Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| protein_MS5 | PF04776 | 233 - 349 | 6.8e-35 | Protein MS5 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1041 |
| Acc16I | TGCGCA | 1 cut(s) | 26 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 110, 215 |
| AccII | CGCG | 1 cut(s) | 288 |
| AciI | CCGC | 3 cut(s) | 20, 66, 863 |
| AclWI | GGATC | 3 cut(s) | 121, 200, 512 |
| AcsI | RAATTY | 1 cut(s) | 282 |
| AcuI | CTGAAG | 1 cut(s) | 624 |
| AfaI | GTAC | 5 cut(s) | 198, 344, 416, 637, 888 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 110, 215, 259, 1023 |
| AflIII | ACRYGT | 3 cut(s) | 551, 569, 1036 |
| AgsI | TTSAA | 4 cut(s) | 32, 425, 632, 797 |
| AhlI | ACTAGT | 1 cut(s) | 326 |
| AjiI | CACGTC | 1 cut(s) | 454 |
| AjnI | CCWGG | 1 cut(s) | 1030 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 254, 286 |
| AluBI | AGCT | 3 cut(s) | 566, 671, 922 |
| AluI | AGCT | 3 cut(s) | 566, 671, 922 |
| Alw26I | GTCTC | 2 cut(s) | 636, 831 |
| AlwI | GGATC | 3 cut(s) | 121, 200, 512 |
| ApeKI | GCWGC | 2 cut(s) | 22, 865 |
| ApoI | RAATTY | 1 cut(s) | 282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 269 |
| AspLEI | GCGC | 2 cut(s) | 27, 484 |
| AspS9I | GGNCC | 1 cut(s) | 980 |
| AsuC2I | CCSGG | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 1 cut(s) | 386 |
| AvaII | GGWCC | 1 cut(s) | 980 |
| AxyI | CCTNAGG | 1 cut(s) | 590 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 27, 60 |
| BanII | GRGCYC | 1 cut(s) | 434 |
| BauI | CACGAG | 1 cut(s) | 894 |
| BbsI | GAAGAC | 1 cut(s) | 591 |
| BbvCI | CCTCAGC | 1 cut(s) | 507 |
| BbvI | GCAGC | 2 cut(s) | 9, 852 |
| BccI | CCATC | 7 cut(s) | 114, 115, 213, 220, 651, 947, 1016 |
| BciT130I | CCWGG | 1 cut(s) | 1032 |
| BciVI | GTATCC | 1 cut(s) | 588 |
| BclI | TGATCA | 1 cut(s) | 241 |
| BcnI | CCSGG | 1 cut(s) | 254 |
| BcoDI | GTCTC | 2 cut(s) | 636, 831 |
| BcuI | ACTAGT | 1 cut(s) | 326 |
| BfaI | CTAG | 4 cut(s) | 60, 327, 396, 471 |
| BfmI | CTRYAG | 2 cut(s) | 610, 866 |
| BfuI | GTATCC | 1 cut(s) | 588 |
| BisI | GCNGC | 3 cut(s) | 23, 863, 866 |
| BlsI | GCNGC | 3 cut(s) | 24, 864, 867 |
| Bme1390I | CCNGG | 2 cut(s) | 254, 1032 |
| Bme18I | GGWCC | 1 cut(s) | 980 |
| BmgBI | CACGTC | 1 cut(s) | 454 |
| BmgT120I | GGNCC | 1 cut(s) | 980 |
| BmrFI | CCNGG | 2 cut(s) | 254, 1032 |
| BmsI | GCATC | 1 cut(s) | 438 |
| BoxI | GACNNNNGTC | 1 cut(s) | 605 |
| BpiI | GAAGAC | 1 cut(s) | 591 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 390, 422 |
| BpmI | CTGGAG | 1 cut(s) | 660 |
| Bpu10I | CCTNAGC | 1 cut(s) | 507 |
| BpuEI | CTTGAG | 5 cut(s) | 461, 833, 908, 972, 1067 |
| BpuMI | CCSGG | 1 cut(s) | 254 |
| BsaAI | YACGTR | 1 cut(s) | 317 |
| BsaBI | GATNNNNATC | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 254, 284 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 110, 215, 259, 1023 |
| Bse1I | ACTGG | 2 cut(s) | 643, 794 |
| Bse21I | CCTNAGG | 1 cut(s) | 590 |
| Bse8I | GATNNNNATC | 1 cut(s) | 240 |
| BseBI | CCWGG | 1 cut(s) | 1032 |
| BseGI | GGATG | 5 cut(s) | 100, 125, 224, 721, 774 |
| BseJI | GATNNNNATC | 1 cut(s) | 240 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 110, 215, 259, 1023 |
| BseMII | CTCAG | 4 cut(s) | 498, 581, 693, 798 |
| BseNI | ACTGG | 2 cut(s) | 643, 794 |
| BseRI | GAGGAG | 1 cut(s) | 963 |
| BseXI | GCAGC | 2 cut(s) | 9, 852 |
| BseYI | CCCAGC | 1 cut(s) | 929 |
| Bsh1236I | CGCG | 1 cut(s) | 288 |
| Bsh1285I | CGRYCG | 2 cut(s) | 16, 20 |
| BsiEI | CGRYCG | 2 cut(s) | 16, 20 |
| BsiSI | CCGG | 1 cut(s) | 254 |
| BslFI | GGGAC | 1 cut(s) | 417 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 110, 215, 259, 1023 |
| BsmAI | GTCTC | 2 cut(s) | 636, 831 |
| BsmBI | CGTCTC | 1 cut(s) | 636 |
| BsmFI | GGGAC | 1 cut(s) | 417 |
| BsmI | GAATGC | 1 cut(s) | 940 |
| Bsp1286I | GDGCHC | 1 cut(s) | 434 |
| Bsp1407I | TGTACA | 2 cut(s) | 196, 342 |
| Bsp143I | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| Bsp68I | TCGCGA | 1 cut(s) | 288 |
| BspACI | CCGC | 3 cut(s) | 20, 66, 863 |
| BspCNI | CTCAG | 4 cut(s) | 499, 582, 694, 799 |
| BspFNI | CGCG | 1 cut(s) | 288 |
| BspHI | TCATGA | 1 cut(s) | 49 |
| BspMAI | CTGCAG | 1 cut(s) | 870 |
| BspPI | GGATC | 3 cut(s) | 121, 200, 512 |
| BsrGI | TGTACA | 2 cut(s) | 196, 342 |
| BsrI | ACTGG | 2 cut(s) | 643, 794 |
| BssMI | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| BssSI | CACGAG | 1 cut(s) | 894 |
| Bst2BI | CACGAG | 1 cut(s) | 894 |
| Bst2UI | CCWGG | 1 cut(s) | 1032 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 1018 |
| BstAUI | TGTACA | 2 cut(s) | 196, 342 |
| BstBAI | YACGTR | 1 cut(s) | 317 |
| BstDEI | CTNAG | 4 cut(s) | 507, 590, 702, 807 |
| BstF5I | GGATG | 5 cut(s) | 100, 125, 224, 721, 774 |
| BstFNI | CGCG | 1 cut(s) | 288 |
| BstHHI | GCGC | 2 cut(s) | 27, 484 |
| BstKTI | GATC | 8 cut(s) | 16, 116, 208, 244, 520, 748, 994, 1072 |
| BstMAI | GTCTC | 2 cut(s) | 636, 831 |
| BstMBI | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| BstMCI | CGRYCG | 2 cut(s) | 16, 20 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 285, 935 |
| BstNI | CCWGG | 1 cut(s) | 1032 |
| BstNSI | RCATGY | 3 cut(s) | 555, 573, 1040 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 605 |
| BstSCI | CCNGG | 2 cut(s) | 252, 1030 |
| BstSFI | CTRYAG | 2 cut(s) | 610, 866 |
| BstSNI | TACGTA | 1 cut(s) | 317 |
| BstUI | CGCG | 1 cut(s) | 288 |
| BstV1I | GCAGC | 2 cut(s) | 9, 852 |
| BstV2I | GAAGAC | 1 cut(s) | 591 |
| BstX2I | RGATCY | 2 cut(s) | 113, 1069 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 219 |
| BstYI | RGATCY | 2 cut(s) | 113, 1069 |
| Bsu36I | CCTNAGG | 1 cut(s) | 590 |
| BsuI | GTATCC | 1 cut(s) | 588 |
| BtgZI | GCGATG | 1 cut(s) | 670 |
| BtrI | CACGTC | 1 cut(s) | 454 |
| BtsCI | GGATG | 5 cut(s) | 100, 125, 224, 721, 774 |
| BtsI | GCAGTG | 1 cut(s) | 742 |
| BtsIMutI | CAGTG | 2 cut(s) | 742, 804 |
| BtuMI | TCGCGA | 1 cut(s) | 288 |
| CciI | TCATGA | 1 cut(s) | 49 |
| CfoI | GCGC | 2 cut(s) | 27, 484 |
| Cfr13I | GGNCC | 1 cut(s) | 980 |
| CseI | GACGC | 2 cut(s) | 200, 804 |
| Csp6I | GTAC | 5 cut(s) | 197, 343, 415, 636, 887 |
| CviAII | CATG | 8 cut(s) | 50, 552, 570, 732, 841, 977, 1037, 1066 |
| CviQI | GTAC | 5 cut(s) | 197, 343, 415, 636, 887 |
| DdeI | CTNAG | 4 cut(s) | 507, 590, 702, 807 |
| DpnI | GATC | 8 cut(s) | 15, 115, 207, 243, 519, 747, 993, 1071 |
| DpnII | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| DraI | TTTAAA | 1 cut(s) | 907 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1041 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1041 |
| Eco105I | TACGTA | 1 cut(s) | 317 |
| Eco24I | GRGCYC | 1 cut(s) | 434 |
| Eco32I | GATATC | 1 cut(s) | 682 |
| Eco47I | GGWCC | 1 cut(s) | 980 |
| Eco57I | CTGAAG | 1 cut(s) | 624 |
| Eco81I | CCTNAGG | 1 cut(s) | 590 |
| EcoRII | CCWGG | 1 cut(s) | 1030 |
| EcoRV | GATATC | 1 cut(s) | 682 |
| EcoT38I | GRGCYC | 1 cut(s) | 434 |
| Esp3I | CGTCTC | 1 cut(s) | 636 |
| FaeI | CATG | 8 cut(s) | 53, 555, 573, 735, 844, 980, 1040, 1069 |
| FaqI | GGGAC | 1 cut(s) | 417 |
| FatI | CATG | 8 cut(s) | 49, 551, 569, 731, 840, 976, 1036, 1065 |
| FbaI | TGATCA | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 3 cut(s) | 23, 863, 866 |
| FokI | GGATG | 5 cut(s) | 87, 132, 231, 728, 761 |
| FriOI | GRGCYC | 1 cut(s) | 434 |
| Fsp4HI | GCNGC | 3 cut(s) | 23, 863, 866 |
| FspBI | CTAG | 4 cut(s) | 60, 327, 396, 471 |
| FspI | TGCGCA | 1 cut(s) | 26 |
| GlaI | GCGC | 2 cut(s) | 26, 483 |
| GluI | GCNGC | 3 cut(s) | 23, 863, 866 |
| GsaI | CCCAGC | 1 cut(s) | 933 |
| GsuI | CTGGAG | 1 cut(s) | 660 |
| HapII | CCGG | 1 cut(s) | 254 |
| HgaI | GACGC | 2 cut(s) | 200, 804 |
| HhaI | GCGC | 2 cut(s) | 27, 484 |
| Hin1II | CATG | 8 cut(s) | 53, 555, 573, 735, 844, 980, 1040, 1069 |
| Hin6I | GCGC | 2 cut(s) | 25, 482 |
| HinP1I | GCGC | 2 cut(s) | 25, 482 |
| HincII | GTYRAC | 2 cut(s) | 250, 310 |
| HindII | GTYRAC | 2 cut(s) | 250, 310 |
| HinfI | GANTC | 7 cut(s) | 290, 405, 474, 530, 628, 767, 1027 |
| HpaII | CCGG | 1 cut(s) | 254 |
| HphI | GGTGA | 1 cut(s) | 386 |
| Hpy166II | GTNNAC | 5 cut(s) | 250, 310, 332, 343, 983 |
| Hpy188I | TCNGA | 6 cut(s) | 190, 295, 324, 715, 772, 779 |
| Hpy8I | GTNNAC | 5 cut(s) | 250, 310, 332, 343, 983 |
| Hpy99I | CGWCG | 3 cut(s) | 299, 458, 1022 |
| HpyAV | CCTTC | 2 cut(s) | 377, 827 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 1018 |
| HpyCH4IV | ACGT | 3 cut(s) | 316, 453, 535 |
| HpyCH4V | TGCA | 4 cut(s) | 451, 735, 763, 868 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 285, 935 |
| HpyF3I | CTNAG | 4 cut(s) | 507, 590, 702, 807 |
| HpySE526I | ACGT | 3 cut(s) | 316, 453, 535 |
| Hsp92II | CATG | 8 cut(s) | 53, 555, 573, 735, 844, 980, 1040, 1069 |
| HspAI | GCGC | 2 cut(s) | 25, 482 |
| Ksp22I | TGATCA | 1 cut(s) | 241 |
| Kzo9I | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| Lsp1109I | GCAGC | 2 cut(s) | 9, 852 |
| LweI | GCATC | 1 cut(s) | 438 |
| MaeI | CTAG | 4 cut(s) | 60, 327, 396, 471 |
| MaeII | ACGT | 3 cut(s) | 316, 453, 535 |
| MaeIII | GTNAC | 2 cut(s) | 374, 556 |
| MalI | GATC | 8 cut(s) | 15, 115, 207, 243, 519, 747, 993, 1071 |
| MboI | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| MboII | GAAGA | 9 cut(s) | 44, 95, 143, 191, 242, 596, 911, 934, 1023 |
| MflI | RGATCY | 2 cut(s) | 113, 1069 |
| MhlI | GDGCHC | 1 cut(s) | 434 |
| MluCI | AATT | 4 cut(s) | 182, 282, 466, 615 |
| MlyI | GAGTC | 2 cut(s) | 399, 776 |
| MmeI | TCCRAC | 2 cut(s) | 318, 347 |
| MnlI | CCTC | 5 cut(s) | 502, 585, 837, 984, 996 |
| MroXI | GAANNNNTTC | 1 cut(s) | 269 |
| MseI | TTAA | 5 cut(s) | 92, 618, 873, 906, 1053 |
| MslI | CAYNNNNRTG | 1 cut(s) | 217 |
| MspA1I | CMGCKG | 2 cut(s) | 22, 865 |
| MspI | CCGG | 1 cut(s) | 254 |
| MspR9I | CCNGG | 2 cut(s) | 254, 1032 |
| Mva1269I | GAATGC | 1 cut(s) | 940 |
| MvaI | CCWGG | 1 cut(s) | 1032 |
| MvnI | CGCG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 285, 935 |
| NciI | CCSGG | 1 cut(s) | 254 |
| NdeII | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| NlaIII | CATG | 8 cut(s) | 53, 555, 573, 735, 844, 980, 1040, 1069 |
| NmuCI | GTSAC | 1 cut(s) | 374 |
| NruI | TCGCGA | 1 cut(s) | 288 |
| NsbI | TGCGCA | 1 cut(s) | 26 |
| NspI | RCATGY | 3 cut(s) | 555, 573, 1040 |
| PagI | TCATGA | 1 cut(s) | 49 |
| PciI | ACATGT | 3 cut(s) | 551, 569, 1036 |
| PctI | GAATGC | 1 cut(s) | 940 |
| PdmI | GAANNNNTTC | 1 cut(s) | 269 |
| PfeI | GAWTC | 5 cut(s) | 290, 474, 530, 628, 1027 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 110, 215 |
| PfoI | TCCNGGA | 1 cut(s) | 1030 |
| PkrI | GCNGC | 3 cut(s) | 24, 864, 867 |
| Ple19I | CGATCG | 1 cut(s) | 16 |
| PleI | GAGTC | 2 cut(s) | 399, 775 |
| PpsI | GAGTC | 2 cut(s) | 399, 775 |
| Ppu21I | YACGTR | 1 cut(s) | 317 |
| PscI | ACATGT | 3 cut(s) | 551, 569, 1036 |
| PshAI | GACNNNNGTC | 1 cut(s) | 605 |
| Psp6I | CCWGG | 1 cut(s) | 1030 |
| PspFI | CCCAGC | 1 cut(s) | 929 |
| PspGI | CCWGG | 1 cut(s) | 1030 |
| PspPI | GGNCC | 1 cut(s) | 980 |
| PstI | CTGCAG | 1 cut(s) | 870 |
| PsuI | RGATCY | 2 cut(s) | 113, 1069 |
| PvuI | CGATCG | 1 cut(s) | 16 |
| RruI | TCGCGA | 1 cut(s) | 288 |
| RsaI | GTAC | 5 cut(s) | 198, 344, 416, 637, 888 |
| RsaNI | GTAC | 5 cut(s) | 197, 343, 415, 636, 887 |
| RseI | CAYNNNNRTG | 1 cut(s) | 217 |
| SaqAI | TTAA | 5 cut(s) | 92, 618, 873, 906, 1053 |
| SatI | GCNGC | 3 cut(s) | 23, 863, 866 |
| Sau3AI | GATC | 8 cut(s) | 13, 113, 205, 241, 517, 745, 991, 1069 |
| Sau96I | GGNCC | 1 cut(s) | 980 |
| SchI | GAGTC | 2 cut(s) | 399, 776 |
| ScrFI | CCNGG | 2 cut(s) | 254, 1032 |
| SduI | GDGCHC | 1 cut(s) | 434 |
| SfaNI | GCATC | 1 cut(s) | 438 |
| SfcI | CTRYAG | 2 cut(s) | 610, 866 |
| SinI | GGWCC | 1 cut(s) | 980 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 217 |
| SmlI | CTYRAG | 5 cut(s) | 440, 848, 923, 987, 1046 |
| SmoI | CTYRAG | 5 cut(s) | 440, 848, 923, 987, 1046 |
| SnaBI | TACGTA | 1 cut(s) | 317 |
| SpeI | ACTAGT | 1 cut(s) | 326 |
| Sse9I | AATT | 4 cut(s) | 182, 282, 466, 615 |
| SsiI | CCGC | 3 cut(s) | 20, 66, 863 |
| SspMI | CTAG | 4 cut(s) | 60, 327, 396, 471 |
| StyD4I | CCNGG | 2 cut(s) | 252, 1030 |
| TaaI | ACNGT | 2 cut(s) | 43, 1018 |
| TaiI | ACGT | 3 cut(s) | 319, 456, 538 |
| TaqI | TCGA | 6 cut(s) | 12, 16, 77, 173, 456, 1020 |
| TasI | AATT | 4 cut(s) | 182, 282, 466, 615 |
| TatI | WGTACW | 2 cut(s) | 196, 342 |
| TauI | GCSGC | 1 cut(s) | 865 |
| TfiI | GAWTC | 5 cut(s) | 290, 474, 530, 628, 1027 |
| Tru1I | TTAA | 5 cut(s) | 92, 618, 873, 906, 1053 |
| Tru9I | TTAA | 5 cut(s) | 92, 618, 873, 906, 1053 |
| TscAI | CASTG | 2 cut(s) | 742, 811 |
| TseFI | GTSAC | 1 cut(s) | 374 |
| TseI | GCWGC | 2 cut(s) | 22, 865 |
| Tsp45I | GTSAC | 1 cut(s) | 374 |
| TspDTI | ATGAA | 1 cut(s) | 597 |
| TspGWI | ACGGA | 1 cut(s) | 312 |
| TspRI | CASTG | 2 cut(s) | 742, 811 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 110, 215 |
| VpaK11BI | GGWCC | 1 cut(s) | 980 |
| XapI | RAATTY | 1 cut(s) | 282 |
| XbaI | TCTAGA | 1 cut(s) | 470 |
| XceI | RCATGY | 3 cut(s) | 555, 573, 1040 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 216 |
| XmnI | GAANNNNTTC | 1 cut(s) | 269 |
| XspI | CTAG | 4 cut(s) | 60, 327, 396, 471 |