Rw5G030690

xylan 1,4-beta-xylosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000625
Physical Location & Seq
Reverse (-)
48808395 .. 48814094
5700 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G030690.1

Sequence Viewer

Length: 1995 bp
ATGAAAAGGATAAATTCTTCAGTCCTGTTAGTGGGACTTGCGTGCCTATGTTGCTGGGCGGCCATGACAGAAGCAAGATTATCTAGACAGCACAGGAAACTAGAAGATAATGAATACATGGCATACAAAGACCCTTGGCAGCCAATTGAGACTCGAATAAATGACCTTATGGATCGAATGACACTAGACGAGAAGGTTGCTCAAATGGCGCAGCTGGACCGTGGTAGTGTCACGGAGGAGCTCATGAAGGAACACAACATAGGAAGTGTACTGAATGGGGGAGAGAGTTTGCCAAGAGTTGGACTTACTGCGTATGAAGACATCGACATGATCAACAAGTTTCAAAATTGGTCACTTCAAAGCCGGCTTGCAATCCCTATAATTTATGGCATTGATGCCGTTCATGGCCACAATAATGTCTACAAGGCCACATTGTTCCCACATAATGTTGGACTTGGAGTTACCAGGGATCCAGATCTTATTAAGAGGATAGGTGCGGCAACTGCTGCTGAAGTTAAAGCTACCGGCATTCAATATGCATTTTCACCATGTGTTGCGGTCTGCAGAGATCCAAGATGGGGTAGGTGTTATGAAAGTTATAGCGAGGATCCCTCCATTGTAAGACAAATGACTGAAATAATAGCCGGATTGCAAGGCGAAGTCCCAGCTGGACAGAAGGGCCGTCCTTACGTTGGTGGAAAGGAGAAGGTAGCTGGCTGTGCAAAGCACTATGTGGGAGATGGTGGCACCACCAAGGGAATCAATGAGAACAACACTGCCATTGATCGGAATGAACTGTTGAAGATCCACATGCCTGGTTACATGGACTCTATTGACAAGGGTGTGTGCAGTATCATGGTTTCATACTCTAGCTTGAATGGAGTCAAGATGCACGCTAACCATGACCTTGTCACCAACTATCTCAAGGACACCTTGAAGTTCAAGGGTTTTGTCATCTCCGACTGGCAGGGTCTTGACAAAATTACCTATCCGTTCCATTCGAATTACACATACTCGGTTCTTGCTGGTGTTACAGCTGGTCTTGACATGTTCATACTTCCCTTCAACTATACAGAGTTCCATGATACTGTACTCGACCTTCACTTTAAAAACCTAATATCCGACAGCCGCATTGATGATGCAGTGTATAGGATATTGAGGATTAAGTTCATAATGGGTCTGTTCGACAACCCCATGGCTGATTATACCTTCGTTGACCGGCTTGGATGCCAGGCTCATCGAGATCTGGCAAGGGAGGCAGTAAGGAAGTCACTTGTTCTTTTGAAGAACGGAAAAAAACCAAACACACCATTCCTGCCTCTCCCTAAAAAGGCCAATAGGATCCTTGTTGCCGGAACTCATGCAAACAATTTGGGATATCAATGTGGTGGTTGGAGTATCACTTGGCAAGGAGTAAGTGGCAATAACAACACTGTTGGAACCACGATTCTAGGTGGCGTCATAGCTACAGTTTACGCGACAACAGAAGTTGCAAGCAACATTGACTATGCCATTGTTGCTGTTGGTGAACCCCCTTACGCAGAGACGAAAGGGGATAATTTGAATTTGACCATTCCAGAACCAGGCCCAAGCATCATTAGCAATGTCTGCAGCGTAGTCCAGTGTGTTGTTATTGTTGTCTCTGGCCGTCCTCTTGTGATTGAGCCCTATCTTCCAATGATGGATGCCCTTGTGGCTGCATGGCTACCTGGAACTGAAGGCCAAGGAGTTGCTGATGTTCTTTTCGGGGATTATGGATTCACTGGAAAGCTTGCTAGGACTTGGTTCAAGAGAGTAGACCAGCTCCCTATGAATGTTGGTGACAAAAATTATGATCCCCTCTTCCCCTTTGGTTTTGGAATCACAACTGAACCACATATGAGTTATTTAAAAAGTGCATCTGTCGGGAGAAAACTAAGGACCAGAAAGCTAGTGTTGTTGTGCAAAATGGTATTACTCATCACCCTCCAAATATGTGGTTGCTTCCGCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

664

Amino Acids

73.4

Weight (kDa)

8.05

Isoelectric Point (pI)

30.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 61 - 388 1.2e-64 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 425 - 622 2.2e-37 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000625)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47010 AT3G47040 AT3G47050
fragaria_vesca FvH4_1g28352 FvH4_3g26960 FvH4_7g05180
malus_domestica MD02G1089300.v1.1 MD02G1259900.v1.1 MD14G1004400.v1.1
prunus_persica Prupe.2G065700_v2.0.a1 Prupe.2G092700_v2.0.a1 Prupe.7G007100_v2.0.a1 Prupe.7G007700_v2.0.a1
pyrus_communis pycom02g22100 pycom07g04670 pycom11g06820 pycom11g15190 pycom14g00200 pycom14g00230
rosa_chinensis RchiOBHm_Chr5g0049431 RchiOBHm_Chr5g0049441 RchiOBHm_Chr5g0079371 RchiOBHm_Chr6g0274311
rosa_laevigata RLG00000006403 RLG00000008403 RLG00000028847 RLG00000034618
rosa_multiflora Rmu_co8385859.1_g000001 Rmu_sc0000376.1_g000001 Rmu_sc0001307.1_g000017 Rmu_sc0001307.1_g000019 Rmu_sc0001900.1_g000031 Rmu_sc0002912.1_g000028 Rmu_sc0006084.1_g000018 Rmu_sc0006888.1_g000063 Rmu_sc0014052.1_g000002 Rmu_sc0014052.1_g000004 Rmu_sc0022931.1_g000004
rosa_roxburghii Rroxscaffold_1G00003570 Rroxscaffold_1G00032240 Rroxscaffold_1G00032250 Rroxscaffold_2G00103090 Rroxscaffold_4G00289090 Rroxscaffold_5G00336970
rosa_rugosa Rorug03G0185900 Rorug04G0020500 Rorug04G0020600 Rorug04G0020600 Rorug04G0020700.1 Rorug04G0020800.1 Rorug04G0020900 Rorug04G0020900 Rorug04G0020900 Rorug05G0248500 Rorug05G0248500 Rorug05G0248500 Rorug05G0248600 Rorug05G0465800
rosa_samantha Rh3CG363400 Rh4DG330500 Rh4DG330600 Rh5AG245600 Rh5AG516800 Rh5AG517600 Rh5AG519000 Rh5AG519500 Rh5BG335900 Rh5BG336000 Rh5BG540700 Rh5BG542700 Rh5DG348200 Rh5DG348300 Rh5DG551900 Rh6BG185500 Rh7DG265300
rosa_wichuraiana Rw1G018240 Rw4G028270 Rw5G030690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 746
AccB7I CCANNNNNTGG 1 cut(s) 299
AccI GTMKAC 2 cut(s) 420, 1797
AccII CGCG 1 cut(s) 1478
AciI CCGC 5 cut(s) 59, 497, 557, 1129, 1987
AcoI YGGCCR 3 cut(s) 60, 406, 1645
AcsI RAATTY 2 cut(s) 13, 1564
AcuI CTGAAG 2 cut(s) 531, 1737
AcyI GRCGYC 1 cut(s) 1458
AdeI CACNNNGTG 2 cut(s) 551, 733
AfaI GTAC 2 cut(s) 270, 1092
AfiI CCNNNNNNNGG 7 cut(s) 31, 299, 578, 692, 786, 1330, 1583
AflIII ACRYGT 1 cut(s) 1047
AjnI CCWGG 5 cut(s) 464, 814, 1230, 1582, 1708
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 3 cut(s) 143, 1538, 1645
AoxI GGCC 8 cut(s) 60, 406, 426, 679, 1332, 1585, 1645, 1720
ApeKI GCWGC 5 cut(s) 139, 211, 506, 1611, 1697
ApoI RAATTY 2 cut(s) 13, 1564
AspLEI GCGC 1 cut(s) 211
AspS9I GGNCC 4 cut(s) 217, 679, 1586, 1920
AsuHPI GGTGA 5 cut(s) 537, 904, 1538, 1832, 1954
AsuII TTCGAA 1 cut(s) 1001
AvaII GGWCC 2 cut(s) 217, 1920
BalI TGGCCA 1 cut(s) 408
BamHI GGATCC 3 cut(s) 469, 607, 1341
BanI GGYRCC 1 cut(s) 746
BanII GRGCYC 2 cut(s) 243, 1668
BarI GAAGNNNNNNTAC 2 cut(s) 1083, 1115
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 5 cut(s) 151, 223, 493, 1623, 1684
BccI CCATC 3 cut(s) 570, 734, 1675
BceAI ACGGC 3 cut(s) 383, 666, 1632
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 5 cut(s) 466, 816, 1232, 1584, 1710
BclI TGATCA 1 cut(s) 330
BcoDI GTCTC 3 cut(s) 143, 1538, 1645
BfaI CTAG 7 cut(s) 84, 101, 185, 870, 1451, 1776, 1931
BfmI CTRYAG 3 cut(s) 562, 1467, 1609
BglI GCCNNNNNGGC 1 cut(s) 1694
BglII AGATCT 2 cut(s) 475, 1243
BisI GCNGC 8 cut(s) 60, 140, 212, 498, 507, 1129, 1612, 1698
BlsI GCNGC 8 cut(s) 61, 141, 213, 499, 508, 1130, 1613, 1699
Bme1390I CCNGG 5 cut(s) 466, 816, 1232, 1584, 1710
Bme18I GGWCC 2 cut(s) 217, 1920
BmgT120I GGNCC 4 cut(s) 217, 679, 1586, 1920
BmiI GGNNCC 5 cut(s) 471, 609, 748, 1343, 1441
BmrFI CCNGG 5 cut(s) 466, 816, 1232, 1584, 1710
BmsI GCATC 7 cut(s) 385, 879, 1129, 1217, 1602, 1675, 1907
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 596, 628
Bpu14I TTCGAA 1 cut(s) 1001
BpuEI CTTGAG 1 cut(s) 908
BsaBI GATNNNNATC 1 cut(s) 474
BsaHI GRCGYC 1 cut(s) 1458
BsaJI CCNNGG 6 cut(s) 134, 220, 465, 753, 1194, 1723
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 299, 578, 692, 786, 1330, 1583
Bse118I RCCGGY 3 cut(s) 363, 524, 1218
Bse1I ACTGG 3 cut(s) 968, 1621, 1768
Bse3DI GCAATG 1 cut(s) 1609
Bse8I GATNNNNATC 1 cut(s) 474
BseBI CCWGG 5 cut(s) 466, 816, 1232, 1584, 1710
BseDI CCNNGG 6 cut(s) 134, 220, 465, 753, 1194, 1723
BseGI GGATG 2 cut(s) 1232, 1690
BseJI GATNNNNATC 1 cut(s) 474
BseLI CCNNNNNNNGG 7 cut(s) 31, 299, 578, 692, 786, 1330, 1583
BseMI GCAATG 1 cut(s) 1609
BseNI ACTGG 3 cut(s) 968, 1621, 1768
BseRI GAGGAG 1 cut(s) 251
BseXI GCAGC 5 cut(s) 151, 223, 493, 1623, 1684
BseYI CCCAGC 2 cut(s) 54, 664
BsgI GTGCAG 1 cut(s) 868
Bsh1236I CGCG 1 cut(s) 1478
BshFI GGCC 8 cut(s) 62, 408, 428, 681, 1334, 1587, 1647, 1722
BshNI GGYRCC 1 cut(s) 746
BsiHKAI GWGCWC 1 cut(s) 243
BsiSI CCGG 5 cut(s) 364, 525, 645, 1219, 1353
BslFI GGGAC 2 cut(s) 48, 647
BslI CCNNNNNNNGG 7 cut(s) 31, 299, 578, 692, 786, 1330, 1583
BsmAI GTCTC 3 cut(s) 143, 1538, 1645
BsmBI CGTCTC 1 cut(s) 1538
BsmFI GGGAC 2 cut(s) 48, 647
BsmI GAATGC 1 cut(s) 528
BsnI GGCC 8 cut(s) 62, 408, 428, 681, 1334, 1587, 1647, 1722
Bsp119I TTCGAA 1 cut(s) 1001
Bsp1286I GDGCHC 2 cut(s) 243, 1668
Bsp19I CCATGG 1 cut(s) 1194
BspACI CCGC 5 cut(s) 59, 497, 557, 1129, 1987
BspANI GGCC 8 cut(s) 62, 408, 428, 681, 1334, 1587, 1647, 1722
BspFNI CGCG 1 cut(s) 1478
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 5 cut(s) 471, 609, 748, 1343, 1441
BspMAI CTGCAG 2 cut(s) 566, 1613
BspT104I TTCGAA 1 cut(s) 1001
BspT107I GGYRCC 1 cut(s) 746
BsrDI GCAATG 1 cut(s) 1609
BsrFI RCCGGY 3 cut(s) 363, 524, 1218
BsrI ACTGG 3 cut(s) 968, 1621, 1768
BssAI RCCGGY 3 cut(s) 363, 524, 1218
BssECI CCNNGG 6 cut(s) 134, 220, 465, 753, 1194, 1723
BssNI GRCGYC 1 cut(s) 1458
BssT1I CCWWGG 4 cut(s) 134, 753, 1194, 1723
Bst2UI CCWGG 5 cut(s) 466, 816, 1232, 1584, 1710
Bst4CI ACNGT 5 cut(s) 221, 798, 1090, 1435, 1471
Bst6I CTCTTC 1 cut(s) 1847
BstACI GRCGYC 1 cut(s) 1458
BstAPI GCANNNNNTGC 2 cut(s) 506, 1608
BstBI TTCGAA 1 cut(s) 1001
BstC8I GCNNGC 7 cut(s) 43, 365, 369, 715, 894, 1495, 1773
BstDEI CTNAG 1 cut(s) 1916
BstDSI CCRYGG 2 cut(s) 220, 1194
BstF5I GGATG 2 cut(s) 1232, 1690
BstFNI CGCG 1 cut(s) 1478
BstHHI GCGC 1 cut(s) 211
BstMAI GTCTC 3 cut(s) 143, 1538, 1645
BstNI CCWGG 5 cut(s) 466, 816, 1232, 1584, 1710
BstNSI RCATGY 2 cut(s) 814, 1051
BstSCI CCNGG 5 cut(s) 464, 814, 1230, 1582, 1708
BstSFI CTRYAG 3 cut(s) 562, 1467, 1609
BstUI CGCG 1 cut(s) 1478
BstV1I GCAGC 5 cut(s) 151, 223, 493, 1623, 1684
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 7 cut(s) 469, 475, 568, 607, 804, 1243, 1341
BstXI CCANNNNNNTGG 2 cut(s) 815, 1976
BstYI RGATCY 7 cut(s) 469, 475, 568, 607, 804, 1243, 1341
BsuRI GGCC 8 cut(s) 62, 408, 428, 681, 1334, 1587, 1647, 1722
BtgI CCRYGG 2 cut(s) 220, 1194
BtsCI GGATG 2 cut(s) 1232, 1690
BtsI GCAGTG 2 cut(s) 774, 1149
BtsIMutI CAGTG 5 cut(s) 774, 1149, 1431, 1628, 1761
Cac8I GCNNGC 7 cut(s) 43, 365, 369, 715, 894, 1495, 1773
CciI TCATGA 1 cut(s) 243
CfoI GCGC 1 cut(s) 211
Cfr10I RCCGGY 3 cut(s) 363, 524, 1218
Cfr13I GGNCC 4 cut(s) 217, 679, 1586, 1920
CseI GACGC 1 cut(s) 1447
Csp6I GTAC 2 cut(s) 269, 1091
CviQI GTAC 2 cut(s) 269, 1091
DdeI CTNAG 1 cut(s) 1916
DraI TTTAAA 2 cut(s) 1108, 1890
DraIII CACNNNGTG 2 cut(s) 551, 733
EaeI YGGCCR 3 cut(s) 60, 406, 1645
Eam1104I CTCTTC 1 cut(s) 1847
EarI CTCTTC 1 cut(s) 1847
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 4 cut(s) 134, 753, 1194, 1723
Eco24I GRGCYC 2 cut(s) 243, 1668
Eco32I GATATC 1 cut(s) 1379
Eco47I GGWCC 2 cut(s) 217, 1920
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 2 cut(s) 531, 1737
EcoICRI GAGCTC 1 cut(s) 241
EcoRII CCWGG 5 cut(s) 464, 814, 1230, 1582, 1708
EcoRV GATATC 1 cut(s) 1379
EcoT14I CCWWGG 4 cut(s) 134, 753, 1194, 1723
EcoT22I ATGCAT 1 cut(s) 541
EcoT38I GRGCYC 2 cut(s) 243, 1668
ErhI CCWWGG 4 cut(s) 134, 753, 1194, 1723
Esp3I CGTCTC 1 cut(s) 1538
FalI AAGNNNNNCTT 2 cut(s) 917, 949
FaqI GGGAC 2 cut(s) 48, 647
FauNDI CATATG 1 cut(s) 1878
FbaI TGATCA 1 cut(s) 330
FblI GTMKAC 2 cut(s) 420, 1797
Fnu4HI GCNGC 8 cut(s) 60, 140, 212, 498, 507, 1129, 1612, 1698
FokI GGATG 2 cut(s) 1239, 1697
FriOI GRGCYC 2 cut(s) 243, 1668
Fsp4HI GCNGC 8 cut(s) 60, 140, 212, 498, 507, 1129, 1612, 1698
FspBI CTAG 7 cut(s) 84, 101, 185, 870, 1451, 1776, 1931
GlaI GCGC 1 cut(s) 210
GluI GCNGC 8 cut(s) 60, 140, 212, 498, 507, 1129, 1612, 1698
GsaI CCCAGC 2 cut(s) 58, 668
HaeIII GGCC 8 cut(s) 62, 408, 428, 681, 1334, 1587, 1647, 1722
HapII CCGG 5 cut(s) 364, 525, 645, 1219, 1353
HgaI GACGC 1 cut(s) 1447
HhaI GCGC 1 cut(s) 211
Hin1I GRCGYC 1 cut(s) 1458
Hin6I GCGC 1 cut(s) 209
HinP1I GCGC 1 cut(s) 209
HincII GTYRAC 1 cut(s) 1216
HindII GTYRAC 1 cut(s) 1216
HindIII AAGCTT 1 cut(s) 1769
HinfI GANTC 7 cut(s) 151, 759, 827, 882, 1447, 1758, 1860
HpaII CCGG 5 cut(s) 364, 525, 645, 1219, 1353
HphI GGTGA 5 cut(s) 537, 904, 1538, 1832, 1954
Hpy166II GTNNAC 6 cut(s) 269, 421, 1216, 1474, 1529, 1798
Hpy188I TCNGA 3 cut(s) 789, 961, 1123
Hpy8I GTNNAC 6 cut(s) 269, 421, 1216, 1474, 1529, 1798
HpyAV CCTTC 8 cut(s) 187, 241, 670, 700, 1072, 1109, 1219, 1712
HpyCH4III ACNGT 5 cut(s) 221, 798, 1090, 1435, 1471
HpyCH4IV ACGT 1 cut(s) 690
HpyF3I CTNAG 1 cut(s) 1916
HpySE526I ACGT 1 cut(s) 690
Hsp92I GRCGYC 1 cut(s) 1458
HspAI GCGC 1 cut(s) 209
KroI GCCGGC 1 cut(s) 363
KroNI GCCGGC 1 cut(s) 365
Ksp22I TGATCA 1 cut(s) 330
LmnI GCTCC 2 cut(s) 238, 1809
Lsp1109I GCAGC 5 cut(s) 151, 223, 493, 1623, 1684
LweI GCATC 7 cut(s) 385, 879, 1129, 1217, 1602, 1675, 1907
MaeI CTAG 7 cut(s) 84, 101, 185, 870, 1451, 1776, 1931
MaeII ACGT 1 cut(s) 690
MaeIII GTNAC 8 cut(s) 229, 351, 460, 818, 910, 1030, 1269, 1820
MboII GAAGA 7 cut(s) 9, 116, 329, 814, 1297, 1664, 1834
MfeI CAATTG 1 cut(s) 144
MflI RGATCY 7 cut(s) 469, 475, 568, 607, 804, 1243, 1341
MhlI GDGCHC 2 cut(s) 243, 1668
MlsI TGGCCA 1 cut(s) 408
MluNI TGGCCA 1 cut(s) 408
MlyI GAGTC 3 cut(s) 145, 821, 891
MmeI TCCRAC 6 cut(s) 280, 430, 984, 1146, 1373, 1417
Mox20I TGGCCA 1 cut(s) 408
Mph1103I ATGCAT 1 cut(s) 541
MroNI GCCGGC 1 cut(s) 363
MscI TGGCCA 1 cut(s) 408
MseI TTAA 5 cut(s) 483, 516, 1107, 1164, 1889
MslI CAYNNNNRTG 2 cut(s) 326, 414
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 3 cut(s) 214, 668, 1037
MspI CCGG 5 cut(s) 364, 525, 645, 1219, 1353
MspR9I CCNGG 5 cut(s) 466, 816, 1232, 1584, 1710
MunI CAATTG 1 cut(s) 144
Mva1269I GAATGC 1 cut(s) 528
MvaI CCWGG 5 cut(s) 466, 816, 1232, 1584, 1710
MvnI CGCG 1 cut(s) 1478
NaeI GCCGGC 1 cut(s) 365
NcoI CCATGG 1 cut(s) 1194
NdeI CATATG 1 cut(s) 1878
NgoMIV GCCGGC 1 cut(s) 363
NlaIV GGNNCC 5 cut(s) 471, 609, 748, 1343, 1441
NmuCI GTSAC 5 cut(s) 229, 351, 910, 1269, 1820
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 2 cut(s) 814, 1051
NspV TTCGAA 1 cut(s) 1001
PagI TCATGA 1 cut(s) 243
PciI ACATGT 1 cut(s) 1047
PctI GAATGC 1 cut(s) 528
PdiI GCCGGC 1 cut(s) 365
PfeI GAWTC 4 cut(s) 759, 1447, 1758, 1860
PflFI GACNNNGTC 1 cut(s) 908
PflMI CCANNNNNTGG 1 cut(s) 299
PkrI GCNGC 8 cut(s) 61, 141, 213, 499, 508, 1130, 1613, 1699
PleI GAGTC 3 cut(s) 145, 821, 890
PpsI GAGTC 3 cut(s) 145, 821, 890
PscI ACATGT 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 5 cut(s) 464, 814, 1230, 1582, 1708
PspFI CCCAGC 2 cut(s) 54, 664
PspGI CCWGG 5 cut(s) 464, 814, 1230, 1582, 1708
PspN4I GGNNCC 5 cut(s) 471, 609, 748, 1343, 1441
PspPI GGNCC 4 cut(s) 217, 679, 1586, 1920
PstI CTGCAG 2 cut(s) 566, 1613
PsuI RGATCY 7 cut(s) 469, 475, 568, 607, 804, 1243, 1341
PsyI GACNNNGTC 1 cut(s) 908
PvuII CAGCTG 3 cut(s) 214, 668, 1037
RsaI GTAC 2 cut(s) 270, 1092
RsaNI GTAC 2 cut(s) 269, 1091
RseI CAYNNNNRTG 2 cut(s) 326, 414
SacI GAGCTC 1 cut(s) 243
SaqAI TTAA 5 cut(s) 483, 516, 1107, 1164, 1889
SatI GCNGC 8 cut(s) 60, 140, 212, 498, 507, 1129, 1612, 1698
Sau96I GGNCC 4 cut(s) 217, 679, 1586, 1920
SchI GAGTC 3 cut(s) 145, 821, 891
ScrFI CCNGG 5 cut(s) 466, 816, 1232, 1584, 1710
SduI GDGCHC 2 cut(s) 243, 1668
SfaNI GCATC 7 cut(s) 385, 879, 1129, 1217, 1602, 1675, 1907
SfcI CTRYAG 3 cut(s) 562, 1467, 1609
SfuI TTCGAA 1 cut(s) 1001
SinI GGWCC 2 cut(s) 217, 1920
SmiMI CAYNNNNRTG 2 cut(s) 326, 414
SmlI CTYRAG 1 cut(s) 923
SmoI CTYRAG 1 cut(s) 923
SsiI CCGC 5 cut(s) 59, 497, 557, 1129, 1987
SspMI CTAG 7 cut(s) 84, 101, 185, 870, 1451, 1776, 1931
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 5 cut(s) 464, 814, 1230, 1582, 1708
StyI CCWWGG 4 cut(s) 134, 753, 1194, 1723
TaaI ACNGT 5 cut(s) 221, 798, 1090, 1435, 1471
TaiI ACGT 1 cut(s) 693
TaqI TCGA 7 cut(s) 154, 175, 324, 1001, 1095, 1185, 1240
TatI WGTACW 2 cut(s) 268, 1090
TauI GCSGC 3 cut(s) 62, 500, 1131
TfiI GAWTC 4 cut(s) 759, 1447, 1758, 1860
Tru1I TTAA 5 cut(s) 483, 516, 1107, 1164, 1889
Tru9I TTAA 5 cut(s) 483, 516, 1107, 1164, 1889
TscAI CASTG 5 cut(s) 781, 1149, 1438, 1628, 1768
TseFI GTSAC 5 cut(s) 229, 351, 910, 1269, 1820
TseI GCWGC 5 cut(s) 139, 211, 506, 1611, 1697
Tsp45I GTSAC 5 cut(s) 229, 351, 910, 1269, 1820
TspGWI ACGGA 3 cut(s) 248, 981, 1305
TspRI CASTG 5 cut(s) 781, 1149, 1438, 1628, 1768
Tth111I GACNNNGTC 1 cut(s) 908
Van91I CCANNNNNTGG 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 217, 1920
XapI RAATTY 2 cut(s) 13, 1564
XbaI TCTAGA 1 cut(s) 83
XceI RCATGY 2 cut(s) 814, 1051
XmiI GTMKAC 2 cut(s) 420, 1797
XspI CTAG 7 cut(s) 84, 101, 185, 870, 1451, 1776, 1931
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.