Rmu_sc0014052.1_g000002

xylan 1,4-beta-xylosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014052.1
OG0000625
Physical Location & Seq
Forward (+)
4098 .. 7194
3097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014052.1_g000002.1.cds

Sequence Viewer

Length: 1743 bp
atgacagaagcaagattatctagacagcacaggaaactagaagataatgaatacatggcgtacaaagacccttggcagccaattgagactcgaataaatgaccttatggatcgaatgacactagacgagaaggttgctcaaatggcgcagctggaccgtggtagtgtcacggaggagctcatgaaggaacacaacataggaagtgtactgaatgggggagagagtttgccaagagttggacttactgcgtatgaagacatcgacatgatcaacaagtttcaaaattgggatccagatcttattaagaggataggtgcggcaactgctgctgaagttaaagctaccggcattcaatatgcattttcaccatgtgttgcggtctgcagagatccaagatggggtaggtgttatgaaagttttagcgaggatccctccattgtaagacaaatgactgaaataatagccggattgcaaggcgaagtcccagctggacagaagggccgtccttacgttggtggaaaggagaaggtagctggctgtgcaaagcactatgtgggagatggtggcaccaccaagggaatcaatgagaacaacactgccattgatcggaatgaactgttgaagatccacatgcctggttacttggactctattgacaagggcgtgtgcagtatcatggtttcatactctagcttgaatggagtcaagatgcacgctaaccatgaccttgtcaccaactatctcaaggacaccttgaagttcaagggttttgtcatctccgactggcagggtcttgacaaaattacctatccgttccattcgaattacacatactcggttcttgctggtgtttcagctggtcttgacatgttcatacttcccttcaactatacagagttccatgatactgtactcgaccttcactttaaaaacctaatatccgacagccgcattgatgatgcagtgtataggatactgaggattaagttcataatgggtctgttcgacaaccccatggctgattataccttcgttgaccggcttggatgccaggctcatcgagatctggctagggaggcagtaaggaagtcacttgttcttttgaagaacggaaaaaaaccaaacacaccattcctgcctctccctaaaaaggccaataggatccttgttgccggaactcatgcaaacaatttgggatatcaatgtggtggttggagtatcacttggcaaggagtaagtggcaataacaacactgttggaaccacgattctaggtggcgtcatagctacagtttacgcgacaacagaagttgtgcacagtttaaatccagatcctaattttatccaggcaagcaacattgactatgccattgttgctgttggtgaacccccttacgcagagacgaaaggggataatttgaatttgaccattccagaaccaggcccaagcatcattagcaatgtctgcagcgtagtccagtgtgttgttattgttgtctctggccgtcctcttgtgattgagccctatcttccaatgatggatgcccttgtggctgcatggctacctggaactgaaggccaaggagttgctgatgttcttttcggggattatggattcactggaaagcttgctaggacttggttcaagagagtagaccagctccctatgaatgttggtgacaaaaattatgatcccctcttcccctttggttttggaatcacaactgaaccacatatgaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

580

Amino Acids

64.22

Weight (kDa)

5.85

Isoelectric Point (pI)

26.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000625)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47010 AT3G47040 AT3G47050
fragaria_vesca FvH4_1g28352 FvH4_3g26960 FvH4_7g05180
malus_domestica MD02G1089300.v1.1 MD02G1259900.v1.1 MD14G1004400.v1.1
prunus_persica Prupe.2G065700_v2.0.a1 Prupe.2G092700_v2.0.a1 Prupe.7G007100_v2.0.a1 Prupe.7G007700_v2.0.a1
pyrus_communis pycom02g22100 pycom07g04670 pycom11g06820 pycom11g15190 pycom14g00200 pycom14g00230
rosa_chinensis RchiOBHm_Chr5g0049431 RchiOBHm_Chr5g0049441 RchiOBHm_Chr5g0079371 RchiOBHm_Chr6g0274311
rosa_laevigata RLG00000006403 RLG00000008403 RLG00000028847 RLG00000034618
rosa_multiflora Rmu_co8385859.1_g000001 Rmu_sc0000376.1_g000001 Rmu_sc0001307.1_g000017 Rmu_sc0001307.1_g000019 Rmu_sc0001900.1_g000031 Rmu_sc0002912.1_g000028 Rmu_sc0006084.1_g000018 Rmu_sc0006888.1_g000063 Rmu_sc0014052.1_g000002 Rmu_sc0014052.1_g000004 Rmu_sc0022931.1_g000004
rosa_roxburghii Rroxscaffold_1G00003570 Rroxscaffold_1G00032240 Rroxscaffold_1G00032250 Rroxscaffold_2G00103090 Rroxscaffold_4G00289090 Rroxscaffold_5G00336970
rosa_rugosa Rorug03G0185900 Rorug04G0020500 Rorug04G0020600 Rorug04G0020600 Rorug04G0020700.1 Rorug04G0020800.1 Rorug04G0020900 Rorug04G0020900 Rorug04G0020900 Rorug05G0248500 Rorug05G0248500 Rorug05G0248500 Rorug05G0248600 Rorug05G0465800
rosa_samantha Rh3CG363400 Rh4DG330500 Rh4DG330600 Rh5AG245600 Rh5AG516800 Rh5AG517600 Rh5AG519000 Rh5AG519500 Rh5BG335900 Rh5BG336000 Rh5BG540700 Rh5BG542700 Rh5DG348200 Rh5DG348300 Rh5DG551900 Rh6BG185500 Rh7DG265300
rosa_wichuraiana Rw1G018240 Rw4G028270 Rw5G030690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 566
AccB7I CCANNNNNTGG 1 cut(s) 236
AccI GTMKAC 1 cut(s) 1653
AccII CGCG 1 cut(s) 1298
AciI CCGC 3 cut(s) 317, 377, 949
AcoI YGGCCR 1 cut(s) 1501
AcsI RAATTY 1 cut(s) 1420
AcuI CTGAAG 2 cut(s) 351, 1593
AcyI GRCGYC 1 cut(s) 1278
AdeI CACNNNGTG 2 cut(s) 371, 553
AfaI GTAC 3 cut(s) 62, 207, 912
AfiI CCNNNNNNNGG 6 cut(s) 236, 398, 512, 606, 1150, 1439
AflIII ACRYGT 1 cut(s) 867
AjnI CCWGG 5 cut(s) 634, 1050, 1344, 1438, 1564
Alw21I GWGCWC 2 cut(s) 180, 1317
Alw26I GTCTC 3 cut(s) 80, 1394, 1501
Alw44I GTGCAC 1 cut(s) 1313
AoxI GGCC 5 cut(s) 499, 1152, 1441, 1501, 1576
ApaLI GTGCAC 1 cut(s) 1313
ApeKI GCWGC 5 cut(s) 76, 148, 326, 1467, 1553
ApoI RAATTY 1 cut(s) 1420
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 3 cut(s) 154, 499, 1442
AsuHPI GGTGA 4 cut(s) 357, 724, 1394, 1688
AsuII TTCGAA 1 cut(s) 821
AvaII GGWCC 1 cut(s) 154
BaeGI GKGCMC 1 cut(s) 1317
BamHI GGATCC 3 cut(s) 289, 427, 1161
BanI GGYRCC 1 cut(s) 566
BanII GRGCYC 2 cut(s) 180, 1524
BarI GAAGNNNNNNTAC 2 cut(s) 903, 935
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 2 cut(s) 180, 1317
BbvI GCAGC 5 cut(s) 88, 160, 313, 1479, 1540
BccI CCATC 3 cut(s) 390, 554, 1531
BceAI ACGGC 2 cut(s) 486, 1488
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 5 cut(s) 636, 1052, 1346, 1440, 1566
BciVI GTATCC 1 cut(s) 966
BclI TGATCA 1 cut(s) 267
BcoDI GTCTC 3 cut(s) 80, 1394, 1501
BfaI CTAG 7 cut(s) 21, 38, 122, 690, 1071, 1271, 1632
BfmI CTRYAG 3 cut(s) 382, 1287, 1465
BfuI GTATCC 1 cut(s) 966
BglI GCCNNNNNGGC 1 cut(s) 1550
BglII AGATCT 2 cut(s) 295, 1063
BisI GCNGC 7 cut(s) 77, 149, 318, 327, 949, 1468, 1554
BlsI GCNGC 7 cut(s) 78, 150, 319, 328, 950, 1469, 1555
Bme1390I CCNGG 5 cut(s) 636, 1052, 1346, 1440, 1566
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 3 cut(s) 154, 499, 1442
BmiI GGNNCC 5 cut(s) 291, 429, 568, 1163, 1261
BmrFI CCNGG 5 cut(s) 636, 1052, 1346, 1440, 1566
BmsI GCATC 5 cut(s) 699, 949, 1037, 1458, 1531
BpiI GAAGAC 1 cut(s) 261
BplI GAGNNNNNCTC 2 cut(s) 416, 448
Bpu14I TTCGAA 1 cut(s) 821
BpuEI CTTGAG 1 cut(s) 728
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 1 cut(s) 1278
BsaJI CCNNGG 5 cut(s) 71, 157, 573, 1014, 1579
Bsc4I CCNNNNNNNGG 6 cut(s) 236, 398, 512, 606, 1150, 1439
Bse118I RCCGGY 2 cut(s) 344, 1038
Bse1I ACTGG 3 cut(s) 788, 1477, 1624
Bse3DI GCAATG 1 cut(s) 1465
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 5 cut(s) 636, 1052, 1346, 1440, 1566
BseDI CCNNGG 5 cut(s) 71, 157, 573, 1014, 1579
BseGI GGATG 2 cut(s) 1052, 1546
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 6 cut(s) 236, 398, 512, 606, 1150, 1439
BseMI GCAATG 1 cut(s) 1465
BseMII CTCAG 1 cut(s) 968
BseNI ACTGG 3 cut(s) 788, 1477, 1624
BseRI GAGGAG 1 cut(s) 188
BseSI GKGCMC 1 cut(s) 1317
BseXI GCAGC 5 cut(s) 88, 160, 313, 1479, 1540
BseYI CCCAGC 1 cut(s) 484
BsgI GTGCAG 1 cut(s) 688
Bsh1236I CGCG 1 cut(s) 1298
BshFI GGCC 5 cut(s) 501, 1154, 1443, 1503, 1578
BshNI GGYRCC 1 cut(s) 566
BsiHKAI GWGCWC 2 cut(s) 180, 1317
BsiSI CCGG 4 cut(s) 345, 465, 1039, 1173
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 6 cut(s) 236, 398, 512, 606, 1150, 1439
BsmAI GTCTC 3 cut(s) 80, 1394, 1501
BsmBI CGTCTC 1 cut(s) 1394
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 348
BsnI GGCC 5 cut(s) 501, 1154, 1443, 1503, 1578
Bsp119I TTCGAA 1 cut(s) 821
Bsp1286I GDGCHC 3 cut(s) 180, 1317, 1524
Bsp19I CCATGG 1 cut(s) 1014
BspACI CCGC 3 cut(s) 317, 377, 949
BspANI GGCC 5 cut(s) 501, 1154, 1443, 1503, 1578
BspCNI CTCAG 1 cut(s) 969
BspFNI CGCG 1 cut(s) 1298
BspHI TCATGA 1 cut(s) 180
BspLI GGNNCC 5 cut(s) 291, 429, 568, 1163, 1261
BspMAI CTGCAG 2 cut(s) 386, 1469
BspT104I TTCGAA 1 cut(s) 821
BspT107I GGYRCC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 1465
BsrFI RCCGGY 2 cut(s) 344, 1038
BsrI ACTGG 3 cut(s) 788, 1477, 1624
BssAI RCCGGY 2 cut(s) 344, 1038
BssECI CCNNGG 5 cut(s) 71, 157, 573, 1014, 1579
BssNI GRCGYC 1 cut(s) 1278
BssT1I CCWWGG 4 cut(s) 71, 573, 1014, 1579
Bst2UI CCWGG 5 cut(s) 636, 1052, 1346, 1440, 1566
Bst4CI ACNGT 6 cut(s) 158, 618, 910, 1255, 1291, 1319
Bst6I CTCTTC 1 cut(s) 1703
BstACI GRCGYC 1 cut(s) 1278
BstAPI GCANNNNNTGC 2 cut(s) 326, 1464
BstBI TTCGAA 1 cut(s) 821
BstC8I GCNNGC 4 cut(s) 535, 714, 1351, 1629
BstDEI CTNAG 1 cut(s) 977
BstDSI CCRYGG 2 cut(s) 157, 1014
BstF5I GGATG 2 cut(s) 1052, 1546
BstFNI CGCG 1 cut(s) 1298
BstHHI GCGC 1 cut(s) 148
BstMAI GTCTC 3 cut(s) 80, 1394, 1501
BstMWI GCNNNNNNNGC 9 cut(s) 143, 323, 326, 539, 1076, 1373, 1455, 1464, 1550
BstNI CCWGG 5 cut(s) 636, 1052, 1346, 1440, 1566
BstNSI RCATGY 2 cut(s) 634, 871
BstSCI CCNGG 5 cut(s) 634, 1050, 1344, 1438, 1564
BstSFI CTRYAG 3 cut(s) 382, 1287, 1465
BstSLI GKGCMC 1 cut(s) 1317
BstUI CGCG 1 cut(s) 1298
BstV1I GCAGC 5 cut(s) 88, 160, 313, 1479, 1540
BstV2I GAAGAC 1 cut(s) 261
BstX2I RGATCY 8 cut(s) 289, 295, 388, 427, 624, 1063, 1161, 1330
BstXI CCANNNNNNTGG 1 cut(s) 635
BstYI RGATCY 8 cut(s) 289, 295, 388, 427, 624, 1063, 1161, 1330
BsuI GTATCC 1 cut(s) 966
BsuRI GGCC 5 cut(s) 501, 1154, 1443, 1503, 1578
BtgI CCRYGG 2 cut(s) 157, 1014
BtsCI GGATG 2 cut(s) 1052, 1546
BtsI GCAGTG 2 cut(s) 594, 969
BtsIMutI CAGTG 5 cut(s) 594, 969, 1251, 1484, 1617
Cac8I GCNNGC 4 cut(s) 535, 714, 1351, 1629
CciI TCATGA 1 cut(s) 180
CfoI GCGC 1 cut(s) 148
Cfr10I RCCGGY 2 cut(s) 344, 1038
Cfr13I GGNCC 3 cut(s) 154, 499, 1442
CseI GACGC 1 cut(s) 1267
Csp6I GTAC 3 cut(s) 61, 206, 911
CviQI GTAC 3 cut(s) 61, 206, 911
DdeI CTNAG 1 cut(s) 977
DraI TTTAAA 2 cut(s) 928, 1323
DraIII CACNNNGTG 2 cut(s) 371, 553
EaeI YGGCCR 1 cut(s) 1501
Eam1104I CTCTTC 1 cut(s) 1703
EarI CTCTTC 1 cut(s) 1703
Ecl136II GAGCTC 1 cut(s) 178
Eco130I CCWWGG 4 cut(s) 71, 573, 1014, 1579
Eco24I GRGCYC 2 cut(s) 180, 1524
Eco32I GATATC 1 cut(s) 1199
Eco47I GGWCC 1 cut(s) 154
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 2 cut(s) 351, 1593
EcoICRI GAGCTC 1 cut(s) 178
EcoRII CCWGG 5 cut(s) 634, 1050, 1344, 1438, 1564
EcoRV GATATC 1 cut(s) 1199
EcoT14I CCWWGG 4 cut(s) 71, 573, 1014, 1579
EcoT22I ATGCAT 1 cut(s) 361
EcoT38I GRGCYC 2 cut(s) 180, 1524
ErhI CCWWGG 4 cut(s) 71, 573, 1014, 1579
Esp3I CGTCTC 1 cut(s) 1394
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 1 cut(s) 467
FauNDI CATATG 1 cut(s) 1734
FbaI TGATCA 1 cut(s) 267
FblI GTMKAC 1 cut(s) 1653
Fnu4HI GCNGC 7 cut(s) 77, 149, 318, 327, 949, 1468, 1554
FokI GGATG 2 cut(s) 1059, 1553
FriOI GRGCYC 2 cut(s) 180, 1524
Fsp4HI GCNGC 7 cut(s) 77, 149, 318, 327, 949, 1468, 1554
FspBI CTAG 7 cut(s) 21, 38, 122, 690, 1071, 1271, 1632
GlaI GCGC 1 cut(s) 147
GluI GCNGC 7 cut(s) 77, 149, 318, 327, 949, 1468, 1554
GsaI CCCAGC 1 cut(s) 488
HaeIII GGCC 5 cut(s) 501, 1154, 1443, 1503, 1578
HapII CCGG 4 cut(s) 345, 465, 1039, 1173
HgaI GACGC 1 cut(s) 1267
HhaI GCGC 1 cut(s) 148
Hin1I GRCGYC 1 cut(s) 1278
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HincII GTYRAC 1 cut(s) 1036
HindII GTYRAC 1 cut(s) 1036
HindIII AAGCTT 1 cut(s) 1625
HinfI GANTC 7 cut(s) 88, 579, 647, 702, 1267, 1614, 1716
HpaII CCGG 4 cut(s) 345, 465, 1039, 1173
HphI GGTGA 4 cut(s) 357, 724, 1394, 1688
Hpy166II GTNNAC 6 cut(s) 206, 1036, 1294, 1315, 1385, 1654
Hpy188I TCNGA 3 cut(s) 609, 781, 943
Hpy8I GTNNAC 6 cut(s) 206, 1036, 1294, 1315, 1385, 1654
HpyAV CCTTC 8 cut(s) 124, 178, 490, 520, 892, 929, 1039, 1568
HpyCH4III ACNGT 6 cut(s) 158, 618, 910, 1255, 1291, 1319
HpyCH4IV ACGT 1 cut(s) 510
HpyF10VI GCNNNNNNNGC 9 cut(s) 143, 323, 326, 539, 1076, 1373, 1455, 1464, 1550
HpyF3I CTNAG 1 cut(s) 977
HpySE526I ACGT 1 cut(s) 510
Hsp92I GRCGYC 1 cut(s) 1278
HspAI GCGC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 267
LmnI GCTCC 2 cut(s) 175, 1665
Lsp1109I GCAGC 5 cut(s) 88, 160, 313, 1479, 1540
LweI GCATC 5 cut(s) 699, 949, 1037, 1458, 1531
MaeI CTAG 7 cut(s) 21, 38, 122, 690, 1071, 1271, 1632
MaeII ACGT 1 cut(s) 510
MaeIII GTNAC 5 cut(s) 166, 638, 730, 1089, 1676
MboII GAAGA 6 cut(s) 53, 266, 634, 1117, 1520, 1690
MfeI CAATTG 1 cut(s) 81
MflI RGATCY 8 cut(s) 289, 295, 388, 427, 624, 1063, 1161, 1330
MhlI GDGCHC 3 cut(s) 180, 1317, 1524
MluCI AATT 9 cut(s) 81, 283, 801, 823, 1189, 1336, 1414, 1420, 1684
MlyI GAGTC 3 cut(s) 82, 641, 711
MmeI TCCRAC 5 cut(s) 217, 804, 966, 1193, 1237
Mph1103I ATGCAT 1 cut(s) 361
MseI TTAA 5 cut(s) 303, 336, 927, 984, 1322
MslI CAYNNNNRTG 1 cut(s) 263
MspA1I CMGCKG 3 cut(s) 151, 488, 857
MspI CCGG 4 cut(s) 345, 465, 1039, 1173
MspR9I CCNGG 5 cut(s) 636, 1052, 1346, 1440, 1566
MunI CAATTG 1 cut(s) 81
Mva1269I GAATGC 1 cut(s) 348
MvaI CCWGG 5 cut(s) 636, 1052, 1346, 1440, 1566
MvnI CGCG 1 cut(s) 1298
MwoI GCNNNNNNNGC 9 cut(s) 143, 323, 326, 539, 1076, 1373, 1455, 1464, 1550
NcoI CCATGG 1 cut(s) 1014
NdeI CATATG 1 cut(s) 1734
NlaIV GGNNCC 5 cut(s) 291, 429, 568, 1163, 1261
NmuCI GTSAC 4 cut(s) 166, 730, 1089, 1676
NsiI ATGCAT 1 cut(s) 361
NspI RCATGY 2 cut(s) 634, 871
NspV TTCGAA 1 cut(s) 821
PagI TCATGA 1 cut(s) 180
PciI ACATGT 1 cut(s) 867
PctI GAATGC 1 cut(s) 348
PfeI GAWTC 4 cut(s) 579, 1267, 1614, 1716
PflFI GACNNNGTC 1 cut(s) 728
PflMI CCANNNNNTGG 1 cut(s) 236
PkrI GCNGC 7 cut(s) 78, 150, 319, 328, 950, 1469, 1555
PleI GAGTC 3 cut(s) 82, 641, 710
PpsI GAGTC 3 cut(s) 82, 641, 710
PscI ACATGT 1 cut(s) 867
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 5 cut(s) 634, 1050, 1344, 1438, 1564
PspFI CCCAGC 1 cut(s) 484
PspGI CCWGG 5 cut(s) 634, 1050, 1344, 1438, 1564
PspN4I GGNNCC 5 cut(s) 291, 429, 568, 1163, 1261
PspPI GGNCC 3 cut(s) 154, 499, 1442
PstI CTGCAG 2 cut(s) 386, 1469
PsuI RGATCY 8 cut(s) 289, 295, 388, 427, 624, 1063, 1161, 1330
PsyI GACNNNGTC 1 cut(s) 728
PvuII CAGCTG 3 cut(s) 151, 488, 857
RsaI GTAC 3 cut(s) 62, 207, 912
RsaNI GTAC 3 cut(s) 61, 206, 911
RseI CAYNNNNRTG 1 cut(s) 263
SacI GAGCTC 1 cut(s) 180
SaqAI TTAA 5 cut(s) 303, 336, 927, 984, 1322
SatI GCNGC 7 cut(s) 77, 149, 318, 327, 949, 1468, 1554
Sau96I GGNCC 3 cut(s) 154, 499, 1442
SchI GAGTC 3 cut(s) 82, 641, 711
ScrFI CCNGG 5 cut(s) 636, 1052, 1346, 1440, 1566
SduI GDGCHC 3 cut(s) 180, 1317, 1524
SfaNI GCATC 5 cut(s) 699, 949, 1037, 1458, 1531
SfcI CTRYAG 3 cut(s) 382, 1287, 1465
SfuI TTCGAA 1 cut(s) 821
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 1 cut(s) 263
SmlI CTYRAG 1 cut(s) 743
SmoI CTYRAG 1 cut(s) 743
Sse9I AATT 9 cut(s) 81, 283, 801, 823, 1189, 1336, 1414, 1420, 1684
SsiI CCGC 3 cut(s) 317, 377, 949
SspMI CTAG 7 cut(s) 21, 38, 122, 690, 1071, 1271, 1632
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 5 cut(s) 634, 1050, 1344, 1438, 1564
StyI CCWWGG 4 cut(s) 71, 573, 1014, 1579
TaaI ACNGT 6 cut(s) 158, 618, 910, 1255, 1291, 1319
TaiI ACGT 1 cut(s) 513
TaqI TCGA 7 cut(s) 91, 112, 261, 821, 915, 1005, 1060
TasI AATT 9 cut(s) 81, 283, 801, 823, 1189, 1336, 1414, 1420, 1684
TatI WGTACW 2 cut(s) 205, 910
TauI GCSGC 2 cut(s) 320, 951
TfiI GAWTC 4 cut(s) 579, 1267, 1614, 1716
Tru1I TTAA 5 cut(s) 303, 336, 927, 984, 1322
Tru9I TTAA 5 cut(s) 303, 336, 927, 984, 1322
TscAI CASTG 5 cut(s) 601, 969, 1258, 1484, 1624
TseFI GTSAC 4 cut(s) 166, 730, 1089, 1676
TseI GCWGC 5 cut(s) 76, 148, 326, 1467, 1553
Tsp45I GTSAC 4 cut(s) 166, 730, 1089, 1676
TspDTI ATGAA 9 cut(s) 63, 197, 267, 426, 627, 672, 862, 979, 1682
TspGWI ACGGA 3 cut(s) 185, 801, 1125
TspRI CASTG 5 cut(s) 601, 969, 1258, 1484, 1624
Tth111I GACNNNGTC 1 cut(s) 728
Van91I CCANNNNNTGG 1 cut(s) 236
VneI GTGCAC 1 cut(s) 1313
VpaK11BI GGWCC 1 cut(s) 154
XapI RAATTY 1 cut(s) 1420
XbaI TCTAGA 1 cut(s) 20
XceI RCATGY 2 cut(s) 634, 871
XmiI GTMKAC 1 cut(s) 1653
XspI CTAG 7 cut(s) 21, 38, 122, 690, 1071, 1271, 1632
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.