RchiOBHm_Chr5g0049431

xylan 1,4-beta-xylosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000625
Physical Location & Seq
Reverse (-)
47004780 .. 47007949
3170 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32709

Sequence Viewer

Length: 1890 bp
ATGAAAAGGATAAATTCTTCAGTCCTGTTAGTGGGACTTGCGTGCCTATGTTGCTGGGCGGCCATGACAGAAGCAAGGTTATCTAGACAGCACAGGAAACTAGAAGATAATGAATACATGGCATACAAAGACCCTAGGCAGCCAATCGAGACTCGAATAAATGACCTTATGGATCGAATGACACTAGACGAGAAGGTTGCTCAAATGGCGCAGCTGGACCGTGGTAGTGTCACGGAGGAGCTTATGAAGGAACACAACATAGGAAGTGTACTGAATGGGGGAGAGAGTTTGCCAAGAGTTGGACTTACTGCGTATGAAGACATCGACATGATCAACAAGTTTCAAAATTGGTCACTTCAAAGCCGGCTTGCAATCCCTATTATTTATGGCATTGATGCCGTTCATGGCCACAATAATGTCTACAAGGCCACATTGGATCCAGATCTTATTAAGAGGATAGGTGCGGCAACTGCCGCTGAAGTTAAAGCTACCGGCATTCAATATGCATTTTCACCATGTGTTGCGGTCTGCAGAGATCCAAGATGGGGTAGGTGTTATGAAAGTTTTAGCGAGGATCCCTCCATTGTAAGACAAATGACTGAAATAATAGCCGGATTGCAAGGCGAAGTCCCAGCTGGACAGAAAGGCCATCCTTACGTTGGTGGAAAGGAGAAGGTAGCTGGCTGTGCAAAGCACTATGTGGGAGATGGTGGCACCATCAAGGGAATCAATGAGAACAACACTGCCATTGATCGGAATGAACTGTTGAAGATCCACATGCCTGGTTACTTGGACTCTATTGACAAGGGTGTGTGCAGTATCATGGTTTCATACTCTAGCTTGAATGGAGTCAAGATGCACGCTAACCATGACCTTGTCACCAACTATCTCAAGGACACCTTGAAGTTCAAGGGTTTTGTCATCTCCGACTGGCAGGGTCTTGACAAAATTACCTATCCGTTCCATTCGAATTACACATACTCGGTTCTTGCTGGTGTTACAGCTGGTATTGACATGTTCATACTTCCCTTCAACTATACAGAGTTCCATGATACTGTACTCGACCTTCACTTTAAAAACCTAATATCCGACAGCCGCATTGATGATGCAGTGTATAGGATACTGAGGATTAAGTTCATAATGGGTCTGTTCGACAACCCCATGGCTGATTATACCTTCGTTGACCGGCTTGGATGCCAGGCTCATCGAGATCTGGCAAGGGAGGCAGTAAGGAAGTCACTTGTTCTTTTGAAGAACGGAAAAAAACCAAACACACCATTCCTGCCTCTCCCTAAAAAGGCCAATAGGATCCTTGTTGCCGGAACTCATGCAAACAATTTGGGATATCAATGTGGTGGTTGGAGTATCACTTGGCAAGGAGTAAGTGGCAATAACAACACTGTTGGAACCACGATTCTAGGTGGCGTCATAGCTACAGTTTACGCGACAACAGAAGTTGTGCACAGTTTAAATCCAGATCCTGATTTTATCAAGGCAAGCAACATTGACTATGCCATTGTTGCTGTTGGTGAACCCCCTTACGCAGAGACGAAAGGGGATAATTTGAATTTGACCATTCCAGAACCAGGCCCAAGCATCATTAGCAATGTCTGCAGCGTAGTCCAGTGTGTTGTTATTGTTGTCTCTGGCCGTCCTCTTGTGATTGAGCCCTATCTTCCAATGATGGATGCCCTTGTGGCTGCATGGCTACCTGGAACTGAAGGCCAAGGAGTTGCTGATGTTCTTTTCGGGGATTATGGATTCACTGGAAAGCTTGCTAGGACTTGGTTCAAGAGAGTAGACCAGCTCCCTATGAATGTTGGTGACAAAAATTATGATCCCCTCTTCCCCTTTGGTTTTGGAATCACAACTGAACCACATATGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

629

Amino Acids

69.48

Weight (kDa)

6.26

Isoelectric Point (pI)

27.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 61 - 377 3.7e-55 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 414 - 623 1.6e-36 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000625)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47010 AT3G47040 AT3G47050
fragaria_vesca FvH4_1g28352 FvH4_3g26960 FvH4_7g05180
malus_domestica MD02G1089300.v1.1 MD02G1259900.v1.1 MD14G1004400.v1.1
prunus_persica Prupe.2G065700_v2.0.a1 Prupe.2G092700_v2.0.a1 Prupe.7G007100_v2.0.a1 Prupe.7G007700_v2.0.a1
pyrus_communis pycom02g22100 pycom07g04670 pycom11g06820 pycom11g15190 pycom14g00200 pycom14g00230
rosa_chinensis RchiOBHm_Chr5g0049431 RchiOBHm_Chr5g0049441 RchiOBHm_Chr5g0079371 RchiOBHm_Chr6g0274311
rosa_laevigata RLG00000006403 RLG00000008403 RLG00000028847 RLG00000034618
rosa_multiflora Rmu_co8385859.1_g000001 Rmu_sc0000376.1_g000001 Rmu_sc0001307.1_g000017 Rmu_sc0001307.1_g000019 Rmu_sc0001900.1_g000031 Rmu_sc0002912.1_g000028 Rmu_sc0006084.1_g000018 Rmu_sc0006888.1_g000063 Rmu_sc0014052.1_g000002 Rmu_sc0014052.1_g000004 Rmu_sc0022931.1_g000004
rosa_roxburghii Rroxscaffold_1G00003570 Rroxscaffold_1G00032240 Rroxscaffold_1G00032250 Rroxscaffold_2G00103090 Rroxscaffold_4G00289090 Rroxscaffold_5G00336970
rosa_rugosa Rorug03G0185900 Rorug04G0020500 Rorug04G0020600 Rorug04G0020600 Rorug04G0020700.1 Rorug04G0020800.1 Rorug04G0020900 Rorug04G0020900 Rorug04G0020900 Rorug05G0248500 Rorug05G0248500 Rorug05G0248500 Rorug05G0248600 Rorug05G0465800
rosa_samantha Rh3CG363400 Rh4DG330500 Rh4DG330600 Rh5AG245600 Rh5AG516800 Rh5AG517600 Rh5AG519000 Rh5AG519500 Rh5BG335900 Rh5BG336000 Rh5BG540700 Rh5BG542700 Rh5DG348200 Rh5DG348300 Rh5DG551900 Rh6BG185500 Rh7DG265300
rosa_wichuraiana Rw1G018240 Rw4G028270 Rw5G030690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 713
AccB7I CCANNNNNTGG 1 cut(s) 299
AccI GTMKAC 2 cut(s) 420, 1800
AccII CGCG 1 cut(s) 1445
AciI CCGC 5 cut(s) 59, 464, 474, 524, 1096
AcoI YGGCCR 3 cut(s) 60, 406, 1648
AcsI RAATTY 2 cut(s) 13, 1567
AcuI CTGAAG 2 cut(s) 498, 1740
AcyI GRCGYC 1 cut(s) 1425
AdeI CACNNNGTG 2 cut(s) 518, 700
AfaI GTAC 2 cut(s) 270, 1059
AfiI CCNNNNNNNGG 7 cut(s) 31, 299, 545, 659, 753, 1297, 1586
AflIII ACRYGT 1 cut(s) 1014
AjnI CCWGG 4 cut(s) 781, 1197, 1585, 1711
Alw21I GWGCWC 1 cut(s) 1464
Alw26I GTCTC 3 cut(s) 143, 1541, 1648
Alw44I GTGCAC 1 cut(s) 1460
AlwNI CAGNNNCTG 1 cut(s) 1481
AoxI GGCC 8 cut(s) 60, 406, 426, 646, 1299, 1588, 1648, 1723
ApaLI GTGCAC 1 cut(s) 1460
ApeKI GCWGC 4 cut(s) 139, 211, 1614, 1700
ApoI RAATTY 2 cut(s) 13, 1567
AspA2I CCTAGG 1 cut(s) 134
AspLEI GCGC 1 cut(s) 211
AspS9I GGNCC 2 cut(s) 217, 1589
AsuHPI GGTGA 4 cut(s) 504, 871, 1541, 1835
AsuII TTCGAA 1 cut(s) 968
AvaII GGWCC 1 cut(s) 217
AvrII CCTAGG 1 cut(s) 134
BaeGI GKGCMC 1 cut(s) 1464
BalI TGGCCA 1 cut(s) 408
BamHI GGATCC 3 cut(s) 436, 574, 1308
BanI GGYRCC 1 cut(s) 713
BanII GRGCYC 1 cut(s) 1671
BarI GAAGNNNNNNTAC 2 cut(s) 1050, 1082
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 1464
BbvI GCAGC 4 cut(s) 151, 223, 1626, 1687
BccI CCATC 5 cut(s) 537, 657, 701, 725, 1678
BceAI ACGGC 2 cut(s) 383, 1635
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 4 cut(s) 783, 1199, 1587, 1713
BciVI GTATCC 1 cut(s) 1113
BclI TGATCA 1 cut(s) 330
BcoDI GTCTC 3 cut(s) 143, 1541, 1648
BfaI CTAG 7 cut(s) 84, 101, 135, 185, 837, 1418, 1779
BfmI CTRYAG 3 cut(s) 529, 1434, 1612
BfuI GTATCC 1 cut(s) 1113
BglI GCCNNNNNGGC 1 cut(s) 1697
BglII AGATCT 2 cut(s) 442, 1210
BisI GCNGC 8 cut(s) 60, 140, 212, 465, 474, 1096, 1615, 1701
BlnI CCTAGG 1 cut(s) 134
BlsI GCNGC 8 cut(s) 61, 141, 213, 466, 475, 1097, 1616, 1702
Bme1390I CCNGG 4 cut(s) 783, 1199, 1587, 1713
Bme18I GGWCC 1 cut(s) 217
BmgT120I GGNCC 2 cut(s) 217, 1589
BmiI GGNNCC 5 cut(s) 438, 576, 715, 1310, 1408
BmrFI CCNGG 4 cut(s) 783, 1199, 1587, 1713
BmsI GCATC 6 cut(s) 385, 846, 1096, 1184, 1605, 1678
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 563, 595
Bpu14I TTCGAA 1 cut(s) 968
BpuEI CTTGAG 1 cut(s) 875
BsaBI GATNNNNATC 1 cut(s) 441
BsaHI GRCGYC 1 cut(s) 1425
BsaJI CCNNGG 4 cut(s) 134, 220, 1161, 1726
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 299, 545, 659, 753, 1297, 1586
Bse118I RCCGGY 3 cut(s) 363, 491, 1185
Bse1I ACTGG 3 cut(s) 935, 1624, 1771
Bse3DI GCAATG 1 cut(s) 1612
Bse8I GATNNNNATC 1 cut(s) 441
BseBI CCWGG 4 cut(s) 783, 1199, 1587, 1713
BseDI CCNNGG 4 cut(s) 134, 220, 1161, 1726
BseGI GGATG 3 cut(s) 649, 1199, 1693
BseJI GATNNNNATC 1 cut(s) 441
BseLI CCNNNNNNNGG 7 cut(s) 31, 299, 545, 659, 753, 1297, 1586
BseMI GCAATG 1 cut(s) 1612
BseMII CTCAG 1 cut(s) 1115
BseNI ACTGG 3 cut(s) 935, 1624, 1771
BseRI GAGGAG 1 cut(s) 251
BseSI GKGCMC 1 cut(s) 1464
BseXI GCAGC 4 cut(s) 151, 223, 1626, 1687
BseYI CCCAGC 2 cut(s) 54, 631
BsgI GTGCAG 1 cut(s) 835
Bsh1236I CGCG 1 cut(s) 1445
BshFI GGCC 8 cut(s) 62, 408, 428, 648, 1301, 1590, 1650, 1725
BshNI GGYRCC 1 cut(s) 713
BsiHKAI GWGCWC 1 cut(s) 1464
BsiSI CCGG 5 cut(s) 364, 492, 612, 1186, 1320
BslFI GGGAC 2 cut(s) 48, 614
BslI CCNNNNNNNGG 7 cut(s) 31, 299, 545, 659, 753, 1297, 1586
BsmAI GTCTC 3 cut(s) 143, 1541, 1648
BsmBI CGTCTC 1 cut(s) 1541
BsmFI GGGAC 2 cut(s) 48, 614
BsmI GAATGC 1 cut(s) 495
BsnI GGCC 8 cut(s) 62, 408, 428, 648, 1301, 1590, 1650, 1725
Bsp119I TTCGAA 1 cut(s) 968
Bsp1286I GDGCHC 2 cut(s) 1464, 1671
Bsp19I CCATGG 1 cut(s) 1161
BspACI CCGC 5 cut(s) 59, 464, 474, 524, 1096
BspANI GGCC 8 cut(s) 62, 408, 428, 648, 1301, 1590, 1650, 1725
BspCNI CTCAG 1 cut(s) 1116
BspFNI CGCG 1 cut(s) 1445
BspLI GGNNCC 5 cut(s) 438, 576, 715, 1310, 1408
BspMAI CTGCAG 2 cut(s) 533, 1616
BspT104I TTCGAA 1 cut(s) 968
BspT107I GGYRCC 1 cut(s) 713
BsrDI GCAATG 1 cut(s) 1612
BsrFI RCCGGY 3 cut(s) 363, 491, 1185
BsrI ACTGG 3 cut(s) 935, 1624, 1771
BssAI RCCGGY 3 cut(s) 363, 491, 1185
BssECI CCNNGG 4 cut(s) 134, 220, 1161, 1726
BssNI GRCGYC 1 cut(s) 1425
BssT1I CCWWGG 3 cut(s) 134, 1161, 1726
Bst2UI CCWGG 4 cut(s) 783, 1199, 1587, 1713
Bst4CI ACNGT 6 cut(s) 221, 765, 1057, 1402, 1438, 1466
Bst6I CTCTTC 1 cut(s) 1850
BstACI GRCGYC 1 cut(s) 1425
BstAPI GCANNNNNTGC 1 cut(s) 1611
BstBI TTCGAA 1 cut(s) 968
BstC8I GCNNGC 7 cut(s) 43, 365, 369, 682, 861, 1498, 1776
BstDEI CTNAG 1 cut(s) 1124
BstDSI CCRYGG 2 cut(s) 220, 1161
BstF5I GGATG 3 cut(s) 649, 1199, 1693
BstFNI CGCG 1 cut(s) 1445
BstHHI GCGC 1 cut(s) 211
BstMAI GTCTC 3 cut(s) 143, 1541, 1648
BstNI CCWGG 4 cut(s) 783, 1199, 1587, 1713
BstNSI RCATGY 2 cut(s) 781, 1018
BstSCI CCNGG 4 cut(s) 781, 1197, 1585, 1711
BstSFI CTRYAG 3 cut(s) 529, 1434, 1612
BstSLI GKGCMC 1 cut(s) 1464
BstUI CGCG 1 cut(s) 1445
BstV1I GCAGC 4 cut(s) 151, 223, 1626, 1687
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 8 cut(s) 436, 442, 535, 574, 771, 1210, 1308, 1477
BstXI CCANNNNNNTGG 1 cut(s) 782
BstYI RGATCY 8 cut(s) 436, 442, 535, 574, 771, 1210, 1308, 1477
BsuI GTATCC 1 cut(s) 1113
BsuRI GGCC 8 cut(s) 62, 408, 428, 648, 1301, 1590, 1650, 1725
BtgI CCRYGG 2 cut(s) 220, 1161
BtsCI GGATG 3 cut(s) 649, 1199, 1693
BtsI GCAGTG 2 cut(s) 741, 1116
BtsIMutI CAGTG 5 cut(s) 741, 1116, 1398, 1631, 1764
Cac8I GCNNGC 7 cut(s) 43, 365, 369, 682, 861, 1498, 1776
CaiI CAGNNNCTG 1 cut(s) 1481
CfoI GCGC 1 cut(s) 211
Cfr10I RCCGGY 3 cut(s) 363, 491, 1185
Cfr13I GGNCC 2 cut(s) 217, 1589
CseI GACGC 1 cut(s) 1414
Csp6I GTAC 2 cut(s) 269, 1058
CviQI GTAC 2 cut(s) 269, 1058
DdeI CTNAG 1 cut(s) 1124
DraI TTTAAA 2 cut(s) 1075, 1470
DraIII CACNNNGTG 2 cut(s) 518, 700
EaeI YGGCCR 3 cut(s) 60, 406, 1648
Eam1104I CTCTTC 1 cut(s) 1850
EarI CTCTTC 1 cut(s) 1850
Eco130I CCWWGG 3 cut(s) 134, 1161, 1726
Eco24I GRGCYC 1 cut(s) 1671
Eco32I GATATC 1 cut(s) 1346
Eco47I GGWCC 1 cut(s) 217
Eco57I CTGAAG 2 cut(s) 498, 1740
EcoRII CCWGG 4 cut(s) 781, 1197, 1585, 1711
EcoRV GATATC 1 cut(s) 1346
EcoT14I CCWWGG 3 cut(s) 134, 1161, 1726
EcoT22I ATGCAT 1 cut(s) 508
EcoT38I GRGCYC 1 cut(s) 1671
ErhI CCWWGG 3 cut(s) 134, 1161, 1726
Esp3I CGTCTC 1 cut(s) 1541
FalI AAGNNNNNCTT 2 cut(s) 884, 916
FaqI GGGAC 2 cut(s) 48, 614
FauNDI CATATG 1 cut(s) 1881
FbaI TGATCA 1 cut(s) 330
FblI GTMKAC 2 cut(s) 420, 1800
Fnu4HI GCNGC 8 cut(s) 60, 140, 212, 465, 474, 1096, 1615, 1701
FokI GGATG 3 cut(s) 636, 1206, 1700
FriOI GRGCYC 1 cut(s) 1671
Fsp4HI GCNGC 8 cut(s) 60, 140, 212, 465, 474, 1096, 1615, 1701
FspBI CTAG 7 cut(s) 84, 101, 135, 185, 837, 1418, 1779
GlaI GCGC 1 cut(s) 210
GluI GCNGC 8 cut(s) 60, 140, 212, 465, 474, 1096, 1615, 1701
GsaI CCCAGC 2 cut(s) 58, 635
HaeIII GGCC 8 cut(s) 62, 408, 428, 648, 1301, 1590, 1650, 1725
HapII CCGG 5 cut(s) 364, 492, 612, 1186, 1320
HgaI GACGC 1 cut(s) 1414
HhaI GCGC 1 cut(s) 211
Hin1I GRCGYC 1 cut(s) 1425
Hin6I GCGC 1 cut(s) 209
HinP1I GCGC 1 cut(s) 209
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 1772
HinfI GANTC 7 cut(s) 151, 726, 794, 849, 1414, 1761, 1863
HpaII CCGG 5 cut(s) 364, 492, 612, 1186, 1320
HphI GGTGA 4 cut(s) 504, 871, 1541, 1835
Hpy166II GTNNAC 7 cut(s) 269, 421, 1183, 1441, 1462, 1532, 1801
Hpy188I TCNGA 3 cut(s) 756, 928, 1090
Hpy8I GTNNAC 7 cut(s) 269, 421, 1183, 1441, 1462, 1532, 1801
HpyAV CCTTC 7 cut(s) 187, 241, 667, 1039, 1076, 1186, 1715
HpyCH4III ACNGT 6 cut(s) 221, 765, 1057, 1402, 1438, 1466
HpyCH4IV ACGT 1 cut(s) 657
HpyF3I CTNAG 1 cut(s) 1124
HpySE526I ACGT 1 cut(s) 657
Hsp92I GRCGYC 1 cut(s) 1425
HspAI GCGC 1 cut(s) 209
KroI GCCGGC 1 cut(s) 363
KroNI GCCGGC 1 cut(s) 365
Ksp22I TGATCA 1 cut(s) 330
LmnI GCTCC 2 cut(s) 238, 1812
Lsp1109I GCAGC 4 cut(s) 151, 223, 1626, 1687
LweI GCATC 6 cut(s) 385, 846, 1096, 1184, 1605, 1678
MaeI CTAG 7 cut(s) 84, 101, 135, 185, 837, 1418, 1779
MaeII ACGT 1 cut(s) 657
MaeIII GTNAC 7 cut(s) 229, 351, 785, 877, 997, 1236, 1823
MboII GAAGA 7 cut(s) 9, 116, 329, 781, 1264, 1667, 1837
MflI RGATCY 8 cut(s) 436, 442, 535, 574, 771, 1210, 1308, 1477
MhlI GDGCHC 2 cut(s) 1464, 1671
MlsI TGGCCA 1 cut(s) 408
MluCI AATT 8 cut(s) 13, 346, 948, 970, 1336, 1561, 1567, 1831
MluNI TGGCCA 1 cut(s) 408
MlyI GAGTC 3 cut(s) 145, 788, 858
MmeI TCCRAC 5 cut(s) 280, 951, 1113, 1340, 1384
Mox20I TGGCCA 1 cut(s) 408
Mph1103I ATGCAT 1 cut(s) 508
MroNI GCCGGC 1 cut(s) 363
MscI TGGCCA 1 cut(s) 408
MseI TTAA 5 cut(s) 450, 483, 1074, 1131, 1469
MslI CAYNNNNRTG 2 cut(s) 326, 414
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 4 cut(s) 214, 476, 635, 1004
MspI CCGG 5 cut(s) 364, 492, 612, 1186, 1320
MspR9I CCNGG 4 cut(s) 783, 1199, 1587, 1713
Mva1269I GAATGC 1 cut(s) 495
MvaI CCWGG 4 cut(s) 783, 1199, 1587, 1713
MvnI CGCG 1 cut(s) 1445
NaeI GCCGGC 1 cut(s) 365
NcoI CCATGG 1 cut(s) 1161
NdeI CATATG 1 cut(s) 1881
NgoMIV GCCGGC 1 cut(s) 363
NlaIV GGNNCC 5 cut(s) 438, 576, 715, 1310, 1408
NmuCI GTSAC 5 cut(s) 229, 351, 877, 1236, 1823
NsiI ATGCAT 1 cut(s) 508
NspI RCATGY 2 cut(s) 781, 1018
NspV TTCGAA 1 cut(s) 968
PciI ACATGT 1 cut(s) 1014
PctI GAATGC 1 cut(s) 495
PdiI GCCGGC 1 cut(s) 365
PfeI GAWTC 4 cut(s) 726, 1414, 1761, 1863
PflFI GACNNNGTC 1 cut(s) 875
PflMI CCANNNNNTGG 1 cut(s) 299
PkrI GCNGC 8 cut(s) 61, 141, 213, 466, 475, 1097, 1616, 1702
PleI GAGTC 3 cut(s) 145, 788, 857
PpsI GAGTC 3 cut(s) 145, 788, 857
PscI ACATGT 1 cut(s) 1014
Psp6I CCWGG 4 cut(s) 781, 1197, 1585, 1711
PspFI CCCAGC 2 cut(s) 54, 631
PspGI CCWGG 4 cut(s) 781, 1197, 1585, 1711
PspN4I GGNNCC 5 cut(s) 438, 576, 715, 1310, 1408
PspPI GGNCC 2 cut(s) 217, 1589
PstI CTGCAG 2 cut(s) 533, 1616
PstNI CAGNNNCTG 1 cut(s) 1481
PsuI RGATCY 8 cut(s) 436, 442, 535, 574, 771, 1210, 1308, 1477
PsyI GACNNNGTC 1 cut(s) 875
PvuII CAGCTG 3 cut(s) 214, 635, 1004
RsaI GTAC 2 cut(s) 270, 1059
RsaNI GTAC 2 cut(s) 269, 1058
RseI CAYNNNNRTG 2 cut(s) 326, 414
SaqAI TTAA 5 cut(s) 450, 483, 1074, 1131, 1469
SatI GCNGC 8 cut(s) 60, 140, 212, 465, 474, 1096, 1615, 1701
Sau96I GGNCC 2 cut(s) 217, 1589
SchI GAGTC 3 cut(s) 145, 788, 858
ScrFI CCNGG 4 cut(s) 783, 1199, 1587, 1713
SduI GDGCHC 2 cut(s) 1464, 1671
SfaNI GCATC 6 cut(s) 385, 846, 1096, 1184, 1605, 1678
SfcI CTRYAG 3 cut(s) 529, 1434, 1612
SfuI TTCGAA 1 cut(s) 968
SinI GGWCC 1 cut(s) 217
SmiMI CAYNNNNRTG 2 cut(s) 326, 414
SmlI CTYRAG 1 cut(s) 890
SmoI CTYRAG 1 cut(s) 890
Sse9I AATT 8 cut(s) 13, 346, 948, 970, 1336, 1561, 1567, 1831
SsiI CCGC 5 cut(s) 59, 464, 474, 524, 1096
SspMI CTAG 7 cut(s) 84, 101, 135, 185, 837, 1418, 1779
StyD4I CCNGG 4 cut(s) 781, 1197, 1585, 1711
StyI CCWWGG 3 cut(s) 134, 1161, 1726
TaaI ACNGT 6 cut(s) 221, 765, 1057, 1402, 1438, 1466
TaiI ACGT 1 cut(s) 660
TaqI TCGA 8 cut(s) 147, 154, 175, 324, 968, 1062, 1152, 1207
TasI AATT 8 cut(s) 13, 346, 948, 970, 1336, 1561, 1567, 1831
TatI WGTACW 2 cut(s) 268, 1057
TauI GCSGC 4 cut(s) 62, 467, 476, 1098
TfiI GAWTC 4 cut(s) 726, 1414, 1761, 1863
Tru1I TTAA 5 cut(s) 450, 483, 1074, 1131, 1469
Tru9I TTAA 5 cut(s) 450, 483, 1074, 1131, 1469
TscAI CASTG 5 cut(s) 748, 1116, 1405, 1631, 1771
TseFI GTSAC 5 cut(s) 229, 351, 877, 1236, 1823
TseI GCWGC 4 cut(s) 139, 211, 1614, 1700
Tsp45I GTSAC 5 cut(s) 229, 351, 877, 1236, 1823
TspGWI ACGGA 3 cut(s) 248, 948, 1272
TspRI CASTG 5 cut(s) 748, 1116, 1405, 1631, 1771
Tth111I GACNNNGTC 1 cut(s) 875
Van91I CCANNNNNTGG 1 cut(s) 299
VneI GTGCAC 1 cut(s) 1460
VpaK11BI GGWCC 1 cut(s) 217
XapI RAATTY 2 cut(s) 13, 1567
XbaI TCTAGA 1 cut(s) 83
XceI RCATGY 2 cut(s) 781, 1018
XcmI CCANNNNNNNNNTGG 1 cut(s) 656
XmaJI CCTAGG 1 cut(s) 134
XmiI GTMKAC 2 cut(s) 420, 1800
XspI CTAG 7 cut(s) 84, 101, 135, 185, 837, 1418, 1779
Zsp2I ATGCAT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.