Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000924

Physical Location & Seq

Genomic Coordinates Reverse (-)

60674747 .. 60678433

Gene Structure 3687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG349100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGCAGAAGCAGACTATGACTATCTATAAATGTCGCCTCTGTCATACCCCTTCTTCACATCCCAACTTCACATTCTTCACACATTCTCTCTGCTCTAGCAACTGTGAAATGGCTAGAATTCTCATCTTCTTCATGGAGCTTGTTCTATTATGCTTATGCATAGCAACAATGACGACGAAGGCAGAAGCAGAATGCATGATATATAAGGACCGCAACCAACCCTTAAATACTAGAATCAATGACCTACTGAGCCGGATGACCTTGGAGGAAAAGATTGGCCAAATGACGCAGATAGACCGCAGTGTTGCTTCACCTGAGGTGATGTACAAGTACAAGATTGGGAGTGTTTTGAGTGGGGGTGGGAGTGTGCCAGCAAAAAAGGCTTCTGCAGAAACTTGGATTAGAATGGTGAATGATTTTCAAAACGGATCTTTATCAACTCGGCTTGCTATTCCACTGATTTATGGTATTGATGCTATTCATGGCCACAACAATGTCTACAAGGCGACAATCTTTCCTCACAATATTGGACTGGGAGCTACCAGGGACCCTGAACTTGTTAAGAGGATTGGAGCTGCAACCGCTCTTGAAGTTAGAGCTACAGGAATCCATTATACCTTTGCACCTTGTGTAGCGGTTTGTAGAGATCCAAGATGGGGTCGTTGTTACGAAAGCTACAGTGAAGATCCTAAGCTTGTTCAAGCAATGACTGAGATCATACCTGGATTACAAGGAGAGATATCAGCTAACTCTAGAAAGGGTGTTCCCTATGTAGCAGGAAACGATAAGGTTGCAGCTTGTGCAAAGCATTATGTGGGAGATGGTGGAACAATCATGGGCATCAATGAGAATAACACTGTGATAGATAGACATGGTTTACTGAGCATTCACATGCCACCCTACCCCAGTGCAATTATCAAGGGTGTTGCAACCATTATGGTATCTTACTCGAGCTGGAATGGAGTAAAGATGCATGCTAATCGTGAACTTATCACCGACTTCCTTAAGGGTACCCTCGGTTTCCAGGGTATTGTCATCTCAGATTGGCAGGGTATTGACATGATCACCTCTCCCCCTAATGCCAATTACTCATACTCAATTATGAAAGGAATCAGTGCTGGCATTGATATGATCATGGTTCCATACAACTATACAGAATTCATCAAGGATCTAACTTTCCATGTGAAAAATAAAATCATCCCCATGAGCAGAATTGACGATGCTGTGAAGAGAATTTTGCGGGTTAAGTTTACAATGGGGCTATTTGAGAAACCGTTGGCTGATCTCAGACTGGTCAACCAGCTTGGCAGTCAGGAACATAGAGAATTGGCTAGGGAAGCAGTGAGGCGATCACTAGTGCTTCTAAAGAATGGTGAATCTGCTGAGAAGCCATTGCTACCCCTTCCCAAGAAGACATCAAAAATTCTTGTAGCTGGAAGTCATGCAGATAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGAGTGGCAGGGACTAAGTGGCAACAACCTCACACAAGGTACCACAATTCTAACTGCCATAAGGAACACAGTTGCACCTGAAACCAAAGTAGTGTACAAGGAGAATCCTGATGCCAAGTTTGTGAAGTCAAATAACTTCTCCCATGCCATCGTTATGGTAGGAGAGCCACCCTATGCCGAGGGAGCTGGTGACAACCTAAACTTAACAATCCCTAAATCTGGCCGAAGAGTCATCAGAAATGTTTGCGGTGCAGCAAAATGTGTTGTTTGCCTCATCACCGGCCGTCCTGTAGTGATCAAACCATATCTTTCCATCATAGATACTCTTGTTGCAGCTTGGCTTCCAGGGACTGAAGGCCAAGGAGTTGCTGATGTTTTGTTTGGTGACTATGGCTTCAATGGCAAGCTTCCTCGCACCTGGTTCAGAACCGCTCATCAGCTGCCTATGAATGTTGGAGATCCACATTATGATCCTCTCTTCCCTTATGGATATGGCCTCACTACACAACCCACCAAAGCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005623 GO:0005886 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009057 GO:0009251 GO:0015926 GO:0016020 GO:0016052 GO:0016787 GO:0016798 GO:0042597 GO:0043170 GO:0044042 GO:0044238 GO:0044464 GO:0071704 GO:0071944 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

668

Amino Acids

73.63

Weight (kDa)

9.03

Isoelectric Point (pI)

31.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	87 - 415	2.8e-73	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	452 - 661	5.3e-37	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04885 AT5G04885 AT5G04885
fragaria_vesca	FvH4_1g28352 FvH4_1g28352 FvH4_1g28352 FvH4_4g26180 FvH4_4g26180 FvH4_7g05220 FvH4_7g05220
malus_domestica	MD02G1259600.v1.1 MD07G1060900.v1.1 MD11G1177800.v1.1 MD11G1177900.v1.1 MD14G1004200.v1.1
prunus_persica	Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.2G065700_v2.0.a1 Prupe.6G150000_v2.0.a1 Prupe.6G150200_v2.0.a1 Prupe.6G150400_v2.0.a1 Prupe.6G150500_v2.0.a1 Prupe.7G007200_v2.0.a1
pyrus_communis	pycom14g00250
rosa_chinensis	RchiOBHm_Chr1g0331601 RchiOBHm_Chr3g0496681 RchiOBHm_Chr3g0496721 RchiOBHm_Chr4g0433771
rosa_laevigata	RLG00000006732 RLG00000022510 RLG00000022511 RLG00000029727 RLG00000034619
rosa_multiflora	Rmu_sc0005044.1_g000017 Rmu_sc0006176.1_g000006
rosa_roxburghii	Rroxscaffold_4G00319030 Rroxscaffold_5G00375200 Rroxscaffold_6G00388790 Rroxscaffold_6G00388830 Rroxscaffold_6G00388850
rosa_rugosa	Rorug01G0095000 Rorug01G0095100 Rorug01G0095200 Rorug03G0185800 Rorug03G0186000 Rorug03G0285500 Rorug03G0285700 Rorug04G0271300 Rorug05G0248600 Rorug06G0034700
rosa_samantha	Rh1AG118800 Rh1CG113800 Rh3AG330600 Rh3BG366600 Rh3CG363300 Rh3CG363500 Rh4AG326000 Rh4CG349100 Rh5AG325000
rosa_wichuraiana	Rw1G009560 Rw3G028940 Rw3G028950

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1010, 1520
AccB1I	GGYRCC	2 cut(s)	1010, 1520
AccB7I	CCANNNNNTGG	1 cut(s)	1485
AccBSI	CCGCTC	2 cut(s)	584, 1913
AccI	GTMKAC	1 cut(s)	498
AciI	CCGC	7 cut(s)	211, 298, 582, 635, 1240, 1728, 1911
AclWI	GGATC	6 cut(s)	436, 641, 680, 1176, 1934, 1946
AcoI	YGGCCR	4 cut(s)	277, 484, 1702, 1762
AcsI	RAATTY	4 cut(s)	117, 1157, 1233, 1422
AcuI	CTGAAG	1 cut(s)	1854
AdeI	CACNNNGTG	1 cut(s)	629
AfaI	GTAC	5 cut(s)	326, 332, 1012, 1522, 1577
AfiI	CCNNNNNNNGG	3 cut(s)	656, 1485, 1700
AflII	CTTAAG	1 cut(s)	1004
AgsI	TTSAA	4 cut(s)	422, 590, 701, 1879
AhlI	ACTAGT	1 cut(s)	1354
AjnI	CCWGG	5 cut(s)	542, 721, 1023, 1825, 1898
AjuI	GAANNNNNNNTTGG	2 cut(s)	56, 88
AlwI	GGATC	6 cut(s)	436, 641, 680, 1176, 1934, 1946
AlwNI	CAGNNNCTG	1 cut(s)	1832
Ama87I	CYCGRG	1 cut(s)	949
AoxI	GGCC	6 cut(s)	277, 484, 1702, 1762, 1837, 1975
ApeKI	GCWGC	5 cut(s)	575, 794, 1733, 1814, 1921
ApoI	RAATTY	4 cut(s)	117, 1157, 1233, 1422
Asp718I	GGTACC	2 cut(s)	1010, 1520
AspS9I	GGNCC	3 cut(s)	208, 547, 1476
AsuHPI	GGTGA	9 cut(s)	303, 331, 421, 985, 1057, 1385, 1682, 1750, 1877
AvaI	CYCGRG	1 cut(s)	949
AvaII	GGWCC	3 cut(s)	208, 547, 1476
AxyI	CCTNAGG	1 cut(s)	315
BaeI	ACNNNNGTAYC	2 cut(s)	1794, 1827
BalI	TGGCCA	2 cut(s)	279, 486
BanI	GGYRCC	2 cut(s)	1010, 1520
BbsI	GAAGAC	1 cut(s)	1418
BbvI	GCAGC	5 cut(s)	562, 806, 1745, 1826, 1908
BccI	CCATC	4 cut(s)	648, 815, 1637, 1802
BceAI	ACGGC	1 cut(s)	1749
BcgI	CGANNNNNNTGC	4 cut(s)	773, 807, 962, 996
BciT130I	CCWGG	5 cut(s)	544, 723, 1025, 1827, 1900
BclI	TGATCA	3 cut(s)	1062, 1131, 1776
BcuI	ACTAGT	1 cut(s)	1354
BfaI	CTAG	7 cut(s)	96, 114, 231, 753, 1332, 1355, 2005
BfmI	CTRYAG	4 cut(s)	387, 600, 676, 1770
BfrI	CTTAAG	1 cut(s)	1004
BisI	GCNGC	5 cut(s)	576, 795, 1734, 1815, 1922
BlsI	GCNGC	5 cut(s)	577, 796, 1735, 1816, 1923
Bme1390I	CCNGG	5 cut(s)	544, 723, 1025, 1827, 1900
Bme18I	GGWCC	3 cut(s)	208, 547, 1476
BmeT110I	CYCGRG	1 cut(s)	949
BmgT120I	GGNCC	3 cut(s)	208, 547, 1476
BmiI	GGNNCC	5 cut(s)	548, 549, 1012, 1140, 1522
BmrFI	CCNGG	5 cut(s)	544, 723, 1025, 1827, 1900
BmrI	ACTGGG	2 cut(s)	542, 900
BmsI	GCATC	5 cut(s)	463, 849, 960, 1210, 1582
BmuI	ACTGGG	2 cut(s)	542, 900
BpiI	GAAGAC	1 cut(s)	1418
Bpu10I	CCTNAGC	1 cut(s)	690
BsaBI	GATNNNNATC	1 cut(s)	433
BsaJI	CCNNGG	7 cut(s)	261, 543, 1015, 1024, 1659, 1826, 1840
Bsc4I	CCNNNNNNNGG	3 cut(s)	656, 1485, 1700
Bse118I	RCCGGY	1 cut(s)	1760
Bse1I	ACTGG	3 cut(s)	537, 906, 1296
Bse21I	CCTNAGG	1 cut(s)	315
Bse3DI	GCAATG	2 cut(s)	711, 1391
Bse8I	GATNNNNATC	1 cut(s)	433
BseBI	CCWGG	5 cut(s)	544, 723, 1025, 1827, 1900
BseDI	CCNNGG	7 cut(s)	261, 543, 1015, 1024, 1659, 1826, 1840
BseGI	GGATG	3 cut(s)	58, 261, 1197
BseJI	GATNNNNATC	1 cut(s)	433
BseLI	CCNNNNNNNGG	3 cut(s)	656, 1485, 1700
BseMI	GCAATG	2 cut(s)	711, 1391
BseMII	CTCAG	7 cut(s)	239, 306, 702, 872, 1053, 1300, 1374
BseNI	ACTGG	3 cut(s)	537, 906, 1296
BseX3I	CGGCCG	1 cut(s)	1762
BseXI	GCAGC	5 cut(s)	562, 806, 1745, 1826, 1908
BsgI	GTGCAG	1 cut(s)	1752
Bsh1285I	CGRYCG	1 cut(s)	1765
BshFI	GGCC	6 cut(s)	279, 486, 1704, 1764, 1839, 1977
BshNI	GGYRCC	2 cut(s)	1010, 1520
BsiEI	CGRYCG	1 cut(s)	1765
BsiHKCI	CYCGRG	1 cut(s)	949
BsiSI	CCGG	2 cut(s)	253, 1761
BslFI	GGGAC	3 cut(s)	560, 1506, 1843
BslI	CCNNNNNNNGG	3 cut(s)	656, 1485, 1700
BsmFI	GGGAC	3 cut(s)	560, 1506, 1843
BsmI	GAATGC	2 cut(s)	197, 885
BsnI	GGCC	6 cut(s)	279, 486, 1704, 1764, 1839, 1977
BsoBI	CYCGRG	1 cut(s)	949
Bsp1407I	TGTACA	2 cut(s)	324, 1575
BspACI	CCGC	7 cut(s)	211, 298, 582, 635, 1240, 1728, 1911
BspANI	GGCC	6 cut(s)	279, 486, 1704, 1764, 1839, 1977
BspCNI	CTCAG	7 cut(s)	240, 307, 703, 873, 1052, 1299, 1375
BspLI	GGNNCC	5 cut(s)	548, 549, 1012, 1140, 1522
BspMAI	CTGCAG	1 cut(s)	391
BspPI	GGATC	6 cut(s)	436, 641, 680, 1176, 1934, 1946
BspT107I	GGYRCC	2 cut(s)	1010, 1520
BspTI	CTTAAG	1 cut(s)	1004
BsrBI	CCGCTC	2 cut(s)	584, 1913
BsrDI	GCAATG	2 cut(s)	711, 1391
BsrFI	RCCGGY	1 cut(s)	1760
BsrGI	TGTACA	2 cut(s)	324, 1575
BsrI	ACTGG	3 cut(s)	537, 906, 1296
BssAI	RCCGGY	1 cut(s)	1760
BssECI	CCNNGG	7 cut(s)	261, 543, 1015, 1024, 1659, 1826, 1840
BssT1I	CCWWGG	2 cut(s)	261, 1840
Bst2UI	CCWGG	5 cut(s)	544, 723, 1025, 1827, 1900
Bst4CI	ACNGT	5 cut(s)	104, 680, 859, 1275, 1552
Bst6I	CTCTTC	3 cut(s)	1223, 1702, 1964
BstAFI	CTTAAG	1 cut(s)	1004
BstAPI	GCANNNNNTGC	1 cut(s)	800
BstAUI	TGTACA	2 cut(s)	324, 1575
BstC8I	GCNNGC	5 cut(s)	372, 447, 975, 1120, 1886
BstDEI	CTNAG	9 cut(s)	248, 315, 690, 711, 881, 1039, 1286, 1383, 1496
BstF5I	GGATG	3 cut(s)	58, 261, 1197
BstMCI	CGRYCG	1 cut(s)	1765
BstMWI	GCNNNNNNNGC	6 cut(s)	380, 581, 800, 1337, 1664, 1881
BstNI	CCWGG	5 cut(s)	544, 723, 1025, 1827, 1900
BstNSI	RCATGY	2 cut(s)	895, 977
BstSCI	CCNGG	5 cut(s)	542, 721, 1023, 1825, 1898
BstSFI	CTRYAG	4 cut(s)	387, 600, 676, 1770
BstV1I	GCAGC	5 cut(s)	562, 806, 1745, 1826, 1908
BstV2I	GAAGAC	1 cut(s)	1418
BstX2I	RGATCY	5 cut(s)	428, 646, 685, 1168, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1636
BstYI	RGATCY	5 cut(s)	428, 646, 685, 1168, 1939
BstZI	CGGCCG	1 cut(s)	1762
Bsu36I	CCTNAGG	1 cut(s)	315
BsuRI	GGCC	6 cut(s)	279, 486, 1704, 1764, 1839, 1977
BtsCI	GGATG	3 cut(s)	58, 261, 1197
BtsI	GCAGTG	2 cut(s)	307, 1347
BtsIMutI	CAGTG	8 cut(s)	307, 455, 685, 855, 913, 1120, 1347, 1469
Cac8I	GCNNGC	5 cut(s)	372, 447, 975, 1120, 1886
CaiI	CAGNNNCTG	1 cut(s)	1832
Cfr10I	RCCGGY	1 cut(s)	1760
Cfr13I	GGNCC	3 cut(s)	208, 547, 1476
CseI	GACGC	1 cut(s)	295
CsiI	ACCWGGT	1 cut(s)	1898
Csp6I	GTAC	5 cut(s)	325, 331, 1011, 1521, 1576
CviQI	GTAC	5 cut(s)	325, 331, 1011, 1521, 1576
DdeI	CTNAG	9 cut(s)	248, 315, 690, 711, 881, 1039, 1286, 1383, 1496
DraIII	CACNNNGTG	1 cut(s)	629
EaeI	YGGCCR	4 cut(s)	277, 484, 1702, 1762
EagI	CGGCCG	1 cut(s)	1762
Eam1104I	CTCTTC	3 cut(s)	1223, 1702, 1964
EarI	CTCTTC	3 cut(s)	1223, 1702, 1964
EclXI	CGGCCG	1 cut(s)	1762
Eco130I	CCWWGG	2 cut(s)	261, 1840
Eco32I	GATATC	1 cut(s)	741
Eco47I	GGWCC	3 cut(s)	208, 547, 1476
Eco52I	CGGCCG	1 cut(s)	1762
Eco57I	CTGAAG	1 cut(s)	1854
Eco81I	CCTNAGG	1 cut(s)	315
Eco88I	CYCGRG	1 cut(s)	949
EcoO109I	RGGNCCY	1 cut(s)	547
EcoRI	GAATTC	2 cut(s)	117, 1157
EcoRII	CCWGG	5 cut(s)	542, 721, 1023, 1825, 1898
EcoRV	GATATC	1 cut(s)	741
EcoT14I	CCWWGG	2 cut(s)	261, 1840
EcoT22I	ATGCAT	3 cut(s)	161, 197, 975
ErhI	CCWWGG	2 cut(s)	261, 1840
FaqI	GGGAC	3 cut(s)	560, 1506, 1843
FauI	CCCGC	1 cut(s)	1233
FbaI	TGATCA	3 cut(s)	1062, 1131, 1776
FblI	GTMKAC	1 cut(s)	498
Fnu4HI	GCNGC	5 cut(s)	576, 795, 1734, 1815, 1922
FokI	GGATG	3 cut(s)	45, 268, 1184
Fsp4HI	GCNGC	5 cut(s)	576, 795, 1734, 1815, 1922
FspBI	CTAG	7 cut(s)	96, 114, 231, 753, 1332, 1355, 2005
GluI	GCNGC	5 cut(s)	576, 795, 1734, 1815, 1922
HaeIII	GGCC	6 cut(s)	279, 486, 1704, 1764, 1839, 1977
HapII	CCGG	2 cut(s)	253, 1761
HgaI	GACGC	1 cut(s)	295
HincII	GTYRAC	1 cut(s)	1297
HindII	GTYRAC	1 cut(s)	1297
HindIII	AAGCTT	2 cut(s)	692, 1886
HinfI	GANTC	6 cut(s)	234, 606, 1110, 1376, 1585, 1710
HpaII	CCGG	2 cut(s)	253, 1761
HphI	GGTGA	9 cut(s)	303, 331, 421, 985, 1057, 1385, 1682, 1750, 1877
Hpy166II	GTNNAC	6 cut(s)	499, 878, 986, 1251, 1297, 1576
Hpy188I	TCNGA	4 cut(s)	1042, 1289, 1718, 1907
Hpy188III	TCNNGA	5 cut(s)	587, 753, 983, 1313, 1589
Hpy8I	GTNNAC	6 cut(s)	499, 878, 986, 1251, 1297, 1576
Hpy99I	CGWCG	1 cut(s)	178
HpyAV	CCTTC	4 cut(s)	60, 172, 1412, 1829
HpyCH4III	ACNGT	5 cut(s)	104, 680, 859, 1275, 1552
HpyF10VI	GCNNNNNNNGC	6 cut(s)	380, 581, 800, 1337, 1664, 1881
HpyF3I	CTNAG	9 cut(s)	248, 315, 690, 711, 881, 1039, 1286, 1383, 1496
KflI	GGGWCCC	1 cut(s)	547
KpnI	GGTACC	2 cut(s)	1014, 1524
Ksp22I	TGATCA	3 cut(s)	1062, 1131, 1776
LmnI	GCTCC	4 cut(s)	136, 536, 572, 1664
Lsp1109I	GCAGC	5 cut(s)	562, 806, 1745, 1826, 1908
LweI	GCATC	5 cut(s)	463, 849, 960, 1210, 1582
MabI	ACCWGGT	1 cut(s)	1898
MaeI	CTAG	7 cut(s)	96, 114, 231, 753, 1332, 1355, 2005
MaeIII	GTNAC	3 cut(s)	665, 1670, 1865
MbiI	CCGCTC	2 cut(s)	584, 1913
MboII	GAAGA	9 cut(s)	45, 67, 118, 121, 695, 1240, 1423, 1719, 1951
MflI	RGATCY	5 cut(s)	428, 646, 685, 1168, 1939
MlsI	TGGCCA	2 cut(s)	279, 486
MluNI	TGGCCA	2 cut(s)	279, 486
MlyI	GAGTC	1 cut(s)	1719
MmeI	TCCRAC	2 cut(s)	1454, 1915
Mox20I	TGGCCA	2 cut(s)	279, 486
Mph1103I	ATGCAT	3 cut(s)	161, 197, 975
MscI	TGGCCA	2 cut(s)	279, 486
MseI	TTAA	5 cut(s)	224, 561, 1005, 1245, 1685
MslI	CAYNNNNRTG	5 cut(s)	492, 890, 1127, 1202, 1634
Msp20I	TGGCCA	2 cut(s)	279, 486
MspA1I	CMGCKG	1 cut(s)	1921
MspCI	CTTAAG	1 cut(s)	1004
MspI	CCGG	2 cut(s)	253, 1761
MspR9I	CCNGG	5 cut(s)	544, 723, 1025, 1827, 1900
Mva1269I	GAATGC	2 cut(s)	197, 885
MvaI	CCWGG	5 cut(s)	544, 723, 1025, 1827, 1900
MwoI	GCNNNNNNNGC	6 cut(s)	380, 581, 800, 1337, 1664, 1881
NlaIV	GGNNCC	5 cut(s)	548, 549, 1012, 1140, 1522
NmeAIII	GCCGAG	2 cut(s)	421, 1684
NmuCI	GTSAC	2 cut(s)	1670, 1865
NsiI	ATGCAT	3 cut(s)	161, 197, 975
NspI	RCATGY	2 cut(s)	895, 977
PaeI	GCATGC	1 cut(s)	977
PaeR7I	CTCGAG	1 cut(s)	949
PctI	GAATGC	2 cut(s)	197, 885
PfeI	GAWTC	5 cut(s)	234, 606, 1110, 1376, 1585
PflMI	CCANNNNNTGG	1 cut(s)	1485
PkrI	GCNGC	5 cut(s)	577, 796, 1735, 1816, 1923
PleI	GAGTC	1 cut(s)	1718
PpsI	GAGTC	1 cut(s)	1718
PpuMI	RGGWCCY	1 cut(s)	547
Psp5II	RGGWCCY	1 cut(s)	547
Psp6I	CCWGG	5 cut(s)	542, 721, 1023, 1825, 1898
PspGI	CCWGG	5 cut(s)	542, 721, 1023, 1825, 1898
PspN4I	GGNNCC	5 cut(s)	548, 549, 1012, 1140, 1522
PspPI	GGNCC	3 cut(s)	208, 547, 1476
PspPPI	RGGWCCY	1 cut(s)	547
PspXI	VCTCGAGB	1 cut(s)	949
PstI	CTGCAG	1 cut(s)	391
PstNI	CAGNNNCTG	1 cut(s)	1832
PsuI	RGATCY	5 cut(s)	428, 646, 685, 1168, 1939
PvuII	CAGCTG	1 cut(s)	1921
RsaI	GTAC	5 cut(s)	326, 332, 1012, 1522, 1577
RsaNI	GTAC	5 cut(s)	325, 331, 1011, 1521, 1576
RseI	CAYNNNNRTG	5 cut(s)	492, 890, 1127, 1202, 1634
SaqAI	TTAA	5 cut(s)	224, 561, 1005, 1245, 1685
SatI	GCNGC	5 cut(s)	576, 795, 1734, 1815, 1922
Sau96I	GGNCC	3 cut(s)	208, 547, 1476
SchI	GAGTC	1 cut(s)	1719
ScrFI	CCNGG	5 cut(s)	544, 723, 1025, 1827, 1900
SexAI	ACCWGGT	1 cut(s)	1898
SfaNI	GCATC	5 cut(s)	463, 849, 960, 1210, 1582
SfcI	CTRYAG	4 cut(s)	387, 600, 676, 1770
Sfr274I	CTCGAG	1 cut(s)	949
SinI	GGWCC	3 cut(s)	208, 547, 1476
SlaI	CTCGAG	1 cut(s)	949
SmiMI	CAYNNNNRTG	5 cut(s)	492, 890, 1127, 1202, 1634
SmlI	CTYRAG	2 cut(s)	949, 1004
SmoI	CTYRAG	2 cut(s)	949, 1004
SpeI	ACTAGT	1 cut(s)	1354
SphI	GCATGC	1 cut(s)	977
SsiI	CCGC	7 cut(s)	211, 298, 582, 635, 1240, 1728, 1911
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	7 cut(s)	96, 114, 231, 753, 1332, 1355, 2005
StyD4I	CCNGG	5 cut(s)	542, 721, 1023, 1825, 1898
StyI	CCWWGG	2 cut(s)	261, 1840
TaaI	ACNGT	5 cut(s)	104, 680, 859, 1275, 1552
TaqI	TCGA	1 cut(s)	950
TatI	WGTACW	3 cut(s)	324, 330, 1575
TfiI	GAWTC	5 cut(s)	234, 606, 1110, 1376, 1585
Tru1I	TTAA	5 cut(s)	224, 561, 1005, 1245, 1685
Tru9I	TTAA	5 cut(s)	224, 561, 1005, 1245, 1685
TscAI	CASTG	8 cut(s)	307, 462, 685, 862, 913, 1120, 1347, 1469
TseFI	GTSAC	2 cut(s)	1670, 1865
TseI	GCWGC	5 cut(s)	575, 794, 1733, 1814, 1921
Tsp45I	GTSAC	2 cut(s)	1670, 1865
TspDTI	ATGAA	5 cut(s)	121, 470, 1118, 1150, 1943
TspGWI	ACGGA	1 cut(s)	441
TspRI	CASTG	8 cut(s)	307, 462, 685, 862, 913, 1120, 1347, 1469
Van91I	CCANNNNNTGG	1 cut(s)	1485
Vha464I	CTTAAG	1 cut(s)	1004
VpaK11BI	GGWCC	3 cut(s)	208, 547, 1476
XapI	RAATTY	4 cut(s)	117, 1157, 1233, 1422
XbaI	TCTAGA	1 cut(s)	752
XceI	RCATGY	2 cut(s)	895, 977
XhoI	CTCGAG	1 cut(s)	949
XmiI	GTMKAC	1 cut(s)	498
XspI	CTAG	7 cut(s)	96, 114, 231, 753, 1332, 1355, 2005
Zsp2I	ATGCAT	3 cut(s)	161, 197, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.