Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Reverse (-)

21287072 .. 21290681

Gene Structure 3610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1177800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGATAAAGCCGAGTTCATCAGTCCTCTTAGTGGGACTTTTTTGCCTTTGCTGCTGGACAGAAATGACAAAGGGAGAAGAAGAGGACATGAAATACAAGAACCCTAAATATAGTATTAATGATCGGGTAGAGGACCTTCTAGCCCGAATGACGCTAGAAGAAAAGATCGGTCAGATGGCACAAGTAGACCGCGGCAATATCACAGCTGAGGTCATGAAGGAGTACAATATAGGCAGTATTCTGAGTGGCGGGGAGAGTGTGCCACGAACACAGGCTACTACGCAAGATTGGGTCGACATGATCAACAAGTTTCAGAATTGGTCACTTGCAACTCGGCTTGGAATCCCTATGATTTACGGCATTGATGCGGTTCATGGCCACAACAATGTGTTCAAGGCCACAATCTTCCCGCATAATGTTGGACTTGGAGCTACCAGGGATCGAGAACTTATCAGGAGGATTGGTGCTGCAACTGCTCTTGAAGTTAGAGCTACTGGCATTCAGTATACATTTGCACCATGCGTCGCGGTCTGCAGAGATCCGAGATGGGGTAGGTGTTACGAGAGTTACAGCGAGGATCCCAGTATCGTAAAACAAATGTCCGAATTAGTGATTGGATTGCAAGGTGAAATTCCAGCTGGTTCACCAAAGGGTGTTCCTTACGTTGGTGGACCGGATAAGGTGGCGGCCTCTGCAAAGCACTTTGTGGGAGATGGCGGCACCACCAACGGCATCAACGAGAACAACACTGTGATTGATTGGCAAGGATTGTTCGAAATTCACATGCCTGGTTATATCGAGAGCATAGCCAAGGGTGTATCCACTGTCATGGTGTCCTACTCCAGCTGGAACGGAGTCAAGATGCACGCTAACTATGAACTCATCACCAAATATCTTAAGGACACCCTTAACTTTAAGGGTGTTGTCATCTCTGACTGGCTGGGTGTTGACAAAATTTCGAATCCACCCATGACGAATTATTCGAACTCGCTACTTCTTAGCATTCAAGCTGGTCTTGACATGATCATGATTCCCCACAACTATACTTTCTTTGTCAAATTTCTAACCAACCATGTCAACGAGAATCGAATCCCAATGAGCCGTATCGATGATGCAGTTAGGAGAATACTATCTCTCAAGTTCATGATGGGTCTGTTCGAAAAGCCAATGGCGAGTTACGAATATATTCCCTGGCTTGGATGCCAGGCACACAGAGATTTGGGAAGGGAAGCTGTGAGGAAGTCACTAGTTCTTTTGAAGAATGGAAAAACCCCAAATGATGCACCAATGCTGCCACTCCCAAGAACGGCCAAAAGGATCCTTGTTGCTGGAACCCATGCCAACAATTTGGGCTATCAATGTGGGGGTTGGAGTCTCACTTGGCAAGGAGTTAGTGGCAACAACCATACTGTTGGAACCACAATACTAGGTGCCATCACAAAAGCAGTTAACGAGACCACAGAAATTTTCTACAGTGTAAATCCCGATCTTGAACTTGTCACGTTAGGTAAGTTCGATTACGCTGTGGTTGCTGTTGGTGAGCTCCCCTACGCTGAGACGAAAGGGGACGATTCAAATTTGACAATGATAGAACCAGGTCCGAGCGTTATAAAAAACATATGTGGGGCAGTCAAGTGTGTTGTGATCGTAGTATCTGGGCGTCCGATTGTGATGGAGCCCTACATTTCGTCGATTGATGCTCTCGTGGCTGCGTGGCTCCCCGGAACAGAAGGCCAAGGAATCGCTGATGTTCTATATGGTGACTATGGATTCACTGGAAAGCTTGCTAGGACATGGTTCAAGAGAGTAGATCAGCTCCCTATGAATGTTGGTGACAAAGATTATGATCCCCTCTTTCCCTATGGTTTTGGACTTACAACTCAACCTAACGCCAACTCAACTTCGGCAAACTCAGCGGGAGCGGCTGCTCCTAGATCATCTCAAGCATCTTGGTCAAGCGTGTTGTTATCGTTGTCTCTTGGAGCCCTGTTGTGGTTGAGCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0000323 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

669

Amino Acids

73.15

Weight (kDa)

6.34

Isoelectric Point (pI)

27.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	51 - 379	1.8e-76	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	417 - 626	1.1e-36	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1610
AccB1I	GGYRCC	2 cut(s)	719, 1430
AccBSI	CCGCTC	1 cut(s)	1922
AccI	GTMKAC	3 cut(s)	186, 294, 506
AccII	CGCG	2 cut(s)	192, 527
AclWI	GGATC	7 cut(s)	447, 533, 572, 585, 1312, 1325, 1841
AcoI	YGGCCR	2 cut(s)	376, 1308
AcsI	RAATTY	6 cut(s)	630, 777, 954, 1058, 1464, 1576
AcyI	GRCGYC	1 cut(s)	1660
AdeI	CACNNNGTG	1 cut(s)	706
AfaI	GTAC	1 cut(s)	224
AfiI	CCNNNNNNNGG	6 cut(s)	31, 548, 665, 1196, 1306, 1992
AflII	CTTAAG	1 cut(s)	896
AgsI	TTSAA	7 cut(s)	394, 482, 1007, 1258, 1493, 1575, 1801
AhlI	ACTAGT	1 cut(s)	1246
AjnI	CCWGG	5 cut(s)	434, 787, 1190, 1203, 1594
AjuI	GAANNNNNNNTTGG	2 cut(s)	597, 629
Alw21I	GWGCWC	1 cut(s)	1545
Alw26I	GTCTC	4 cut(s)	1379, 1448, 1550, 1980
AlwI	GGATC	7 cut(s)	447, 533, 572, 585, 1312, 1325, 1841
AoxI	GGCC	5 cut(s)	376, 396, 687, 1308, 1732
ApeKI	GCWGC	5 cut(s)	51, 467, 1291, 1709, 1925
ApoI	RAATTY	6 cut(s)	630, 777, 954, 1058, 1464, 1576
ArsI	GACNNNNNNTTYG	2 cut(s)	964, 996
AseI	ATTAAT	1 cut(s)	117
Asp700I	GAANNNNTTC	1 cut(s)	1185
AspS9I	GGNCC	3 cut(s)	133, 671, 1598
AsuC2I	CCSGG	1 cut(s)	1722
AsuHPI	GGTGA	6 cut(s)	636, 638, 877, 1550, 1772, 1844
AsuII	TTCGAA	4 cut(s)	774, 959, 983, 1158
AvaII	GGWCC	3 cut(s)	133, 671, 1598
BalI	TGGCCA	1 cut(s)	378
BamHI	GGATCC	2 cut(s)	577, 1317
BanI	GGYRCC	2 cut(s)	719, 1430
BanII	GRGCYC	3 cut(s)	1545, 1680, 1987
BarI	GAAGNNNNNNTAC	2 cut(s)	120, 152
BauI	CACGAG	1 cut(s)	1703
Bbv12I	GWGCWC	1 cut(s)	1545
BbvCI	CCTCAGC	1 cut(s)	207
BbvI	GCAGC	5 cut(s)	38, 454, 1278, 1696, 1912
BccI	CCATC	6 cut(s)	169, 540, 707, 1141, 1442, 1666
BceAI	ACGGC	4 cut(s)	373, 745, 1086, 1323
BciT130I	CCWGG	5 cut(s)	436, 789, 1192, 1205, 1596
BciVI	GTATCC	1 cut(s)	829
BclI	TGATCA	2 cut(s)	300, 1023
BcnI	CCSGG	1 cut(s)	1722
BcoDI	GTCTC	4 cut(s)	1379, 1448, 1550, 1980
BcuI	ACTAGT	1 cut(s)	1246
BfaI	CTAG	6 cut(s)	140, 155, 1247, 1427, 1788, 1932
BfmI	CTRYAG	2 cut(s)	532, 1471
BfrI	CTTAAG	1 cut(s)	896
BfuI	GTATCC	1 cut(s)	829
BisI	GCNGC	9 cut(s)	52, 193, 468, 687, 718, 1292, 1710, 1923, 1926
BlsI	GCNGC	9 cut(s)	53, 194, 469, 688, 719, 1293, 1711, 1924, 1927
Bme1390I	CCNGG	6 cut(s)	436, 789, 1192, 1205, 1596, 1722
Bme18I	GGWCC	3 cut(s)	133, 671, 1598
BmgT120I	GGNCC	3 cut(s)	133, 671, 1598
BmiI	GGNNCC	9 cut(s)	579, 721, 1319, 1333, 1417, 1432, 1677, 1718, 1984
BmrFI	CCNGG	6 cut(s)	436, 789, 1192, 1205, 1596, 1722
BmrI	ACTGGG	1 cut(s)	576
BmsI	GCATC	8 cut(s)	355, 741, 852, 1102, 1190, 1270, 1687, 1955
BmuI	ACTGGG	1 cut(s)	576
BpmI	CTGGAG	1 cut(s)	826
Bpu10I	CCTNAGC	1 cut(s)	207
Bpu14I	TTCGAA	4 cut(s)	774, 959, 983, 1158
BpuEI	CTTGAG	2 cut(s)	1121, 1926
BpuMI	CCSGG	1 cut(s)	1722
Bsa29I	ATCGAT	1 cut(s)	1107
BsaBI	GATNNNNATC	1 cut(s)	1845
BsaHI	GRCGYC	1 cut(s)	1660
BsaI	GGTCTC	1 cut(s)	1448
BsaJI	CCNNGG	6 cut(s)	190, 435, 810, 1190, 1720, 1735
BsaWI	WCCGGW	1 cut(s)	673
BsaXI	ACNNNNNCTCC	2 cut(s)	448, 478
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 548, 665, 1196, 1306, 1992
Bse1I	ACTGG	4 cut(s)	499, 582, 941, 1780
Bse8I	GATNNNNATC	1 cut(s)	1845
BseBI	CCWGG	5 cut(s)	436, 789, 1192, 1205, 1596
BseCI	ATCGAT	1 cut(s)	1107
BseDI	CCNNGG	6 cut(s)	190, 435, 810, 1190, 1720, 1735
BseGI	GGATG	1 cut(s)	1205
BseJI	GATNNNNATC	1 cut(s)	1845
BseLI	CCNNNNNNNGG	6 cut(s)	31, 548, 665, 1196, 1306, 1992
BseMII	CTCAG	4 cut(s)	198, 233, 1545, 1926
BseNI	ACTGG	4 cut(s)	499, 582, 941, 1780
BseXI	GCAGC	5 cut(s)	38, 454, 1278, 1696, 1912
BseYI	CCCAGC	1 cut(s)	940
Bsh1236I	CGCG	2 cut(s)	192, 527
BshFI	GGCC	5 cut(s)	378, 398, 689, 1310, 1734
BshNI	GGYRCC	2 cut(s)	719, 1430
BshVI	ATCGAT	1 cut(s)	1107
BsiHKAI	GWGCWC	1 cut(s)	1545
BsiSI	CCGG	2 cut(s)	674, 1722
BslFI	GGGAC	2 cut(s)	48, 1580
BslI	CCNNNNNNNGG	6 cut(s)	31, 548, 665, 1196, 1306, 1992
BsmAI	GTCTC	4 cut(s)	1379, 1448, 1550, 1980
BsmBI	CGTCTC	1 cut(s)	1550
BsmFI	GGGAC	2 cut(s)	48, 1580
BsmI	GAATGC	2 cut(s)	498, 1002
BsnI	GGCC	5 cut(s)	378, 398, 689, 1310, 1734
Bso31I	GGTCTC	1 cut(s)	1448
Bsp119I	TTCGAA	4 cut(s)	774, 959, 983, 1158
Bsp1286I	GDGCHC	3 cut(s)	1545, 1680, 1987
BspANI	GGCC	5 cut(s)	378, 398, 689, 1310, 1734
BspCNI	CTCAG	4 cut(s)	199, 234, 1546, 1925
BspDI	ATCGAT	1 cut(s)	1107
BspFNI	CGCG	2 cut(s)	192, 527
BspHI	TCATGA	3 cut(s)	213, 1026, 1143
BspLI	GGNNCC	9 cut(s)	579, 721, 1319, 1333, 1417, 1432, 1677, 1718, 1984
BspMAI	CTGCAG	1 cut(s)	536
BspPI	GGATC	7 cut(s)	447, 533, 572, 585, 1312, 1325, 1841
BspT104I	TTCGAA	4 cut(s)	774, 959, 983, 1158
BspT107I	GGYRCC	2 cut(s)	719, 1430
BspTI	CTTAAG	1 cut(s)	896
BspTNI	GGTCTC	1 cut(s)	1448
BsrBI	CCGCTC	1 cut(s)	1922
BsrI	ACTGG	4 cut(s)	499, 582, 941, 1780
BssECI	CCNNGG	6 cut(s)	190, 435, 810, 1190, 1720, 1735
BssNAI	GTATAC	1 cut(s)	507
BssNI	GRCGYC	1 cut(s)	1660
BssSI	CACGAG	1 cut(s)	1703
BssT1I	CCWWGG	2 cut(s)	810, 1735
Bst1107I	GTATAC	1 cut(s)	507
Bst2BI	CACGAG	1 cut(s)	1703
Bst2UI	CCWGG	5 cut(s)	436, 789, 1192, 1205, 1596
Bst4CI	ACNGT	4 cut(s)	751, 826, 1411, 1475
Bst6I	CTCTTC	1 cut(s)	75
BstACI	GRCGYC	1 cut(s)	1660
BstAFI	CTTAAG	1 cut(s)	896
BstBI	TTCGAA	4 cut(s)	774, 959, 983, 1158
BstC8I	GCNNGC	2 cut(s)	867, 1785
BstDEI	CTNAG	6 cut(s)	28, 207, 242, 998, 1554, 1912
BstDSI	CCRYGG	1 cut(s)	190
BstF5I	GGATG	1 cut(s)	1205
BstFNI	CGCG	2 cut(s)	192, 527
BstMAI	GTCTC	4 cut(s)	1379, 1448, 1550, 1980
BstMWI	GCNNNNNNNGC	7 cut(s)	51, 473, 692, 1529, 1706, 1913, 1922
BstNI	CCWGG	5 cut(s)	436, 789, 1192, 1205, 1596
BstNSI	RCATGY	1 cut(s)	787
BstSCI	CCNGG	6 cut(s)	434, 787, 1190, 1203, 1594, 1720
BstSFI	CTRYAG	2 cut(s)	532, 1471
BstUI	CGCG	2 cut(s)	192, 527
BstV1I	GCAGC	5 cut(s)	38, 454, 1278, 1696, 1912
BstX2I	RGATCY	3 cut(s)	538, 577, 1317
BstXI	CCANNNNNNTGG	3 cut(s)	829, 1348, 1412
BstYI	RGATCY	3 cut(s)	538, 577, 1317
BstZ17I	GTATAC	1 cut(s)	507
Bsu15I	ATCGAT	1 cut(s)	1107
BsuI	GTATCC	1 cut(s)	829
BsuRI	GGCC	5 cut(s)	378, 398, 689, 1310, 1734
BsuTUI	ATCGAT	1 cut(s)	1107
BtgI	CCRYGG	1 cut(s)	190
BtsCI	GGATG	1 cut(s)	1205
BtsIMutI	CAGTG	4 cut(s)	747, 822, 1480, 1773
Cac8I	GCNNGC	2 cut(s)	867, 1785
CciI	TCATGA	3 cut(s)	213, 1026, 1143
Cfr13I	GGNCC	3 cut(s)	133, 671, 1598
Cfr42I	CCGCGG	1 cut(s)	193
ClaI	ATCGAT	1 cut(s)	1107
CseI	GACGC	3 cut(s)	160, 511, 1649
CsiI	ACCWGGT	1 cut(s)	1594
Csp6I	GTAC	1 cut(s)	223
CviQI	GTAC	1 cut(s)	223
DdeI	CTNAG	6 cut(s)	28, 207, 242, 998, 1554, 1912
DraIII	CACNNNGTG	1 cut(s)	706
EaeI	YGGCCR	2 cut(s)	376, 1308
Eam1104I	CTCTTC	1 cut(s)	75
EarI	CTCTTC	1 cut(s)	75
Ecl136II	GAGCTC	1 cut(s)	1543
Eco130I	CCWWGG	2 cut(s)	810, 1735
Eco24I	GRGCYC	3 cut(s)	1545, 1680, 1987
Eco31I	GGTCTC	1 cut(s)	1448
Eco47I	GGWCC	3 cut(s)	133, 671, 1598
Eco53kI	GAGCTC	1 cut(s)	1543
EcoICRI	GAGCTC	1 cut(s)	1543
EcoO109I	RGGNCCY	1 cut(s)	133
EcoRII	CCWGG	5 cut(s)	434, 787, 1190, 1203, 1594
EcoT14I	CCWWGG	2 cut(s)	810, 1735
EcoT38I	GRGCYC	3 cut(s)	1545, 1680, 1987
ErhI	CCWWGG	2 cut(s)	810, 1735
Esp3I	CGTCTC	1 cut(s)	1550
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FaqI	GGGAC	2 cut(s)	48, 1580
FauI	CCCGC	3 cut(s)	242, 417, 1909
FauNDI	CATATG	1 cut(s)	1619
FbaI	TGATCA	2 cut(s)	300, 1023
FblI	GTMKAC	3 cut(s)	186, 294, 506
Fnu4HI	GCNGC	9 cut(s)	52, 193, 468, 687, 718, 1292, 1710, 1923, 1926
FokI	GGATG	1 cut(s)	1212
FriOI	GRGCYC	3 cut(s)	1545, 1680, 1987
Fsp4HI	GCNGC	9 cut(s)	52, 193, 468, 687, 718, 1292, 1710, 1923, 1926
FspBI	CTAG	6 cut(s)	140, 155, 1247, 1427, 1788, 1932
GluI	GCNGC	9 cut(s)	52, 193, 468, 687, 718, 1292, 1710, 1923, 1926
GsaI	CCCAGC	1 cut(s)	944
GsuI	CTGGAG	1 cut(s)	826
HaeIII	GGCC	5 cut(s)	378, 398, 689, 1310, 1734
HapII	CCGG	2 cut(s)	674, 1722
HgaI	GACGC	3 cut(s)	160, 511, 1649
Hin1I	GRCGYC	1 cut(s)	1660
HincII	GTYRAC	4 cut(s)	295, 949, 1078, 1450
HindII	GTYRAC	4 cut(s)	295, 949, 1078, 1450
HindIII	AAGCTT	1 cut(s)	1781
HpaI	GTTAAC	1 cut(s)	1450
HpaII	CCGG	2 cut(s)	674, 1722
HphI	GGTGA	6 cut(s)	636, 638, 877, 1550, 1772, 1844
Hpy166II	GTNNAC	8 cut(s)	187, 295, 507, 644, 671, 949, 1078, 1450
Hpy188I	TCNGA	8 cut(s)	174, 243, 315, 543, 604, 934, 1602, 1665
Hpy8I	GTNNAC	8 cut(s)	187, 295, 507, 644, 671, 949, 1078, 1450
Hpy99I	CGWCG	2 cut(s)	527, 1693
HpyAV	CCTTC	4 cut(s)	146, 211, 1218, 1724
HpyCH4III	ACNGT	4 cut(s)	751, 826, 1411, 1475
HpyCH4IV	ACGT	2 cut(s)	663, 1502
HpyCH4V	TGCA	9 cut(s)	329, 470, 515, 534, 622, 695, 865, 1115, 1283
HpyF10VI	GCNNNNNNNGC	7 cut(s)	51, 473, 692, 1529, 1706, 1913, 1922
HpyF3I	CTNAG	6 cut(s)	28, 207, 242, 998, 1554, 1912
HpySE526I	ACGT	2 cut(s)	663, 1502
Hsp92I	GRCGYC	1 cut(s)	1660
Ksp22I	TGATCA	2 cut(s)	300, 1023
KspAI	GTTAAC	1 cut(s)	1450
KspI	CCGCGG	1 cut(s)	193
LmnI	GCTCC	8 cut(s)	428, 1548, 1675, 1722, 1821, 1919, 1933, 1982
Lsp1109I	GCAGC	5 cut(s)	38, 454, 1278, 1696, 1912
LweI	GCATC	8 cut(s)	355, 741, 852, 1102, 1190, 1270, 1687, 1955
MabI	ACCWGGT	1 cut(s)	1594
MaeI	CTAG	6 cut(s)	140, 155, 1247, 1427, 1788, 1932
MaeII	ACGT	2 cut(s)	663, 1502
MaeIII	GTNAC	8 cut(s)	321, 557, 566, 1175, 1242, 1498, 1760, 1832
MbiI	CCGCTC	1 cut(s)	1922
MboII	GAAGA	5 cut(s)	89, 92, 170, 397, 1270
MflI	RGATCY	3 cut(s)	538, 577, 1317
MhlI	GDGCHC	3 cut(s)	1545, 1680, 1987
MlsI	TGGCCA	1 cut(s)	378
MluNI	TGGCCA	1 cut(s)	378
MlyI	GAGTC	2 cut(s)	864, 1381
MmeI	TCCRAC	3 cut(s)	400, 1349, 1393
MnlI	CCTC	9 cut(s)	35, 76, 124, 202, 450, 568, 700, 1230, 1862
Mox20I	TGGCCA	1 cut(s)	378
MroXI	GAANNNNTTC	1 cut(s)	1185
MscI	TGGCCA	1 cut(s)	378
MseI	TTAA	6 cut(s)	117, 897, 909, 915, 1449, 2005
MslI	CAYNNNNRTG	3 cut(s)	384, 827, 1025
Msp20I	TGGCCA	1 cut(s)	378
MspA1I	CMGCKG	5 cut(s)	192, 206, 638, 846, 1916
MspCI	CTTAAG	1 cut(s)	896
MspI	CCGG	2 cut(s)	674, 1722
MspR9I	CCNGG	6 cut(s)	436, 789, 1192, 1205, 1596, 1722
Mva1269I	GAATGC	2 cut(s)	498, 1002
MvaI	CCWGG	5 cut(s)	436, 789, 1192, 1205, 1596
MvnI	CGCG	2 cut(s)	192, 527
MwoI	GCNNNNNNNGC	7 cut(s)	51, 473, 692, 1529, 1706, 1913, 1922
NciI	CCSGG	1 cut(s)	1722
NdeI	CATATG	1 cut(s)	1619
NlaIV	GGNNCC	9 cut(s)	579, 721, 1319, 1333, 1417, 1432, 1677, 1718, 1984
NmeAIII	GCCGAG	2 cut(s)	36, 313
NmuCI	GTSAC	5 cut(s)	321, 1242, 1498, 1760, 1832
NspI	RCATGY	1 cut(s)	787
NspV	TTCGAA	4 cut(s)	774, 959, 983, 1158
PagI	TCATGA	3 cut(s)	213, 1026, 1143
PcsI	WCGNNNNNNNCGW	2 cut(s)	735, 980
PctI	GAATGC	2 cut(s)	498, 1002
PdmI	GAANNNNTTC	1 cut(s)	1185
PfeI	GAWTC	8 cut(s)	342, 961, 1030, 1084, 1089, 1571, 1740, 1770
PkrI	GCNGC	9 cut(s)	53, 194, 469, 688, 719, 1293, 1711, 1924, 1927
PleI	GAGTC	2 cut(s)	863, 1380
PpsI	GAGTC	2 cut(s)	863, 1380
PpuMI	RGGWCCY	1 cut(s)	133
PshBI	ATTAAT	1 cut(s)	117
PsiI	TTATAA	1 cut(s)	1610
Psp124BI	GAGCTC	1 cut(s)	1545
Psp5II	RGGWCCY	1 cut(s)	133
Psp6I	CCWGG	5 cut(s)	434, 787, 1190, 1203, 1594
PspFI	CCCAGC	1 cut(s)	940
PspGI	CCWGG	5 cut(s)	434, 787, 1190, 1203, 1594
PspN4I	GGNNCC	9 cut(s)	579, 721, 1319, 1333, 1417, 1432, 1677, 1718, 1984
PspPI	GGNCC	3 cut(s)	133, 671, 1598
PspPPI	RGGWCCY	1 cut(s)	133
PsrI	GAACNNNNNNTAC	2 cut(s)	259, 291
PstI	CTGCAG	1 cut(s)	536
PsuI	RGATCY	3 cut(s)	538, 577, 1317
PvuII	CAGCTG	3 cut(s)	206, 638, 846
RsaI	GTAC	1 cut(s)	224
RsaNI	GTAC	1 cut(s)	223
RseI	CAYNNNNRTG	3 cut(s)	384, 827, 1025
SacI	GAGCTC	1 cut(s)	1545
SacII	CCGCGG	1 cut(s)	193
SalI	GTCGAC	1 cut(s)	293
SaqAI	TTAA	6 cut(s)	117, 897, 909, 915, 1449, 2005
SatI	GCNGC	9 cut(s)	52, 193, 468, 687, 718, 1292, 1710, 1923, 1926
Sau96I	GGNCC	3 cut(s)	133, 671, 1598
SchI	GAGTC	2 cut(s)	864, 1381
ScrFI	CCNGG	6 cut(s)	436, 789, 1192, 1205, 1596, 1722
SduI	GDGCHC	3 cut(s)	1545, 1680, 1987
SexAI	ACCWGGT	1 cut(s)	1594
SfaNI	GCATC	8 cut(s)	355, 741, 852, 1102, 1190, 1270, 1687, 1955
SfcI	CTRYAG	2 cut(s)	532, 1471
Sfr303I	CCGCGG	1 cut(s)	193
SfuI	TTCGAA	4 cut(s)	774, 959, 983, 1158
SgrBI	CCGCGG	1 cut(s)	193
SinI	GGWCC	3 cut(s)	133, 671, 1598
SmiMI	CAYNNNNRTG	3 cut(s)	384, 827, 1025
SmlI	CTYRAG	3 cut(s)	896, 1136, 1941
SmoI	CTYRAG	3 cut(s)	896, 1136, 1941
SpeI	ACTAGT	1 cut(s)	1246
SspMI	CTAG	6 cut(s)	140, 155, 1247, 1427, 1788, 1932
SstI	GAGCTC	1 cut(s)	1545
StyD4I	CCNGG	6 cut(s)	434, 787, 1190, 1203, 1594, 1720
StyI	CCWWGG	2 cut(s)	810, 1735
TaaI	ACNGT	4 cut(s)	751, 826, 1411, 1475
TaiI	ACGT	2 cut(s)	666, 1505
TaqII	GACCGA	1 cut(s)	158
TatI	WGTACW	1 cut(s)	222
TauI	GCSGC	4 cut(s)	195, 689, 720, 1925
TfiI	GAWTC	8 cut(s)	342, 961, 1030, 1084, 1089, 1571, 1740, 1770
Tru1I	TTAA	6 cut(s)	117, 897, 909, 915, 1449, 2005
Tru9I	TTAA	6 cut(s)	117, 897, 909, 915, 1449, 2005
TscAI	CASTG	4 cut(s)	754, 829, 1480, 1780
TseFI	GTSAC	5 cut(s)	321, 1242, 1498, 1760, 1832
TseI	GCWGC	5 cut(s)	51, 467, 1291, 1709, 1925
Tsp45I	GTSAC	5 cut(s)	321, 1242, 1498, 1760, 1832
TspDTI	ATGAA	7 cut(s)	6, 104, 230, 362, 891, 1132, 1838
TspGWI	ACGGA	1 cut(s)	867
TspRI	CASTG	4 cut(s)	754, 829, 1480, 1780
Vha464I	CTTAAG	1 cut(s)	896
VpaK11BI	GGWCC	3 cut(s)	133, 671, 1598
VspI	ATTAAT	1 cut(s)	117
XapI	RAATTY	6 cut(s)	630, 777, 954, 1058, 1464, 1576
XceI	RCATGY	1 cut(s)	787
XmiI	GTMKAC	3 cut(s)	186, 294, 506
XmnI	GAANNNNTTC	1 cut(s)	1185
XspI	CTAG	6 cut(s)	140, 155, 1247, 1427, 1788, 1932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.