Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000625

Physical Location & Seq

Genomic Coordinates Reverse (-)

20240534 .. 20244918

Gene Structure 4385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g28352.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGCGAGGGTGCTGCTTCTTGTGCTATGCCTGTGTATAGAGGCGGCGGCGGCGACCGGAACAGCAGAAGCAGCAGGTGGAGGAGGATACCTGAAATATAAGGACCCAAAACAGCCCTTGAATACAAGGATCAAGGACCTCCTGGGCCGGATGACTCTGGAGGAAAAGATTGGCCAGATGACGCAGATAGAGCGCAGTGTTGCTTCAGCTGAGGTCATGAACAAGTACTACATTGGGAGTGTCCTGAGCGGCGGTGGGAGTGTACCCTCAAAACAAGCTTCTGCAGAGACTTGGGTTGCAATGGTGAACGATTTTCAAAAGGGTTCTCTATCAACTCGCCTCGGTATTCCGATGATTTATGGTATCGATGCTGTTCATGGCCACAACAATGTCTACAAGGCAACAATCTTCCCTCACAATGTTGGCCTCGGAGCTACCAGGGACCCTGAACTCGTTAAGAAGATTGGGGCTGCAACTGCCCTTGAAGTTAGAGCCACAGGCATTCCATACGTCTTTGCACCTTGCATAGCGGTTTGTAGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTACAGCGAAGATCATAAGATTGTTCAAGCAATGACTCAGATCATACCTGGATTACAAGGAGACATGCCACCTAACTCTAGAAAGGGTGTTCCCTTTGTAGCACCTGGAAACAAAAAGGTTGCAGCTTGTGCAAAGCATTATGTGGGCGATGGTGGGACAACCAAAGGCATCAATGAGAATAACACTGTGATAGACAGGCATGGATTTCTCAGCATTCACATGCCGGCCTACTATAACTCAATTATTGAAGGTGTTGCAACCATTATGGTATCTTACTCCAGCTGGAATGGAGTCAAGATGCATGCCAACCGTGATATGGTCACCGGATTTCTCAAGAATACTCTCCGTTTCAGGGGTTTTGTCATCTCAGATTGGGAGGGTATTGACAGAATCACCTCACCACCTCATGCCAACTACTCATACTCGATTACAGCAGGGATCAATGCTGGAATTGACATGATCATGGTTCCAAACAACTATACAGAATTCATTGATGGTCTAACTTTCCAAGTAAAAAATAAAATTATTCCCATGAGCAGAATTGATGATGCAGTGAGGAGAATTTTGAGGGTTAAGTTTACAATGGGGCTATTTGAGAATCGGTTGGCTGATCTCAGCCTTGTCAACCAGCTTGGCAGTCAGGAACACAGAGACTTGGCTCGGGAAGCTGTTAGGCGATCTTTAGTGCTTCTAACGAATGGTGAATCTGCAGACGAGCCATTGCTACCCCTTCCAAAGAAGACATCAAAAATACTTGTAGCTGGAAGTCATGCAGACAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGAATGAGTGGCAACAATCTCACACATGGTACCACAATCCTAACTGGTATAAAGAACACAGTTGATCCAGAAACGAAAGTAGTGTACAAAGAGAATCCTGATGCCGAGTATGTTAAGTCAAATGGTTTCTCCTATGCCATTGTTGTCGTAGGAGAACCGCCATATGCGGAGACATTTGGTGACAGTTTAAATTTGACTCTCCCTGATGCTGGCCTGAAAACCATTACAAATGTTTGCGGTGCTGTCAAGTGTGTTGTCGTTGTCGTCTCCGGTCGTCCTGTTGTGATGCAACCATATGTTTCCCTGCTAGATGCTCTGGTTGCGGCATGGCTTCCGGGAAGTGAAGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGACTATGGTTTCACCGGCAAGCTTTCTCGCACTTGGTTTAAAACCGTTGATCAGCTACCTATGAATGTTGGAGATCCACATTATGACCCTCTCTTCCCCTTTGGATTTGGCCTCACAACAGCTCCCACAAAAGCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0042597 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

635

Amino Acids

68.75

Weight (kDa)

8.2

Isoelectric Point (pI)

31.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	52 - 381	5.5e-69	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	419 - 627	1.3e-38	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47010 AT3G47040 AT3G47050
fragaria_vesca	FvH4_1g28352 FvH4_3g26960 FvH4_7g05180
malus_domestica	MD02G1089300.v1.1 MD02G1259900.v1.1 MD14G1004400.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G092700_v2.0.a1 Prupe.7G007100_v2.0.a1 Prupe.7G007700_v2.0.a1
pyrus_communis	pycom02g22100 pycom07g04670 pycom11g06820 pycom11g15190 pycom14g00200 pycom14g00230
rosa_chinensis	RchiOBHm_Chr5g0049431 RchiOBHm_Chr5g0049441 RchiOBHm_Chr5g0079371 RchiOBHm_Chr6g0274311
rosa_laevigata	RLG00000006403 RLG00000008403 RLG00000028847 RLG00000034618
rosa_multiflora	Rmu_co8385859.1_g000001 Rmu_sc0000376.1_g000001 Rmu_sc0001307.1_g000017 Rmu_sc0001307.1_g000019 Rmu_sc0001900.1_g000031 Rmu_sc0002912.1_g000028 Rmu_sc0006084.1_g000018 Rmu_sc0006888.1_g000063 Rmu_sc0014052.1_g000002 Rmu_sc0014052.1_g000004 Rmu_sc0022931.1_g000004
rosa_roxburghii	Rroxscaffold_1G00003570 Rroxscaffold_1G00032240 Rroxscaffold_1G00032250 Rroxscaffold_2G00103090 Rroxscaffold_4G00289090 Rroxscaffold_5G00336970
rosa_rugosa	Rorug03G0185900 Rorug04G0020500 Rorug04G0020600 Rorug04G0020600 Rorug04G0020700.1 Rorug04G0020800.1 Rorug04G0020900 Rorug04G0020900 Rorug04G0020900 Rorug05G0248500 Rorug05G0248500 Rorug05G0248500 Rorug05G0248600 Rorug05G0465800
rosa_samantha	Rh3CG363400 Rh4DG330500 Rh4DG330600 Rh5AG245600 Rh5AG516800 Rh5AG517600 Rh5AG519000 Rh5AG519500 Rh5BG335900 Rh5BG336000 Rh5BG540700 Rh5BG542700 Rh5DG348200 Rh5DG348300 Rh5DG551900 Rh6BG185500 Rh7DG265300
rosa_wichuraiana	Rw1G018240 Rw4G028270 Rw5G030690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	65
Acc36I	ACCTGC	1 cut(s)	65
Acc65I	GGTACC	1 cut(s)	1418
AccB1I	GGYRCC	1 cut(s)	1418
AccB7I	CCANNNNNTGG	1 cut(s)	1383
AccBSI	CCGCTC	1 cut(s)	249
AccI	GTMKAC	1 cut(s)	393
AclWI	GGATC	5 cut(s)	137, 536, 1016, 1448, 1832
AcoI	YGGCCR	2 cut(s)	172, 379
AcsI	RAATTY	3 cut(s)	1055, 1131, 1579
AcuI	CTGAAG	1 cut(s)	189
AfaI	GTAC	4 cut(s)	227, 264, 1420, 1475
AfiI	CCNNNNNNNGG	5 cut(s)	551, 886, 922, 1383, 1598
AgsI	TTSAA	5 cut(s)	121, 317, 485, 596, 818
AjnI	CCWGG	4 cut(s)	141, 437, 616, 673
Alw26I	GTCTC	5 cut(s)	281, 624, 1215, 1553, 1660
AlwI	GGATC	5 cut(s)	137, 536, 1016, 1448, 1832
Ama87I	CYCGRG	1 cut(s)	1230
AoxI	GGCC	8 cut(s)	145, 172, 379, 424, 795, 1600, 1735, 1873
ApeKI	GCWGC	4 cut(s)	13, 71, 470, 692
ApoI	RAATTY	3 cut(s)	1055, 1131, 1579
Asp718I	GGTACC	1 cut(s)	1418
AspLEI	GCGC	1 cut(s)	195
AspS9I	GGNCC	5 cut(s)	103, 136, 145, 442, 1374
AsuC2I	CCSGG	1 cut(s)	1725
AsuHPI	GGTGA	8 cut(s)	316, 883, 955, 960, 1283, 1580, 1768, 1775
AvaI	CYCGRG	1 cut(s)	1230
AvaII	GGWCC	4 cut(s)	103, 136, 442, 1374
BalI	TGGCCA	2 cut(s)	174, 381
BanI	GGYRCC	1 cut(s)	1418
BbsI	GAAGAC	1 cut(s)	1316
BbvCI	CCTCAGC	1 cut(s)	210
BbvI	GCAGC	3 cut(s)	83, 457, 704
BccI	CCATC	3 cut(s)	543, 713, 1058
BcgI	CGANNNNNNTGC	1 cut(s)	29
BciT130I	CCWGG	4 cut(s)	143, 439, 618, 675
BciVI	GTATCC	1 cut(s)	80
BclI	TGATCA	2 cut(s)	1029, 1813
BcnI	CCSGG	1 cut(s)	1725
BcoDI	GTCTC	5 cut(s)	281, 624, 1215, 1553, 1660
BfaI	CTAG	3 cut(s)	648, 1697, 1903
BfmI	CTRYAG	3 cut(s)	282, 571, 1278
BfuAI	ACCTGC	1 cut(s)	65
BfuI	GTATCC	1 cut(s)	80
BisI	GCNGC	9 cut(s)	14, 45, 48, 51, 72, 250, 471, 693, 1713
BlsI	GCNGC	9 cut(s)	15, 46, 49, 52, 73, 251, 472, 694, 1714
BmcAI	AGTACT	1 cut(s)	227
Bme1390I	CCNGG	5 cut(s)	143, 439, 618, 675, 1725
Bme18I	GGWCC	4 cut(s)	103, 136, 442, 1374
BmeT110I	CYCGRG	1 cut(s)	1230
BmgT120I	GGNCC	5 cut(s)	103, 136, 145, 442, 1374
BmiI	GGNNCC	5 cut(s)	105, 443, 444, 1038, 1420
BmrFI	CCNGG	5 cut(s)	143, 439, 618, 675, 1725
BmsI	GCATC	8 cut(s)	358, 747, 858, 1108, 1480, 1585, 1665, 1690
BpiI	GAAGAC	1 cut(s)	1316
BpmI	CTGGAG	2 cut(s)	179, 832
Bpu10I	CCTNAGC	2 cut(s)	210, 245
BpuEI	CTTGAG	1 cut(s)	887
BpuMI	CCSGG	1 cut(s)	1725
Bsa29I	ATCGAT	1 cut(s)	366
BsaJI	CCNNGG	5 cut(s)	142, 340, 427, 438, 1738
BsaWI	WCCGGW	3 cut(s)	56, 893, 1658
BsaXI	ACNNNNNCTCC	2 cut(s)	1870, 1900
Bsc4I	CCNNNNNNNGG	5 cut(s)	551, 886, 922, 1383, 1598
Bse118I	RCCGGY	2 cut(s)	793, 1778
Bse1I	ACTGG	1 cut(s)	1438
Bse3DI	GCAATG	3 cut(s)	306, 606, 1289
BseBI	CCWGG	4 cut(s)	143, 439, 618, 675
BseCI	ATCGAT	1 cut(s)	366
BseDI	CCNNGG	5 cut(s)	142, 340, 427, 438, 1738
BseGI	GGATG	1 cut(s)	156
BseLI	CCNNNNNNNGG	5 cut(s)	551, 886, 922, 1383, 1598
BseMI	GCAATG	3 cut(s)	306, 606, 1289
BseMII	CTCAG	6 cut(s)	201, 236, 620, 793, 951, 1198
BseNI	ACTGG	1 cut(s)	1438
BseRI	GAGGAG	2 cut(s)	96, 1141
BseXI	GCAGC	3 cut(s)	83, 457, 704
Bsh1285I	CGRYCG	2 cut(s)	57, 1663
BshFI	GGCC	8 cut(s)	147, 174, 381, 426, 797, 1602, 1737, 1875
BshNI	GGYRCC	1 cut(s)	1418
BshVI	ATCGAT	1 cut(s)	366
BsiEI	CGRYCG	2 cut(s)	57, 1663
BsiHKCI	CYCGRG	1 cut(s)	1230
BsiSI	CCGG	7 cut(s)	57, 148, 794, 894, 1659, 1724, 1779
BslFI	GGGAC	2 cut(s)	455, 739
BslI	CCNNNNNNNGG	5 cut(s)	551, 886, 922, 1383, 1598
BsmAI	GTCTC	5 cut(s)	281, 624, 1215, 1553, 1660
BsmBI	CGTCTC	1 cut(s)	1660
BsmFI	GGGAC	2 cut(s)	455, 739
BsmI	GAATGC	2 cut(s)	501, 783
BsnI	GGCC	8 cut(s)	147, 174, 381, 426, 797, 1602, 1737, 1875
BsoBI	CYCGRG	1 cut(s)	1230
Bsp1407I	TGTACA	1 cut(s)	1473
BspANI	GGCC	8 cut(s)	147, 174, 381, 426, 797, 1602, 1737, 1875
BspCNI	CTCAG	6 cut(s)	202, 237, 619, 792, 950, 1197
BspDI	ATCGAT	1 cut(s)	366
BspHI	TCATGA	1 cut(s)	216
BspLI	GGNNCC	5 cut(s)	105, 443, 444, 1038, 1420
BspMAI	CTGCAG	2 cut(s)	286, 1282
BspMI	ACCTGC	1 cut(s)	65
BspPI	GGATC	5 cut(s)	137, 536, 1016, 1448, 1832
BspT107I	GGYRCC	1 cut(s)	1418
BsrBI	CCGCTC	1 cut(s)	249
BsrDI	GCAATG	3 cut(s)	306, 606, 1289
BsrFI	RCCGGY	2 cut(s)	793, 1778
BsrGI	TGTACA	1 cut(s)	1473
BsrI	ACTGG	1 cut(s)	1438
BssAI	RCCGGY	2 cut(s)	793, 1778
BssECI	CCNNGG	5 cut(s)	142, 340, 427, 438, 1738
BssT1I	CCWWGG	1 cut(s)	1738
Bst2UI	CCWGG	4 cut(s)	143, 439, 618, 675
Bst4CI	ACNGT	5 cut(s)	757, 881, 1450, 1574, 1810
Bst6I	CTCTTC	1 cut(s)	1862
BstAPI	GCANNNNNTGC	1 cut(s)	698
BstAUI	TGTACA	1 cut(s)	1473
BstC8I	GCNNGC	4 cut(s)	795, 873, 1600, 1784
BstDEI	CTNAG	6 cut(s)	210, 245, 606, 779, 937, 1184
BstEII	GGTNACC	1 cut(s)	889
BstF5I	GGATG	1 cut(s)	156
BstHHI	GCGC	1 cut(s)	195
BstMAI	GTCTC	5 cut(s)	281, 624, 1215, 1553, 1660
BstMCI	CGRYCG	2 cut(s)	57, 1663
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 50, 71, 190, 476, 698, 1235, 1709
BstNI	CCWGG	4 cut(s)	143, 439, 618, 675
BstNSI	RCATGY	3 cut(s)	637, 793, 875
BstPI	GGTNACC	1 cut(s)	889
BstSCI	CCNGG	5 cut(s)	141, 437, 616, 673, 1723
BstSFI	CTRYAG	3 cut(s)	282, 571, 1278
BstV1I	GCAGC	3 cut(s)	83, 457, 704
BstV2I	GAAGAC	1 cut(s)	1316
BstX2I	RGATCY	2 cut(s)	541, 1837
BstYI	RGATCY	2 cut(s)	541, 1837
Bsu15I	ATCGAT	1 cut(s)	366
BsuI	GTATCC	1 cut(s)	80
BsuRI	GGCC	8 cut(s)	147, 174, 381, 426, 797, 1602, 1737, 1875
BsuTUI	ATCGAT	1 cut(s)	366
BtgZI	GCGATG	1 cut(s)	732
BtsCI	GGATG	1 cut(s)	156
BtsI	GCAGTG	2 cut(s)	202, 1128
BtsIMutI	CAGTG	4 cut(s)	202, 753, 1128, 1367
BveI	ACCTGC	1 cut(s)	65
Cac8I	GCNNGC	4 cut(s)	795, 873, 1600, 1784
CciI	TCATGA	1 cut(s)	216
CfoI	GCGC	1 cut(s)	195
Cfr10I	RCCGGY	2 cut(s)	793, 1778
Cfr13I	GGNCC	5 cut(s)	103, 136, 145, 442, 1374
ClaI	ATCGAT	1 cut(s)	366
CseI	GACGC	1 cut(s)	190
Csp6I	GTAC	4 cut(s)	226, 263, 1419, 1474
CviQI	GTAC	4 cut(s)	226, 263, 1419, 1474
DdeI	CTNAG	6 cut(s)	210, 245, 606, 779, 937, 1184
DraI	TTTAAA	2 cut(s)	1578, 1804
EaeI	YGGCCR	2 cut(s)	172, 379
Eam1104I	CTCTTC	1 cut(s)	1862
EarI	CTCTTC	1 cut(s)	1862
Eco130I	CCWWGG	1 cut(s)	1738
Eco47I	GGWCC	4 cut(s)	103, 136, 442, 1374
Eco57I	CTGAAG	1 cut(s)	189
Eco88I	CYCGRG	1 cut(s)	1230
Eco91I	GGTNACC	1 cut(s)	889
EcoO109I	RGGNCCY	3 cut(s)	103, 136, 442
EcoO65I	GGTNACC	1 cut(s)	889
EcoRI	GAATTC	1 cut(s)	1055
EcoRII	CCWGG	4 cut(s)	141, 437, 616, 673
EcoT14I	CCWWGG	1 cut(s)	1738
EcoT22I	ATGCAT	1 cut(s)	873
ErhI	CCWWGG	1 cut(s)	1738
Esp3I	CGTCTC	1 cut(s)	1660
FaqI	GGGAC	2 cut(s)	455, 739
FauNDI	CATATG	2 cut(s)	1552, 1684
FbaI	TGATCA	2 cut(s)	1029, 1813
FblI	GTMKAC	1 cut(s)	393
Fnu4HI	GCNGC	9 cut(s)	14, 45, 48, 51, 72, 250, 471, 693, 1713
FokI	GGATG	1 cut(s)	163
Fsp4HI	GCNGC	9 cut(s)	14, 45, 48, 51, 72, 250, 471, 693, 1713
FspBI	CTAG	3 cut(s)	648, 1697, 1903
GlaI	GCGC	1 cut(s)	194
GluI	GCNGC	9 cut(s)	14, 45, 48, 51, 72, 250, 471, 693, 1713
GsuI	CTGGAG	2 cut(s)	179, 832
HaeIII	GGCC	8 cut(s)	147, 174, 381, 426, 797, 1602, 1737, 1875
HapII	CCGG	7 cut(s)	57, 148, 794, 894, 1659, 1724, 1779
HgaI	GACGC	1 cut(s)	190
HhaI	GCGC	1 cut(s)	195
Hin6I	GCGC	1 cut(s)	193
HinP1I	GCGC	1 cut(s)	193
HincII	GTYRAC	1 cut(s)	1195
HindII	GTYRAC	1 cut(s)	1195
HindIII	AAGCTT	2 cut(s)	276, 1784
HinfI	GANTC	8 cut(s)	154, 604, 861, 960, 1168, 1274, 1483, 1585
HpaII	CCGG	7 cut(s)	57, 148, 794, 894, 1659, 1724, 1779
HphI	GGTGA	8 cut(s)	316, 883, 955, 960, 1283, 1580, 1768, 1775
Hpy166II	GTNNAC	6 cut(s)	263, 307, 394, 1149, 1195, 1474
Hpy188I	TCNGA	4 cut(s)	351, 431, 609, 940
Hpy8I	GTNNAC	6 cut(s)	263, 307, 394, 1149, 1195, 1474
HpyAV	CCTTC	3 cut(s)	812, 1310, 1727
HpyCH4III	ACNGT	5 cut(s)	757, 881, 1450, 1574, 1810
HpyCH4IV	ACGT	1 cut(s)	510
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 50, 71, 190, 476, 698, 1235, 1709
HpyF3I	CTNAG	6 cut(s)	210, 245, 606, 779, 937, 1184
HpySE526I	ACGT	1 cut(s)	510
HspAI	GCGC	1 cut(s)	193
KflI	GGGWCCC	1 cut(s)	442
KpnI	GGTACC	1 cut(s)	1422
KroI	GCCGGC	1 cut(s)	793
KroNI	GCCGGC	1 cut(s)	795
Ksp22I	TGATCA	2 cut(s)	1029, 1813
LmnI	GCTCC	2 cut(s)	431, 1891
Lsp1109I	GCAGC	3 cut(s)	83, 457, 704
LweI	GCATC	8 cut(s)	358, 747, 858, 1108, 1480, 1585, 1665, 1690
MaeI	CTAG	3 cut(s)	648, 1697, 1903
MaeII	ACGT	1 cut(s)	510
MaeIII	GTNAC	4 cut(s)	560, 889, 1568, 1763
MbiI	CCGCTC	1 cut(s)	249
MboII	GAAGA	5 cut(s)	400, 472, 590, 1321, 1849
MflI	RGATCY	2 cut(s)	541, 1837
MlsI	TGGCCA	2 cut(s)	174, 381
MluCI	AATT	7 cut(s)	810, 1020, 1055, 1092, 1110, 1131, 1579
MluNI	TGGCCA	2 cut(s)	174, 381
MlyI	GAGTC	4 cut(s)	148, 598, 870, 1579
MmeI	TCCRAC	2 cut(s)	1352, 1813
Mox20I	TGGCCA	2 cut(s)	174, 381
Mph1103I	ATGCAT	1 cut(s)	873
MroNI	GCCGGC	1 cut(s)	793
MscI	TGGCCA	2 cut(s)	174, 381
MseI	TTAA	5 cut(s)	456, 1143, 1503, 1577, 1803
MslI	CAYNNNNRTG	3 cut(s)	387, 788, 1031
Msp20I	TGGCCA	2 cut(s)	174, 381
MspA1I	CMGCKG	2 cut(s)	209, 852
MspI	CCGG	7 cut(s)	57, 148, 794, 894, 1659, 1724, 1779
MspR9I	CCNGG	5 cut(s)	143, 439, 618, 675, 1725
Mva1269I	GAATGC	2 cut(s)	501, 783
MvaI	CCWGG	4 cut(s)	143, 439, 618, 675
MwoI	GCNNNNNNNGC	8 cut(s)	22, 50, 71, 190, 476, 698, 1235, 1709
NaeI	GCCGGC	1 cut(s)	795
NciI	CCSGG	1 cut(s)	1725
NdeI	CATATG	2 cut(s)	1552, 1684
NgoMIV	GCCGGC	1 cut(s)	793
NlaIV	GGNNCC	5 cut(s)	105, 443, 444, 1038, 1420
NmeAIII	GCCGAG	1 cut(s)	1519
NmuCI	GTSAC	3 cut(s)	889, 1568, 1763
NsiI	ATGCAT	1 cut(s)	873
NspI	RCATGY	3 cut(s)	637, 793, 875
PaeI	GCATGC	1 cut(s)	875
PagI	TCATGA	1 cut(s)	216
PaqCI	CACCTGC	1 cut(s)	65
PctI	GAATGC	2 cut(s)	501, 783
PdiI	GCCGGC	1 cut(s)	795
PfeI	GAWTC	4 cut(s)	960, 1168, 1274, 1483
PflMI	CCANNNNNTGG	1 cut(s)	1383
PfoI	TCCNGGA	1 cut(s)	1723
PkrI	GCNGC	9 cut(s)	15, 46, 49, 52, 73, 251, 472, 694, 1714
PleI	GAGTC	4 cut(s)	148, 598, 869, 1579
PpsI	GAGTC	4 cut(s)	148, 598, 869, 1579
PpuMI	RGGWCCY	3 cut(s)	103, 136, 442
Psp5II	RGGWCCY	3 cut(s)	103, 136, 442
Psp6I	CCWGG	4 cut(s)	141, 437, 616, 673
PspEI	GGTNACC	1 cut(s)	889
PspGI	CCWGG	4 cut(s)	141, 437, 616, 673
PspN4I	GGNNCC	5 cut(s)	105, 443, 444, 1038, 1420
PspPI	GGNCC	5 cut(s)	103, 136, 145, 442, 1374
PspPPI	RGGWCCY	3 cut(s)	103, 136, 442
PsrI	GAACNNNNNNTAC	2 cut(s)	212, 244
PstI	CTGCAG	2 cut(s)	286, 1282
PsuI	RGATCY	2 cut(s)	541, 1837
PvuII	CAGCTG	2 cut(s)	209, 852
RsaI	GTAC	4 cut(s)	227, 264, 1420, 1475
RsaNI	GTAC	4 cut(s)	226, 263, 1419, 1474
RseI	CAYNNNNRTG	3 cut(s)	387, 788, 1031
SaqAI	TTAA	5 cut(s)	456, 1143, 1503, 1577, 1803
SatI	GCNGC	9 cut(s)	14, 45, 48, 51, 72, 250, 471, 693, 1713
Sau96I	GGNCC	5 cut(s)	103, 136, 145, 442, 1374
ScaI	AGTACT	1 cut(s)	227
SchI	GAGTC	4 cut(s)	148, 598, 870, 1579
ScrFI	CCNGG	5 cut(s)	143, 439, 618, 675, 1725
SfaNI	GCATC	8 cut(s)	358, 747, 858, 1108, 1480, 1585, 1665, 1690
SfcI	CTRYAG	3 cut(s)	282, 571, 1278
SinI	GGWCC	4 cut(s)	103, 136, 442, 1374
SmiMI	CAYNNNNRTG	3 cut(s)	387, 788, 1031
SmlI	CTYRAG	1 cut(s)	902
SmoI	CTYRAG	1 cut(s)	902
SphI	GCATGC	1 cut(s)	875
Sse9I	AATT	7 cut(s)	810, 1020, 1055, 1092, 1110, 1131, 1579
SspMI	CTAG	3 cut(s)	648, 1697, 1903
StyD4I	CCNGG	5 cut(s)	141, 437, 616, 673, 1723
StyI	CCWWGG	1 cut(s)	1738
TaaI	ACNGT	5 cut(s)	757, 881, 1450, 1574, 1810
TaiI	ACGT	1 cut(s)	513
TaqI	TCGA	2 cut(s)	366, 995
TasI	AATT	7 cut(s)	810, 1020, 1055, 1092, 1110, 1131, 1579
TatI	WGTACW	2 cut(s)	225, 1473
TauI	GCSGC	5 cut(s)	47, 50, 53, 252, 1715
TfiI	GAWTC	4 cut(s)	960, 1168, 1274, 1483
Tru1I	TTAA	5 cut(s)	456, 1143, 1503, 1577, 1803
Tru9I	TTAA	5 cut(s)	456, 1143, 1503, 1577, 1803
TscAI	CASTG	4 cut(s)	202, 760, 1128, 1367
TseFI	GTSAC	3 cut(s)	889, 1568, 1763
TseI	GCWGC	4 cut(s)	13, 71, 470, 692
Tsp45I	GTSAC	3 cut(s)	889, 1568, 1763
TspDTI	ATGAA	4 cut(s)	233, 365, 1048, 1841
TspGWI	ACGGA	1 cut(s)	905
TspRI	CASTG	4 cut(s)	202, 760, 1128, 1367
Van91I	CCANNNNNTGG	1 cut(s)	1383
VpaK11BI	GGWCC	4 cut(s)	103, 136, 442, 1374
XapI	RAATTY	3 cut(s)	1055, 1131, 1579
XbaI	TCTAGA	1 cut(s)	647
XceI	RCATGY	3 cut(s)	637, 793, 875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	883
XmiI	GTMKAC	1 cut(s)	393
XspI	CTAG	3 cut(s)	648, 1697, 1903
ZrmI	AGTACT	1 cut(s)	227
Zsp2I	ATGCAT	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.