Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Forward (+)

47573600 .. 47641145

Gene Structure 67546 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG330600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGATGCATGTCTCCTTGACGAGGGGGCTTCTTCTGTTATGCTTGTGTATAGCAGCGGCGACGATAAGAACAGCAGAAGCAGCAGGTGGAGGAGGATACATGAAATATAAGGACCCCAAACAGCCCTTGAATACTAGAATCAATGACCTACTGAGCCGGATGACTTTGGAGGAAAAGATTGGCCAGATGACACAGATAGACCGCAGTGTTGCTTCAGCTGAGGTCATGAACAAGTACTACATTGGGAGTGTGTTTAGCGGCGCTGTGAGTGTGCCATCAGAAAAAGATTCTGCAGAAACTTGGGTTACAATGGTGAATGATTTTCAAAAGGGTTCTCTATCAACTCGCCTTGGTATTCCAATGATTTATGGTATTGATGCTGTTCATGGCCACAATAATGTCTACAAGGCAACAATCTTTCCTCACAATGTTGGCCTTGGAGCTACCAGGGACCCTGAACTTGTTAAAAGGATTGGAGCTGCAACTGCACTTGAAGTTAGAGCCACAGGCATTCCATACGTCTTTGCACCTTGCATAGCGGTTTGTAGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTACAGTGAAGATCATAAGGTTGTTCAAGCAATGACTCAGATCATACCTGGATTACAAGGAGACATACCACCTAACTCTAGAAAGGGTGTTCCCTTTCTAGCAGCTGGAAATAAAAAGGTTGCAGCCTGTGCAAAGCATTATGTGGGCGATGGTGGAACAACCAAAGGCATCGATGAGGATAACACTGTAATAAACAGGCATGGGTTACTCAGCATTCACATGCCACCCTACTATAACTCAATTATCGAAGGTGTTGCAACCATTATGGTATCTTACTCCAGCTGGAATGGAGTCAAGATGCATGCTAACCGTGATCTTGTCACTGGCTTTCTTAAGAATACTCTCCGTTTCAGGGGTTTTGTCATCTCAGATTTCATGGGTATTGACAGAATTACCTCACCAGCTTATGCCAACTACTCATACTCGATTACAGCAGGGATCAATGCTGGCATTGACATGATCATGGTTCCATACAACTATACAGAATTCATTGATGGTCTAACTTTCCAGGCAAAAAATAAAATCATTCCCATGAGCAGAATTGATGATGCAGTGAGGAGAATTTTGCGGGTTAAGTTTATAATGGGGCTATTTGAGAATCCGTTGGCTGATCTCAGCCTCGTCAACCAGCTTGGCAGTCAGGAACACAGAGACTTGGCTCGGGAAGCTGTGAGGCGATCGTTAGTTCTTCTAAAGAATGGTGAATCTGCAGACAAGCCATTGCTACCCCTTCCAAAGAAGACATCAAAAATACTTGTAGCTGGAAGTCATGCAGACAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGATCGAGTGGCAACGATCTCACACATGGTACCACAATCCTAACCAGTATAAAGAACACAGTTGATCCAGAAACTGAAGTGGTGTACAAGGAGAATCCTGATGCTGAGTATGTTAAGTCAAATGATTTCTCCTATGCCATCGTTGTCGTAGGAGAACCACCATATGCGGAGACATTTGGTGACAGTTTAACTTTGACTCTGCCTGATGCGGGCCTTAAAACCATTACAAATGTTTGTGGTGCTGTGAAGTGTGTTGTCATCATCATCTCCGGTCGTCCTGTTGTGATCCAACCATACGTTCCCCTGCTAGATGCTCTGGTTGCGGCGTGGCTTCCAGGAAGTGAGGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGACTATGGTTTCACCGGCAAGCTTTCTCGCACTTGGTTTAAAACCGTTGATCAGCTACCTATGAATGTTGGAGATCCACATTATGACCCTCTCTTCCCCTTTGGATTTGGCCTGACAACAACACCCACCAAAGCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0042597 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

637

Amino Acids

69.42

Weight (kDa)

7.19

Isoelectric Point (pI)

32.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	55 - 384	4.4e-67	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	421 - 630	4e-38	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1160
AarI	CACCTGC	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	74
Acc65I	GGTACC	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	1427
AccB7I	CCANNNNNTGG	1 cut(s)	1392
AccI	GTMKAC	1 cut(s)	402
AciI	CCGC	8 cut(s)	56, 202, 258, 539, 1147, 1565, 1607, 1721
AclWI	GGATC	6 cut(s)	545, 1025, 1408, 1457, 1678, 1841
AcoI	YGGCCR	2 cut(s)	181, 388
AcsI	RAATTY	2 cut(s)	1064, 1140
AcuI	CTGAAG	2 cut(s)	198, 1494
AfaI	GTAC	3 cut(s)	236, 1429, 1484
AfiI	CCNNNNNNNGG	5 cut(s)	21, 560, 931, 1392, 1607
AflII	CTTAAG	1 cut(s)	911
AgsI	TTSAA	4 cut(s)	130, 326, 494, 605
AjnI	CCWGG	4 cut(s)	446, 625, 1086, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	1680, 1712
Alw26I	GTCTC	4 cut(s)	16, 633, 1224, 1562
AlwI	GGATC	6 cut(s)	545, 1025, 1408, 1457, 1678, 1841
AlwNI	CAGNNNCTG	1 cut(s)	1472
Ama87I	CYCGRG	1 cut(s)	1239
AoxI	GGCC	6 cut(s)	181, 388, 433, 1609, 1744, 1882
ApeKI	GCWGC	5 cut(s)	53, 80, 479, 680, 701
ApoI	RAATTY	2 cut(s)	1064, 1140
Asp718I	GGTACC	1 cut(s)	1427
AspLEI	GCGC	1 cut(s)	263
AspS9I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
AsuHPI	GGTGA	6 cut(s)	325, 969, 1292, 1589, 1777, 1784
AvaI	CYCGRG	1 cut(s)	1239
AvaII	GGWCC	3 cut(s)	112, 451, 1383
BalI	TGGCCA	2 cut(s)	183, 390
BanI	GGYRCC	1 cut(s)	1427
BbsI	GAAGAC	1 cut(s)	1325
BbvCI	CCTCAGC	1 cut(s)	219
BbvI	GCAGC	5 cut(s)	65, 92, 466, 692, 713
BccI	CCATC	5 cut(s)	283, 552, 722, 1067, 1544
BcgI	CGANNNNNNTGC	2 cut(s)	815, 849
BciT130I	CCWGG	4 cut(s)	448, 627, 1088, 1734
BciVI	GTATCC	1 cut(s)	89
BclI	TGATCA	2 cut(s)	1038, 1822
BcoDI	GTCTC	4 cut(s)	16, 633, 1224, 1562
BfaI	CTAG	5 cut(s)	135, 657, 677, 1706, 1912
BfmI	CTRYAG	3 cut(s)	291, 580, 1287
BfoI	RGCGCY	1 cut(s)	264
BfrI	CTTAAG	1 cut(s)	911
BfuAI	ACCTGC	1 cut(s)	74
BfuI	GTATCC	1 cut(s)	89
BisI	GCNGC	8 cut(s)	54, 57, 81, 259, 480, 681, 702, 1722
BlsI	GCNGC	8 cut(s)	55, 58, 82, 260, 481, 682, 703, 1723
BmcAI	AGTACT	1 cut(s)	236
Bme1390I	CCNGG	4 cut(s)	448, 627, 1088, 1734
Bme18I	GGWCC	3 cut(s)	112, 451, 1383
BmeT110I	CYCGRG	1 cut(s)	1239
BmgT120I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
BmiI	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
BmrFI	CCNGG	4 cut(s)	448, 627, 1088, 1734
BmsI	GCATC	7 cut(s)	367, 756, 867, 1117, 1489, 1594, 1699
BpiI	GAAGAC	1 cut(s)	1325
BpmI	CTGGAG	1 cut(s)	841
Bpu10I	CCTNAGC	1 cut(s)	219
Bsa29I	ATCGAT	1 cut(s)	750
BsaJI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BsaWI	WCCGGW	1 cut(s)	1667
Bsc4I	CCNNNNNNNGG	5 cut(s)	21, 560, 931, 1392, 1607
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	2 cut(s)	907, 1443
Bse3DI	GCAATG	2 cut(s)	615, 1298
BseBI	CCWGG	4 cut(s)	448, 627, 1088, 1734
BseCI	ATCGAT	1 cut(s)	750
BseDI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BseGI	GGATG	1 cut(s)	165
BseLI	CCNNNNNNNGG	5 cut(s)	21, 560, 931, 1392, 1607
BseMI	GCAATG	2 cut(s)	615, 1298
BseMII	CTCAG	7 cut(s)	143, 210, 629, 802, 960, 1207, 1494
BseNI	ACTGG	2 cut(s)	907, 1443
BseRI	GAGGAG	2 cut(s)	105, 1150
BseXI	GCAGC	5 cut(s)	65, 92, 466, 692, 713
BsgI	GTGCAG	1 cut(s)	471
Bsh1285I	CGRYCG	2 cut(s)	1259, 1672
BshFI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BshNI	GGYRCC	1 cut(s)	1427
BshVI	ATCGAT	1 cut(s)	750
BsiEI	CGRYCG	2 cut(s)	1259, 1672
BsiHKCI	CYCGRG	1 cut(s)	1239
BsiSI	CCGG	3 cut(s)	157, 1668, 1788
BslFI	GGGAC	1 cut(s)	464
BslI	CCNNNNNNNGG	5 cut(s)	21, 560, 931, 1392, 1607
BsmAI	GTCTC	4 cut(s)	16, 633, 1224, 1562
BsmFI	GGGAC	1 cut(s)	464
BsmI	GAATGC	2 cut(s)	510, 792
BsnI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BsoBI	CYCGRG	1 cut(s)	1239
Bsp1407I	TGTACA	1 cut(s)	1482
BspACI	CCGC	8 cut(s)	56, 202, 258, 539, 1147, 1565, 1607, 1721
BspANI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BspCNI	CTCAG	7 cut(s)	144, 211, 628, 801, 959, 1206, 1495
BspDI	ATCGAT	1 cut(s)	750
BspHI	TCATGA	1 cut(s)	225
BspLI	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
BspMAI	CTGCAG	2 cut(s)	295, 1291
BspMI	ACCTGC	1 cut(s)	74
BspPI	GGATC	6 cut(s)	545, 1025, 1408, 1457, 1678, 1841
BspT107I	GGYRCC	1 cut(s)	1427
BspTI	CTTAAG	1 cut(s)	911
BsrDI	GCAATG	2 cut(s)	615, 1298
BsrFI	RCCGGY	1 cut(s)	1787
BsrGI	TGTACA	1 cut(s)	1482
BsrI	ACTGG	2 cut(s)	907, 1443
BssAI	RCCGGY	1 cut(s)	1787
BssECI	CCNNGG	4 cut(s)	349, 436, 447, 1747
BssT1I	CCWWGG	3 cut(s)	349, 436, 1747
Bst2UI	CCWGG	4 cut(s)	448, 627, 1088, 1734
Bst4CI	ACNGT	6 cut(s)	584, 766, 890, 1459, 1583, 1819
Bst6I	CTCTTC	1 cut(s)	1871
BstAFI	CTTAAG	1 cut(s)	911
BstAPI	GCANNNNNTGC	1 cut(s)	707
BstAUI	TGTACA	1 cut(s)	1482
BstC8I	GCNNGC	4 cut(s)	882, 1027, 1609, 1793
BstDEI	CTNAG	7 cut(s)	152, 219, 615, 788, 946, 1193, 1503
BstENI	CCTNNNNNAGG	1 cut(s)	19
BstF5I	GGATG	1 cut(s)	165
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	1 cut(s)	263
BstMAI	GTCTC	4 cut(s)	16, 633, 1224, 1562
BstMCI	CGRYCG	2 cut(s)	1259, 1672
BstMWI	GCNNNNNNNGC	5 cut(s)	80, 485, 707, 1244, 1718
BstNI	CCWGG	4 cut(s)	448, 627, 1088, 1734
BstNSI	RCATGY	3 cut(s)	11, 802, 884
BstSCI	CCNGG	4 cut(s)	446, 625, 1086, 1732
BstSFI	CTRYAG	3 cut(s)	291, 580, 1287
BstV1I	GCAGC	5 cut(s)	65, 92, 466, 692, 713
BstV2I	GAAGAC	1 cut(s)	1325
BstX2I	RGATCY	2 cut(s)	550, 1846
BstYI	RGATCY	2 cut(s)	550, 1846
Bsu15I	ATCGAT	1 cut(s)	750
BsuI	GTATCC	1 cut(s)	89
BsuRI	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
BsuTUI	ATCGAT	1 cut(s)	750
BtgZI	GCGATG	1 cut(s)	741
BtsCI	GGATG	1 cut(s)	165
BtsI	GCAGTG	2 cut(s)	211, 1137
BtsIMutI	CAGTG	6 cut(s)	211, 589, 762, 900, 1137, 1376
BveI	ACCTGC	1 cut(s)	74
Cac8I	GCNNGC	4 cut(s)	882, 1027, 1609, 1793
CaiI	CAGNNNCTG	1 cut(s)	1472
CciI	TCATGA	1 cut(s)	225
CfoI	GCGC	1 cut(s)	263
Cfr10I	RCCGGY	1 cut(s)	1787
Cfr13I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
ClaI	ATCGAT	1 cut(s)	750
Csp6I	GTAC	3 cut(s)	235, 1428, 1483
CviQI	GTAC	3 cut(s)	235, 1428, 1483
DdeI	CTNAG	7 cut(s)	152, 219, 615, 788, 946, 1193, 1503
DraI	TTTAAA	1 cut(s)	1813
EaeI	YGGCCR	2 cut(s)	181, 388
Eam1104I	CTCTTC	1 cut(s)	1871
EarI	CTCTTC	1 cut(s)	1871
Eco130I	CCWWGG	3 cut(s)	349, 436, 1747
Eco47I	GGWCC	3 cut(s)	112, 451, 1383
Eco57I	CTGAAG	2 cut(s)	198, 1494
Eco88I	CYCGRG	1 cut(s)	1239
EcoNI	CCTNNNNNAGG	1 cut(s)	19
EcoO109I	RGGNCCY	2 cut(s)	112, 451
EcoRI	GAATTC	1 cut(s)	1064
EcoRII	CCWGG	4 cut(s)	446, 625, 1086, 1732
EcoT14I	CCWWGG	3 cut(s)	349, 436, 1747
EcoT22I	ATGCAT	2 cut(s)	9, 882
ErhI	CCWWGG	3 cut(s)	349, 436, 1747
FaqI	GGGAC	1 cut(s)	464
FauI	CCCGC	2 cut(s)	1140, 1600
FauNDI	CATATG	1 cut(s)	1561
FbaI	TGATCA	2 cut(s)	1038, 1822
FblI	GTMKAC	1 cut(s)	402
Fnu4HI	GCNGC	8 cut(s)	54, 57, 81, 259, 480, 681, 702, 1722
FokI	GGATG	1 cut(s)	172
Fsp4HI	GCNGC	8 cut(s)	54, 57, 81, 259, 480, 681, 702, 1722
FspBI	CTAG	5 cut(s)	135, 657, 677, 1706, 1912
GlaI	GCGC	1 cut(s)	262
GluI	GCNGC	8 cut(s)	54, 57, 81, 259, 480, 681, 702, 1722
GsuI	CTGGAG	1 cut(s)	841
HaeII	RGCGCY	1 cut(s)	264
HaeIII	GGCC	6 cut(s)	183, 390, 435, 1611, 1746, 1884
HapII	CCGG	3 cut(s)	157, 1668, 1788
HhaI	GCGC	1 cut(s)	263
Hin6I	GCGC	1 cut(s)	261
HinP1I	GCGC	1 cut(s)	261
HincII	GTYRAC	1 cut(s)	1204
HindII	GTYRAC	1 cut(s)	1204
HindIII	AAGCTT	1 cut(s)	1793
HinfI	GANTC	8 cut(s)	138, 287, 613, 870, 1177, 1283, 1492, 1594
HpaII	CCGG	3 cut(s)	157, 1668, 1788
HphI	GGTGA	6 cut(s)	325, 969, 1292, 1589, 1777, 1784
Hpy166II	GTNNAC	3 cut(s)	403, 1204, 1483
Hpy188I	TCNGA	3 cut(s)	280, 618, 949
Hpy188III	TCNNGA	7 cut(s)	226, 657, 874, 1220, 1241, 1466, 1496
Hpy8I	GTNNAC	3 cut(s)	403, 1204, 1483
Hpy99I	CGWCG	1 cut(s)	64
HpyAV	CCTTC	2 cut(s)	821, 1319
HpyCH4III	ACNGT	6 cut(s)	584, 766, 890, 1459, 1583, 1819
HpyCH4IV	ACGT	2 cut(s)	519, 1695
HpyF10VI	GCNNNNNNNGC	5 cut(s)	80, 485, 707, 1244, 1718
HpyF3I	CTNAG	7 cut(s)	152, 219, 615, 788, 946, 1193, 1503
HpySE526I	ACGT	2 cut(s)	519, 1695
HspAI	GCGC	1 cut(s)	261
KflI	GGGWCCC	1 cut(s)	451
KpnI	GGTACC	1 cut(s)	1431
Ksp22I	TGATCA	2 cut(s)	1038, 1822
LmnI	GCTCC	2 cut(s)	440, 476
Lsp1109I	GCAGC	5 cut(s)	65, 92, 466, 692, 713
LweI	GCATC	7 cut(s)	367, 756, 867, 1117, 1489, 1594, 1699
MaeI	CTAG	5 cut(s)	135, 657, 677, 1706, 1912
MaeII	ACGT	2 cut(s)	519, 1695
MaeIII	GTNAC	6 cut(s)	304, 569, 783, 898, 1577, 1772
MboII	GAAGA	5 cut(s)	23, 599, 1259, 1330, 1858
MflI	RGATCY	2 cut(s)	550, 1846
MlsI	TGGCCA	2 cut(s)	183, 390
MluCI	AATT	5 cut(s)	819, 969, 1064, 1119, 1140
MluNI	TGGCCA	2 cut(s)	183, 390
MlyI	GAGTC	3 cut(s)	607, 879, 1588
MmeI	TCCRAC	3 cut(s)	1361, 1711, 1822
Mox20I	TGGCCA	2 cut(s)	183, 390
Mph1103I	ATGCAT	2 cut(s)	9, 882
MscI	TGGCCA	2 cut(s)	183, 390
MseI	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
MslI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
Msp20I	TGGCCA	2 cut(s)	183, 390
MspA1I	CMGCKG	4 cut(s)	56, 218, 683, 861
MspCI	CTTAAG	1 cut(s)	911
MspI	CCGG	3 cut(s)	157, 1668, 1788
MspR9I	CCNGG	4 cut(s)	448, 627, 1088, 1734
Mva1269I	GAATGC	2 cut(s)	510, 792
MvaI	CCWGG	4 cut(s)	448, 627, 1088, 1734
MwoI	GCNNNNNNNGC	5 cut(s)	80, 485, 707, 1244, 1718
NdeI	CATATG	1 cut(s)	1561
NlaIV	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
NmuCI	GTSAC	3 cut(s)	898, 1577, 1772
NsiI	ATGCAT	2 cut(s)	9, 882
NspI	RCATGY	3 cut(s)	11, 802, 884
PaeI	GCATGC	1 cut(s)	884
PagI	TCATGA	1 cut(s)	225
PaqCI	CACCTGC	1 cut(s)	74
PctI	GAATGC	2 cut(s)	510, 792
PfeI	GAWTC	5 cut(s)	138, 287, 1177, 1283, 1492
PflMI	CCANNNNNTGG	1 cut(s)	1392
PfoI	TCCNGGA	1 cut(s)	1732
PkrI	GCNGC	8 cut(s)	55, 58, 82, 260, 481, 682, 703, 1723
Ple19I	CGATCG	1 cut(s)	1259
PleI	GAGTC	3 cut(s)	607, 878, 1588
PpsI	GAGTC	3 cut(s)	607, 878, 1588
PpuMI	RGGWCCY	2 cut(s)	112, 451
PsiI	TTATAA	1 cut(s)	1160
Psp5II	RGGWCCY	2 cut(s)	112, 451
Psp6I	CCWGG	4 cut(s)	446, 625, 1086, 1732
PspGI	CCWGG	4 cut(s)	446, 625, 1086, 1732
PspN4I	GGNNCC	5 cut(s)	114, 452, 453, 1047, 1429
PspPI	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
PspPPI	RGGWCCY	2 cut(s)	112, 451
PsrI	GAACNNNNNNTAC	2 cut(s)	221, 253
PstI	CTGCAG	2 cut(s)	295, 1291
PstNI	CAGNNNCTG	1 cut(s)	1472
PsuI	RGATCY	2 cut(s)	550, 1846
PvuI	CGATCG	1 cut(s)	1259
PvuII	CAGCTG	3 cut(s)	218, 683, 861
RsaI	GTAC	3 cut(s)	236, 1429, 1484
RsaNI	GTAC	3 cut(s)	235, 1428, 1483
RseI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
SaqAI	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
SatI	GCNGC	8 cut(s)	54, 57, 81, 259, 480, 681, 702, 1722
Sau96I	GGNCC	5 cut(s)	112, 451, 1383, 1609, 1744
ScaI	AGTACT	1 cut(s)	236
SchI	GAGTC	3 cut(s)	607, 879, 1588
ScrFI	CCNGG	4 cut(s)	448, 627, 1088, 1734
SfaNI	GCATC	7 cut(s)	367, 756, 867, 1117, 1489, 1594, 1699
SfcI	CTRYAG	3 cut(s)	291, 580, 1287
SinI	GGWCC	3 cut(s)	112, 451, 1383
SmiMI	CAYNNNNRTG	5 cut(s)	396, 797, 1034, 1040, 1109
SmlI	CTYRAG	1 cut(s)	911
SmoI	CTYRAG	1 cut(s)	911
SphI	GCATGC	1 cut(s)	884
Sse9I	AATT	5 cut(s)	819, 969, 1064, 1119, 1140
SsiI	CCGC	8 cut(s)	56, 202, 258, 539, 1147, 1565, 1607, 1721
SspMI	CTAG	5 cut(s)	135, 657, 677, 1706, 1912
StyD4I	CCNGG	4 cut(s)	446, 625, 1086, 1732
StyI	CCWWGG	3 cut(s)	349, 436, 1747
TaaI	ACNGT	6 cut(s)	584, 766, 890, 1459, 1583, 1819
TaiI	ACGT	2 cut(s)	522, 1698
TaqI	TCGA	4 cut(s)	750, 825, 1004, 1403
TasI	AATT	5 cut(s)	819, 969, 1064, 1119, 1140
TatI	WGTACW	2 cut(s)	234, 1482
TauI	GCSGC	3 cut(s)	59, 261, 1724
TfiI	GAWTC	5 cut(s)	138, 287, 1177, 1283, 1492
Tru1I	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
Tru9I	TTAA	7 cut(s)	465, 912, 1152, 1512, 1586, 1614, 1812
TscAI	CASTG	6 cut(s)	211, 589, 769, 907, 1137, 1376
TseFI	GTSAC	3 cut(s)	898, 1577, 1772
TseI	GCWGC	5 cut(s)	53, 80, 479, 680, 701
Tsp45I	GTSAC	3 cut(s)	898, 1577, 1772
TspDTI	ATGAA	6 cut(s)	116, 242, 374, 943, 1057, 1850
TspGWI	ACGGA	2 cut(s)	914, 1170
TspRI	CASTG	6 cut(s)	211, 589, 769, 907, 1137, 1376
Van91I	CCANNNNNTGG	1 cut(s)	1392
Vha464I	CTTAAG	1 cut(s)	911
VpaK11BI	GGWCC	3 cut(s)	112, 451, 1383
XagI	CCTNNNNNAGG	1 cut(s)	19
XapI	RAATTY	2 cut(s)	1064, 1140
XbaI	TCTAGA	1 cut(s)	656
XceI	RCATGY	3 cut(s)	11, 802, 884
XmiI	GTMKAC	1 cut(s)	402
XspI	CTAG	5 cut(s)	135, 657, 677, 1706, 1912
ZrmI	AGTACT	1 cut(s)	236
Zsp2I	ATGCAT	2 cut(s)	9, 882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.