Rroxscaffold_4G00289090

Lysosomal beta glucosidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000625
Physical Location & Seq
Reverse (-)
9709948 .. 9720136
10189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00289090.1

Sequence Viewer

Length: 1182 bp
ATGTCTTTTAAATCGCTTAAGATTTCACCCGATGATGCCTGTCACCTTTACGAGGGGGCTTCTTCTGTTGTGCTTGTGTATAGCAGCGGTGACGATGAGAACAGCAGAAGCAGCAAGTGGAGGAGGATACATAAGGACCCGAAACAGCCCTTGAATACTAGAATCAATGACCTACTGAGCCGGATGACTTTGGAGGAAAAGATTGGCCAGATGACACAGATACAGCGCAGTGTTGCTTCAGCTGAGGTCATGAACAAGTACTACATTGGGAGTGTCTTGAGTGGCGGTGGGAGTGTGCCATCAGAAGAAGCTTCTGCAGAAACTTGGGTTACAATGGTGAATGATTTTCAAAAGGGTTCTCTATCAACTCACCTCGGTATTCCAATGATTTATGGTATTGATGCTGTTCATGGCCACAATAATGTCTACAAGGCAACAATCTTTCCCCACAATGTTGGCCTCGGAGTTACCAGGCAAATCATACCTGGATTACAAGGAGATATACCACCTAACTCTACAAAGGGAACACCCTTTGTAGCTGGAAAATTTCCTCTACTTGGTGAGTTTACATGCCAGAATGCTATTATGGCTGAGCGCTTTATTGAAGCAGGTAGCGCCGTGTCTTTGTATCGTAGTGAGGCAAGAGGTCGTCTTGACCACGCTAGAGCAGAAGCGTGTTACGAGGGTTTAGGGCACGTTCCCCAAGGAAAGAGGGTTTCTATCGCCCGTGTAGGCTTTCGATATACGAGAAGTTTGAGCCGGGGAGGCGTCCGGCGAGGCGAGGCCGCTAGCAAGAGCGATGCTCCATATGACGAAATTGACACCGATGTCATTATCGGGGAGTTGTTGCGGGAGTCGGAGACGGCAAGGCGATGTGACGTCGAGCTTTCCAACAAGGATGTGCGTGTGACCGATCATCGGGTGAACATCCAGCTGCCCAATGAAGTATACTTGAGTTTTCCCGATAGCGTGTTGGCGTACCTAAACCAACAAGCCGAGGAGGAGGTGGGTGCCGAGGGGCATGTGGCTCGGGGCCACCAAGGGCCGAGTGTCGAGGAGGTAGCACCTTCTCGAGAGGGGGTGGATGAGGCAGGTCAACTTTCCCAAGTATTCGCCGTGGAGCGCCGGTCCCCAGATTCCGAAGGCGCAAGGCGGTCCCCCGAGTCTCGGCGGGAGGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

393

Amino Acids

43.04

Weight (kDa)

5.94

Isoelectric Point (pI)

53.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 63 - 159 8.1e-12 Glycosyl hydrolase family 3 N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000625)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47010 AT3G47040 AT3G47050
fragaria_vesca FvH4_1g28352 FvH4_3g26960 FvH4_7g05180
malus_domestica MD02G1089300.v1.1 MD02G1259900.v1.1 MD14G1004400.v1.1
prunus_persica Prupe.2G065700_v2.0.a1 Prupe.2G092700_v2.0.a1 Prupe.7G007100_v2.0.a1 Prupe.7G007700_v2.0.a1
pyrus_communis pycom02g22100 pycom07g04670 pycom11g06820 pycom11g15190 pycom14g00200 pycom14g00230
rosa_chinensis RchiOBHm_Chr5g0049431 RchiOBHm_Chr5g0049441 RchiOBHm_Chr5g0079371 RchiOBHm_Chr6g0274311
rosa_laevigata RLG00000006403 RLG00000008403 RLG00000028847 RLG00000034618
rosa_multiflora Rmu_co8385859.1_g000001 Rmu_sc0000376.1_g000001 Rmu_sc0001307.1_g000017 Rmu_sc0001307.1_g000019 Rmu_sc0001900.1_g000031 Rmu_sc0002912.1_g000028 Rmu_sc0006084.1_g000018 Rmu_sc0006888.1_g000063 Rmu_sc0014052.1_g000002 Rmu_sc0014052.1_g000004 Rmu_sc0022931.1_g000004
rosa_roxburghii Rroxscaffold_1G00003570 Rroxscaffold_1G00032240 Rroxscaffold_1G00032250 Rroxscaffold_2G00103090 Rroxscaffold_4G00289090 Rroxscaffold_5G00336970
rosa_rugosa Rorug03G0185900 Rorug04G0020500 Rorug04G0020600 Rorug04G0020600 Rorug04G0020700.1 Rorug04G0020800.1 Rorug04G0020900 Rorug04G0020900 Rorug04G0020900 Rorug05G0248500 Rorug05G0248500 Rorug05G0248500 Rorug05G0248600 Rorug05G0465800
rosa_samantha Rh3CG363400 Rh4DG330500 Rh4DG330600 Rh5AG245600 Rh5AG516800 Rh5AG517600 Rh5AG519000 Rh5AG519500 Rh5BG335900 Rh5BG336000 Rh5BG540700 Rh5BG542700 Rh5DG348200 Rh5DG348300 Rh5DG551900 Rh6BG185500 Rh7DG265300
rosa_wichuraiana Rw1G018240 Rw4G028270 Rw5G030690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 827
AatII GACGTC 1 cut(s) 882
Acc36I ACCTGC 2 cut(s) 599, 1082
AccB1I GGYRCC 1 cut(s) 1010
AccI GTMKAC 2 cut(s) 426, 948
AciI CCGC 6 cut(s) 87, 285, 786, 850, 1153, 1171
AcoI YGGCCR 2 cut(s) 205, 412
AcsI RAATTY 1 cut(s) 545
AcuI CTGAAG 1 cut(s) 222
AcyI GRCGYC 2 cut(s) 768, 879
AfaI GTAC 2 cut(s) 260, 980
AfeI AGCGCT 1 cut(s) 596
AfiI CCNNNNNNNGG 4 cut(s) 52, 557, 918, 1167
AflII CTTAAG 1 cut(s) 17
AgsI TTSAA 3 cut(s) 154, 350, 605
AjnI CCWGG 2 cut(s) 470, 484
AluBI AGCT 5 cut(s) 242, 311, 539, 886, 934
AluI AGCT 5 cut(s) 242, 311, 539, 886, 934
Alw26I GTCTC 2 cut(s) 854, 1170
Ama87I CYCGRG 3 cut(s) 1029, 1071, 1160
Aor51HI AGCGCT 1 cut(s) 596
AoxI GGCC 6 cut(s) 205, 412, 457, 783, 1033, 1043
ApeKI GCWGC 3 cut(s) 84, 111, 934
ApoI RAATTY 1 cut(s) 545
AspLEI GCGC 5 cut(s) 228, 597, 617, 1125, 1148
AspS9I GGNCC 5 cut(s) 136, 1033, 1043, 1128, 1155
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 7 cut(s) 18, 35, 101, 349, 362, 572, 934
AsuNHI GCTAGC 1 cut(s) 788
AvaI CYCGRG 3 cut(s) 1029, 1071, 1160
AvaII GGWCC 3 cut(s) 136, 1128, 1155
BaeGI GKGCMC 1 cut(s) 696
BalI TGGCCA 2 cut(s) 207, 414
BanI GGYRCC 1 cut(s) 1010
BbvCI CCTCAGC 1 cut(s) 243
BbvI GCAGC 3 cut(s) 96, 123, 921
BccI CCATC 1 cut(s) 307
BceAI ACGGC 3 cut(s) 602, 879, 1100
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BciT130I CCWGG 2 cut(s) 472, 486
BciVI GTATCC 1 cut(s) 120
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 2 cut(s) 854, 1170
BfaI CTAG 3 cut(s) 159, 663, 789
BfmI CTRYAG 1 cut(s) 315
BfoI RGCGCY 3 cut(s) 598, 618, 1126
BfrI CTTAAG 1 cut(s) 17
BfuAI ACCTGC 2 cut(s) 599, 1082
BfuI GTATCC 1 cut(s) 120
BglI GCCNNNNNGGC 1 cut(s) 765
BisI GCNGC 4 cut(s) 85, 112, 786, 935
BlpI GCTNAGC 1 cut(s) 591
BlsI GCNGC 4 cut(s) 86, 113, 787, 936
BmcAI AGTACT 1 cut(s) 260
Bme1390I CCNGG 3 cut(s) 472, 486, 761
Bme18I GGWCC 3 cut(s) 136, 1128, 1155
BmeT110I CYCGRG 3 cut(s) 1029, 1071, 1160
BmgT120I GGNCC 5 cut(s) 136, 1033, 1043, 1128, 1155
BmiI GGNNCC 5 cut(s) 138, 1012, 1034, 1130, 1157
BmrFI CCNGG 3 cut(s) 472, 486, 761
BmsI GCATC 3 cut(s) 25, 391, 790
BmtI GCTAGC 1 cut(s) 792
BplI GAGNNNNNCTC 2 cut(s) 787, 819
Bpu10I CCTNAGC 1 cut(s) 243
Bpu1102I GCTNAGC 1 cut(s) 591
BpuEI CTTGAG 2 cut(s) 298, 973
BpuMI CCSGG 1 cut(s) 761
BsaHI GRCGYC 2 cut(s) 768, 879
BsaJI CCNNGG 8 cut(s) 373, 460, 703, 760, 996, 1014, 1039, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 1112, 1142
Bsc4I CCNNNNNNNGG 4 cut(s) 52, 557, 918, 1167
Bse118I RCCGGY 1 cut(s) 1125
BseBI CCWGG 2 cut(s) 472, 486
BseDI CCNNGG 8 cut(s) 373, 460, 703, 760, 996, 1014, 1039, 1116
BseGI GGATG 4 cut(s) 189, 904, 927, 1090
BseLI CCNNNNNNNGG 4 cut(s) 52, 557, 918, 1167
BseMII CTCAG 3 cut(s) 167, 234, 582
BseRI GAGGAG 4 cut(s) 136, 1013, 1016, 1070
BseSI GKGCMC 1 cut(s) 696
BseXI GCAGC 3 cut(s) 96, 123, 921
BshFI GGCC 6 cut(s) 207, 414, 459, 785, 1035, 1045
BshNI GGYRCC 1 cut(s) 1010
BsiHKCI CYCGRG 3 cut(s) 1029, 1071, 1160
BsiSI CCGG 4 cut(s) 181, 760, 772, 1126
BslFI GGGAC 2 cut(s) 1114, 1141
BslI CCNNNNNNNGG 4 cut(s) 52, 557, 918, 1167
BsmAI GTCTC 2 cut(s) 854, 1170
BsmBI CGTCTC 1 cut(s) 854
BsmFI GGGAC 2 cut(s) 1114, 1141
BsmI GAATGC 1 cut(s) 583
BsnI GGCC 6 cut(s) 207, 414, 459, 785, 1035, 1045
BsoBI CYCGRG 3 cut(s) 1029, 1071, 1160
Bsp1286I GDGCHC 1 cut(s) 696
Bsp143I GATC 1 cut(s) 913
Bsp1720I GCTNAGC 1 cut(s) 591
BspACI CCGC 6 cut(s) 87, 285, 786, 850, 1153, 1171
BspANI GGCC 6 cut(s) 207, 414, 459, 785, 1035, 1045
BspCNI CTCAG 3 cut(s) 168, 235, 583
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 5 cut(s) 138, 1012, 1034, 1130, 1157
BspMAI CTGCAG 1 cut(s) 319
BspMI ACCTGC 2 cut(s) 599, 1082
BspOI GCTAGC 1 cut(s) 792
BspT107I GGYRCC 1 cut(s) 1010
BspTI CTTAAG 1 cut(s) 17
BsrFI RCCGGY 1 cut(s) 1125
BssAI RCCGGY 1 cut(s) 1125
BssECI CCNNGG 8 cut(s) 373, 460, 703, 760, 996, 1014, 1039, 1116
BssMI GATC 1 cut(s) 913
BssNAI GTATAC 1 cut(s) 949
BssNI GRCGYC 2 cut(s) 768, 879
BssT1I CCWWGG 2 cut(s) 703, 1039
Bst1107I GTATAC 1 cut(s) 949
Bst2UI CCWGG 2 cut(s) 472, 486
BstACI GRCGYC 2 cut(s) 768, 879
BstAFI CTTAAG 1 cut(s) 17
BstC8I GCNNGC 1 cut(s) 790
BstDEI CTNAG 3 cut(s) 176, 243, 591
BstDSI CCRYGG 1 cut(s) 1116
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 4 cut(s) 189, 904, 927, 1090
BstH2I RGCGCY 3 cut(s) 598, 618, 1126
BstHHI GCGC 5 cut(s) 228, 597, 617, 1125, 1148
BstKTI GATC 1 cut(s) 916
BstMAI GTCTC 2 cut(s) 854, 1170
BstMBI GATC 1 cut(s) 913
BstMWI GCNNNNNNNGC 4 cut(s) 111, 587, 614, 765
BstNI CCWGG 2 cut(s) 472, 486
BstNSI RCATGY 2 cut(s) 573, 1025
BstSCI CCNGG 3 cut(s) 470, 484, 759
BstSFI CTRYAG 1 cut(s) 315
BstSLI GKGCMC 1 cut(s) 696
BstV1I GCAGC 3 cut(s) 96, 123, 921
BstXI CCANNNNNNTGG 1 cut(s) 455
BstZ17I GTATAC 1 cut(s) 949
BsuI GTATCC 1 cut(s) 120
BsuRI GGCC 6 cut(s) 207, 414, 459, 785, 1035, 1045
BtgI CCRYGG 1 cut(s) 1116
BtgZI GCGATG 2 cut(s) 813, 886
BtsCI GGATG 4 cut(s) 189, 904, 927, 1090
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
BveI ACCTGC 2 cut(s) 599, 1082
Cac8I GCNNGC 1 cut(s) 790
CciI TCATGA 1 cut(s) 249
CfoI GCGC 5 cut(s) 228, 597, 617, 1125, 1148
Cfr10I RCCGGY 1 cut(s) 1125
Cfr13I GGNCC 5 cut(s) 136, 1033, 1043, 1128, 1155
CseI GACGC 1 cut(s) 757
Csp6I GTAC 2 cut(s) 259, 979
CviAII CATG 4 cut(s) 250, 410, 570, 1022
CviQI GTAC 2 cut(s) 259, 979
DdeI CTNAG 3 cut(s) 176, 243, 591
DpnI GATC 1 cut(s) 915
DpnII GATC 1 cut(s) 913
DraI TTTAAA 1 cut(s) 10
DrdI GACNNNNNNGTC 1 cut(s) 827
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 2 cut(s) 205, 412
Eco130I CCWWGG 2 cut(s) 703, 1039
Eco47I GGWCC 3 cut(s) 136, 1128, 1155
Eco47III AGCGCT 1 cut(s) 596
Eco57I CTGAAG 1 cut(s) 222
Eco88I CYCGRG 3 cut(s) 1029, 1071, 1160
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 136
EcoRII CCWGG 2 cut(s) 470, 484
EcoT14I CCWWGG 2 cut(s) 703, 1039
ErhI CCWWGG 2 cut(s) 703, 1039
Esp3I CGTCTC 1 cut(s) 854
FaeI CATG 4 cut(s) 253, 413, 573, 1025
FaqI GGGAC 2 cut(s) 1114, 1141
FatI CATG 4 cut(s) 249, 409, 569, 1021
FauI CCCGC 2 cut(s) 843, 1164
FauNDI CATATG 1 cut(s) 808
FblI GTMKAC 2 cut(s) 426, 948
Fnu4HI GCNGC 4 cut(s) 85, 112, 786, 935
FokI GGATG 4 cut(s) 196, 911, 914, 1097
Fsp4HI GCNGC 4 cut(s) 85, 112, 786, 935
FspBI CTAG 3 cut(s) 159, 663, 789
GlaI GCGC 5 cut(s) 227, 596, 616, 1124, 1147
GluI GCNGC 4 cut(s) 85, 112, 786, 935
HaeII RGCGCY 3 cut(s) 598, 618, 1126
HaeIII GGCC 6 cut(s) 207, 414, 459, 785, 1035, 1045
HapII CCGG 4 cut(s) 181, 760, 772, 1126
HgaI GACGC 1 cut(s) 757
HhaI GCGC 5 cut(s) 228, 597, 617, 1125, 1148
Hin1I GRCGYC 2 cut(s) 768, 879
Hin1II CATG 4 cut(s) 253, 413, 573, 1025
Hin6I GCGC 5 cut(s) 226, 595, 615, 1123, 1146
HinP1I GCGC 5 cut(s) 226, 595, 615, 1123, 1146
HincII GTYRAC 1 cut(s) 1097
HindII GTYRAC 1 cut(s) 1097
HindIII AAGCTT 1 cut(s) 309
HinfI GANTC 4 cut(s) 162, 854, 1136, 1163
HpaII CCGG 4 cut(s) 181, 760, 772, 1126
HphI GGTGA 7 cut(s) 18, 35, 101, 349, 362, 572, 934
Hpy166II GTNNAC 5 cut(s) 427, 567, 925, 949, 1097
Hpy188I TCNGA 4 cut(s) 304, 464, 859, 1141
Hpy188III TCNNGA 6 cut(s) 250, 277, 653, 962, 1071, 1073
Hpy8I GTNNAC 5 cut(s) 427, 567, 925, 949, 1097
Hpy99I CGWCG 1 cut(s) 884
HpyAV CCTTC 2 cut(s) 1077, 1136
HpyCH4IV ACGT 2 cut(s) 696, 879
HpyCH4V TGCA 1 cut(s) 317
HpyF10VI GCNNNNNNNGC 4 cut(s) 111, 587, 614, 765
HpyF3I CTNAG 3 cut(s) 176, 243, 591
HpySE526I ACGT 2 cut(s) 696, 879
Hsp92I GRCGYC 2 cut(s) 768, 879
Hsp92II CATG 4 cut(s) 253, 413, 573, 1025
HspAI GCGC 5 cut(s) 226, 595, 615, 1123, 1146
Kzo9I GATC 1 cut(s) 913
LmnI GCTCC 2 cut(s) 808, 1120
Lsp1109I GCAGC 3 cut(s) 96, 123, 921
LweI GCATC 3 cut(s) 25, 391, 790
MaeI CTAG 3 cut(s) 159, 663, 789
MaeII ACGT 2 cut(s) 696, 879
MaeIII GTNAC 7 cut(s) 41, 89, 328, 466, 677, 875, 907
MalI GATC 1 cut(s) 915
MboI GATC 1 cut(s) 913
MboII GAAGA 2 cut(s) 54, 317
MhlI GDGCHC 1 cut(s) 696
MlsI TGGCCA 2 cut(s) 207, 414
MluCI AATT 2 cut(s) 545, 816
MluNI TGGCCA 2 cut(s) 207, 414
MlyI GAGTC 2 cut(s) 863, 1172
MmeI TCCRAC 2 cut(s) 837, 915
Mox20I TGGCCA 2 cut(s) 207, 414
MscI TGGCCA 2 cut(s) 207, 414
MseI TTAA 2 cut(s) 9, 18
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 2 cut(s) 207, 414
MspA1I CMGCKG 3 cut(s) 87, 242, 934
MspCI CTTAAG 1 cut(s) 17
MspI CCGG 4 cut(s) 181, 760, 772, 1126
MspR9I CCNGG 3 cut(s) 472, 486, 761
Mva1269I GAATGC 1 cut(s) 583
MvaI CCWGG 2 cut(s) 472, 486
MwoI GCNNNNNNNGC 4 cut(s) 111, 587, 614, 765
NciI CCSGG 1 cut(s) 761
NdeI CATATG 1 cut(s) 808
NdeII GATC 1 cut(s) 913
NheI GCTAGC 1 cut(s) 788
NlaIII CATG 4 cut(s) 253, 413, 573, 1025
NlaIV GGNNCC 5 cut(s) 138, 1012, 1034, 1130, 1157
NmeAIII GCCGAG 4 cut(s) 1021, 1039, 1071, 1147
NmuCI GTSAC 4 cut(s) 41, 89, 875, 907
NspI RCATGY 2 cut(s) 573, 1025
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 1 cut(s) 249
PctI GAATGC 1 cut(s) 583
PfeI GAWTC 2 cut(s) 162, 1136
PkrI GCNGC 4 cut(s) 86, 113, 787, 936
PleI GAGTC 2 cut(s) 862, 1171
PpsI GAGTC 2 cut(s) 862, 1171
PpuMI RGGWCCY 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 2 cut(s) 470, 484
PspGI CCWGG 2 cut(s) 470, 484
PspN4I GGNNCC 5 cut(s) 138, 1012, 1034, 1130, 1157
PspPI GGNCC 5 cut(s) 136, 1033, 1043, 1128, 1155
PspPPI RGGWCCY 1 cut(s) 136
PsrI GAACNNNNNNTAC 2 cut(s) 245, 277
PstI CTGCAG 1 cut(s) 319
PvuII CAGCTG 2 cut(s) 242, 934
RsaI GTAC 2 cut(s) 260, 980
RsaNI GTAC 2 cut(s) 259, 979
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 2 cut(s) 9, 18
SatI GCNGC 4 cut(s) 85, 112, 786, 935
Sau3AI GATC 1 cut(s) 913
Sau96I GGNCC 5 cut(s) 136, 1033, 1043, 1128, 1155
ScaI AGTACT 1 cut(s) 260
SchI GAGTC 2 cut(s) 863, 1172
ScrFI CCNGG 3 cut(s) 472, 486, 761
SduI GDGCHC 1 cut(s) 696
SfaNI GCATC 3 cut(s) 25, 391, 790
SfcI CTRYAG 1 cut(s) 315
Sfr274I CTCGAG 1 cut(s) 1071
SinI GGWCC 3 cut(s) 136, 1128, 1155
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 4 cut(s) 17, 277, 952, 1071
SmoI CTYRAG 4 cut(s) 17, 277, 952, 1071
Sse9I AATT 2 cut(s) 545, 816
SsiI CCGC 6 cut(s) 87, 285, 786, 850, 1153, 1171
SspMI CTAG 3 cut(s) 159, 663, 789
StyD4I CCNGG 3 cut(s) 470, 484, 759
StyI CCWWGG 2 cut(s) 703, 1039
TaiI ACGT 2 cut(s) 699, 882
TaqI TCGA 4 cut(s) 739, 882, 1053, 1072
TaqII GACCGA 1 cut(s) 926
TasI AATT 2 cut(s) 545, 816
TatI WGTACW 1 cut(s) 258
TauI GCSGC 1 cut(s) 788
TfiI GAWTC 2 cut(s) 162, 1136
Tru1I TTAA 2 cut(s) 9, 18
Tru9I TTAA 2 cut(s) 9, 18
TscAI CASTG 1 cut(s) 235
TseFI GTSAC 4 cut(s) 41, 89, 875, 907
TseI GCWGC 3 cut(s) 84, 111, 934
Tsp45I GTSAC 4 cut(s) 41, 89, 875, 907
TspDTI ATGAA 3 cut(s) 266, 398, 957
TspRI CASTG 1 cut(s) 235
Vha464I CTTAAG 1 cut(s) 17
VpaK11BI GGWCC 3 cut(s) 136, 1128, 1155
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 1 cut(s) 545
XceI RCATGY 2 cut(s) 573, 1025
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 2 cut(s) 426, 948
XspI CTAG 3 cut(s) 159, 663, 789
ZraI GACGTC 1 cut(s) 880
ZrmI AGTACT 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.