957, 1802
DdeI CTNAG 5 cut(s) 85, 222, 741, 914, 1581
DpnI GATC 6 cut(s) 240, 555, 698, 894, 1590, 1740
DpnII GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
EaeI YGGCCR 2 cut(s) 421, 1924
Eam1104I CTCTTC 1 cut(s) 1835
EarI CTCTTC 1 cut(s) 1835
Eco130I CCWWGG 1 cut(s) 1231
Eco24I GRGCYC 1 cut(s) 1395
Eco31I GGTCTC 1 cut(s) 1100
Eco47I GGWCC 4 cut(s) 404, 1499, 1523, 1637
Eco57I CTGAAG 3 cut(s) 288, 1115, 1209
EcoNI CCTNNNNNAGG 1 cut(s) 411
EcoO109I RGGNCCY 4 cut(s) 1391, 1392, 1499, 1523
EcoRII CCWGG 5 cut(s) 106, 406, 517, 1245, 1429
EcoT14I CCWWGG 1 cut(s) 1231
EcoT22I ATGCAT 2 cut(s) 1186, 1386
EcoT38I GRGCYC 1 cut(s) 1395
ErhI CCWWGG 1 cut(s) 1231
Esp3I CGTCTC 1 cut(s) 1705
FauNDI CATATG 3 cut(s) 634, 1386, 1462
FblI GTMKAC 2 cut(s) 713, 1845
Fnu4HI GCNGC 9 cut(s) 284, 681, 1009, 1047, 1265, 1365, 1852, 1855, 1985
FokI GGATG 4 cut(s) 248, 1213, 1457, 1769
FriOI GRGCYC 1 cut(s) 1395
Fsp4HI GCNGC 9 cut(s) 284, 681, 1009, 1047, 1265, 1365, 1852, 1855, 1985
FspBI CTAG 3 cut(s) 189, 1496, 2006
GlaI GCGC 1 cut(s) 391
GluI GCNGC 9 cut(s) 284, 681, 1009, 1047, 1265, 1365, 1852, 1855, 1985
GsaI CCCAGC 1 cut(s) 972
GsuI CTGGAG 1 cut(s) 348
HaeII RGCGCY 1 cut(s) 393
HaeIII GGCC 6 cut(s) 423, 670, 1277, 1393, 1719, 1926
HapII CCGG 2 cut(s) 302, 1535
HgaI GACGC 1 cut(s) 120
HhaI GCGC 1 cut(s) 392
Hin1I GRCGYC 1 cut(s) 112
Hin6I GCGC 1 cut(s) 390
HinP1I GCGC 1 cut(s) 390
HindIII AAGCTT 1 cut(s) 341
HpaII CCGG 2 cut(s) 302, 1535
HphI GGTGA 4 cut(s) 260, 563, 740, 1778
Hpy166II GTNNAC 5 cut(s) 104, 449, 707, 714, 1846
Hpy188I TCNGA 7 cut(s) 46, 142, 1095, 1189, 1584, 1637, 1677
Hpy188III TCNNGA 9 cut(s) 53, 221, 266, 302, 832, 989, 1355, 1651, 1742
Hpy8I GTNNAC 5 cut(s) 104, 449, 707, 714, 1846
HpyAV CCTTC 3 cut(s) 695, 1038, 1746
HpyCH4III ACNGT 3 cut(s) 711, 953, 1111
HpyCH4IV ACGT 4 cut(s) 65, 451, 718, 1804
HpyF3I CTNAG 5 cut(s) 85, 222, 741, 914, 1581
HpySE526I ACGT 4 cut(s) 65, 451, 718, 1804
Hsp92I GRCGYC 1 cut(s) 112
HspAI GCGC 1 cut(s) 390
Kpn2I TCCGGA 1 cut(s) 301
Kzo9I GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
LmnI GCTCC 3 cut(s) 200, 1246, 1474
Lsp1109I GCAGC 9 cut(s) 295, 667, 995, 1033, 1276, 1376, 1863, 1866, 1971
LweI GCATC 7 cut(s) 769, 1058, 1171, 1193, 1235, 1371, 1554
MaeI CTAG 3 cut(s) 189, 1496, 2006
MaeII ACGT 4 cut(s) 65, 451, 718, 1804
MaeIII GTNAC 3 cut(s) 130, 500, 947
MalI GATC 6 cut(s) 240, 555, 698, 894, 1590, 1740
MboI GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
MboII GAAGA 8 cut(s) 167, 344, 1097, 1108, 1268, 1321, 1357, 1822
MflI RGATCY 1 cut(s) 1588
MhlI GDGCHC 3 cut(s) 1243, 1395, 1471
MlsI TGGCCA 1 cut(s) 1926
MluNI TGGCCA 1 cut(s) 1926
MlyI GAGTC 5 cut(s) 904, 950, 1007, 1211, 1532
MmeI TCCRAC 1 cut(s) 1615
Mox20I TGGCCA 1 cut(s) 1926
Mph1103I ATGCAT 2 cut(s) 1186, 1386
MroI TCCGGA 1 cut(s) 301
MscI TGGCCA 1 cut(s) 1926
MseI TTAA 7 cut(s) 92, 345, 353, 788, 807, 1865, 2016
MslI CAYNNNNRTG 1 cut(s) 1439
Msp20I TGGCCA 1 cut(s) 1926
MspA1I CMGCKG 1 cut(s) 1367
MspCI CTTAAG 1 cut(s) 344
MspI CCGG 2 cut(s) 302, 1535
MspR9I CCNGG 5 cut(s) 108, 408, 519, 1247, 1431
Mva1269I GAATGC 1 cut(s) 594
MvaI CCWGG 5 cut(s) 108, 408, 519, 1247, 1431
MvnI CGCG 1 cut(s) 1595
NdeI CATATG 3 cut(s) 634, 1386, 1462
NdeII GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
NlaIV GGNNCC 9 cut(s) 208, 300, 516, 1221, 1392, 1393, 1524, 1575, 1718
NmeAIII GCCGAG 1 cut(s) 669
NmuCI GTSAC 1 cut(s) 500
NsiI ATGCAT 2 cut(s) 1186, 1386
NspI RCATGY 4 cut(s) 124, 1324, 1426, 1513
PaeI GCATGC 3 cut(s) 124, 1324, 1426
PagI TCATGA 1 cut(s) 1650
PctI GAATGC 1 cut(s) 594
PfeI GAWTC 5 cut(s) 70, 137, 217, 933, 1024
PflFI GACNNNGTC 1 cut(s) 1497
PflMI CCANNNNNTGG 2 cut(s) 590, 1463
PkrI GCNGC 9 cut(s) 285, 682, 1010, 1048, 1266, 1366, 1853, 1856, 1986
PleI GAGTC 5 cut(s) 904, 949, 1006, 1210, 1532
PpsI GAGTC 5 cut(s) 904, 949, 1006, 1210, 1532
PpuMI RGGWCCY 2 cut(s) 1499, 1523
PsiI TTATAA 1 cut(s) 1404
Psp1406I AACGTT 1 cut(s) 65
Psp5II RGGWCCY 2 cut(s) 1499, 1523
Psp6I CCWGG 5 cut(s) 106, 406, 517, 1245, 1429
PspFI CCCAGC 1 cut(s) 968
PspGI CCWGG 5 cut(s) 106, 406, 517, 1245, 1429
PspN4I GGNNCC 9 cut(s) 208, 300, 516, 1221, 1392, 1393, 1524, 1575, 1718
PspOMI GGGCCC 1 cut(s) 1391
PspPI GGNCC 7 cut(s) 404, 1391, 1392, 1499, 1523, 1637, 1717
PspPPI RGGWCCY 2 cut(s) 1499, 1523
PsrI GAACNNNNNNTAC 2 cut(s) 1113, 1145
PstI CTGCAG 2 cut(s) 1853, 1989
PstNI CAGNNNCTG 2 cut(s) 659, 1273
PsuI RGATCY 1 cut(s) 1588
PsyI GACNNNGTC 1 cut(s) 1497
PvuII CAGCTG 1 cut(s) 1367
RsaI GTAC 4 cut(s) 105, 257, 958, 1803
RsaNI GTAC 4 cut(s) 104, 256, 957, 1802
RseI CAYNNNNRTG 1 cut(s) 1439
SaqAI TTAA 7 cut(s) 92, 345, 353, 788, 807, 1865, 2016
SatI GCNGC 9 cut(s) 284, 681, 1009, 1047, 1265, 1365, 1852, 1855, 1985
Sau3AI GATC 6 cut(s) 238, 553, 696, 892, 1588, 1738
Sau96I GGNCC 7 cut(s) 404, 1391, 1392, 1499, 1523, 1637, 1717
ScaI AGTACT 1 cut(s) 958
SchI GAGTC 5 cut(s) 904, 950, 1007, 1211, 1532
ScrFI CCNGG 5 cut(s) 108, 408, 519, 1247, 1431
SduI GDGCHC 3 cut(s) 1243, 1395, 1471
SfaNI GCATC 7 cut(s) 769, 1058, 1171, 1193, 1235, 1371, 1554
SfcI CTRYAG 2 cut(s) 1849, 1985
SinI GGWCC 4 cut(s) 404, 1499, 1523, 1637
SmiMI CAYNNNNRTG 1 cut(s) 1439
SmlI CTYRAG 2 cut(s) 344, 1353
SmoI CTYRAG 2 cut(s) 344, 1353
SphI GCATGC 3 cut(s) 124, 1324, 1426
SsiI CCGC 2 cut(s) 296, 1595
SspMI CTAG 3 cut(s) 189, 1496, 2006
StyD4I CCNGG 5 cut(s) 106, 406, 517, 1245, 1429
StyI CCWWGG 1 cut(s) 1231
TaaI ACNGT 3 cut(s) 711, 953, 1111
TaiI ACGT 4 cut(s) 68, 454, 721, 1807
TaqI TCGA 3 cut(s) 357, 699, 931
TatI WGTACW 1 cut(s) 956
TfiI GAWTC 5 cut(s) 70, 137, 217, 933, 1024
Tru1I TTAA 7 cut(s) 92, 345, 353, 788, 807, 1865, 2016
Tru9I TTAA 7 cut(s) 92, 345, 353, 788, 807, 1865, 2016
TscAI CASTG 6 cut(s) 285, 542, 595, 645, 755, 861
TseFI GTSAC 1 cut(s) 500
TseI GCWGC 9 cut(s) 283, 680, 1008, 1046, 1264, 1364, 1851, 1854, 1984
Tsp45I GTSAC 1 cut(s) 500
TspDTI ATGAA 9 cut(s) 72, 345, 446, 788, 1098, 1269, 1634, 1643, 1802
TspRI CASTG 6 cut(s) 285, 542, 595, 645, 755, 861
Tth111I GACNNNGTC 1 cut(s) 1497
Van91I CCANNNNNTGG 2 cut(s) 590, 1463
Vha464I CTTAAG 1 cut(s) 344
VpaK11BI GGWCC 4 cut(s) 404, 1499, 1523, 1637
XagI CCTNNNNNAGG 1 cut(s) 411
XapI RAATTY 4 cut(s) 39, 261, 1664, 1970
XceI RCATGY 4 cut(s) 124, 1324, 1426, 1513
XcmI CCANNNNNNNNNTGG 1 cut(s) 372
XmiI GTMKAC 2 cut(s) 713, 1845
XspI CTAG 3 cut(s) 189, 1496, 2006
ZrmI AGTACT 1 cut(s) 958
Zsp2I ATGCAT 2 cut(s) 1186, 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.