Prupe.5G066400_v2.0.a1

DWNN domain, A CCHC-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001377
Physical Location & Seq
Reverse (-)
8101320 .. 8109149
7830 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G066400.1

Sequence Viewer

Length: 2838 bp
ATGGCGGTGTATTATAAATTTAAGAGTGCAAGAGATTATGATTCAATTGCTATGGACGGTCCTTTCATCTCAGTTGGTATTTTGAAAGAAAAAATATTTGAATCCAAGCACTTAGGGAGGGGTACTGATTTCGACCTTGTGGTCACCAACGCCCAGACCAATGAAGAGTATCTTGATGAAGCAATGTTGATTCCAAAAAATACGTCAGTTTTAATTCGACGCGTACCTGGACGGCCTCGCATGCCAATTGTTACTGATTCAGAGCCAAAGGTGGAAGATAAGGTGGAATATACTGAACCAGAAAGGACTAGCTTTCTGACAGCTGATTCATCTGCCATGAAATATCCTGATGAGTCAGATTGGGATGATCTTGGAGGTGATTTGTATGAAATTCCTGAAGTCTTGCCAGTGCAGACAAGTTATCAGGCTCCGGATGTTCAGCCAACAAATAAAGCCGATGAAGATAGCAAGATTAAGGCTTTAATCGACACTCCAGCCTTGGACTGGCAACAGCAAGGTCCTGATGGCTTTGGTCCTGGTAGAGGTTTTGGCAGGGGTATGGGTGGAAGAATGATGGGTGGACGTGGTTTTGGTCGAGGAGGAGGGGGGTTGGAGAGGAAAACACCTCCACAGGGCTATATTTGTCACAGGTGTAAGGTTCCTGGGCATTTTATTCAGCACTGCCCTACAAATGGTGATCCAACTTTTGACATAAAAAGAGTGAAGCCACCCACTGGCATTCCCAAGTCCATGCTGATGGCAACCCCAGATGGCTCATATGCATTGCCAAGTGGTGCAGTAGCTGTTTTGAGGCCAAATGAGGCTGCTTTCGAGAGAGAGATTGAAGGTTTACCATCTACACGGTCTGTTGGTGATCTACCCCCTGAGCTACACTGCCCGTTGTGCAAGGAAGTAATGAAAGATGCTGTGTTAACGAGCAAGTGTTGCTTTAAGAGCTTTTGTGATAAGTGTATCCGGAACTACATTATGTCCAAGTCAGTGTGTGTCTGTGGGGCTACAAATACACTGGCAGACGATCTACTGCCAAATAAGACACTCAGGGATACAATCAATCGAATCTTGGAATCTGGGGGTAACAGTAGTGCTGATAATGCTGGGAGTACTTTCCAAGTTCAAGATATGGAGTCTGCACGCTGTCCACAACCCAAGATTCCTTCTCCAACTCAATCTGCTGCATCAAGGGGAGAAGAACTACAGCTATCTTTGAATAAAGAAACCCCGAAGATACAGGAAACCGCAGATGAGGTAAAGCCTGTTGTTGCCCCACAGCAGATTTTAGAGAAAGTGAGGAATACAAAAGTGGCTGATGTATCTGAAGCTACACATGAGTCAATGAGTATGAAGGAACCAGCATCGCAAGGGAGTGCTCCACTTGTTGAGGAGGAAGTGCAACAAAGGCTGGCTTCTGGGGAGGCAGGAAAGAAAAGGAAAAAGAAGAAAGTTCGCATGCCTGCGAATGACATGCAATGGAGAACCTCGCAAGATCTTGCAGCTGATAACTATATGATGCCTATGGGCCCCGGTGCTTATAATCCATACTGGAATGGCATGCAACCTGGCATGGGTATGGAAGGATATATGGCACCATATGGTGGTCCTATGCCATATATGGGTTATGGACTAGGCCCATTGGACATGCCATTTGGGGGTTTTGGTCCACAGGACTCATTCGGTGCTCAAGGTTATATGATGCCCATGGTTCCGCCTCAGAGGGATTTGGCTGACTTTGGCATGGGCATGAATGGCATGAATGGCATGAATGGAATGAATGGCATGAATGGCATGAATGGAATGAATGGCATGAATGGCATGAATGGCATGAATGGCATGAATGGCATGAATGGCATGAATGGCATGAATGTTGGACCCCCTGTCATGAGCAGAGAGGAATTTGAGGCTCGAAAAGCTGATTTGAGGCGAAAGCGTGAAAATGAGAGACGAGGCCAAACTAGGGAATTCTCCAAAGATCGGGAATACGGGAGGGAGGTGAGCAGCGGTGGCGGCGATGGTGCTTCTATGAAATCCAAATCTAAGTCAATTGCTCGATCACCAAGTCCCGACTACAGCAACAGCCACCAGCATCGTCACAGACGCGAGAGGTCATCTCCAGAACGAAGGCCCTCACGTGACCCACGTGACCTGGAGCCACAGCCACCGCGTCCTCCCAAGAGAAAATCAGACCACCACGACAGAGATCGCGAACGCGCCCAAGACCGAGATCGAGGTCGAGACTATGACGATTACCACGACCACCATGAGGATGATCAGCAGCAGCGCCAGAAACGACATCGTTCTGATTCGTCTTCTGCAAAACCACCACCTTCCACTGAAACAACAACAGCATCGGCCAAACCTGCCTCCTCCTCTTCTACGGCATCAGCTGCAGCAGCTGCCGCAGCGGCGGCGGCGGCGGAGCGCAAGCACAAGGCAAGCGTGTTTTCTCGCATAAGCTTTCCGGAGGGGGAAGTGAGCAAGAAGCGGGCTCGCGCTGCTTCTCCGTCGGCGACGGAGGATAACAAGCCGTCGTCGGCGCATCATCACAAGGAGTCGTCTTCATCGTTGGCAAATGGATCGGTGTACGACGAGTATAAAACGACGTCGTCGTCGACTGCCAAGGCTGGGAGTGGCGGAAATGGAAGTAGAAAGGCTATGGTTAGCGCTGCTGCTTCTATGGAGTATGAGTCGAGCGACGACGACAGGCACTTCAAGAGGAAGCCGTCGAGGTACGAGGCGTCGCCGCCGCAGAAGGCGGAGCAGGAAGAGCCCAGGCACTCCAGAGGCAGCACCAGGGATCATCGGGATCGCAGGCATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000209 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005815 GO:0005829 GO:0005856 GO:0006275 GO:0006325 GO:0006464 GO:0006479 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006979 GO:0006996 GO:0008150 GO:0008152 GO:0008213 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009635 GO:0009636 GO:0009651 GO:0009743 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010555 GO:0010556 GO:0015630 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016604 GO:0016607 GO:0016740 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032259 GO:0032446 GO:0032991 GO:0033554 GO:0034969 GO:0034971 GO:0036211 GO:0042221 GO:0042493 GO:0042542 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051276 GO:0051603 GO:0051716 GO:0060255 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071840 GO:0072756 GO:0080090 GO:0080134 GO:0097237 GO:0140096 GO:1901562 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902882 GO:1902883 GO:1902884 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DWNN zf-CCHC_2

Protein Analysis

946

Amino Acids

103.82

Weight (kDa)

8.46

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 15, 1551
AasI GACNNNNNNGTC 2 cut(s) 140, 2623
AatII GACGTC 1 cut(s) 2621
Acc36I ACCTGC 1 cut(s) 2383
AccB1I GGYRCC 1 cut(s) 1603
AccB7I CCANNNNNTGG 2 cut(s) 734, 1613
AccI GTMKAC 1 cut(s) 2627
AccII CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
AccIII TCCGGA 3 cut(s) 430, 975, 2476
AclWI GGATC 4 cut(s) 692, 2599, 2820, 2829
AcoI YGGCCR 1 cut(s) 2367
AcsI RAATTY 4 cut(s) 17, 390, 1910, 1976
AcuI CTGAAG 2 cut(s) 417, 1356
AcvI CACGTG 2 cut(s) 2147, 2156
AcyI GRCGYC 2 cut(s) 2618, 2753
AfaI GTAC 5 cut(s) 124, 225, 1123, 2600, 2747
AfeI AGCGCT 1 cut(s) 2680
AflIII ACRYGT 1 cut(s) 220
AgsI TTSAA 7 cut(s) 45, 85, 101, 845, 1136, 1228, 2728
AhdI GACNNNNNGTC 1 cut(s) 1892
AjiI CACGTC 1 cut(s) 584
AjnI CCWGG 7 cut(s) 226, 535, 661, 1576, 2160, 2786, 2807
Alw21I GWGCWC 2 cut(s) 1390, 1699
Alw26I GTCTC 2 cut(s) 1951, 2244
AlwI GGATC 4 cut(s) 692, 2599, 2820, 2829
AlwNI CAGNNNCTG 2 cut(s) 803, 2411
Aor13HI TCCGGA 3 cut(s) 430, 975, 2476
Aor51HI AGCGCT 1 cut(s) 2680
AoxI GGCC 7 cut(s) 233, 812, 1537, 1645, 1963, 2138, 2367
ApaI GGGCCC 1 cut(s) 1541
ApoI RAATTY 4 cut(s) 17, 390, 1910, 1976
ArsI GACNNNNNNTTYG 4 cut(s) 188, 220, 1646, 1678
AspLEI GCGC 6 cut(s) 2228, 2298, 2439, 2510, 2554, 2681
AsuC2I CCSGG 1 cut(s) 1542
AsuHPI GGTGA 6 cut(s) 136, 389, 707, 884, 2020, 2061
AvaII GGWCC 6 cut(s) 59, 518, 533, 1616, 1676, 1886
BaeGI GKGCMC 1 cut(s) 1541
BanI GGYRCC 1 cut(s) 1603
BanII GRGCYC 3 cut(s) 1541, 2506, 2787
BbrPI CACGTG 2 cut(s) 2147, 2156
BbsI GAAGAC 2 cut(s) 2316, 2565
Bbv12I GWGCWC 2 cut(s) 1390, 1699
BccI CCATC 6 cut(s) 518, 568, 751, 764, 862, 2021
BceAI ACGGC 4 cut(s) 248, 2409, 2527, 2722
BcgI CGANNNNNNTGC 4 cut(s) 1465, 1499, 2574, 2608
BciT130I CCWGG 7 cut(s) 228, 537, 663, 1578, 2162, 2788, 2809
BciVI GTATCC 2 cut(s) 983, 1057
BclI TGATCA 1 cut(s) 2284
BcnI CCSGG 1 cut(s) 1542
BcoDI GTCTC 2 cut(s) 1951, 2244
BfaI CTAG 3 cut(s) 309, 1643, 1971
BfmI CTRYAG 3 cut(s) 1214, 2083, 2403
BfoI RGCGCY 2 cut(s) 2299, 2682
BfuAI ACCTGC 1 cut(s) 2383
BfuI GTATCC 2 cut(s) 983, 1057
BglI GCCNNNNNGGC 1 cut(s) 2420
BglII AGATCT 1 cut(s) 1504
BmcAI AGTACT 1 cut(s) 1123
Bme1390I CCNGG 8 cut(s) 228, 537, 663, 1542, 1578, 2162, 2788, 2809
Bme18I GGWCC 6 cut(s) 59, 518, 533, 1616, 1676, 1886
BmeRI GACNNNNNGTC 1 cut(s) 1892
BmgBI CACGTC 1 cut(s) 584
BmiI GGNNCC 9 cut(s) 429, 660, 1368, 1539, 1540, 1605, 1722, 1888, 2166
BmrFI CCNGG 8 cut(s) 228, 537, 663, 1542, 1578, 2162, 2788, 2809
BmsI GCATC 9 cut(s) 913, 1205, 1382, 1518, 1701, 2110, 2372, 2405, 2563
BpiI GAAGAC 2 cut(s) 2316, 2565
BplI GAGNNNNNCTC 2 cut(s) 2110, 2142
BpmI CTGGAG 4 cut(s) 477, 2112, 2183, 2779
Bpu10I CCTNAGC 1 cut(s) 885
BpuEI CTTGAG 1 cut(s) 1683
BpuMI CCSGG 1 cut(s) 1542
BsaAI YACGTR 2 cut(s) 2147, 2156
BsaHI GRCGYC 2 cut(s) 2618, 2753
BsaJI CCNNGG 7 cut(s) 498, 662, 1540, 1716, 2634, 2786, 2808
BsaWI WCCGGW 3 cut(s) 430, 975, 2476
BsaXI ACNNNNNCTCC 2 cut(s) 2687, 2717
Bse1I ACTGG 5 cut(s) 407, 509, 739, 1032, 1565
Bse3DI GCAATG 3 cut(s) 189, 782, 1493
BseAI TCCGGA 3 cut(s) 430, 975, 2476
BseBI CCWGG 7 cut(s) 228, 537, 663, 1578, 2162, 2788, 2809
BseDI CCNNGG 7 cut(s) 498, 662, 1540, 1716, 2634, 2786, 2808
BseGI GGATG 3 cut(s) 370, 439, 2287
BseMI GCAATG 3 cut(s) 189, 782, 1493
BseMII CTCAG 4 cut(s) 84, 876, 1072, 1742
BseNI ACTGG 5 cut(s) 407, 509, 739, 1032, 1565
BseRI GAGGAG 5 cut(s) 612, 615, 1415, 2371, 2374
BseSI GKGCMC 1 cut(s) 1541
BseYI CCCAGC 2 cut(s) 1115, 2639
BsgI GTGCAG 3 cut(s) 431, 816, 1134
Bsh1236I CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
BshFI GGCC 7 cut(s) 235, 814, 1539, 1647, 1965, 2140, 2369
BshNI GGYRCC 1 cut(s) 1603
BsiHKAI GWGCWC 2 cut(s) 1390, 1699
BsiSI CCGG 4 cut(s) 431, 976, 1542, 2477
BslFI GGGAC 1 cut(s) 2061
BsmAI GTCTC 2 cut(s) 1951, 2244
BsmBI CGTCTC 1 cut(s) 1951
BsmFI GGGAC 1 cut(s) 2061
BsmI GAATGC 1 cut(s) 738
BsnI GGCC 7 cut(s) 235, 814, 1539, 1647, 1965, 2140, 2369
Bsp120I GGGCCC 1 cut(s) 1537
Bsp1286I GDGCHC 5 cut(s) 1390, 1541, 1699, 2506, 2787
Bsp13I TCCGGA 3 cut(s) 430, 975, 2476
Bsp19I CCATGG 1 cut(s) 1716
Bsp68I TCGCGA 1 cut(s) 2220
BspANI GGCC 7 cut(s) 235, 814, 1539, 1647, 1965, 2140, 2369
BspCNI CTCAG 4 cut(s) 83, 877, 1071, 1741
BspEI TCCGGA 3 cut(s) 430, 975, 2476
BspFNI CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
BspHI TCATGA 1 cut(s) 1896
BspLI GGNNCC 9 cut(s) 429, 660, 1368, 1539, 1540, 1605, 1722, 1888, 2166
BspMAI CTGCAG 1 cut(s) 2407
BspMI ACCTGC 1 cut(s) 2383
BspPI GGATC 4 cut(s) 692, 2599, 2820, 2829
BspQI GCTCTTC 1 cut(s) 2775
BspT107I GGYRCC 1 cut(s) 1603
BsrDI GCAATG 3 cut(s) 189, 782, 1493
BsrI ACTGG 5 cut(s) 407, 509, 739, 1032, 1565
BssECI CCNNGG 7 cut(s) 498, 662, 1540, 1716, 2634, 2786, 2808
BssNI GRCGYC 2 cut(s) 2618, 2753
BssT1I CCWWGG 3 cut(s) 498, 1716, 2634
Bst2UI CCWGG 7 cut(s) 228, 537, 663, 1578, 2162, 2788, 2809
Bst4CI ACNGT 3 cut(s) 59, 864, 1100
Bst6I CTCTTC 3 cut(s) 159, 2392, 2775
BstACI GRCGYC 2 cut(s) 2618, 2753
BstAPI GCANNNNNTGC 3 cut(s) 945, 2402, 2411
BstBAI YACGTR 2 cut(s) 2147, 2156
BstDEI CTNAG 6 cut(s) 70, 112, 885, 1058, 1728, 2052
BstDSI CCRYGG 1 cut(s) 1716
BstEII GGTNACC 1 cut(s) 142
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 3 cut(s) 370, 439, 2287
BstFNI CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
BstH2I RGCGCY 2 cut(s) 2299, 2682
BstHHI GCGC 6 cut(s) 2228, 2298, 2439, 2510, 2554, 2681
BstMAI GTCTC 2 cut(s) 1951, 2244
BstNI CCWGG 7 cut(s) 228, 537, 663, 1578, 2162, 2788, 2809
BstNSI RCATGY 5 cut(s) 244, 1471, 1486, 1573, 1660
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 8 cut(s) 226, 535, 661, 1540, 1576, 2160, 2786, 2807
BstSFI CTRYAG 3 cut(s) 1214, 2083, 2403
BstSLI GKGCMC 1 cut(s) 1541
BstUI CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
BstV2I GAAGAC 2 cut(s) 2316, 2565
BstX2I RGATCY 1 cut(s) 1504
BstXI CCANNNNNNTGG 1 cut(s) 757
BstYI RGATCY 1 cut(s) 1504
BsuI GTATCC 2 cut(s) 983, 1057
BsuRI GGCC 7 cut(s) 235, 814, 1539, 1647, 1965, 2140, 2369
BtgI CCRYGG 1 cut(s) 1716
BtgZI GCGATG 2 cut(s) 1359, 2040
BtrI CACGTC 1 cut(s) 584
BtsCI GGATG 3 cut(s) 370, 439, 2287
BtsI GCAGTG 2 cut(s) 679, 892
BtsIMutI CAGTG 7 cut(s) 414, 679, 732, 892, 1005, 1025, 2346
BtuMI TCGCGA 1 cut(s) 2220
BveI ACCTGC 1 cut(s) 2383
CaiI CAGNNNCTG 2 cut(s) 803, 2411
CciI TCATGA 1 cut(s) 1896
CfoI GCGC 6 cut(s) 2228, 2298, 2439, 2510, 2554, 2681
CseI GACGC 4 cut(s) 228, 2121, 2168, 2742
Csp6I GTAC 5 cut(s) 123, 224, 1122, 2599, 2746
CviQI GTAC 5 cut(s) 123, 224, 1122, 2599, 2746
DdeI CTNAG 6 cut(s) 70, 112, 885, 1058, 1728, 2052
DrdI GACNNNNNNGTC 2 cut(s) 140, 2623
DriI GACNNNNNGTC 1 cut(s) 1892
DseDI GACNNNNNNGTC 2 cut(s) 140, 2623
EaeI YGGCCR 1 cut(s) 2367
Eam1104I CTCTTC 3 cut(s) 159, 2392, 2775
Eam1105I GACNNNNNGTC 1 cut(s) 1892
EarI CTCTTC 3 cut(s) 159, 2392, 2775
EciI GGCGGA 4 cut(s) 1713, 2447, 2664, 2786
Eco130I CCWWGG 3 cut(s) 498, 1716, 2634
Eco24I GRGCYC 3 cut(s) 1541, 2506, 2787
Eco47I GGWCC 6 cut(s) 59, 518, 533, 1616, 1676, 1886
Eco47III AGCGCT 1 cut(s) 2680
Eco57I CTGAAG 2 cut(s) 417, 1356
Eco72I CACGTG 2 cut(s) 2147, 2156
Eco91I GGTNACC 1 cut(s) 142
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO109I RGGNCCY 3 cut(s) 518, 1538, 2139
EcoO65I GGTNACC 1 cut(s) 142
EcoRI GAATTC 1 cut(s) 1976
EcoRII CCWGG 7 cut(s) 226, 535, 661, 1576, 2160, 2786, 2807
EcoT14I CCWWGG 3 cut(s) 498, 1716, 2634
EcoT22I ATGCAT 1 cut(s) 784
EcoT38I GRGCYC 3 cut(s) 1541, 2506, 2787
ErhI CCWWGG 3 cut(s) 498, 1716, 2634
Esp3I CGTCTC 1 cut(s) 1951
FalI AAGNNNNNCTT 6 cut(s) 156, 188, 932, 964, 1408, 1440
FaqI GGGAC 1 cut(s) 2061
FauI CCCGC 1 cut(s) 2493
FauNDI CATATG 2 cut(s) 778, 1609
FbaI TGATCA 1 cut(s) 2284
FblI GTMKAC 1 cut(s) 2627
FokI GGATG 3 cut(s) 377, 446, 2294
FriOI GRGCYC 3 cut(s) 1541, 2506, 2787
FspBI CTAG 3 cut(s) 309, 1643, 1971
GlaI GCGC 6 cut(s) 2227, 2297, 2438, 2509, 2553, 2680
GsaI CCCAGC 2 cut(s) 1119, 2643
GsuI CTGGAG 4 cut(s) 477, 2112, 2183, 2779
HaeII RGCGCY 2 cut(s) 2299, 2682
HaeIII GGCC 7 cut(s) 235, 814, 1539, 1647, 1965, 2140, 2369
HapII CCGG 4 cut(s) 431, 976, 1542, 2477
HgaI GACGC 4 cut(s) 228, 2121, 2168, 2742
HhaI GCGC 6 cut(s) 2228, 2298, 2439, 2510, 2554, 2681
Hin1I GRCGYC 2 cut(s) 2618, 2753
Hin6I GCGC 6 cut(s) 2226, 2296, 2437, 2508, 2552, 2679
HinP1I GCGC 6 cut(s) 2226, 2296, 2437, 2508, 2552, 2679
HincII GTYRAC 2 cut(s) 933, 2628
HindII GTYRAC 2 cut(s) 933, 2628
HindIII AAGCTT 1 cut(s) 2470
HpaI GTTAAC 1 cut(s) 933
HpaII CCGG 4 cut(s) 431, 976, 1542, 2477
HphI GGTGA 6 cut(s) 136, 389, 707, 884, 2020, 2061
Hpy166II GTNNAC 7 cut(s) 581, 851, 933, 1160, 1679, 2599, 2628
Hpy188I TCNGA 7 cut(s) 262, 318, 358, 1336, 1731, 2200, 2317
Hpy8I GTNNAC 7 cut(s) 581, 851, 933, 1160, 1679, 2599, 2628
HpyAV CCTTC 7 cut(s) 839, 1185, 1357, 1586, 2130, 2352, 2761
HpyCH4III ACNGT 3 cut(s) 59, 864, 1100
HpyCH4IV ACGT 5 cut(s) 203, 583, 2146, 2155, 2618
HpyF3I CTNAG 6 cut(s) 70, 112, 885, 1058, 1728, 2052
HpySE526I ACGT 5 cut(s) 203, 583, 2146, 2155, 2618
Hsp92I GRCGYC 2 cut(s) 2618, 2753
HspAI GCGC 6 cut(s) 2226, 2296, 2437, 2508, 2552, 2679
Kpn2I TCCGGA 3 cut(s) 430, 975, 2476
Ksp22I TGATCA 1 cut(s) 2284
KspAI GTTAAC 1 cut(s) 933
LguI GCTCTTC 1 cut(s) 2775
LmnI GCTCC 5 cut(s) 433, 1393, 2164, 2434, 2773
LweI GCATC 9 cut(s) 913, 1205, 1382, 1518, 1701, 2110, 2372, 2405, 2563
MaeI CTAG 3 cut(s) 309, 1643, 1971
MaeII ACGT 5 cut(s) 203, 583, 2146, 2155, 2618
MaeIII GTNAC 7 cut(s) 142, 250, 644, 1094, 2105, 2147, 2156
MfeI CAATTG 3 cut(s) 45, 246, 2058
MflI RGATCY 1 cut(s) 1504
MhlI GDGCHC 5 cut(s) 1390, 1541, 1699, 2506, 2787
MluCI AATT 8 cut(s) 17, 45, 213, 246, 390, 1910, 1976, 2058
MluI ACGCGT 1 cut(s) 220
MlyI GAGTC 6 cut(s) 362, 1154, 1358, 1679, 2576, 2711
MmeI TCCRAC 4 cut(s) 591, 725, 1205, 1864
Mph1103I ATGCAT 1 cut(s) 784
MroI TCCGGA 3 cut(s) 430, 975, 2476
MseI TTAA 6 cut(s) 21, 212, 474, 482, 932, 951
MslI CAYNNNNRTG 4 cut(s) 755, 1586, 1757, 2280
MspA1I CMGCKG 6 cut(s) 323, 1514, 2016, 2402, 2411, 2420
MspI CCGG 4 cut(s) 431, 976, 1542, 2477
MspR9I CCNGG 8 cut(s) 228, 537, 663, 1542, 1578, 2162, 2788, 2809
MunI CAATTG 3 cut(s) 45, 246, 2058
Mva1269I GAATGC 1 cut(s) 738
MvaI CCWGG 7 cut(s) 228, 537, 663, 1578, 2162, 2788, 2809
MvnI CGCG 6 cut(s) 222, 2115, 2179, 2220, 2226, 2508
NciI CCSGG 1 cut(s) 1542
NcoI CCATGG 1 cut(s) 1716
NdeI CATATG 2 cut(s) 778, 1609
NlaIV GGNNCC 9 cut(s) 429, 660, 1368, 1539, 1540, 1605, 1722, 1888, 2166
NmuCI GTSAC 5 cut(s) 142, 644, 2105, 2147, 2156
NruI TCGCGA 1 cut(s) 2220
NsiI ATGCAT 1 cut(s) 784
NspI RCATGY 5 cut(s) 244, 1471, 1486, 1573, 1660
PaeI GCATGC 3 cut(s) 244, 1471, 1573
PagI TCATGA 1 cut(s) 1896
PciSI GCTCTTC 1 cut(s) 2775
PcsI WCGNNNNNNNCGW 5 cut(s) 2152, 2265, 2576, 2621, 2624
PctI GAATGC 1 cut(s) 738
PfeI GAWTC 9 cut(s) 41, 101, 190, 257, 326, 1077, 1085, 1171, 2318
PflFI GACNNNGTC 1 cut(s) 2620
PflMI CCANNNNNTGG 2 cut(s) 734, 1613
PleI GAGTC 6 cut(s) 361, 1153, 1357, 1679, 2575, 2710
PmaCI CACGTG 2 cut(s) 2147, 2156
PmlI CACGTG 2 cut(s) 2147, 2156
PpsI GAGTC 6 cut(s) 361, 1153, 1357, 1679, 2575, 2710
Ppu21I YACGTR 2 cut(s) 2147, 2156
PpuMI RGGWCCY 1 cut(s) 518
PsiI TTATAA 2 cut(s) 15, 1551
Psp5II RGGWCCY 1 cut(s) 518
Psp6I CCWGG 7 cut(s) 226, 535, 661, 1576, 2160, 2786, 2807
PspCI CACGTG 2 cut(s) 2147, 2156
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 2 cut(s) 1115, 2639
PspGI CCWGG 7 cut(s) 226, 535, 661, 1576, 2160, 2786, 2807
PspN4I GGNNCC 9 cut(s) 429, 660, 1368, 1539, 1540, 1605, 1722, 1888, 2166
PspOMI GGGCCC 1 cut(s) 1537
PspPPI RGGWCCY 1 cut(s) 518
PstI CTGCAG 1 cut(s) 2407
PstNI CAGNNNCTG 2 cut(s) 803, 2411
PsuI RGATCY 1 cut(s) 1504
PsyI GACNNNGTC 1 cut(s) 2620
PvuII CAGCTG 4 cut(s) 323, 1514, 2402, 2411
RruI TCGCGA 1 cut(s) 2220
RsaI GTAC 5 cut(s) 124, 225, 1123, 2600, 2747
RsaNI GTAC 5 cut(s) 123, 224, 1122, 2599, 2746
RseI CAYNNNNRTG 4 cut(s) 755, 1586, 1757, 2280
SalI GTCGAC 1 cut(s) 2626
SapI GCTCTTC 1 cut(s) 2775
SaqAI TTAA 6 cut(s) 21, 212, 474, 482, 932, 951
ScaI AGTACT 1 cut(s) 1123
SchI GAGTC 6 cut(s) 362, 1154, 1358, 1679, 2576, 2711
ScrFI CCNGG 8 cut(s) 228, 537, 663, 1542, 1578, 2162, 2788, 2809
SduI GDGCHC 5 cut(s) 1390, 1541, 1699, 2506, 2787
SfaNI GCATC 9 cut(s) 913, 1205, 1382, 1518, 1701, 2110, 2372, 2405, 2563
SfcI CTRYAG 3 cut(s) 1214, 2083, 2403
SinI GGWCC 6 cut(s) 59, 518, 533, 1616, 1676, 1886
SmiMI CAYNNNNRTG 4 cut(s) 755, 1586, 1757, 2280
SmlI CTYRAG 1 cut(s) 1698
SmoI CTYRAG 1 cut(s) 1698
SphI GCATGC 3 cut(s) 244, 1471, 1573
Sse9I AATT 8 cut(s) 17, 45, 213, 246, 390, 1910, 1976, 2058
SspI AATATT 1 cut(s) 96
SspMI CTAG 3 cut(s) 309, 1643, 1971
StyD4I CCNGG 8 cut(s) 226, 535, 661, 1540, 1576, 2160, 2786, 2807
StyI CCWWGG 3 cut(s) 498, 1716, 2634
TaaI ACNGT 3 cut(s) 59, 864, 1100
TaiI ACGT 5 cut(s) 206, 586, 2149, 2158, 2621
TaqII GACCGA 1 cut(s) 2250
TasI AATT 8 cut(s) 17, 45, 213, 246, 390, 1910, 1976, 2058
TatI WGTACW 1 cut(s) 1121
TauI GCSGC 8 cut(s) 2025, 2417, 2423, 2426, 2429, 2432, 2761, 2764
TfiI GAWTC 9 cut(s) 41, 101, 190, 257, 326, 1077, 1085, 1171, 2318
Tru1I TTAA 6 cut(s) 21, 212, 474, 482, 932, 951
Tru9I TTAA 6 cut(s) 21, 212, 474, 482, 932, 951
TscAI CASTG 7 cut(s) 414, 686, 739, 899, 1005, 1032, 2353
TseFI GTSAC 5 cut(s) 142, 644, 2105, 2147, 2156
Tsp45I GTSAC 5 cut(s) 142, 644, 2105, 2147, 2156
TspGWI ACGGA 2 cut(s) 2508, 2543
TspRI CASTG 7 cut(s) 414, 686, 739, 899, 1005, 1032, 2353
Tth111I GACNNNGTC 1 cut(s) 2620
Van91I CCANNNNNTGG 2 cut(s) 734, 1613
VpaK11BI GGWCC 6 cut(s) 59, 518, 533, 1616, 1676, 1886
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 4 cut(s) 17, 390, 1910, 1976
XceI RCATGY 5 cut(s) 244, 1471, 1486, 1573, 1660
XcmI CCANNNNNNNNNTGG 1 cut(s) 501
XmiI GTMKAC 1 cut(s) 2627
XspI CTAG 3 cut(s) 309, 1643, 1971
ZraI GACGTC 1 cut(s) 2619
ZrmI AGTACT 1 cut(s) 1123
Zsp2I ATGCAT 1 cut(s) 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.