Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Forward (+)

1422634 .. 1426879

Gene Structure 4246 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04885.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGAGCAGAGATTCAGTAAGAATCGTTGGGGTTCTTCTATGGATGTGTATGTGGGTTTGTTGTTATGGGGATGGAGAGTATCTGTTGTACAAGGACCCGAAACAGACGGTGTCAGATCGAGTTGCGGATTTGTTTGGTAGAATGACTTTGGAAGAGAAGATTGGCCAGATGGTGCAGATTGATAGAAGTGTTGCCACTGTCAACATTATGAGAGATTACTTCATCGGCAGTGTATTGAGTGGTGGTGGGAGCGCTCCACTTCCTGAGGCAAGTGCTCAGAATTGGGTTGATATGATAAATGAGTACCAAAAGGGGGCTCTAGTTAGTCGTTTGGGAATTCCTATGATATATGGCATTGATGCCGTTCACGGGCATAACAATGTCTATAACGCTACTATTTTCCCTCACAATGTTGGTCTTGGAGCCACTAGGGATCCTGATCTTGTTAAGAGGATTGGAGCAGCAACTGCAGTCGAAGTCAGAGCCACTGGAATCCCATACACATTTGCTCCTTGCATTGCAGTTTGTAGAGATCCCAGATGGGGTAGATGTTATGAGAGCTACAGCGAGGATCACAAAGTCGTGGAAGACATGACGGATGTCATACTTGGTTTACAAGGAGAGCCTCCTTCCAACTATAAGCACGGAGTTCCATTCGTTGGTGGCAGGGATAAAGTTGCAGCCTGTGCCAAGCATTACGTGGGAGATGGTGGGACAACCCGCGGAGTAAACGAGAACAACACTGTGACTGATTTACACGGTCTTCTTAGCGTTCACATGCCCGCTTATGCTGATGCAGTTTACAAAGGTGTTTCCACAGTGATGGTTTCATATTCGAGCTGGAATGGTGAGAAGATGCATGCAAATACTGAGCTGATCACAGGGTATCTTAAGGGTACCCTTAAGTTTAAGGGTTTTGTTATCTCGGATTGGCAAGGTGTCGATAAGATTTCCACACCACCGCATACGCACTACACAGCTTCCGTCCGAGCTGCAATTCAAGCTGGAATTGATATGGTCATGGTCCCCTTCAACTTTACCGAGTTTGTCAATGATCTTACAACCTTGGTGAAGAATAATTCAATTCCTGTCACTCGGATTGATGATGCTGTCAGAAGAATCCTGCTTGTCAAGTTCACCATGGGTCTTTTTGAGAACCCTTTGGCTGATTACAGCTTTTCCAGTGAACTAGGAAGCCAGGCACATAGAGACTTGGCAAGGGAGGCTGTTAGAAAATCCCTTGTGCTACTGAAGAACGGGAACAAAACCAATCCTATGCTCCCACTTCCCAGGAAGACTTCAAAGATCCTAGTCGCTGGCACTCACGCTGATAATTTAGGTTATCAGTGTGGTGGTTGGACCATAACTTGGCAAGGATTTAGCGGTAATAAGAACACGAGAGGGACTACACTTCTTAGCGCTGTAAAATCAGCTGTTGATCAAAGCACTGAAGTTGTCTTCCGCGAGAACCCGGATGCTGAATTCATCAAATCGAACAACTTTGCTTATGCAATCATTGCTGTTGGTGAACCTCCATATGCAGAAACAGCTGGAGACAGCGACAAGCTAACTATGCTTGACCCCGGTCCAGCGATTATTAGCTCCACTTGTCAGGCTGTCAAGTGTGTGGTTGTGGTCATTTCAGGTAGACCACTTGTGATGGAACCTTACGTTGCCTCGATCGATGCATTGGTTGCAGCATGGCTACCAGGAACAGAAGGCCAAGGTATCACTGATGCTCTCTTTGGGGACCATGGCTTCAGTGGAAAACTTCCTGTTACATGGTTCAGAAACACAGAGCAGTTGCCTATGAGCTATGGAGATACACATTATGACCCGCTATTTGCTTACGGGTCTGGTCTTGAAACTGAGTCTGTTGCGAGCATTGTTGCTAGGTCAACCTCAGCTTCTGCTACTAACACAAAGCCCTGCTTATACACAGTCCTTGTTTCTGCTACATTGTGTCTGTTTATCTTCCCAAGCTTAAGCCGACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

665

Amino Acids

72.3

Weight (kDa)

6.12

Isoelectric Point (pI)

28.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	49 - 375	1.5e-67	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	414 - 621	4e-36	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	896
AccB1I	GGYRCC	1 cut(s)	896
AccB7I	CCANNNNNTGG	2 cut(s)	659, 1368
AccI	GTMKAC	1 cut(s)	1648
AccII	CGCG	2 cut(s)	723, 1464
AciI	CCGC	8 cut(s)	125, 721, 723, 783, 962, 1383, 1462, 1838
AclWI	GGATC	5 cut(s)	428, 441, 527, 579, 1300
AcoI	YGGCCR	1 cut(s)	163
AcsI	RAATTY	2 cut(s)	336, 1481
AcuI	CTGAAG	3 cut(s)	1271, 1470, 1744
AfaI	GTAC	3 cut(s)	89, 305, 898
AfeI	AGCGCT	2 cut(s)	253, 1420
AfiI	CCNNNNNNNGG	5 cut(s)	313, 369, 542, 659, 1368
AflII	CTTAAG	3 cut(s)	890, 902, 1984
AgsI	TTSAA	5 cut(s)	1001, 1033, 1083, 1302, 1865
AjnI	CCWGG	3 cut(s)	1197, 1289, 1708
AjuI	GAANNNNNNNTTGG	2 cut(s)	144, 176
Alw21I	GWGCWC	1 cut(s)	277
Alw26I	GTCTC	2 cut(s)	1203, 1548
AlwI	GGATC	5 cut(s)	428, 441, 527, 579, 1300
AlwNI	CAGNNNCTG	2 cut(s)	467, 1910
Aor51HI	AGCGCT	2 cut(s)	253, 1420
AoxI	GGCC	2 cut(s)	163, 1720
ApeKI	GCWGC	4 cut(s)	461, 680, 992, 1697
ApoI	RAATTY	2 cut(s)	336, 1481
ArsI	GACNNNNNNTTYG	2 cut(s)	1826, 1858
Asp718I	GGTACC	1 cut(s)	896
AspLEI	GCGC	2 cut(s)	254, 1421
AspS9I	GGNCC	5 cut(s)	94, 1024, 1359, 1586, 1750
AsuC2I	CCSGG	2 cut(s)	1472, 1584
AsuHPI	GGTGA	4 cut(s)	860, 1081, 1129, 1538
AvaII	GGWCC	5 cut(s)	94, 1024, 1359, 1586, 1750
AxyI	CCTNAGG	1 cut(s)	264
BalI	TGGCCA	1 cut(s)	165
BamHI	GGATCC	1 cut(s)	433
BanI	GGYRCC	1 cut(s)	896
BanII	GRGCYC	1 cut(s)	319
BauI	CACGAG	1 cut(s)	1396
BbsI	GAAGAC	4 cut(s)	594, 755, 1301, 1450
Bbv12I	GWGCWC	1 cut(s)	277
BbvCI	CCTCAGC	1 cut(s)	1903
BbvI	GCAGC	4 cut(s)	473, 692, 979, 1709
BccI	CCATC	6 cut(s)	65, 163, 534, 701, 817, 1654
BceAI	ACGGC	1 cut(s)	347
BciT130I	CCWGG	3 cut(s)	1199, 1291, 1710
BclI	TGATCA	2 cut(s)	876, 1438
BcnI	CCSGG	2 cut(s)	1472, 1584
BcoDI	GTCTC	2 cut(s)	1203, 1548
BfaI	CTAG	5 cut(s)	320, 429, 1190, 1310, 1893
BfmI	CTRYAG	2 cut(s)	468, 562
BfoI	RGCGCY	2 cut(s)	255, 1422
BfrI	CTTAAG	3 cut(s)	890, 902, 1984
BisI	GCNGC	4 cut(s)	462, 681, 993, 1698
BlsI	GCNGC	4 cut(s)	463, 682, 994, 1699
Bme1390I	CCNGG	5 cut(s)	1199, 1291, 1472, 1584, 1710
Bme18I	GGWCC	5 cut(s)	94, 1024, 1359, 1586, 1750
BmgT120I	GGNCC	5 cut(s)	94, 1024, 1359, 1586, 1750
BmiI	GGNNCC	7 cut(s)	96, 424, 435, 898, 1026, 1665, 1751
BmrFI	CCNGG	5 cut(s)	1199, 1291, 1472, 1584, 1710
BmsI	GCATC	7 cut(s)	349, 784, 846, 1096, 1465, 1675, 1726
BoxI	GACNNNNGTC	2 cut(s)	599, 1584
BpiI	GAAGAC	4 cut(s)	594, 755, 1301, 1450
BpmI	CTGGAG	1 cut(s)	1572
Bpu10I	CCTNAGC	1 cut(s)	1903
BpuMI	CCSGG	2 cut(s)	1472, 1584
Bsa29I	ATCGAT	1 cut(s)	1683
BsaAI	YACGTR	1 cut(s)	700
BsaBI	GATNNNNATC	1 cut(s)	438
BsaJI	CCNNGG	7 cut(s)	721, 1065, 1140, 1289, 1582, 1723, 1753
BsaXI	ACNNNNNCTCC	2 cut(s)	493, 523
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 369, 542, 659, 1368
Bse1I	ACTGG	2 cut(s)	493, 1182
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	2 cut(s)	516, 1515
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	3 cut(s)	1199, 1291, 1710
BseCI	ATCGAT	1 cut(s)	1683
BseDI	CCNNGG	7 cut(s)	721, 1065, 1140, 1289, 1582, 1723, 1753
BseGI	GGATG	4 cut(s)	48, 76, 604, 1480
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	5 cut(s)	313, 369, 542, 659, 1368
BseMI	GCAATG	2 cut(s)	516, 1515
BseMII	CTCAG	5 cut(s)	255, 290, 861, 1860, 1917
BseNI	ACTGG	2 cut(s)	493, 1182
BseXI	GCAGC	4 cut(s)	473, 692, 979, 1709
BsgI	GTGCAG	1 cut(s)	194
Bsh1236I	CGCG	2 cut(s)	723, 1464
Bsh1285I	CGRYCG	1 cut(s)	1683
BshFI	GGCC	2 cut(s)	165, 1722
BshNI	GGYRCC	1 cut(s)	896
BshVI	ATCGAT	1 cut(s)	1683
BsiEI	CGRYCG	1 cut(s)	1683
BsiHKAI	GWGCWC	1 cut(s)	277
BsiSI	CCGG	2 cut(s)	1472, 1584
BslFI	GGGAC	4 cut(s)	727, 1010, 1417, 1763
BslI	CCNNNNNNNGG	5 cut(s)	313, 369, 542, 659, 1368
BsmAI	GTCTC	2 cut(s)	1203, 1548
BsmFI	GGGAC	4 cut(s)	727, 1010, 1417, 1763
BsnI	GGCC	2 cut(s)	165, 1722
Bsp1286I	GDGCHC	2 cut(s)	277, 319
Bsp1407I	TGTACA	1 cut(s)	87
Bsp19I	CCATGG	2 cut(s)	1140, 1753
BspACI	CCGC	8 cut(s)	125, 721, 723, 783, 962, 1383, 1462, 1838
BspANI	GGCC	2 cut(s)	165, 1722
BspCNI	CTCAG	5 cut(s)	256, 289, 862, 1861, 1916
BspDI	ATCGAT	1 cut(s)	1683
BspFNI	CGCG	2 cut(s)	723, 1464
BspLI	GGNNCC	7 cut(s)	96, 424, 435, 898, 1026, 1665, 1751
BspMAI	CTGCAG	1 cut(s)	472
BspPI	GGATC	5 cut(s)	428, 441, 527, 579, 1300
BspT107I	GGYRCC	1 cut(s)	896
BspTI	CTTAAG	3 cut(s)	890, 902, 1984
BsrDI	GCAATG	2 cut(s)	516, 1515
BsrGI	TGTACA	1 cut(s)	87
BsrI	ACTGG	2 cut(s)	493, 1182
BssECI	CCNNGG	7 cut(s)	721, 1065, 1140, 1289, 1582, 1723, 1753
BssSI	CACGAG	1 cut(s)	1396
BssT1I	CCWWGG	4 cut(s)	1065, 1140, 1723, 1753
Bst2BI	CACGAG	1 cut(s)	1396
Bst2UI	CCWGG	3 cut(s)	1199, 1291, 1710
Bst4CI	ACNGT	6 cut(s)	109, 199, 745, 761, 820, 1942
Bst6I	CTCTTC	1 cut(s)	147
BstAFI	CTTAAG	3 cut(s)	890, 902, 1984
BstAPI	GCANNNNNTGC	4 cut(s)	467, 686, 1517, 1694
BstAUI	TGTACA	1 cut(s)	87
BstBAI	YACGTR	1 cut(s)	700
BstC8I	GCNNGC	4 cut(s)	783, 861, 1318, 1882
BstDEI	CTNAG	7 cut(s)	264, 276, 767, 870, 1415, 1869, 1903
BstDSI	CCRYGG	3 cut(s)	721, 1140, 1753
BstF5I	GGATG	4 cut(s)	48, 76, 604, 1480
BstFNI	CGCG	2 cut(s)	723, 1464
BstH2I	RGCGCY	2 cut(s)	255, 1422
BstHHI	GCGC	2 cut(s)	254, 1421
BstMAI	GTCTC	2 cut(s)	1203, 1548
BstMCI	CGRYCG	1 cut(s)	1683
BstMWI	GCNNNNNNNGC	8 cut(s)	467, 686, 1001, 1223, 1517, 1547, 1573, 1694
BstNI	CCWGG	3 cut(s)	1199, 1291, 1710
BstNSI	RCATGY	2 cut(s)	781, 863
BstPAI	GACNNNNGTC	2 cut(s)	599, 1584
BstSCI	CCNGG	5 cut(s)	1197, 1289, 1470, 1582, 1708
BstSFI	CTRYAG	2 cut(s)	468, 562
BstUI	CGCG	2 cut(s)	723, 1464
BstV1I	GCAGC	4 cut(s)	473, 692, 979, 1709
BstV2I	GAAGAC	4 cut(s)	594, 755, 1301, 1450
BstX2I	RGATCY	3 cut(s)	433, 532, 1305
BstXI	CCANNNNNNTGG	1 cut(s)	823
BstYI	RGATCY	3 cut(s)	433, 532, 1305
Bsu15I	ATCGAT	1 cut(s)	1683
Bsu36I	CCTNAGG	1 cut(s)	264
BsuRI	GGCC	2 cut(s)	165, 1722
BsuTUI	ATCGAT	1 cut(s)	1683
BtgI	CCRYGG	3 cut(s)	721, 1140, 1753
BtsCI	GGATG	4 cut(s)	48, 76, 604, 1480
BtsI	GCAGTG	1 cut(s)	235
Cac8I	GCNNGC	4 cut(s)	783, 861, 1318, 1882
CaiI	CAGNNNCTG	2 cut(s)	467, 1910
CfoI	GCGC	2 cut(s)	254, 1421
Cfr13I	GGNCC	5 cut(s)	94, 1024, 1359, 1586, 1750
Cfr42I	CCGCGG	1 cut(s)	724
ClaI	ATCGAT	1 cut(s)	1683
Csp6I	GTAC	3 cut(s)	88, 304, 897
CviAII	CATG	8 cut(s)	592, 778, 860, 1021, 1141, 1701, 1754, 1782
CviQI	GTAC	3 cut(s)	88, 304, 897
DdeI	CTNAG	7 cut(s)	264, 276, 767, 870, 1415, 1869, 1903
EaeI	YGGCCR	1 cut(s)	163
Eam1104I	CTCTTC	1 cut(s)	147
EarI	CTCTTC	1 cut(s)	147
Eco130I	CCWWGG	4 cut(s)	1065, 1140, 1723, 1753
Eco24I	GRGCYC	1 cut(s)	319
Eco47I	GGWCC	5 cut(s)	94, 1024, 1359, 1586, 1750
Eco47III	AGCGCT	2 cut(s)	253, 1420
Eco57I	CTGAAG	3 cut(s)	1271, 1470, 1744
Eco81I	CCTNAGG	1 cut(s)	264
EcoO109I	RGGNCCY	1 cut(s)	94
EcoRI	GAATTC	2 cut(s)	336, 1481
EcoRII	CCWGG	3 cut(s)	1197, 1289, 1708
EcoT14I	CCWWGG	4 cut(s)	1065, 1140, 1723, 1753
EcoT22I	ATGCAT	2 cut(s)	861, 1690
EcoT38I	GRGCYC	1 cut(s)	319
ErhI	CCWWGG	4 cut(s)	1065, 1140, 1723, 1753
FaeI	CATG	8 cut(s)	595, 781, 863, 1024, 1144, 1704, 1757, 1785
FalI	AAGNNNNNCTT	2 cut(s)	1916, 1948
FaqI	GGGAC	4 cut(s)	727, 1010, 1417, 1763
FatI	CATG	8 cut(s)	591, 777, 859, 1020, 1140, 1700, 1753, 1781
FauI	CCCGC	3 cut(s)	728, 790, 1845
FauNDI	CATATG	1 cut(s)	1537
FbaI	TGATCA	2 cut(s)	876, 1438
FblI	GTMKAC	1 cut(s)	1648
Fnu4HI	GCNGC	4 cut(s)	462, 681, 993, 1698
FokI	GGATG	4 cut(s)	55, 83, 611, 1487
FriOI	GRGCYC	1 cut(s)	319
Fsp4HI	GCNGC	4 cut(s)	462, 681, 993, 1698
FspBI	CTAG	5 cut(s)	320, 429, 1190, 1310, 1893
GlaI	GCGC	2 cut(s)	253, 1420
GluI	GCNGC	4 cut(s)	462, 681, 993, 1698
GsuI	CTGGAG	1 cut(s)	1572
HaeII	RGCGCY	2 cut(s)	255, 1422
HaeIII	GGCC	2 cut(s)	165, 1722
HapII	CCGG	2 cut(s)	1472, 1584
HhaI	GCGC	2 cut(s)	254, 1421
Hin1II	CATG	8 cut(s)	595, 781, 863, 1024, 1144, 1704, 1757, 1785
Hin6I	GCGC	2 cut(s)	252, 1419
HinP1I	GCGC	2 cut(s)	252, 1419
HincII	GTYRAC	2 cut(s)	202, 1899
HindII	GTYRAC	2 cut(s)	202, 1899
HindIII	AAGCTT	1 cut(s)	1981
HinfI	GANTC	5 cut(s)	11, 21, 492, 1119, 1871
HpaII	CCGG	2 cut(s)	1472, 1584
HphI	GGTGA	4 cut(s)	860, 1081, 1129, 1538
Hpy188I	TCNGA	8 cut(s)	115, 279, 482, 928, 989, 1098, 1115, 1790
Hpy188III	TCNNGA	3 cut(s)	263, 437, 1862
HpyAV	CCTTC	3 cut(s)	639, 1039, 1712
HpyCH4III	ACNGT	6 cut(s)	109, 199, 745, 761, 820, 1942
HpyCH4IV	ACGT	2 cut(s)	699, 1671
HpyF10VI	GCNNNNNNNGC	8 cut(s)	467, 686, 1001, 1223, 1517, 1547, 1573, 1694
HpyF3I	CTNAG	7 cut(s)	264, 276, 767, 870, 1415, 1869, 1903
HpySE526I	ACGT	2 cut(s)	699, 1671
Hsp92II	CATG	8 cut(s)	595, 781, 863, 1024, 1144, 1704, 1757, 1785
HspAI	GCGC	2 cut(s)	252, 1419
KpnI	GGTACC	1 cut(s)	900
Ksp22I	TGATCA	2 cut(s)	876, 1438
KspI	CCGCGG	1 cut(s)	724
LmnI	GCTCC	7 cut(s)	249, 259, 422, 458, 514, 1284, 1607
Lsp1109I	GCAGC	4 cut(s)	473, 692, 979, 1709
LweI	GCATC	7 cut(s)	349, 784, 846, 1096, 1465, 1675, 1726
MaeI	CTAG	5 cut(s)	320, 429, 1190, 1310, 1893
MaeII	ACGT	2 cut(s)	699, 1671
MaeIII	GTNAC	3 cut(s)	745, 1090, 1777
MflI	RGATCY	3 cut(s)	433, 532, 1305
MhlI	GDGCHC	2 cut(s)	277, 319
MlsI	TGGCCA	1 cut(s)	165
MluCI	AATT	8 cut(s)	280, 336, 996, 1008, 1078, 1083, 1333, 1481
MluNI	TGGCCA	1 cut(s)	165
MlyI	GAGTC	1 cut(s)	1880
MmeI	TCCRAC	2 cut(s)	657, 1337
Mox20I	TGGCCA	1 cut(s)	165
Mph1103I	ATGCAT	2 cut(s)	861, 1690
MscI	TGGCCA	1 cut(s)	165
MseI	TTAA	5 cut(s)	447, 891, 903, 909, 1985
MslI	CAYNNNNRTG	2 cut(s)	378, 821
Msp20I	TGGCCA	1 cut(s)	165
MspA1I	CMGCKG	3 cut(s)	723, 1433, 1550
MspCI	CTTAAG	3 cut(s)	890, 902, 1984
MspI	CCGG	2 cut(s)	1472, 1584
MspR9I	CCNGG	5 cut(s)	1199, 1291, 1472, 1584, 1710
MvaI	CCWGG	3 cut(s)	1199, 1291, 1710
MvnI	CGCG	2 cut(s)	723, 1464
MwoI	GCNNNNNNNGC	8 cut(s)	467, 686, 1001, 1223, 1517, 1547, 1573, 1694
NciI	CCSGG	2 cut(s)	1472, 1584
NcoI	CCATGG	2 cut(s)	1140, 1753
NdeI	CATATG	1 cut(s)	1537
NlaIII	CATG	8 cut(s)	595, 781, 863, 1024, 1144, 1704, 1757, 1785
NlaIV	GGNNCC	7 cut(s)	96, 424, 435, 898, 1026, 1665, 1751
NmuCI	GTSAC	2 cut(s)	745, 1090
NsiI	ATGCAT	2 cut(s)	861, 1690
NspI	RCATGY	2 cut(s)	781, 863
PaeI	GCATGC	1 cut(s)	863
PfeI	GAWTC	4 cut(s)	11, 21, 492, 1119
PflFI	GACNNNGTC	1 cut(s)	109
PflMI	CCANNNNNTGG	2 cut(s)	659, 1368
PkrI	GCNGC	4 cut(s)	463, 682, 994, 1699
Ple19I	CGATCG	1 cut(s)	1683
PleI	GAGTC	1 cut(s)	1879
PpsI	GAGTC	1 cut(s)	1879
Ppu21I	YACGTR	1 cut(s)	700
PpuMI	RGGWCCY	1 cut(s)	94
PshAI	GACNNNNGTC	2 cut(s)	599, 1584
Psp5II	RGGWCCY	1 cut(s)	94
Psp6I	CCWGG	3 cut(s)	1197, 1289, 1708
PspGI	CCWGG	3 cut(s)	1197, 1289, 1708
PspN4I	GGNNCC	7 cut(s)	96, 424, 435, 898, 1026, 1665, 1751
PspPI	GGNCC	5 cut(s)	94, 1024, 1359, 1586, 1750
PspPPI	RGGWCCY	1 cut(s)	94
PstI	CTGCAG	1 cut(s)	472
PstNI	CAGNNNCTG	2 cut(s)	467, 1910
PsuI	RGATCY	3 cut(s)	433, 532, 1305
PsyI	GACNNNGTC	1 cut(s)	109
PvuI	CGATCG	1 cut(s)	1683
PvuII	CAGCTG	2 cut(s)	1433, 1550
RsaI	GTAC	3 cut(s)	89, 305, 898
RsaNI	GTAC	3 cut(s)	88, 304, 897
RseI	CAYNNNNRTG	2 cut(s)	378, 821
SacII	CCGCGG	1 cut(s)	724
SaqAI	TTAA	5 cut(s)	447, 891, 903, 909, 1985
SatI	GCNGC	4 cut(s)	462, 681, 993, 1698
Sau96I	GGNCC	5 cut(s)	94, 1024, 1359, 1586, 1750
SchI	GAGTC	1 cut(s)	1880
ScrFI	CCNGG	5 cut(s)	1199, 1291, 1472, 1584, 1710
SduI	GDGCHC	2 cut(s)	277, 319
SfaNI	GCATC	7 cut(s)	349, 784, 846, 1096, 1465, 1675, 1726
SfcI	CTRYAG	2 cut(s)	468, 562
Sfr303I	CCGCGG	1 cut(s)	724
SgrBI	CCGCGG	1 cut(s)	724
SinI	GGWCC	5 cut(s)	94, 1024, 1359, 1586, 1750
SmiMI	CAYNNNNRTG	2 cut(s)	378, 821
SmlI	CTYRAG	3 cut(s)	890, 902, 1984
SmoI	CTYRAG	3 cut(s)	890, 902, 1984
SphI	GCATGC	1 cut(s)	863
Sse9I	AATT	8 cut(s)	280, 336, 996, 1008, 1078, 1083, 1333, 1481
SsiI	CCGC	8 cut(s)	125, 721, 723, 783, 962, 1383, 1462, 1838
SspMI	CTAG	5 cut(s)	320, 429, 1190, 1310, 1893
StyD4I	CCNGG	5 cut(s)	1197, 1289, 1470, 1582, 1708
StyI	CCWWGG	4 cut(s)	1065, 1140, 1723, 1753
TaaI	ACNGT	6 cut(s)	109, 199, 745, 761, 820, 1942
TaiI	ACGT	2 cut(s)	702, 1674
TaqI	TCGA	7 cut(s)	118, 474, 836, 942, 1493, 1679, 1683
TasI	AATT	8 cut(s)	280, 336, 996, 1008, 1078, 1083, 1333, 1481
TatI	WGTACW	1 cut(s)	87
TfiI	GAWTC	4 cut(s)	11, 21, 492, 1119
Tru1I	TTAA	5 cut(s)	447, 891, 903, 909, 1985
Tru9I	TTAA	5 cut(s)	447, 891, 903, 909, 1985
TseFI	GTSAC	2 cut(s)	745, 1090
TseI	GCWGC	4 cut(s)	461, 680, 992, 1697
Tsp45I	GTSAC	2 cut(s)	745, 1090
TspDTI	ATGAA	3 cut(s)	211, 819, 1474
TspGWI	ACGGA	3 cut(s)	611, 660, 973
Tth111I	GACNNNGTC	1 cut(s)	109
Van91I	CCANNNNNTGG	2 cut(s)	659, 1368
Vha464I	CTTAAG	3 cut(s)	890, 902, 1984
VpaK11BI	GGWCC	5 cut(s)	94, 1024, 1359, 1586, 1750
XapI	RAATTY	2 cut(s)	336, 1481
XceI	RCATGY	2 cut(s)	781, 863
XcmI	CCANNNNNNNNNTGG	2 cut(s)	697, 1760
XmiI	GTMKAC	1 cut(s)	1648
XspI	CTAG	5 cut(s)	320, 429, 1190, 1310, 1893
Zsp2I	ATGCAT	2 cut(s)	861, 1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.