XRN 5'-3' exonuclease N-terminus
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75660 AT5G42540 AT5G42540 |
| fragaria_vesca | FvH4_2g38700 FvH4_2g38700 FvH4_5g21470 |
| malus_domestica | MD00G1128500.v1.1 MD08G1014700.v1.1 MD15G1014000.v1.1 |
| prunus_persica | Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 |
| pyrus_communis | pycom08g01310 pycom15g01210 |
| rosa_chinensis | RchiOBHm_Chr5g0009961 RchiOBHm_Chr6g0302611 |
| rosa_laevigata | RLG00000011157 RLG00000031714 |
| rosa_multiflora | Rmu_sc0027322.1_g000001 Rmu_sc0027323.1_g000001 Rmu_sc0039467.1_g000001 Rmu_sc0039989.1_g000001 Rmu_sc0041627.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00066230 Rroxscaffold_7G00165520 |
| rosa_rugosa | Rorug04G0447300 Rorug06G0315300 Rorug06G0315400 |
| rosa_samantha | Rh5AG078800 Rh5BG073500 Rh5CG086100 Rh5DG074200 Rh5DG336700 Rh6AG428700 Rh6BG473800 Rh6CG441000 Rh6DG427700 |
| rosa_wichuraiana | Rw6G037100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 669, 2483 |
| AarI | CACCTGC | 1 cut(s) | 2914 |
| Acc16I | TGCGCA | 1 cut(s) | 2034 |
| Acc36I | ACCTGC | 1 cut(s) | 2914 |
| AccB1I | GGYRCC | 1 cut(s) | 819 |
| AciI | CCGC | 5 cut(s) | 93, 96, 412, 991, 1519 |
| AclWI | GGATC | 3 cut(s) | 554, 2518, 2650 |
| AcoI | YGGCCR | 1 cut(s) | 729 |
| AcsI | RAATTY | 5 cut(s) | 553, 741, 982, 1613, 2064 |
| AcuI | CTGAAG | 3 cut(s) | 222, 405, 417 |
| AcyI | GRCGYC | 2 cut(s) | 99, 705 |
| AfaI | GTAC | 4 cut(s) | 1103, 1233, 1673, 2152 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 614, 763, 1731, 2898 |
| AflII | CTTAAG | 2 cut(s) | 1159, 1505 |
| AjnI | CCWGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| Alw21I | GWGCWC | 4 cut(s) | 1228, 1867, 2470, 3022 |
| Alw44I | GTGCAC | 1 cut(s) | 1863 |
| AlwI | GGATC | 3 cut(s) | 554, 2518, 2650 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 395, 1840 |
| Ama87I | CYCGRG | 2 cut(s) | 1061, 2865 |
| AoxI | GGCC | 3 cut(s) | 729, 1185, 1777 |
| ApaLI | GTGCAC | 1 cut(s) | 1863 |
| ApoI | RAATTY | 5 cut(s) | 553, 741, 982, 1613, 2064 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2081, 2113 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 237, 1037, 1254, 2064 |
| AspLEI | GCGC | 1 cut(s) | 2035 |
| AspS9I | GGNCC | 2 cut(s) | 988, 1777 |
| AsuHPI | GGTGA | 5 cut(s) | 910, 1377, 1541, 2135, 2938 |
| AsuII | TTCGAA | 1 cut(s) | 2068 |
| AvaI | CYCGRG | 2 cut(s) | 1061, 2865 |
| AvaII | GGWCC | 1 cut(s) | 988 |
| BaeGI | GKGCMC | 2 cut(s) | 822, 1867 |
| BalI | TGGCCA | 1 cut(s) | 731 |
| BanI | GGYRCC | 1 cut(s) | 819 |
| BanII | GRGCYC | 2 cut(s) | 2470, 3022 |
| BauI | CACGAG | 3 cut(s) | 1272, 1284, 1296 |
| BbsI | GAAGAC | 5 cut(s) | 210, 863, 1494, 2009, 2426 |
| Bbv12I | GWGCWC | 4 cut(s) | 1228, 1867, 2470, 3022 |
| BceAI | ACGGC | 2 cut(s) | 1172, 2133 |
| BciT130I | CCWGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| BciVI | GTATCC | 3 cut(s) | 51, 924, 2673 |
| BclI | TGATCA | 1 cut(s) | 714 |
| BfaI | CTAG | 6 cut(s) | 354, 1355, 1475, 1790, 1808, 2411 |
| BfmI | CTRYAG | 4 cut(s) | 19, 1080, 1885, 1917 |
| BfrI | CTTAAG | 2 cut(s) | 1159, 1505 |
| BfuAI | ACCTGC | 1 cut(s) | 2914 |
| BfuI | GTATCC | 3 cut(s) | 51, 924, 2673 |
| BglII | AGATCT | 1 cut(s) | 1768 |
| Bme1390I | CCNGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| Bme18I | GGWCC | 1 cut(s) | 988 |
| BmeT110I | CYCGRG | 2 cut(s) | 1061, 2865 |
| BmgT120I | GGNCC | 2 cut(s) | 988, 1777 |
| BmiI | GGNNCC | 3 cut(s) | 821, 1813, 2604 |
| BmrFI | CCNGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| BmsI | GCATC | 4 cut(s) | 367, 586, 1772, 2549 |
| BpiI | GAAGAC | 5 cut(s) | 210, 863, 1494, 2009, 2426 |
| BpmI | CTGGAG | 4 cut(s) | 801, 990, 2042, 2448 |
| Bpu14I | TTCGAA | 1 cut(s) | 2068 |
| BpuEI | CTTGAG | 5 cut(s) | 447, 1293, 1757, 1802, 2182 |
| Bsa29I | ATCGAT | 1 cut(s) | 114 |
| BsaBI | GATNNNNATC | 1 cut(s) | 110 |
| BsaHI | GRCGYC | 2 cut(s) | 99, 705 |
| BsaJI | CCNNGG | 4 cut(s) | 287, 563, 2119, 2203 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1857, 1887 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 614, 763, 1731, 2898 |
| Bse1I | ACTGG | 1 cut(s) | 1736 |
| Bse3DI | GCAATG | 2 cut(s) | 1373, 2173 |
| Bse8I | GATNNNNATC | 1 cut(s) | 110 |
| BseBI | CCWGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| BseCI | ATCGAT | 1 cut(s) | 114 |
| BseDI | CCNNGG | 4 cut(s) | 287, 563, 2119, 2203 |
| BseJI | GATNNNNATC | 1 cut(s) | 110 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 614, 763, 1731, 2898 |
| BseMI | GCAATG | 2 cut(s) | 1373, 2173 |
| BseMII | CTCAG | 3 cut(s) | 873, 2786, 2864 |
| BseNI | ACTGG | 1 cut(s) | 1736 |
| BseRI | GAGGAG | 3 cut(s) | 2460, 2688, 3012 |
| BseSI | GKGCMC | 2 cut(s) | 822, 1867 |
| BshFI | GGCC | 3 cut(s) | 731, 1187, 1779 |
| BshNI | GGYRCC | 1 cut(s) | 819 |
| BshVI | ATCGAT | 1 cut(s) | 114 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1228, 1867, 2470, 3022 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1061, 2865 |
| BslFI | GGGAC | 1 cut(s) | 2468 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 614, 763, 1731, 2898 |
| BsmFI | GGGAC | 1 cut(s) | 2468 |
| BsmI | GAATGC | 1 cut(s) | 1378 |
| BsnI | GGCC | 3 cut(s) | 731, 1187, 1779 |
| BsoBI | CYCGRG | 2 cut(s) | 1061, 2865 |
| Bsp119I | TTCGAA | 1 cut(s) | 2068 |
| Bsp1286I | GDGCHC | 5 cut(s) | 822, 1228, 1867, 2470, 3022 |
| Bsp1407I | TGTACA | 1 cut(s) | 1101 |
| Bsp143I | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| BspACI | CCGC | 5 cut(s) | 93, 96, 412, 991, 1519 |
| BspANI | GGCC | 3 cut(s) | 731, 1187, 1779 |
| BspCNI | CTCAG | 3 cut(s) | 874, 2785, 2863 |
| BspDI | ATCGAT | 1 cut(s) | 114 |
| BspLI | GGNNCC | 3 cut(s) | 821, 1813, 2604 |
| BspMI | ACCTGC | 1 cut(s) | 2914 |
| BspPI | GGATC | 3 cut(s) | 554, 2518, 2650 |
| BspQI | GCTCTTC | 3 cut(s) | 66, 396, 2458 |
| BspT104I | TTCGAA | 1 cut(s) | 2068 |
| BspT107I | GGYRCC | 1 cut(s) | 819 |
| BspTI | CTTAAG | 2 cut(s) | 1159, 1505 |
| BsrDI | GCAATG | 2 cut(s) | 1373, 2173 |
| BsrGI | TGTACA | 1 cut(s) | 1101 |
| BsrI | ACTGG | 1 cut(s) | 1736 |
| BssECI | CCNNGG | 4 cut(s) | 287, 563, 2119, 2203 |
| BssMI | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| BssNI | GRCGYC | 2 cut(s) | 99, 705 |
| BssSI | CACGAG | 3 cut(s) | 1272, 1284, 1296 |
| BssT1I | CCWWGG | 1 cut(s) | 2119 |
| Bst2BI | CACGAG | 3 cut(s) | 1272, 1284, 1296 |
| Bst2UI | CCWGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| Bst4CI | ACNGT | 3 cut(s) | 2078, 2281, 2626 |
| Bst6I | CTCTTC | 7 cut(s) | 66, 396, 411, 1214, 1602, 2458, 2943 |
| BstACI | GRCGYC | 2 cut(s) | 99, 705 |
| BstAFI | CTTAAG | 2 cut(s) | 1159, 1505 |
| BstAUI | TGTACA | 1 cut(s) | 1101 |
| BstBI | TTCGAA | 1 cut(s) | 2068 |
| BstC8I | GCNNGC | 2 cut(s) | 1151, 1315 |
| BstDEI | CTNAG | 6 cut(s) | 882, 1623, 2210, 2772, 2850, 2910 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 761 |
| BstHHI | GCGC | 1 cut(s) | 2035 |
| BstKTI | GATC | 7 cut(s) | 562, 630, 717, 1121, 1771, 2513, 2658 |
| BstMBI | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 329, 377, 386, 389, 1051, 1760, 3008, 3017 |
| BstNI | CCWGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| BstNSI | RCATGY | 3 cut(s) | 961, 1871, 2095 |
| BstSCI | CCNGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| BstSFI | CTRYAG | 4 cut(s) | 19, 1080, 1885, 1917 |
| BstSLI | GKGCMC | 2 cut(s) | 822, 1867 |
| BstV2I | GAAGAC | 5 cut(s) | 210, 863, 1494, 2009, 2426 |
| BstX2I | RGATCY | 3 cut(s) | 1768, 2510, 2655 |
| BstYI | RGATCY | 3 cut(s) | 1768, 2510, 2655 |
| Bsu15I | ATCGAT | 1 cut(s) | 114 |
| BsuI | GTATCC | 3 cut(s) | 51, 924, 2673 |
| BsuRI | GGCC | 3 cut(s) | 731, 1187, 1779 |
| BsuTUI | ATCGAT | 1 cut(s) | 114 |
| BtgZI | GCGATG | 1 cut(s) | 2229 |
| BtsI | GCAGTG | 1 cut(s) | 2362 |
| BtsIMutI | CAGTG | 3 cut(s) | 2048, 2083, 2362 |
| BveI | ACCTGC | 1 cut(s) | 2914 |
| Cac8I | GCNNGC | 2 cut(s) | 1151, 1315 |
| CaiI | CAGNNNCTG | 2 cut(s) | 395, 1840 |
| CfoI | GCGC | 1 cut(s) | 2035 |
| Cfr13I | GGNCC | 2 cut(s) | 988, 1777 |
| ClaI | ATCGAT | 1 cut(s) | 114 |
| CseI | GACGC | 4 cut(s) | 88, 713, 1394, 2003 |
| Csp6I | GTAC | 4 cut(s) | 1102, 1232, 1672, 2151 |
| CviQI | GTAC | 4 cut(s) | 1102, 1232, 1672, 2151 |
| DdeI | CTNAG | 6 cut(s) | 882, 1623, 2210, 2772, 2850, 2910 |
| DpnI | GATC | 7 cut(s) | 561, 629, 716, 1120, 1770, 2512, 2657 |
| DpnII | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| DraI | TTTAAA | 2 cut(s) | 1822, 2668 |
| EaeI | YGGCCR | 1 cut(s) | 729 |
| Eam1104I | CTCTTC | 7 cut(s) | 66, 396, 411, 1214, 1602, 2458, 2943 |
| EarI | CTCTTC | 7 cut(s) | 66, 396, 411, 1214, 1602, 2458, 2943 |
| Ecl136II | GAGCTC | 2 cut(s) | 2468, 3020 |
| Eco130I | CCWWGG | 1 cut(s) | 2119 |
| Eco24I | GRGCYC | 2 cut(s) | 2470, 3022 |
| Eco32I | GATATC | 1 cut(s) | 2347 |
| Eco47I | GGWCC | 1 cut(s) | 988 |
| Eco53kI | GAGCTC | 2 cut(s) | 2468, 3020 |
| Eco57I | CTGAAG | 3 cut(s) | 222, 405, 417 |
| Eco88I | CYCGRG | 2 cut(s) | 1061, 2865 |
| EcoICRI | GAGCTC | 2 cut(s) | 2468, 3020 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 761 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1777 |
| EcoRII | CCWGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| EcoRV | GATATC | 1 cut(s) | 2347 |
| EcoT14I | CCWWGG | 1 cut(s) | 2119 |
| EcoT22I | ATGCAT | 1 cut(s) | 1701 |
| EcoT38I | GRGCYC | 2 cut(s) | 2470, 3022 |
| ErhI | CCWWGG | 1 cut(s) | 2119 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1142, 1174 |
| FaqI | GGGAC | 1 cut(s) | 2468 |
| FauI | CCCGC | 2 cut(s) | 405, 1512 |
| FauNDI | CATATG | 2 cut(s) | 910, 1050 |
| FbaI | TGATCA | 1 cut(s) | 714 |
| FriOI | GRGCYC | 2 cut(s) | 2470, 3022 |
| FspBI | CTAG | 6 cut(s) | 354, 1355, 1475, 1790, 1808, 2411 |
| FspI | TGCGCA | 1 cut(s) | 2034 |
| GlaI | GCGC | 1 cut(s) | 2034 |
| GsuI | CTGGAG | 4 cut(s) | 801, 990, 2042, 2448 |
| HaeIII | GGCC | 3 cut(s) | 731, 1187, 1779 |
| HgaI | GACGC | 4 cut(s) | 88, 713, 1394, 2003 |
| HhaI | GCGC | 1 cut(s) | 2035 |
| Hin1I | GRCGYC | 2 cut(s) | 99, 705 |
| Hin6I | GCGC | 1 cut(s) | 2033 |
| HinP1I | GCGC | 1 cut(s) | 2033 |
| HindIII | AAGCTT | 1 cut(s) | 1502 |
| HphI | GGTGA | 5 cut(s) | 910, 1377, 1541, 2135, 2938 |
| Hpy166II | GTNNAC | 6 cut(s) | 1102, 1674, 1865, 2126, 2818, 2862 |
| Hpy8I | GTNNAC | 6 cut(s) | 1102, 1674, 1865, 2126, 2818, 2862 |
| Hpy99I | CGWCG | 2 cut(s) | 16, 1263 |
| HpyCH4III | ACNGT | 3 cut(s) | 2078, 2281, 2626 |
| HpyCH4IV | ACGT | 3 cut(s) | 543, 643, 2176 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 329, 377, 386, 389, 1051, 1760, 3008, 3017 |
| HpyF3I | CTNAG | 6 cut(s) | 882, 1623, 2210, 2772, 2850, 2910 |
| HpySE526I | ACGT | 3 cut(s) | 543, 643, 2176 |
| Hsp92I | GRCGYC | 2 cut(s) | 99, 705 |
| HspAI | GCGC | 1 cut(s) | 2033 |
| Ksp22I | TGATCA | 1 cut(s) | 714 |
| Kzo9I | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| LguI | GCTCTTC | 3 cut(s) | 66, 396, 2458 |
| LmnI | GCTCC | 6 cut(s) | 328, 971, 2279, 2473, 3017, 3025 |
| LweI | GCATC | 4 cut(s) | 367, 586, 1772, 2549 |
| MaeI | CTAG | 6 cut(s) | 354, 1355, 1475, 1790, 1808, 2411 |
| MaeII | ACGT | 3 cut(s) | 543, 643, 2176 |
| MaeIII | GTNAC | 7 cut(s) | 100, 140, 1262, 1274, 1286, 1298, 2228 |
| MalI | GATC | 7 cut(s) | 561, 629, 716, 1120, 1770, 2512, 2657 |
| MboI | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| MflI | RGATCY | 3 cut(s) | 1768, 2510, 2655 |
| MhlI | GDGCHC | 5 cut(s) | 822, 1228, 1867, 2470, 3022 |
| MlsI | TGGCCA | 1 cut(s) | 731 |
| MluCI | AATT | 9 cut(s) | 553, 741, 982, 996, 1322, 1343, 1613, 2064, 2196 |
| MluNI | TGGCCA | 1 cut(s) | 731 |
| MlyI | GAGTC | 3 cut(s) | 467, 2713, 2785 |
| MmeI | TCCRAC | 2 cut(s) | 242, 1670 |
| Mox20I | TGGCCA | 1 cut(s) | 731 |
| Mph1103I | ATGCAT | 1 cut(s) | 1701 |
| MroXI | GAANNNNTTC | 4 cut(s) | 237, 1037, 1254, 2064 |
| MscI | TGGCCA | 1 cut(s) | 731 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1430, 2448, 2939 |
| Msp20I | TGGCCA | 1 cut(s) | 731 |
| MspA1I | CMGCKG | 4 cut(s) | 383, 395, 409, 2030 |
| MspCI | CTTAAG | 2 cut(s) | 1159, 1505 |
| MspR9I | CCNGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| MssI | GTTTAAAC | 1 cut(s) | 1822 |
| Mva1269I | GAATGC | 1 cut(s) | 1378 |
| MvaI | CCWGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 329, 377, 386, 389, 1051, 1760, 3008, 3017 |
| NdeI | CATATG | 2 cut(s) | 910, 1050 |
| NdeII | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| NlaIV | GGNNCC | 3 cut(s) | 821, 1813, 2604 |
| NmuCI | GTSAC | 5 cut(s) | 100, 1262, 1274, 1286, 1298 |
| NsbI | TGCGCA | 1 cut(s) | 2034 |
| NsiI | ATGCAT | 1 cut(s) | 1701 |
| NspI | RCATGY | 3 cut(s) | 961, 1871, 2095 |
| NspV | TTCGAA | 1 cut(s) | 2068 |
| PaeR7I | CTCGAG | 2 cut(s) | 1061, 2865 |
| PaqCI | CACCTGC | 1 cut(s) | 2914 |
| PciSI | GCTCTTC | 3 cut(s) | 66, 396, 2458 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2606 |
| PctI | GAATGC | 1 cut(s) | 1378 |
| PdmI | GAANNNNTTC | 4 cut(s) | 237, 1037, 1254, 2064 |
| PfoI | TCCNGGA | 4 cut(s) | 490, 778, 967, 1724 |
| PleI | GAGTC | 3 cut(s) | 467, 2712, 2784 |
| PmeI | GTTTAAAC | 1 cut(s) | 1822 |
| PpsI | GAGTC | 3 cut(s) | 467, 2712, 2784 |
| PsiI | TTATAA | 2 cut(s) | 669, 2483 |
| Psp124BI | GAGCTC | 2 cut(s) | 2470, 3022 |
| Psp6I | CCWGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| PspGI | CCWGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| PspN4I | GGNNCC | 3 cut(s) | 821, 1813, 2604 |
| PspPI | GGNCC | 2 cut(s) | 988, 1777 |
| PstNI | CAGNNNCTG | 2 cut(s) | 395, 1840 |
| PsuI | RGATCY | 3 cut(s) | 1768, 2510, 2655 |
| PvuII | CAGCTG | 4 cut(s) | 383, 395, 409, 2030 |
| RsaI | GTAC | 4 cut(s) | 1103, 1233, 1673, 2152 |
| RsaNI | GTAC | 4 cut(s) | 1102, 1232, 1672, 2151 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1430, 2448, 2939 |
| SacI | GAGCTC | 2 cut(s) | 2470, 3022 |
| SapI | GCTCTTC | 3 cut(s) | 66, 396, 2458 |
| Sau3AI | GATC | 7 cut(s) | 559, 627, 714, 1118, 1768, 2510, 2655 |
| Sau96I | GGNCC | 2 cut(s) | 988, 1777 |
| SchI | GAGTC | 3 cut(s) | 467, 2713, 2785 |
| ScrFI | CCNGG | 8 cut(s) | 492, 564, 609, 663, 780, 969, 1726, 2205 |
| SduI | GDGCHC | 5 cut(s) | 822, 1228, 1867, 2470, 3022 |
| SfaNI | GCATC | 4 cut(s) | 367, 586, 1772, 2549 |
| SfcI | CTRYAG | 4 cut(s) | 19, 1080, 1885, 1917 |
| Sfr274I | CTCGAG | 2 cut(s) | 1061, 2865 |
| SfuI | TTCGAA | 1 cut(s) | 2068 |
| SinI | GGWCC | 1 cut(s) | 988 |
| SlaI | CTCGAG | 2 cut(s) | 1061, 2865 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1430, 2448, 2939 |
| SmlI | CTYRAG | 9 cut(s) | 462, 1061, 1159, 1308, 1505, 1772, 1781, 2161, 2865 |
| SmoI | CTYRAG | 9 cut(s) | 462, 1061, 1159, 1308, 1505, 1772, 1781, 2161, 2865 |
| Sse9I | AATT | 9 cut(s) | 553, 741, 982, 996, 1322, 1343, 1613, 2064, 2196 |
| SsiI | CCGC | 5 cut(s) | 93, 96, 412, 991, 1519 |
| SspI | AATATT | 3 cut(s) | 577, 1212, 1400 |
| SspMI | CTAG | 6 cut(s) | 354, 1355, 1475, 1790, 1808, 2411 |
| SstI | GAGCTC | 2 cut(s) | 2470, 3022 |
| StyD4I | CCNGG | 8 cut(s) | 490, 562, 607, 661, 778, 967, 1724, 2203 |
| StyI | CCWWGG | 1 cut(s) | 2119 |
| TaaI | ACNGT | 3 cut(s) | 2078, 2281, 2626 |
| TaiI | ACGT | 3 cut(s) | 546, 646, 2179 |
| TasI | AATT | 9 cut(s) | 553, 741, 982, 996, 1322, 1343, 1613, 2064, 2196 |
| TatI | WGTACW | 3 cut(s) | 1101, 1231, 1671 |
| TauI | GCSGC | 2 cut(s) | 96, 99 |
| TscAI | CASTG | 3 cut(s) | 2055, 2083, 2362 |
| TseFI | GTSAC | 5 cut(s) | 100, 1262, 1274, 1286, 1298 |
| Tsp45I | GTSAC | 5 cut(s) | 100, 1262, 1274, 1286, 1298 |
| TspGWI | ACGGA | 3 cut(s) | 189, 245, 2123 |
| TspRI | CASTG | 3 cut(s) | 2055, 2083, 2362 |
| Vha464I | CTTAAG | 2 cut(s) | 1159, 1505 |
| VneI | GTGCAC | 1 cut(s) | 1863 |
| VpaK11BI | GGWCC | 1 cut(s) | 988 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 761 |
| XapI | RAATTY | 5 cut(s) | 553, 741, 982, 1613, 2064 |
| XbaI | TCTAGA | 1 cut(s) | 1354 |
| XceI | RCATGY | 3 cut(s) | 961, 1871, 2095 |
| XhoI | CTCGAG | 2 cut(s) | 1061, 2865 |
| XmnI | GAANNNNTTC | 4 cut(s) | 237, 1037, 1254, 2064 |
| XspI | CTAG | 6 cut(s) | 354, 1355, 1475, 1790, 1808, 2411 |
| Zsp2I | ATGCAT | 1 cut(s) | 1701 |