Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Reverse (-)

2178430 .. 2182425

Gene Structure 3996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00388850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGATGCCTGTCTCCTTGACGAGGGGGCTTCTTCTGTTATGCTTGTGTATAGCAGCGGCGACGATGAGAACAGCAGAAGCAGCAGGTGGAGGAGGATACATGAAATATAAGGACCCCAAACAGCCCTTGAATACTAGAATCAATGACCTACTGAGCCGGATGACTTTGGAGGAAAAGATTGGCCAGATGACGCAGATAGACCGCAGTGTTGCTTCAGCTGAGGTCATGAACAAGTACTACATTGGGAGTGTCTTGAGCGGCGGTGGGAGTGTGCCATCAAAACAAGCTTCTGCAGAGACTTGGGTTACAATGGTGAATGGTTTTCAAATGGGTTCTCTATCAACTCGCCTCGGTATTCCAATGATTTATGGTATTGATGCTGTTCATGGCCACAATAATGTCTACAAGGCAACAATCTTTCCCCACAATGTTGGCCTCGGAGCTACCAGGGACCCTGAGCTTGTTAAGAAGATTGGAGCTGCAACTGCACTTGAAGTTAGAGCCACAGGCATTCCATATGTCTTTGCACCTTGCATAGCGGTTTGTAGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTATAGTGAAGATCATAAGGTTGTTCAAGCAATGACTCGGATCATACCTGGATTACAAGGAGATATACCACCTAACTCTAGAAAGGGTGTTCCCTTTATAGCCGCTGGAAATAAAAAGGTTGCAGCTTGTGCAAAGCATTATGTGGGCGATGGTGGAACAACCAAAGGCATCAATGAGAATAACACTGTGATAAACAGGCATGGATTGCTCAGCATTCACATGCCAGCCTACTATAACTCAATTATCGAAGGTGTTGCAACCATTATGGTATCTTACTCCAGCTGGAATGGAGTCAAGATGCATGCTAACCGTGATCTGGTCACTGGCTTTCTTAAGAATACTCTCCGTTTCAGGGGTTTTGTCATCTCAGATTGGGAGGGTATTGACAGAATCACCTCACCACCTCATGCCAACTACTCATACTCGATTACAGCAGGGATCAATGCTGGCATTGACATGATCATGGTTCCATACAACTATACAGAATTCATTGATGGTCTAACTTTCCAGGCAAAAAATAAAATCATTCCCATGAGCAGAATTGATGATGCAGTGAGGAGAATTTTGCGGGTTAAGTTTATAATGGGGCTATTTGAGAATCCGTTGGCTGATCTCAGCCTCGTCAACCAGCTTGGCAGTCAGGAACACAGAGACTTGGCTCGGGAAGCTGTGAGGCGATCGTTAGTTCTTCTAAAGAATGGTGAATCTGCAGACAAGCCATTGCTACCCCTTCCCAAGAAGACATCAAAAATACTTGTAGCTGGAAGTCATGCAGACAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGATTGAGCGGCAACAATCTCACACATGGTACCACAATCCTAACCGGTATAAAGAACACAGTTGATCCAGAAACCGAAGTGGTGTATAAGGAGAATCCTAATGCGGAGTATGTTAAGTCAAATGATTTCTCCTATGCCATCGTTGTCATAGGAGAACCACCATATGCGGAGACATTTGGTGACAGTTTAAATTTGACTCTCCCTGATGCGGGCCTTAAAACCATTACAAATGTTTGTGGTGCTGTGAAGTGTGTTGTCATCGTCATCTCCGGTCGTCCTGTTGTGATCCAACCATATGTTCCCCTGCTAGATGCTCTGGTTGCGGCGTGGCTTCCAGGAAGTGAGGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGATTATGGTTTCACCGGCAAGCTTTCTCGCACTTGGTTTAAAACGGTTGATCAGCTACCTATGAATGTTGGAGATCCACATTATGACCCTCTCTTCCCCTTTGGATTTGGCCTGACAACAACACCCACCAAAGCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0042597 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

637

Amino Acids

69.23

Weight (kDa)

8.63

Isoelectric Point (pI)

31.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	55 - 384	2.6e-67	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	421 - 630	1e-38	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1160
AarI	CACCTGC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	74
Acc65I	GGTACC	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	1427
AccB7I	CCANNNNNTGG	1 cut(s)	1392
AccBSI	CCGCTC	2 cut(s)	258, 1407
AccI	GTMKAC	1 cut(s)	402
AclWI	GGATC	6 cut(s)	545, 626, 1025, 1457, 1678, 1841
AcoI	YGGCCR	2 cut(s)	181, 388
AcsI	RAATTY	3 cut(s)	1064, 1140, 1588
AcuI	CTGAAG	1 cut(s)	198
AfaI	GTAC	2 cut(s)	236, 1429
AfiI	CCNNNNNNNGG	7 cut(s)	21, 560, 895, 931, 1392, 1606, 1607
AflII	CTTAAG	1 cut(s)	911
AgeI	ACCGGT	1 cut(s)	1442
AgsI	TTSAA	4 cut(s)	130, 326, 494, 605
AjnI	CCWGG	4 cut(s)	446, 625, 1086, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	1680, 1712
Alw26I	GTCTC	4 cut(s)	16, 290, 1224, 1562
AlwI	GGATC	6 cut(s)	545, 626, 1025, 1457, 1678, 1841
Ama87I	CYCGRG	1 cut(s)	1239
AoxI	GGCC	6 cut(s)	181, 388, 433, 1609, 1744, 1882
ApeKI	GCWGC	4 cut(s)	53, 80, 479, 701
ApoI	RAATTY	3 cut(s)	1064, 1140, 1588
AsiGI	ACCGGT	1 cut(s)	1442
Asp718I	GGTACC	1 cut(s)	1427
AspS9I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
AsuHPI	GGTGA	7 cut(s)	325, 964, 969, 1292, 1589, 1777, 1784
AvaI	CYCGRG	1 cut(s)	1239
AvaII	GGWCC	3 cut(s)	112, 451, 1383
BalI	TGGCCA	2 cut(s)	183, 390
BanI	GGYRCC	1 cut(s)	1427
BbsI	GAAGAC	1 cut(s)	1325
BbvCI	CCTCAGC	1 cut(s)	219
BbvI	GCAGC	4 cut(s)	65, 92, 466, 713
BccI	CCATC	5 cut(s)	283, 552, 722, 1067, 1544
BcgI	CGANNNNNNTGC	2 cut(s)	815, 849
BciT130I	CCWGG	4 cut(s)	448, 627, 1088, 1734
BciVI	GTATCC	1 cut(s)	89
BclI	TGATCA	2 cut(s)	1038, 1822
BcoDI	GTCTC	4 cut(s)	16, 290, 1224, 1562
BfaI	CTAG	4 cut(s)	135, 657, 1706, 1912
BfmI	CTRYAG	3 cut(s)	291, 580, 1287
BfrI	CTTAAG	1 cut(s)	911
BfuAI	ACCTGC	1 cut(s)	74
BfuI	GTATCC	1 cut(s)	89
BisI	GCNGC	9 cut(s)	54, 57, 81, 259, 480, 681, 702, 1408, 1722
BlpI	GCTNAGC	1 cut(s)	788
BlsI	GCNGC	9 cut(s)	55, 58, 82, 260, 481, 682, 703, 1409, 1723
BmcAI	AGTACT	1 cut(s)	236
Bme1390I	CCNGG	4 cut(s)	448, 627, 1088, 1734
Bme18I	GGWCC	3 cut(s)	112, 451, 1383
BmeT110I	CYCGRG	1 cut(s)	1239
BmgT120I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
BmiI	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
BmrFI	CCNGG	4 cut(s)	448, 627, 1088, 1734
BmsI	GCATC	6 cut(s)	367, 756, 867, 1117, 1594, 1699
BpiI	GAAGAC	1 cut(s)	1325
BpmI	CTGGAG	1 cut(s)	841
Bpu10I	CCTNAGC	2 cut(s)	219, 456
Bpu1102I	GCTNAGC	1 cut(s)	788
BpuEI	CTTGAG	1 cut(s)	274
BsaJI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BsaWI	WCCGGW	2 cut(s)	1442, 1667
Bsc4I	CCNNNNNNNGG	7 cut(s)	21, 560, 895, 931, 1392, 1606, 1607
Bse118I	RCCGGY	2 cut(s)	1442, 1787
Bse1I	ACTGG	1 cut(s)	907
Bse3DI	GCAATG	2 cut(s)	615, 1298
BseBI	CCWGG	4 cut(s)	448, 627, 1088, 1734
BseDI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BseGI	GGATG	1 cut(s)	165
BseLI	CCNNNNNNNGG	7 cut(s)	21, 560, 895, 931, 1392, 1606, 1607
BseMI	GCAATG	2 cut(s)	615, 1298
BseMII	CTCAG	6 cut(s)	143, 210, 447, 802, 960, 1207
BseNI	ACTGG	1 cut(s)	907
BseRI	GAGGAG	2 cut(s)	105, 1150
BseXI	GCAGC	4 cut(s)	65, 92, 466, 713
BsgI	GTGCAG	1 cut(s)	471
Bsh1285I	CGRYCG	2 cut(s)	1259, 1672
BshFI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BshNI	GGYRCC	1 cut(s)	1427
BshTI	ACCGGT	1 cut(s)	1442
BsiEI	CGRYCG	2 cut(s)	1259, 1672
BsiHKCI	CYCGRG	1 cut(s)	1239
BsiSI	CCGG	4 cut(s)	157, 1443, 1668, 1788
BslFI	GGGAC	1 cut(s)	464
BslI	CCNNNNNNNGG	7 cut(s)	21, 560, 895, 931, 1392, 1606, 1607
BsmAI	GTCTC	4 cut(s)	16, 290, 1224, 1562
BsmFI	GGGAC	1 cut(s)	464
BsmI	GAATGC	2 cut(s)	510, 792
BsnI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BsoBI	CYCGRG	1 cut(s)	1239
Bsp1720I	GCTNAGC	1 cut(s)	788
BspANI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BspCNI	CTCAG	6 cut(s)	144, 211, 448, 801, 959, 1206
BspHI	TCATGA	1 cut(s)	225
BspLI	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
BspMAI	CTGCAG	2 cut(s)	295, 1291
BspMI	ACCTGC	1 cut(s)	74
BspPI	GGATC	6 cut(s)	545, 626, 1025, 1457, 1678, 1841
BspT107I	GGYRCC	1 cut(s)	1427
BspTI	CTTAAG	1 cut(s)	911
BsrBI	CCGCTC	2 cut(s)	258, 1407
BsrDI	GCAATG	2 cut(s)	615, 1298
BsrFI	RCCGGY	2 cut(s)	1442, 1787
BsrI	ACTGG	1 cut(s)	907
BssAI	RCCGGY	2 cut(s)	1442, 1787
BssECI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BssT1I	CCWWGG	1 cut(s)	1747
Bst2UI	CCWGG	4 cut(s)	448, 627, 1088, 1734
Bst4CI	ACNGT	5 cut(s)	766, 890, 1459, 1583, 1819
Bst6I	CTCTTC	1 cut(s)	1871
BstAFI	CTTAAG	1 cut(s)	911
BstAPI	GCANNNNNTGC	2 cut(s)	707, 784
BstC8I	GCNNGC	5 cut(s)	804, 882, 1027, 1609, 1793
BstDEI	CTNAG	6 cut(s)	152, 219, 456, 788, 946, 1193
BstENI	CCTNNNNNAGG	1 cut(s)	19
BstF5I	GGATG	1 cut(s)	165
BstMAI	GTCTC	4 cut(s)	16, 290, 1224, 1562
BstMCI	CGRYCG	2 cut(s)	1259, 1672
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 485, 707, 784, 1244, 1718
BstNI	CCWGG	4 cut(s)	448, 627, 1088, 1734
BstNSI	RCATGY	2 cut(s)	802, 884
BstSCI	CCNGG	4 cut(s)	446, 625, 1086, 1732
BstSFI	CTRYAG	3 cut(s)	291, 580, 1287
BstV1I	GCAGC	4 cut(s)	65, 92, 466, 713
BstV2I	GAAGAC	1 cut(s)	1325
BstX2I	RGATCY	2 cut(s)	550, 1846
BstXI	CCANNNNNNTGG	1 cut(s)	431
BstYI	RGATCY	2 cut(s)	550, 1846
BsuI	GTATCC	1 cut(s)	89
BsuRI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BtgZI	GCGATG	1 cut(s)	741
BtsCI	GGATG	1 cut(s)	165
BtsI	GCAGTG	2 cut(s)	211, 1137
BtsIMutI	CAGTG	5 cut(s)	211, 762, 900, 1137, 1376
BveI	ACCTGC	1 cut(s)	74
Cac8I	GCNNGC	5 cut(s)	804, 882, 1027, 1609, 1793
CciI	TCATGA	1 cut(s)	225
Cfr10I	RCCGGY	2 cut(s)	1442, 1787
Cfr13I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
CseI	GACGC	1 cut(s)	199
Csp6I	GTAC	2 cut(s)	235, 1428
CspAI	ACCGGT	1 cut(s)	1442
CviQI	GTAC	2 cut(s)	235, 1428
DdeI	CTNAG	6 cut(s)	152, 219, 456, 788, 946, 1193
DraI	TTTAAA	2 cut(s)	1587, 1813
EaeI	YGGCCR	2 cut(s)	181, 388
Eam1104I	CTCTTC	1 cut(s)	1871
EarI	CTCTTC	1 cut(s)	1871
Eco130I	CCWWGG	1 cut(s)	1747
Eco47I	GGWCC	3 cut(s)	112, 451, 1383
Eco57I	CTGAAG	1 cut(s)	198
Eco88I	CYCGRG	1 cut(s)	1239
EcoNI	CCTNNNNNAGG	1 cut(s)	19
EcoO109I	RGGNCCY	2 cut(s)	112, 451
EcoRI	GAATTC	1 cut(s)	1064
EcoRII	CCWGG	4 cut(s)	446, 625, 1086, 1732
EcoT14I	CCWWGG	1 cut(s)	1747
EcoT22I	ATGCAT	1 cut(s)	882
ErhI	CCWWGG	1 cut(s)	1747
FaqI	GGGAC	1 cut(s)	464
FauI	CCCGC	2 cut(s)	1140, 1600
FauNDI	CATATG	3 cut(s)	517, 1561, 1693
FbaI	TGATCA	2 cut(s)	1038, 1822
FblI	GTMKAC	1 cut(s)	402
Fnu4HI	GCNGC	9 cut(s)	54, 57, 81, 259, 480, 681, 702, 1408, 1722
FokI	GGATG	1 cut(s)	172
Fsp4HI	GCNGC	9 cut(s)	54, 57, 81, 259, 480, 681, 702, 1408, 1722
FspBI	CTAG	4 cut(s)	135, 657, 1706, 1912
GluI	GCNGC	9 cut(s)	54, 57, 81, 259, 480, 681, 702, 1408, 1722
GsuI	CTGGAG	1 cut(s)	841
HaeIII	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
HapII	CCGG	4 cut(s)	157, 1443, 1668, 1788
HgaI	GACGC	1 cut(s)	199
HincII	GTYRAC	1 cut(s)	1204
HindII	GTYRAC	1 cut(s)	1204
HindIII	AAGCTT	2 cut(s)	285, 1793
HinfI	GANTC	8 cut(s)	138, 613, 870, 969, 1177, 1283, 1492, 1594
HpaII	CCGG	4 cut(s)	157, 1443, 1668, 1788
HphI	GGTGA	7 cut(s)	325, 964, 969, 1292, 1589, 1777, 1784
Hpy166II	GTNNAC	2 cut(s)	403, 1204
Hpy188I	TCNGA	3 cut(s)	440, 618, 949
Hpy188III	TCNNGA	7 cut(s)	226, 253, 657, 874, 1220, 1241, 1466
Hpy8I	GTNNAC	2 cut(s)	403, 1204
Hpy99I	CGWCG	1 cut(s)	64
HpyAV	CCTTC	2 cut(s)	821, 1319
HpyCH4III	ACNGT	5 cut(s)	766, 890, 1459, 1583, 1819
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 485, 707, 784, 1244, 1718
HpyF3I	CTNAG	6 cut(s)	152, 219, 456, 788, 946, 1193
KflI	GGGWCCC	1 cut(s)	451
KpnI	GGTACC	1 cut(s)	1431
Ksp22I	TGATCA	2 cut(s)	1038, 1822
LmnI	GCTCC	2 cut(s)	440, 476
Lsp1109I	GCAGC	4 cut(s)	65, 92, 466, 713
LweI	GCATC	6 cut(s)	367, 756, 867, 1117, 1594, 1699
MaeI	CTAG	4 cut(s)	135, 657, 1706, 1912
MaeIII	GTNAC	4 cut(s)	304, 569, 898, 1577
MbiI	CCGCTC	2 cut(s)	258, 1407
MboII	GAAGA	6 cut(s)	23, 481, 599, 1259, 1330, 1858
MflI	RGATCY	2 cut(s)	550, 1846
MlsI	TGGCCA	2 cut(s)	183, 390
MluCI	AATT	5 cut(s)	819, 1064, 1119, 1140, 1588
MluNI	TGGCCA	2 cut(s)	183, 390
MlyI	GAGTC	3 cut(s)	607, 879, 1588
MmeI	TCCRAC	3 cut(s)	1361, 1711, 1822
Mox20I	TGGCCA	2 cut(s)	183, 390
Mph1103I	ATGCAT	1 cut(s)	882
MscI	TGGCCA	2 cut(s)	183, 390
MseI	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
MslI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
Msp20I	TGGCCA	2 cut(s)	183, 390
MspA1I	CMGCKG	4 cut(s)	56, 218, 683, 861
MspCI	CTTAAG	1 cut(s)	911
MspI	CCGG	4 cut(s)	157, 1443, 1668, 1788
MspR9I	CCNGG	4 cut(s)	448, 627, 1088, 1734
Mva1269I	GAATGC	2 cut(s)	510, 792
MvaI	CCWGG	4 cut(s)	448, 627, 1088, 1734
MwoI	GCNNNNNNNGC	6 cut(s)	80, 485, 707, 784, 1244, 1718
NdeI	CATATG	3 cut(s)	517, 1561, 1693
NlaIV	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
NmuCI	GTSAC	2 cut(s)	898, 1577
NsiI	ATGCAT	1 cut(s)	882
NspI	RCATGY	2 cut(s)	802, 884
PaeI	GCATGC	1 cut(s)	884
PagI	TCATGA	1 cut(s)	225
PaqCI	CACCTGC	1 cut(s)	74
PctI	GAATGC	2 cut(s)	510, 792
PfeI	GAWTC	5 cut(s)	138, 969, 1177, 1283, 1492
PflMI	CCANNNNNTGG	1 cut(s)	1392
PfoI	TCCNGGA	1 cut(s)	1732
PinAI	ACCGGT	1 cut(s)	1442
PkrI	GCNGC	9 cut(s)	55, 58, 82, 260, 481, 682, 703, 1409, 1723
Ple19I	CGATCG	1 cut(s)	1259
PleI	GAGTC	3 cut(s)	607, 878, 1588
PpsI	GAGTC	3 cut(s)	607, 878, 1588
PpuMI	RGGWCCY	2 cut(s)	112, 451
PsiI	TTATAA	1 cut(s)	1160
Psp5II	RGGWCCY	2 cut(s)	112, 451
Psp6I	CCWGG	4 cut(s)	446, 625, 1086, 1732
PspGI	CCWGG	4 cut(s)	446, 625, 1086, 1732
PspN4I	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
PspPI	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
PspPPI	RGGWCCY	2 cut(s)	112, 451
PsrI	GAACNNNNNNTAC	2 cut(s)	221, 253
PstI	CTGCAG	2 cut(s)	295, 1291
PsuI	RGATCY	2 cut(s)	550, 1846
PvuI	CGATCG	1 cut(s)	1259
PvuII	CAGCTG	2 cut(s)	218, 861
RsaI	GTAC	2 cut(s)	236, 1429
RsaNI	GTAC	2 cut(s)	235, 1428
RseI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
SaqAI	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
SatI	GCNGC	9 cut(s)	54, 57, 81, 259, 480, 681, 702, 1408, 1722
Sau96I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
ScaI	AGTACT	1 cut(s)	236
SchI	GAGTC	3 cut(s)	607, 879, 1588
ScrFI	CCNGG	4 cut(s)	448, 627, 1088, 1734
SfaNI	GCATC	6 cut(s)	367, 756, 867, 1117, 1594, 1699
SfcI	CTRYAG	3 cut(s)	291, 580, 1287
SinI	GGWCC	3 cut(s)	112, 451, 1383
SmiMI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
SmlI	CTYRAG	2 cut(s)	253, 911
SmoI	CTYRAG	2 cut(s)	253, 911
SphI	GCATGC	1 cut(s)	884
Sse9I	AATT	5 cut(s)	819, 1064, 1119, 1140, 1588
SspMI	CTAG	4 cut(s)	135, 657, 1706, 1912
StyD4I	CCNGG	4 cut(s)	446, 625, 1086, 1732
StyI	CCWWGG	1 cut(s)	1747
TaaI	ACNGT	5 cut(s)	766, 890, 1459, 1583, 1819
TaqI	TCGA	2 cut(s)	825, 1004
TasI	AATT	5 cut(s)	819, 1064, 1119, 1140, 1588
TatI	WGTACW	1 cut(s)	234
TauI	GCSGC	5 cut(s)	59, 261, 683, 1410, 1724
TfiI	GAWTC	5 cut(s)	138, 969, 1177, 1283, 1492
Tru1I	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
Tru9I	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
TscAI	CASTG	5 cut(s)	211, 769, 907, 1137, 1376
TseFI	GTSAC	2 cut(s)	898, 1577
TseI	GCWGC	4 cut(s)	53, 80, 479, 701
Tsp45I	GTSAC	2 cut(s)	898, 1577
TspDTI	ATGAA	5 cut(s)	116, 242, 374, 1057, 1850
TspGWI	ACGGA	2 cut(s)	914, 1170
TspRI	CASTG	5 cut(s)	211, 769, 907, 1137, 1376
Van91I	CCANNNNNTGG	1 cut(s)	1392
Vha464I	CTTAAG	1 cut(s)	911
VpaK11BI	GGWCC	3 cut(s)	112, 451, 1383
XagI	CCTNNNNNAGG	1 cut(s)	19
XapI	RAATTY	3 cut(s)	1064, 1140, 1588
XbaI	TCTAGA	1 cut(s)	656
XceI	RCATGY	2 cut(s)	802, 884
XmiI	GTMKAC	1 cut(s)	402
XspI	CTAG	4 cut(s)	135, 657, 1706, 1912
ZrmI	AGTACT	1 cut(s)	236
Zsp2I	ATGCAT	1 cut(s)	882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.