Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Reverse (-)

56043731 .. 56046451

Gene Structure 2721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00375200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGACCTTGGAGGACAAGATTGGCCAAATGACGCAGATAGACCGCAGTGTTGCTTCACCTGAGGTGATGTACAAGTACAAGATTGGGAGTGTTTTGAGTGGGGGTGGGAGTGTGCCAGCAAAAAAGGCTTATGCAGAAACTTGGATTAGAATGGTGAATGATTTTCAAAACGGATCTTTATCGACTCGGCTTGCCATTCCACTGATTTATGGTGTTGATGCTATTCATGGCCACAACAATGTCTACAAGGCGACAGTCTTTCCTCACAATATTGGACTGGGAGCTACCAGGCAACTTCCATCAAACTCTCAATCCACCTGGGACCCTGAACTTGTTAAGAGGATAGGAGCTGCAACCGCGCTTGAAGTTAGAGCTACAGGAATCCATTATACCTTTGCACCTTGTGTAGCGGTTTGTGGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTACAGTGAAGATCCTAAGCTTGTTCAAGCAATGACTGAGATCATACCTGGATTACAAGGAGAGATACCAGTTAACTCTAGAAAGGGTGTTCCCTATGTAGCAGGAAAGTTGCAGCTTGTGAAAAGCATTATGTGGGAGATGGTGGAACAATCATGGGCATCAATGAGAATAACACTGATAGATAGACATGGTTTACTGAGCATTCACATGCCACCCTACTCCAGTGCAATTATCAAGGGTGTTGCAACCATTATGGTATCTTACTCGAGCTGGAATGGAGTAAAGATGCATGCTAATCATGAACTTATCACCGACTTCCTTAAGGGTACTCTCGGTTTCAAGGGTATTGTCATCTCAGATTGGCAGGGTATTGACATGATCACCTCTCCCCCTAATGCCAATTACTCATACTCAATTATGAAAGGAATCAGTGCTGGCATTGATATGATCATGGTTCCATACAACTATACAGAATTCATCAAGGGTCTAACTTTCCATGTGAAAAATAAAATCATCCCCATGAGCAGAATTGACGATGCTGTGAAGAGAATTTTGCGGGTTAAGTTTACAATGGGGCTATTTGAGAAACCGTTGGCTGATCTCAGACTGGTCAACCAGCTTGGCAGTCAGCCATTGCTACCCCTTCCCAAGAAGACGTCAAAAATTCTTGTAGCTGGAAGTCATGCAGATAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGACTAAGTGGCAACAACCTCACACAAGGTACCACAATTCTAACTGCCATAAGGAACACAGCTGCACCTGAATTTAAAGTAGTGTACAAGGAGAATCCTGATGCCAAGTTTGTGAAGTCCAATAATTTCTCCCATGCCATCGTTATGGTAGGAGAGCCACCCTATGCCGAGGGAGCTGGTGACAACCTAAACGTAACAGTCCCTAAATCTGGCCGAAGAGTCATCAGAAATGTTTGCGGTGCAGCAAAATTTGTTGTTTGCCTCATCACCGGCCGTCCTGTAATGATCAAACCATATCTTTCCATCATAGATACTCTTGTTGCAGCTTGGCTTCCAGGGACTGAAGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGACTATGGCTTCAATGGCAAGCTTCCTCGCACCTGGTTCAGAACCGCTCATCAGCTGCCTATGAATGTTAGAGATCCACATTATGATCCTCTCTTCCCTTATGGATATGGCCTCACTACACAACCCACCAAAGCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005623 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0042597 GO:0043170 GO:0044042 GO:0044238 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

565

Amino Acids

62.16

Weight (kDa)

9.28

Isoelectric Point (pI)

31.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	2 - 337	3.6e-62	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	360 - 558	3.9e-34	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1109
Acc65I	GGTACC	1 cut(s)	1211
AccB1I	GGYRCC	1 cut(s)	1211
AccB7I	CCANNNNNTGG	1 cut(s)	1176
AccBSI	CCGCTC	1 cut(s)	1604
AccI	GTMKAC	1 cut(s)	243
AccII	CGCG	1 cut(s)	359
AciI	CCGC	6 cut(s)	43, 357, 410, 1006, 1419, 1602
AclWI	GGATC	5 cut(s)	181, 416, 455, 1625, 1637
AcoI	YGGCCR	4 cut(s)	22, 229, 1393, 1453
AcsI	RAATTY	5 cut(s)	923, 999, 1113, 1253, 1430
AcuI	CTGAAG	1 cut(s)	1545
AcyI	GRCGYC	1 cut(s)	1106
AdeI	CACNNNGTG	1 cut(s)	404
AfaI	GTAC	5 cut(s)	71, 77, 778, 1213, 1268
AfiI	CCNNNNNNNGG	3 cut(s)	431, 1176, 1391
AflII	CTTAAG	1 cut(s)	770
AgsI	TTSAA	5 cut(s)	167, 365, 476, 790, 1570
AjnI	CCWGG	5 cut(s)	287, 317, 496, 1516, 1589
AlwI	GGATC	5 cut(s)	181, 416, 455, 1625, 1637
AlwNI	CAGNNNCTG	1 cut(s)	1523
Ama87I	CYCGRG	1 cut(s)	715
AoxI	GGCC	6 cut(s)	22, 229, 1393, 1453, 1528, 1666
ApeKI	GCWGC	6 cut(s)	350, 562, 1244, 1424, 1505, 1612
ApoI	RAATTY	5 cut(s)	923, 999, 1113, 1253, 1430
Asp718I	GGTACC	1 cut(s)	1211
AspLEI	GCGC	1 cut(s)	361
AspS9I	GGNCC	2 cut(s)	322, 1167
AsuHPI	GGTGA	8 cut(s)	48, 76, 166, 751, 823, 1373, 1441, 1568
AvaI	CYCGRG	1 cut(s)	715
AvaII	GGWCC	2 cut(s)	322, 1167
AxyI	CCTNAGG	1 cut(s)	60
BaeI	ACNNNNGTAYC	2 cut(s)	1485, 1518
BalI	TGGCCA	2 cut(s)	24, 231
BanI	GGYRCC	1 cut(s)	1211
BbsI	GAAGAC	1 cut(s)	1109
BbvI	GCAGC	6 cut(s)	337, 574, 1231, 1436, 1517, 1599
BccI	CCATC	5 cut(s)	307, 423, 583, 1328, 1493
BceAI	ACGGC	1 cut(s)	1440
BciT130I	CCWGG	5 cut(s)	289, 319, 498, 1518, 1591
BclI	TGATCA	3 cut(s)	828, 897, 1467
BfaI	CTAG	2 cut(s)	528, 1696
BfmI	CTRYAG	2 cut(s)	375, 451
BfrI	CTTAAG	1 cut(s)	770
BisI	GCNGC	6 cut(s)	351, 563, 1245, 1425, 1506, 1613
BlsI	GCNGC	6 cut(s)	352, 564, 1246, 1426, 1507, 1614
Bme1390I	CCNGG	5 cut(s)	289, 319, 498, 1518, 1591
Bme18I	GGWCC	2 cut(s)	322, 1167
BmeT110I	CYCGRG	1 cut(s)	715
BmgT120I	GGNCC	2 cut(s)	322, 1167
BmiI	GGNNCC	4 cut(s)	323, 324, 906, 1213
BmrFI	CCNGG	5 cut(s)	289, 319, 498, 1518, 1591
BmrI	ACTGGG	1 cut(s)	287
BmsI	GCATC	5 cut(s)	208, 617, 726, 976, 1273
BmuI	ACTGGG	1 cut(s)	287
BpiI	GAAGAC	1 cut(s)	1109
BpmI	CTGGAG	1 cut(s)	655
Bpu10I	CCTNAGC	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	178
BsaHI	GRCGYC	1 cut(s)	1106
BsaJI	CCNNGG	5 cut(s)	6, 318, 1350, 1517, 1531
Bsc4I	CCNNNNNNNGG	3 cut(s)	431, 1176, 1391
Bse118I	RCCGGY	1 cut(s)	1451
Bse1I	ACTGG	4 cut(s)	282, 518, 672, 1062
Bse21I	CCTNAGG	1 cut(s)	60
Bse3DI	GCAATG	2 cut(s)	486, 1082
Bse8I	GATNNNNATC	1 cut(s)	178
BseBI	CCWGG	5 cut(s)	289, 319, 498, 1518, 1591
BseDI	CCNNGG	5 cut(s)	6, 318, 1350, 1517, 1531
BseGI	GGATG	1 cut(s)	963
BseJI	GATNNNNATC	1 cut(s)	178
BseLI	CCNNNNNNNGG	3 cut(s)	431, 1176, 1391
BseMI	GCAATG	2 cut(s)	486, 1082
BseMII	CTCAG	5 cut(s)	51, 477, 638, 819, 1066
BseNI	ACTGG	4 cut(s)	282, 518, 672, 1062
BseX3I	CGGCCG	1 cut(s)	1453
BseXI	GCAGC	6 cut(s)	337, 574, 1231, 1436, 1517, 1599
BsgI	GTGCAG	2 cut(s)	1230, 1443
Bsh1236I	CGCG	1 cut(s)	359
Bsh1285I	CGRYCG	1 cut(s)	1456
BshFI	GGCC	6 cut(s)	24, 231, 1395, 1455, 1530, 1668
BshNI	GGYRCC	1 cut(s)	1211
BsiEI	CGRYCG	1 cut(s)	1456
BsiHKCI	CYCGRG	1 cut(s)	715
BsiSI	CCGG	1 cut(s)	1452
BslFI	GGGAC	4 cut(s)	335, 1197, 1367, 1534
BslI	CCNNNNNNNGG	3 cut(s)	431, 1176, 1391
BsmFI	GGGAC	4 cut(s)	335, 1197, 1367, 1534
BsmI	GAATGC	1 cut(s)	651
BsnI	GGCC	6 cut(s)	24, 231, 1395, 1455, 1530, 1668
BsoBI	CYCGRG	1 cut(s)	715
Bsp1407I	TGTACA	2 cut(s)	69, 1266
BspACI	CCGC	6 cut(s)	43, 357, 410, 1006, 1419, 1602
BspANI	GGCC	6 cut(s)	24, 231, 1395, 1455, 1530, 1668
BspCNI	CTCAG	5 cut(s)	52, 478, 639, 818, 1065
BspFNI	CGCG	1 cut(s)	359
BspHI	TCATGA	1 cut(s)	748
BspLI	GGNNCC	4 cut(s)	323, 324, 906, 1213
BspPI	GGATC	5 cut(s)	181, 416, 455, 1625, 1637
BspT107I	GGYRCC	1 cut(s)	1211
BspTI	CTTAAG	1 cut(s)	770
BsrBI	CCGCTC	1 cut(s)	1604
BsrDI	GCAATG	2 cut(s)	486, 1082
BsrFI	RCCGGY	1 cut(s)	1451
BsrGI	TGTACA	2 cut(s)	69, 1266
BsrI	ACTGG	4 cut(s)	282, 518, 672, 1062
BssAI	RCCGGY	1 cut(s)	1451
BssECI	CCNNGG	5 cut(s)	6, 318, 1350, 1517, 1531
BssNI	GRCGYC	1 cut(s)	1106
BssT1I	CCWWGG	2 cut(s)	6, 1531
Bst2UI	CCWGG	5 cut(s)	289, 319, 498, 1518, 1591
Bst4CI	ACNGT	4 cut(s)	256, 455, 1041, 1381
Bst6I	CTCTTC	3 cut(s)	989, 1393, 1655
BstACI	GRCGYC	1 cut(s)	1106
BstAFI	CTTAAG	1 cut(s)	770
BstAUI	TGTACA	2 cut(s)	69, 1266
BstC8I	GCNNGC	5 cut(s)	117, 192, 741, 886, 1577
BstDEI	CTNAG	7 cut(s)	60, 465, 486, 647, 805, 1052, 1187
BstF5I	GGATG	1 cut(s)	963
BstFNI	CGCG	1 cut(s)	359
BstHHI	GCGC	1 cut(s)	361
BstMCI	CGRYCG	1 cut(s)	1456
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 356, 1355, 1572
BstNI	CCWGG	5 cut(s)	289, 319, 498, 1518, 1591
BstNSI	RCATGY	2 cut(s)	661, 743
BstSCI	CCNGG	5 cut(s)	287, 317, 496, 1516, 1589
BstSFI	CTRYAG	2 cut(s)	375, 451
BstUI	CGCG	1 cut(s)	359
BstV1I	GCAGC	6 cut(s)	337, 574, 1231, 1436, 1517, 1599
BstV2I	GAAGAC	1 cut(s)	1109
BstX2I	RGATCY	4 cut(s)	173, 421, 460, 1630
BstXI	CCANNNNNNTGG	1 cut(s)	1327
BstYI	RGATCY	4 cut(s)	173, 421, 460, 1630
BstZI	CGGCCG	1 cut(s)	1453
Bsu36I	CCTNAGG	1 cut(s)	60
BsuRI	GGCC	6 cut(s)	24, 231, 1395, 1455, 1530, 1668
BtsCI	GGATG	1 cut(s)	963
BtsI	GCAGTG	1 cut(s)	52
BtsIMutI	CAGTG	7 cut(s)	52, 200, 460, 623, 679, 886, 1160
Cac8I	GCNNGC	5 cut(s)	117, 192, 741, 886, 1577
CaiI	CAGNNNCTG	1 cut(s)	1523
CciI	TCATGA	1 cut(s)	748
CfoI	GCGC	1 cut(s)	361
Cfr10I	RCCGGY	1 cut(s)	1451
Cfr13I	GGNCC	2 cut(s)	322, 1167
CseI	GACGC	1 cut(s)	40
CsiI	ACCWGGT	1 cut(s)	1589
Csp6I	GTAC	5 cut(s)	70, 76, 777, 1212, 1267
CviQI	GTAC	5 cut(s)	70, 76, 777, 1212, 1267
DdeI	CTNAG	7 cut(s)	60, 465, 486, 647, 805, 1052, 1187
DraI	TTTAAA	1 cut(s)	1258
DraIII	CACNNNGTG	1 cut(s)	404
EaeI	YGGCCR	4 cut(s)	22, 229, 1393, 1453
EagI	CGGCCG	1 cut(s)	1453
Eam1104I	CTCTTC	3 cut(s)	989, 1393, 1655
EarI	CTCTTC	3 cut(s)	989, 1393, 1655
EclXI	CGGCCG	1 cut(s)	1453
Eco130I	CCWWGG	2 cut(s)	6, 1531
Eco47I	GGWCC	2 cut(s)	322, 1167
Eco52I	CGGCCG	1 cut(s)	1453
Eco57I	CTGAAG	1 cut(s)	1545
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	1 cut(s)	715
EcoO109I	RGGNCCY	1 cut(s)	322
EcoRI	GAATTC	1 cut(s)	923
EcoRII	CCWGG	5 cut(s)	287, 317, 496, 1516, 1589
EcoT14I	CCWWGG	2 cut(s)	6, 1531
EcoT22I	ATGCAT	1 cut(s)	741
ErhI	CCWWGG	2 cut(s)	6, 1531
FaqI	GGGAC	4 cut(s)	335, 1197, 1367, 1534
FauI	CCCGC	1 cut(s)	999
FbaI	TGATCA	3 cut(s)	828, 897, 1467
FblI	GTMKAC	1 cut(s)	243
Fnu4HI	GCNGC	6 cut(s)	351, 563, 1245, 1425, 1506, 1613
FokI	GGATG	1 cut(s)	950
Fsp4HI	GCNGC	6 cut(s)	351, 563, 1245, 1425, 1506, 1613
FspBI	CTAG	2 cut(s)	528, 1696
GlaI	GCGC	1 cut(s)	360
GluI	GCNGC	6 cut(s)	351, 563, 1245, 1425, 1506, 1613
GsuI	CTGGAG	1 cut(s)	655
HaeIII	GGCC	6 cut(s)	24, 231, 1395, 1455, 1530, 1668
HapII	CCGG	1 cut(s)	1452
HgaI	GACGC	1 cut(s)	40
HhaI	GCGC	1 cut(s)	361
Hin1I	GRCGYC	1 cut(s)	1106
Hin6I	GCGC	1 cut(s)	359
HinP1I	GCGC	1 cut(s)	359
HincII	GTYRAC	2 cut(s)	523, 1063
HindII	GTYRAC	2 cut(s)	523, 1063
HindIII	AAGCTT	2 cut(s)	467, 1577
HinfI	GANTC	5 cut(s)	184, 381, 876, 1276, 1401
HpaI	GTTAAC	1 cut(s)	523
HpaII	CCGG	1 cut(s)	1452
HphI	GGTGA	8 cut(s)	48, 76, 166, 751, 823, 1373, 1441, 1568
Hpy166II	GTNNAC	6 cut(s)	244, 523, 644, 1017, 1063, 1267
Hpy188I	TCNGA	4 cut(s)	808, 1055, 1409, 1598
Hpy188III	TCNNGA	3 cut(s)	528, 749, 1280
Hpy8I	GTNNAC	6 cut(s)	244, 523, 644, 1017, 1063, 1267
HpyAV	CCTTC	2 cut(s)	1103, 1520
HpyCH4III	ACNGT	4 cut(s)	256, 455, 1041, 1381
HpyCH4IV	ACGT	2 cut(s)	1106, 1374
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 356, 1355, 1572
HpyF3I	CTNAG	7 cut(s)	60, 465, 486, 647, 805, 1052, 1187
HpySE526I	ACGT	2 cut(s)	1106, 1374
Hsp92I	GRCGYC	1 cut(s)	1106
HspAI	GCGC	1 cut(s)	359
KflI	GGGWCCC	1 cut(s)	322
KpnI	GGTACC	1 cut(s)	1215
Ksp22I	TGATCA	3 cut(s)	828, 897, 1467
KspAI	GTTAAC	1 cut(s)	523
LmnI	GCTCC	3 cut(s)	281, 347, 1355
Lsp1109I	GCAGC	6 cut(s)	337, 574, 1231, 1436, 1517, 1599
LweI	GCATC	5 cut(s)	208, 617, 726, 976, 1273
MabI	ACCWGGT	1 cut(s)	1589
MaeI	CTAG	2 cut(s)	528, 1696
MaeII	ACGT	2 cut(s)	1106, 1374
MaeIII	GTNAC	4 cut(s)	440, 1361, 1375, 1556
MbiI	CCGCTC	1 cut(s)	1604
MboII	GAAGA	5 cut(s)	470, 1006, 1114, 1410, 1642
MflI	RGATCY	4 cut(s)	173, 421, 460, 1630
MlsI	TGGCCA	2 cut(s)	24, 231
MluNI	TGGCCA	2 cut(s)	24, 231
MlyI	GAGTC	2 cut(s)	178, 1410
MmeI	TCCRAC	1 cut(s)	1145
Mox20I	TGGCCA	2 cut(s)	24, 231
Mph1103I	ATGCAT	1 cut(s)	741
MscI	TGGCCA	2 cut(s)	24, 231
MseI	TTAA	5 cut(s)	336, 522, 771, 1011, 1257
MslI	CAYNNNNRTG	5 cut(s)	237, 656, 893, 968, 1325
Msp20I	TGGCCA	2 cut(s)	24, 231
MspA1I	CMGCKG	2 cut(s)	1244, 1612
MspCI	CTTAAG	1 cut(s)	770
MspI	CCGG	1 cut(s)	1452
MspR9I	CCNGG	5 cut(s)	289, 319, 498, 1518, 1591
Mva1269I	GAATGC	1 cut(s)	651
MvaI	CCWGG	5 cut(s)	289, 319, 498, 1518, 1591
MvnI	CGCG	1 cut(s)	359
MwoI	GCNNNNNNNGC	4 cut(s)	125, 356, 1355, 1572
NlaIV	GGNNCC	4 cut(s)	323, 324, 906, 1213
NmeAIII	GCCGAG	2 cut(s)	166, 1375
NmuCI	GTSAC	2 cut(s)	1361, 1556
NsiI	ATGCAT	1 cut(s)	741
NspI	RCATGY	2 cut(s)	661, 743
PaeI	GCATGC	1 cut(s)	743
PaeR7I	CTCGAG	1 cut(s)	715
PagI	TCATGA	1 cut(s)	748
PctI	GAATGC	1 cut(s)	651
PfeI	GAWTC	3 cut(s)	381, 876, 1276
PflMI	CCANNNNNTGG	1 cut(s)	1176
PkrI	GCNGC	6 cut(s)	352, 564, 1246, 1426, 1507, 1614
PleI	GAGTC	2 cut(s)	178, 1409
PpsI	GAGTC	2 cut(s)	178, 1409
PpuMI	RGGWCCY	1 cut(s)	322
Psp5II	RGGWCCY	1 cut(s)	322
Psp6I	CCWGG	5 cut(s)	287, 317, 496, 1516, 1589
PspGI	CCWGG	5 cut(s)	287, 317, 496, 1516, 1589
PspN4I	GGNNCC	4 cut(s)	323, 324, 906, 1213
PspPI	GGNCC	2 cut(s)	322, 1167
PspPPI	RGGWCCY	1 cut(s)	322
PspXI	VCTCGAGB	1 cut(s)	715
PstNI	CAGNNNCTG	1 cut(s)	1523
PsuI	RGATCY	4 cut(s)	173, 421, 460, 1630
PvuII	CAGCTG	2 cut(s)	1244, 1612
RsaI	GTAC	5 cut(s)	71, 77, 778, 1213, 1268
RsaNI	GTAC	5 cut(s)	70, 76, 777, 1212, 1267
RseI	CAYNNNNRTG	5 cut(s)	237, 656, 893, 968, 1325
SaqAI	TTAA	5 cut(s)	336, 522, 771, 1011, 1257
SatI	GCNGC	6 cut(s)	351, 563, 1245, 1425, 1506, 1613
Sau96I	GGNCC	2 cut(s)	322, 1167
SchI	GAGTC	2 cut(s)	178, 1410
ScrFI	CCNGG	5 cut(s)	289, 319, 498, 1518, 1591
SexAI	ACCWGGT	1 cut(s)	1589
SfaNI	GCATC	5 cut(s)	208, 617, 726, 976, 1273
SfcI	CTRYAG	2 cut(s)	375, 451
Sfr274I	CTCGAG	1 cut(s)	715
SinI	GGWCC	2 cut(s)	322, 1167
SlaI	CTCGAG	1 cut(s)	715
SmiMI	CAYNNNNRTG	5 cut(s)	237, 656, 893, 968, 1325
SmlI	CTYRAG	2 cut(s)	715, 770
SmoI	CTYRAG	2 cut(s)	715, 770
SphI	GCATGC	1 cut(s)	743
SsiI	CCGC	6 cut(s)	43, 357, 410, 1006, 1419, 1602
SspI	AATATT	1 cut(s)	271
SspMI	CTAG	2 cut(s)	528, 1696
StyD4I	CCNGG	5 cut(s)	287, 317, 496, 1516, 1589
StyI	CCWWGG	2 cut(s)	6, 1531
TaaI	ACNGT	4 cut(s)	256, 455, 1041, 1381
TaiI	ACGT	2 cut(s)	1109, 1377
TaqI	TCGA	2 cut(s)	182, 716
TatI	WGTACW	3 cut(s)	69, 75, 1266
TfiI	GAWTC	3 cut(s)	381, 876, 1276
Tru1I	TTAA	5 cut(s)	336, 522, 771, 1011, 1257
Tru9I	TTAA	5 cut(s)	336, 522, 771, 1011, 1257
TscAI	CASTG	7 cut(s)	52, 207, 460, 630, 679, 886, 1160
TseFI	GTSAC	2 cut(s)	1361, 1556
TseI	GCWGC	6 cut(s)	350, 562, 1244, 1424, 1505, 1612
Tsp45I	GTSAC	2 cut(s)	1361, 1556
TspDTI	ATGAA	5 cut(s)	215, 765, 884, 916, 1634
TspGWI	ACGGA	1 cut(s)	186
TspRI	CASTG	7 cut(s)	52, 207, 460, 630, 679, 886, 1160
Van91I	CCANNNNNTGG	1 cut(s)	1176
Vha464I	CTTAAG	1 cut(s)	770
VpaK11BI	GGWCC	2 cut(s)	322, 1167
XapI	RAATTY	5 cut(s)	923, 999, 1113, 1253, 1430
XbaI	TCTAGA	1 cut(s)	527
XceI	RCATGY	2 cut(s)	661, 743
XhoI	CTCGAG	1 cut(s)	715
XmiI	GTMKAC	1 cut(s)	243
XspI	CTAG	2 cut(s)	528, 1696
ZraI	GACGTC	1 cut(s)	1107
Zsp2I	ATGCAT	1 cut(s)	741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.