Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Reverse (-)

46314709 .. 46317682

Gene Structure 2974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034619

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCATACAAGGACCCGAAGAAGCCAATAAATGCTAGAATCAAGGACCTGATGGGGAGAATGACAGTAGCAGAAAAGGTGGGGCAGATGACGCAGCTGGAACGTGGAAATGCAACAGCTGAGATCATGAGGGACTACTCAATAGGCAGTGTACTGAGTGGCGGAGGGAGCGTGCCGCGGCCGCAGGCCACTCCACAGGATTGGATCAAAATGTTCAATGACTTTCAAAAAGGTTCATTGTCTAGCCGCCTTGGAATCCCTATGATTTATGGCATTGATGCTGTTCATGGCCACAATAATGCTTATAAAGCCACCATTTTCCCTCATAATGCGTTGTCTAATTTGCATAACAATTTTGCCATCTTGTGCAGGGATCCAGAACTTGTGAAGAAAATTGGTTCTGCAACTGCTCTCGAAGTTAGAGCTACTGGCATTAACTATGCTTTTGCACCATGTGTTGCGGTCTGCAGAGATCCAAGATGGGGTAGATGTTACGAGAGTTACAGCGAGGATCCTGAAATCGTAAAACAAATGACTGATATCATACTTGGATTGCAAGGCGAAATACCAGCTGATTCACGGAAGGGTGTTCCATTTGTTGGTGGAAAGGATAAGGTAGCGGCTTGCGCAAAACACTTTGTTGGAGACGGTGGTACGACCAAGGGCATCAATGAGAACAATACCGTGATTGATAAGCATGGATTATTGAACATTCACATGCCTGGTTATTACCATTCTATCATCAAGGGCGTATCCACTGTCATGGTATCCTACTCCAGCTTGAATGGAACGAAGATGCATGCTAACCACAAGCTCGTCACCCAATTTCTTAAGAACACCCTTAAGTTCAGGGGATTTGTCATCTCTGACTGGCAGGGTATCGACAAACTTACCCTTCCGGTTCATTCTGATTACCCAAAATCAGTTCTTGCTGGTATTCAAGCTGGCATTGACATGGTCATGGTTCCCTTTAATCATACCGAGTTCATTGGGATTCTAACCAATCATGTCAACAACAAACTCGTCCCAATGAGTCGTATTGATGATGCAGTTAAGAGAATTCTGAGAGTCAAGTTCACTATGGGTCTGTTTGAGAACCCTTTGGCTGATGAGAGCTTTGTTGACCAGCTTGGAAGCCAGGCACACAGAGATTTGGCAAGGGAAGCAGTGAGGAAGTCGCTTGTTCTTCTGAAGAATGGAGATAATGCAGATACACCAGTACTACCACTCCCTAAAGAGGCCCCAAGAATCCTAGTTGCTGGAACTCATGCTAATAATTTGGGTTATCAATGTGGTGGCTGGAGTGTCACTTGGCAAGGAGTTAGTGGAAACAATTATACATCTGGAGCCACCATCCTAAGTGCCATCACAGCTGCAGTTGACCCCAGCACCGAAATCATCTTCAGTGAAAGTCCTGGTGCTGATTTTGTCACGGCAAACAACTTCTCCTATGCCATTGTTGTTGTTGGAGAGCTCCCTTATGCGGAGACAAACGGGGACAGTTTAAATTTGACAATTGCACAACCGGGTCCAAGCACCATCACCAATGTATGTGGCCAAGTCAAGTGTGTGGTTGTAGTAATCTCTGGCCGTCCTGTTGTGATCGAACCCTACATTTCATTGATGGATGCTCTTGTGGCTGCATGGCTACCTGGAACTGAAGGTCAAGGAGTTACAGATGTTCTCTTTGGCGATTATGGATTTACCGGCAAGCTTCCTAGGACTTGGTTCAAGACAGTAGATCAGCTCCCTATGAATGTTGGTGACAAACATTATGATCCCCTCTTTCCGTTTGGTTTTGGCCTTACAACTCAACTGATTAAGAATTCAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

612

Amino Acids

66.34

Weight (kDa)

8.0

Isoelectric Point (pI)

27.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	22 - 357	5.7e-64	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	394 - 603	4.7e-37	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	306
Acc16I	TGCGCA	1 cut(s)	628
AccB7I	CCANNNNNTGG	1 cut(s)	599
AccII	CGCG	1 cut(s)	178
AciI	CCGC	8 cut(s)	162, 176, 178, 182, 247, 461, 620, 1484
AclWI	GGATC	7 cut(s)	212, 368, 381, 467, 506, 519, 1772
AcoI	YGGCCR	4 cut(s)	179, 289, 1555, 1588
AcsI	RAATTY	3 cut(s)	1059, 1507, 1825
AcuI	CTGAAG	3 cut(s)	1211, 1387, 1680
AdeI	CACNNNGTG	1 cut(s)	455
AfaI	GTAC	3 cut(s)	153, 655, 1221
AfiI	CCNNNNNNNGG	4 cut(s)	482, 599, 1237, 1483
AflII	CTTAAG	2 cut(s)	830, 842
AgsI	TTSAA	7 cut(s)	217, 227, 709, 784, 941, 1732, 1830
AjnI	CCWGG	4 cut(s)	721, 1137, 1414, 1651
Alw21I	GWGCWC	1 cut(s)	1476
Alw26I	GTCTC	2 cut(s)	639, 1481
AlwI	GGATC	7 cut(s)	212, 368, 381, 467, 506, 519, 1772
AoxI	GGCC	7 cut(s)	179, 186, 289, 1239, 1555, 1588, 1801
ApeKI	GCWGC	3 cut(s)	94, 1373, 1640
ApoI	RAATTY	3 cut(s)	1059, 1507, 1825
AspA2I	CCTAGG	1 cut(s)	1718
AspLEI	GCGC	1 cut(s)	629
AspS9I	GGNCC	4 cut(s)	13, 46, 1240, 1529
AsuC2I	CCSGG	1 cut(s)	1527
AsuHPI	GGTGA	3 cut(s)	811, 1534, 1775
AvaII	GGWCC	3 cut(s)	13, 46, 1529
AvrII	CCTAGG	1 cut(s)	1718
BaeI	ACNNNNGTAYC	2 cut(s)	1203, 1236
BalI	TGGCCA	2 cut(s)	291, 1557
BamHI	GGATCC	2 cut(s)	373, 511
BanII	GRGCYC	1 cut(s)	1476
Bbv12I	GWGCWC	1 cut(s)	1476
BbvI	GCAGC	3 cut(s)	106, 1360, 1627
BccI	CCATC	7 cut(s)	46, 368, 474, 1361, 1373, 1547, 1618
BceAI	ACGGC	2 cut(s)	1449, 1575
BciT130I	CCWGG	4 cut(s)	723, 1139, 1416, 1653
BciVI	GTATCC	2 cut(s)	763, 778
BcnI	CCSGG	1 cut(s)	1527
BcoDI	GTCTC	2 cut(s)	639, 1481
BfaI	CTAG	4 cut(s)	36, 243, 1253, 1719
BfmI	CTRYAG	2 cut(s)	466, 1374
BfrI	CTTAAG	2 cut(s)	830, 842
BfuI	GTATCC	2 cut(s)	763, 778
BisI	GCNGC	8 cut(s)	95, 176, 179, 182, 247, 621, 1374, 1641
BlnI	CCTAGG	1 cut(s)	1718
BlsI	GCNGC	8 cut(s)	96, 177, 180, 183, 248, 622, 1375, 1642
BmcAI	AGTACT	1 cut(s)	1221
Bme1390I	CCNGG	5 cut(s)	723, 1139, 1416, 1527, 1653
Bme18I	GGWCC	3 cut(s)	13, 46, 1529
BmgT120I	GGNCC	4 cut(s)	13, 46, 1240, 1529
BmiI	GGNNCC	7 cut(s)	15, 375, 513, 966, 1242, 1348, 1530
BmrFI	CCNGG	5 cut(s)	723, 1139, 1416, 1527, 1653
BmsI	GCATC	5 cut(s)	268, 675, 786, 1036, 1618
BpmI	CTGGAG	3 cut(s)	760, 1321, 1365
BpuMI	CCSGG	1 cut(s)	1527
BsaJI	CCNNGG	4 cut(s)	176, 250, 660, 1718
BsaWI	WCCGGW	1 cut(s)	898
BsaXI	ACNNNNNCTCC	6 cut(s)	156, 186, 1212, 1242, 1430, 1460
Bsc4I	CCNNNNNNNGG	4 cut(s)	482, 599, 1237, 1483
Bse118I	RCCGGY	1 cut(s)	1706
Bse1I	ACTGG	3 cut(s)	433, 875, 1217
BseBI	CCWGG	4 cut(s)	723, 1139, 1416, 1653
BseDI	CCNNGG	4 cut(s)	176, 250, 660, 1718
BseGI	GGATG	2 cut(s)	1353, 1633
BseLI	CCNNNNNNNGG	4 cut(s)	482, 599, 1237, 1483
BseMII	CTCAG	3 cut(s)	111, 146, 1055
BseNI	ACTGG	3 cut(s)	433, 875, 1217
BseX3I	CGGCCG	1 cut(s)	179
BseXI	GCAGC	3 cut(s)	106, 1360, 1627
BseYI	CCCAGC	1 cut(s)	1385
BsgI	GTGCAG	1 cut(s)	388
Bsh1236I	CGCG	1 cut(s)	178
Bsh1285I	CGRYCG	1 cut(s)	182
BshFI	GGCC	7 cut(s)	181, 188, 291, 1241, 1557, 1590, 1803
BsiEI	CGRYCG	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	1476
BsiSI	CCGG	3 cut(s)	899, 1526, 1707
BslFI	GGGAC	3 cut(s)	146, 1010, 1511
BslI	CCNNNNNNNGG	4 cut(s)	482, 599, 1237, 1483
BsmAI	GTCTC	2 cut(s)	639, 1481
BsmBI	CGTCTC	1 cut(s)	639
BsmFI	GGGAC	3 cut(s)	146, 1010, 1511
BsnI	GGCC	7 cut(s)	181, 188, 291, 1241, 1557, 1590, 1803
Bsp1286I	GDGCHC	1 cut(s)	1476
Bsp143I	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
BspACI	CCGC	8 cut(s)	162, 176, 178, 182, 247, 461, 620, 1484
BspANI	GGCC	7 cut(s)	181, 188, 291, 1241, 1557, 1590, 1803
BspCNI	CTCAG	3 cut(s)	112, 147, 1056
BspFNI	CGCG	1 cut(s)	178
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	7 cut(s)	15, 375, 513, 966, 1242, 1348, 1530
BspMAI	CTGCAG	2 cut(s)	470, 1378
BspPI	GGATC	7 cut(s)	212, 368, 381, 467, 506, 519, 1772
BspTI	CTTAAG	2 cut(s)	830, 842
BsrFI	RCCGGY	1 cut(s)	1706
BsrI	ACTGG	3 cut(s)	433, 875, 1217
BssAI	RCCGGY	1 cut(s)	1706
BssECI	CCNNGG	4 cut(s)	176, 250, 660, 1718
BssMI	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
BssT1I	CCWWGG	3 cut(s)	250, 660, 1718
Bst2UI	CCWGG	4 cut(s)	723, 1139, 1416, 1653
Bst4CI	ACNGT	6 cut(s)	67, 650, 685, 760, 1502, 1738
BstAFI	CTTAAG	2 cut(s)	830, 842
BstC8I	GCNNGC	6 cut(s)	173, 186, 625, 801, 946, 1712
BstDEI	CTNAG	4 cut(s)	120, 155, 1064, 1358
BstDSI	CCRYGG	1 cut(s)	176
BstF5I	GGATG	2 cut(s)	1353, 1633
BstFNI	CGCG	1 cut(s)	178
BstHHI	GCGC	1 cut(s)	629
BstKTI	GATC	8 cut(s)	126, 207, 376, 475, 514, 1605, 1744, 1780
BstMAI	GTCTC	2 cut(s)	639, 1481
BstMBI	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
BstMCI	CGRYCG	1 cut(s)	182
BstMWI	GCNNNNNNNGC	8 cut(s)	91, 168, 181, 308, 626, 1163, 1370, 1637
BstNI	CCWGG	4 cut(s)	723, 1139, 1416, 1653
BstNSI	RCATGY	2 cut(s)	721, 803
BstSCI	CCNGG	5 cut(s)	721, 1137, 1414, 1525, 1651
BstSFI	CTRYAG	2 cut(s)	466, 1374
BstUI	CGCG	1 cut(s)	178
BstV1I	GCAGC	3 cut(s)	106, 1360, 1627
BstX2I	RGATCY	3 cut(s)	373, 472, 511
BstXI	CCANNNNNNTGG	2 cut(s)	201, 763
BstYI	RGATCY	3 cut(s)	373, 472, 511
BstZI	CGGCCG	1 cut(s)	179
BsuI	GTATCC	2 cut(s)	763, 778
BsuRI	GGCC	7 cut(s)	181, 188, 291, 1241, 1557, 1590, 1803
BtgI	CCRYGG	1 cut(s)	176
BtsCI	GGATG	2 cut(s)	1353, 1633
BtsI	GCAGTG	2 cut(s)	154, 1173
BtsIMutI	CAGTG	4 cut(s)	154, 756, 1173, 1411
Cac8I	GCNNGC	6 cut(s)	173, 186, 625, 801, 946, 1712
CciI	TCATGA	1 cut(s)	126
CciNI	GCGGCCGC	1 cut(s)	179
CfoI	GCGC	1 cut(s)	629
Cfr10I	RCCGGY	1 cut(s)	1706
Cfr13I	GGNCC	4 cut(s)	13, 46, 1240, 1529
Cfr42I	CCGCGG	1 cut(s)	179
CseI	GACGC	1 cut(s)	100
Csp6I	GTAC	3 cut(s)	152, 654, 1220
CspCI	CAANNNNNGTGG	2 cut(s)	1534, 1569
CviQI	GTAC	3 cut(s)	152, 654, 1220
DdeI	CTNAG	4 cut(s)	120, 155, 1064, 1358
DpnI	GATC	8 cut(s)	125, 206, 375, 474, 513, 1604, 1743, 1779
DpnII	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
DraI	TTTAAA	1 cut(s)	1506
DraIII	CACNNNGTG	1 cut(s)	455
EaeI	YGGCCR	4 cut(s)	179, 289, 1555, 1588
EagI	CGGCCG	1 cut(s)	179
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	1474
EclXI	CGGCCG	1 cut(s)	179
Eco130I	CCWWGG	3 cut(s)	250, 660, 1718
Eco24I	GRGCYC	1 cut(s)	1476
Eco32I	GATATC	1 cut(s)	541
Eco47I	GGWCC	3 cut(s)	13, 46, 1529
Eco52I	CGGCCG	1 cut(s)	179
Eco53kI	GAGCTC	1 cut(s)	1474
Eco57I	CTGAAG	3 cut(s)	1211, 1387, 1680
EcoICRI	GAGCTC	1 cut(s)	1474
EcoO109I	RGGNCCY	3 cut(s)	13, 46, 1240
EcoRI	GAATTC	2 cut(s)	1059, 1825
EcoRII	CCWGG	4 cut(s)	721, 1137, 1414, 1651
EcoRV	GATATC	1 cut(s)	541
EcoT14I	CCWWGG	3 cut(s)	250, 660, 1718
EcoT22I	ATGCAT	1 cut(s)	801
EcoT38I	GRGCYC	1 cut(s)	1476
ErhI	CCWWGG	3 cut(s)	250, 660, 1718
Esp3I	CGTCTC	1 cut(s)	639
FaqI	GGGAC	3 cut(s)	146, 1010, 1511
Fnu4HI	GCNGC	8 cut(s)	95, 176, 179, 182, 247, 621, 1374, 1641
FokI	GGATG	2 cut(s)	1340, 1640
FriOI	GRGCYC	1 cut(s)	1476
Fsp4HI	GCNGC	8 cut(s)	95, 176, 179, 182, 247, 621, 1374, 1641
FspBI	CTAG	4 cut(s)	36, 243, 1253, 1719
FspI	TGCGCA	1 cut(s)	628
GlaI	GCGC	1 cut(s)	628
GluI	GCNGC	8 cut(s)	95, 176, 179, 182, 247, 621, 1374, 1641
GsaI	CCCAGC	1 cut(s)	1389
GsuI	CTGGAG	3 cut(s)	760, 1321, 1365
HaeIII	GGCC	7 cut(s)	181, 188, 291, 1241, 1557, 1590, 1803
HapII	CCGG	3 cut(s)	899, 1526, 1707
HgaI	GACGC	1 cut(s)	100
HhaI	GCGC	1 cut(s)	629
Hin6I	GCGC	1 cut(s)	627
HinP1I	GCGC	1 cut(s)	627
HincII	GTYRAC	3 cut(s)	1012, 1123, 1381
HindII	GTYRAC	3 cut(s)	1012, 1123, 1381
HindIII	AAGCTT	1 cut(s)	1712
HinfI	GANTC	7 cut(s)	39, 255, 575, 994, 1033, 1068, 1248
HpaII	CCGG	3 cut(s)	899, 1526, 1707
HphI	GGTGA	3 cut(s)	811, 1534, 1775
Hpy166II	GTNNAC	5 cut(s)	152, 1012, 1077, 1123, 1381
Hpy188I	TCNGA	4 cut(s)	868, 910, 1065, 1191
Hpy188III	TCNNGA	6 cut(s)	127, 377, 413, 515, 1344, 1732
Hpy8I	GTNNAC	5 cut(s)	152, 1012, 1077, 1123, 1381
HpyAV	CCTTC	3 cut(s)	577, 905, 1655
HpyCH4III	ACNGT	6 cut(s)	67, 650, 685, 760, 1502, 1738
HpyCH4IV	ACGT	1 cut(s)	103
HpyF10VI	GCNNNNNNNGC	8 cut(s)	91, 168, 181, 308, 626, 1163, 1370, 1637
HpyF3I	CTNAG	4 cut(s)	120, 155, 1064, 1358
HpySE526I	ACGT	1 cut(s)	103
HspAI	GCGC	1 cut(s)	627
KspI	CCGCGG	1 cut(s)	179
Kzo9I	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
LmnI	GCTCC	4 cut(s)	168, 1346, 1479, 1752
Lsp1109I	GCAGC	3 cut(s)	106, 1360, 1627
LweI	GCATC	5 cut(s)	268, 675, 786, 1036, 1618
MaeI	CTAG	4 cut(s)	36, 243, 1253, 1719
MaeII	ACGT	1 cut(s)	103
MaeIII	GTNAC	7 cut(s)	491, 500, 817, 1306, 1429, 1672, 1763
MalI	GATC	8 cut(s)	125, 206, 375, 474, 513, 1604, 1743, 1779
MboI	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
MboII	GAAGA	6 cut(s)	31, 400, 805, 1178, 1204, 1393
MfeI	CAATTG	1 cut(s)	1515
MflI	RGATCY	3 cut(s)	373, 472, 511
MhlI	GDGCHC	1 cut(s)	1476
MlsI	TGGCCA	2 cut(s)	291, 1557
MluNI	TGGCCA	2 cut(s)	291, 1557
MlyI	GAGTC	2 cut(s)	1042, 1077
MmeI	TCCRAC	2 cut(s)	622, 1447
MnlI	CCTC	7 cut(s)	123, 158, 333, 502, 1164, 1231, 1793
Mox20I	TGGCCA	2 cut(s)	291, 1557
Mph1103I	ATGCAT	1 cut(s)	801
MscI	TGGCCA	2 cut(s)	291, 1557
MseI	TTAA	7 cut(s)	435, 831, 843, 972, 1053, 1505, 1821
MslI	CAYNNNNRTG	5 cut(s)	297, 716, 761, 953, 959
Msp20I	TGGCCA	2 cut(s)	291, 1557
MspA1I	CMGCKG	5 cut(s)	97, 119, 178, 572, 1373
MspCI	CTTAAG	2 cut(s)	830, 842
MspI	CCGG	3 cut(s)	899, 1526, 1707
MspR9I	CCNGG	5 cut(s)	723, 1139, 1416, 1527, 1653
MunI	CAATTG	1 cut(s)	1515
MvaI	CCWGG	4 cut(s)	723, 1139, 1416, 1653
MvnI	CGCG	1 cut(s)	178
MwoI	GCNNNNNNNGC	8 cut(s)	91, 168, 181, 308, 626, 1163, 1370, 1637
NciI	CCSGG	1 cut(s)	1527
NdeII	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
NlaIV	GGNNCC	7 cut(s)	15, 375, 513, 966, 1242, 1348, 1530
NmuCI	GTSAC	4 cut(s)	817, 1306, 1429, 1763
NotI	GCGGCCGC	1 cut(s)	179
NsbI	TGCGCA	1 cut(s)	628
NsiI	ATGCAT	1 cut(s)	801
NspI	RCATGY	2 cut(s)	721, 803
PaeI	GCATGC	1 cut(s)	803
PagI	TCATGA	1 cut(s)	126
PfeI	GAWTC	5 cut(s)	39, 255, 575, 994, 1248
PflFI	GACNNNGTC	1 cut(s)	956
PflMI	CCANNNNNTGG	1 cut(s)	599
PkrI	GCNGC	8 cut(s)	96, 177, 180, 183, 248, 622, 1375, 1642
PleI	GAGTC	2 cut(s)	1041, 1076
PpsI	GAGTC	2 cut(s)	1041, 1076
PpuMI	RGGWCCY	2 cut(s)	13, 46
PsiI	TTATAA	1 cut(s)	306
Psp124BI	GAGCTC	1 cut(s)	1476
Psp5II	RGGWCCY	2 cut(s)	13, 46
Psp6I	CCWGG	4 cut(s)	721, 1137, 1414, 1651
PspFI	CCCAGC	1 cut(s)	1385
PspGI	CCWGG	4 cut(s)	721, 1137, 1414, 1651
PspN4I	GGNNCC	7 cut(s)	15, 375, 513, 966, 1242, 1348, 1530
PspPI	GGNCC	4 cut(s)	13, 46, 1240, 1529
PspPPI	RGGWCCY	2 cut(s)	13, 46
PstI	CTGCAG	2 cut(s)	470, 1378
PsuI	RGATCY	3 cut(s)	373, 472, 511
PsyI	GACNNNGTC	1 cut(s)	956
PvuII	CAGCTG	4 cut(s)	97, 119, 572, 1373
RsaI	GTAC	3 cut(s)	153, 655, 1221
RsaNI	GTAC	3 cut(s)	152, 654, 1220
RseI	CAYNNNNRTG	5 cut(s)	297, 716, 761, 953, 959
SacI	GAGCTC	1 cut(s)	1476
SacII	CCGCGG	1 cut(s)	179
SaqAI	TTAA	7 cut(s)	435, 831, 843, 972, 1053, 1505, 1821
SatI	GCNGC	8 cut(s)	95, 176, 179, 182, 247, 621, 1374, 1641
Sau3AI	GATC	8 cut(s)	123, 204, 373, 472, 511, 1602, 1741, 1777
Sau96I	GGNCC	4 cut(s)	13, 46, 1240, 1529
ScaI	AGTACT	1 cut(s)	1221
SchI	GAGTC	2 cut(s)	1042, 1077
ScrFI	CCNGG	5 cut(s)	723, 1139, 1416, 1527, 1653
SduI	GDGCHC	1 cut(s)	1476
SfaNI	GCATC	5 cut(s)	268, 675, 786, 1036, 1618
SfcI	CTRYAG	2 cut(s)	466, 1374
Sfr303I	CCGCGG	1 cut(s)	179
SgrBI	CCGCGG	1 cut(s)	179
SinI	GGWCC	3 cut(s)	13, 46, 1529
SmiMI	CAYNNNNRTG	5 cut(s)	297, 716, 761, 953, 959
SmlI	CTYRAG	2 cut(s)	830, 842
SmoI	CTYRAG	2 cut(s)	830, 842
SphI	GCATGC	1 cut(s)	803
SsiI	CCGC	8 cut(s)	162, 176, 178, 182, 247, 461, 620, 1484
SspMI	CTAG	4 cut(s)	36, 243, 1253, 1719
SstI	GAGCTC	1 cut(s)	1476
StyD4I	CCNGG	5 cut(s)	721, 1137, 1414, 1525, 1651
StyI	CCWWGG	3 cut(s)	250, 660, 1718
TaaI	ACNGT	6 cut(s)	67, 650, 685, 760, 1502, 1738
TaiI	ACGT	1 cut(s)	106
TaqI	TCGA	3 cut(s)	414, 882, 1605
TatI	WGTACW	2 cut(s)	151, 1219
TauI	GCSGC	5 cut(s)	178, 181, 184, 249, 623
TfiI	GAWTC	5 cut(s)	39, 255, 575, 994, 1248
Tru1I	TTAA	7 cut(s)	435, 831, 843, 972, 1053, 1505, 1821
Tru9I	TTAA	7 cut(s)	435, 831, 843, 972, 1053, 1505, 1821
TscAI	CASTG	4 cut(s)	154, 763, 1173, 1411
TseFI	GTSAC	4 cut(s)	817, 1306, 1429, 1763
TseI	GCWGC	3 cut(s)	94, 1373, 1640
Tsp45I	GTSAC	4 cut(s)	817, 1306, 1429, 1763
TspDTI	ATGAA	6 cut(s)	225, 275, 893, 976, 1608, 1769
TspGWI	ACGGA	2 cut(s)	595, 1779
TspRI	CASTG	4 cut(s)	154, 763, 1173, 1411
Tth111I	GACNNNGTC	1 cut(s)	956
Van91I	CCANNNNNTGG	1 cut(s)	599
Vha464I	CTTAAG	2 cut(s)	830, 842
VpaK11BI	GGWCC	3 cut(s)	13, 46, 1529
XapI	RAATTY	3 cut(s)	1059, 1507, 1825
XceI	RCATGY	2 cut(s)	721, 803
XmaJI	CCTAGG	1 cut(s)	1718
XspI	CTAG	4 cut(s)	36, 243, 1253, 1719
ZrmI	AGTACT	1 cut(s)	1221
Zsp2I	ATGCAT	1 cut(s)	801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.