Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002185

Physical Location & Seq

Genomic Coordinates Reverse (-)

33639755 .. 33649768

Gene Structure 10014 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G367600.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3231 bp

ATGGGAGTTCCAGCATTCTATAGATGGTTGGCGGAGAAGTATCCGCTCGTGGTGGTCGACGTGGTGGAAGAAGAACCCGTTGTAATCGATAACATATCGATTCCGGTTGACACCAGTAAACCAAACCCTAATGGTCTTGAATACGACAATCTTTACCTCGACATGAACGGGATTATTCACCCCTGTTTTCACCCCGAAGATAGGCCTTCTCCATCAACCTTTGATGAGGTATTTCAGTGCATGTTTGACTACATAGATAGACTCTTTGTGATGGTGCGACCTCGAAAGCTATTATACATGGCTATTGATGGCGTTGCCCCCAGGGCAAAAATGAATCAACAGCGGTCTCGCCGATTTAGAGCTGCTAAAGATGCAGCAGATGCGGCAGCTGAAGAAGAACGGCTACGTGAGGAGTTTGAAACGGAGGGGAGAAAACTTCCACCCAAACAGCAGTCACAAGTTGTTGATTCTAATGTTATCACTCCTGGGACTCAATTTATGGCTGTTTTGTCAGTTGCATTGCAATACTATGTCCATCTTAGACTAAACAATGACCCTGGATGGAAAAATGTTAAGGTTATTCTTTCTGATGCAAATGTCCCAGGTGAAGGGGAACACAAAGTTATGTCATATATTCGCCTTCAAAGAAATCTTCCTGGTTATGATCCAAATACACGCCATTGCCTGTATGGTTTGGATGCCGATTTGATTATGCTTGCTTTGGCTACTCATGAAGTTCATTTTTCAATTCTTCGAGAGGTTGTTTTCACTCCTGGACAGCAAGACAAATGCTTCCTATGCGGTCAGATGGGTCATTTAGCGGCAAATTGCGAAGGAAAGGCGAAACGGAAGGCCGGAGAGTTTGATGAGAAAGCTGATGGCGAGGCTGTGGCCAAGAAGCCATACCAGTTTCTCAACATCTGGACTCTTAGAGAATATTTGGAGCTTGAGATGCAAATTCCCAATTCCCCAATTGAGATTGATTCTGAGCGCATCGTAGATGATTTTATATTCATTTGTTTCTTTGTTGGCAACGATTTCTTACCACACATGCCGACACTGGAGATTCGTGAGGGTGCGATCAACTTGCTTTTCGCTGTATACAAAAAGGAATTTAGGGCATTGGGTGGATATTTGACTGATGGAAGCAAGCCGAATTTGAGTAGAGTAGAGCATTTCATTCAGGCAGTTGGTTCTTATGAAGATAAAATATTTCAGAAAAGAGCTCGATTGCATCAGCGGCAGGCAGATAGAATAAAGCGTGAGAAGGGGCAATTGAGAAGAGGAGATGATGCAAGGCCCGAAGTGCAACCAGATTCATTAGTTGCAGTTTCTCGTTTTCATGGTTCTCGTCTTGCTTCAGGTCATTCGCCTTCCCCCTATCAACAATCTGGAAAATTTAATGGTCAAGCGAATCCTCGAAAGGTAGCACGTTTGTCTTTAGAGGGGTCAACCATCGGTGCTGCTATTGTTGAAGCTGAGAACAGTCTTGAAGGAGATGTAGATGGAAACAAAGAAGAATTAAAAGCAAAGTTAAAGGAGGTTCTTCGCGAGAAATCTGACCTTTTTAACTCGGGAAATGGTGATGAAGACAAGGTTAAATTGGGAGAACCTGGGTGGAAAGATAGGTATTATGAAGAAAAGTTTTCTGCAAAAACTCCTGAAGAACGTGAAGCAATTCGAAAAGATGTTGTTTTGCGATACACGGAAGGTCTATGTTGGGTGATGCACTATTATTATGAAGGGGTTTGTTCATGGCAGTGGTTTTATCCCTATCATTATGCACCATTTGCATCTGATCTCAAGGACCTTGACCAGCTAAATATAAGTTTTGATTTGGGCTCTCCCTTTAAACCATTCAATCAGCTGTTGGGGGTTTTTCCTGCTGCAAGCTCCCATGCCCTTCCTGAGCAGTATAGGAAGCTGATGACTGATCCAAACTCACCTATCATTGATTTTTACCCTGTTGATTTTGAAGTGGATATGAATGGGAAGCGGTTTGCTTGGCAGGGTATTGCGAAGTTGCCTTTTATTGATGAAGCCCGTCTTCTTGCTGAGGTTGAAAAACTCGAACATACATTAACGGAAGAGGAGACCCGTAGAAACAGTGTGATGTTTGAGATGCTTTTTGTTACATCGTCTCATCCTCTCTCTGTATGCATATATTCTCTTGACAATCGCTGTAAACAGTTGACAGACAAAGAGCGAGTTGAAGTTAAGGAGCAGATCGATCCCAAGTACAGGGATGCATGCAGTGAAGGTATGAACGGTTATATATCTCCTTGTACTGGAGAGCCTTGTCCTCCGGTGTTTCGGTCTCCTGTTGAAAGCATGGAGGATATTATGGACAACCAAGTAATATGTGCGATATACAGACTACCAGATGGGCATAAGCATATAACTCGACCACCTGCAGGTGTTATATTTCCTAAGAAGATTGTGTCAGTGGGGGATTTGAAGCCTGCACCTGTTTTGTGGCATGAAGAGTCTGGGCGAAAGCCATTTGAAAATGCCAGAAGGCCATTTGAAAATGCCAGAAGGCCATTTGACAATGCCAGGCAGAACCCTCCTGGAAGCATTTCTGGAAGACATCTCGAGGAAGCGGCACATCGCCTTATTGTTAATAGCTTACAGCCTAAGGTAGACTCCAATGGGTATGGCAATCAGATGCATGCCCTTCGACCATCTTATGTCGGGCCTCCGAATTACCCACCACACCATTCCTACACCAATAACGGAAGCTATGCACAGGGACACAGTAGAATGCCACCACCTAGAACAATCCACCATCCTCAAGCTCAACACCGAGCTTCCAATGTTAATGCCATCCCAAGACATGGTGACCCTGCATATAATGATCGACATTCTTCATCAGCTGCCCACCATCATCAGAATAGCTCTCATACTCAACATTATGAAAGGAGTTCTGGGCAAGGATACCACCATTCAGGAAATCACCAGAGCGGAGGACCAATCTACCCTCAGAGACCTATTCCACAAGCTCCACCAGGAGTCACTCCTGTTCCTTATCAAGGTGGGTATAACAACTATCAGAATTACCAACCATCTGGACCGCCTGCTCAAGGTTTTGATGGCTGGGTTCCACAGGTTAGCCAGAACCCGGGCAGAGGGTATGGCCGCCCTCAACAGTCTGGAAACCAGTACTCCGGATTGGACAGAAGAGGCCATAGGAGGCCACCTCCACCCCAGCCTGGGTATGGCCACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0000967 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010586 GO:0010587 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0022613 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0071025 GO:0071027 GO:0071029 GO:0071035 GO:0071046 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 map03008 map03018

Pfam Domains

Protein Families

XRN_N zf-CCHC

Protein Analysis

1077

Amino Acids

122.04

Weight (kDa)

6.63

Isoelectric Point (pI)

50.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75660 AT5G42540 AT5G42540
fragaria_vesca	FvH4_2g38700 FvH4_2g38700 FvH4_5g21470
malus_domestica	MD00G1128500.v1.1 MD08G1014700.v1.1 MD15G1014000.v1.1
prunus_persica	Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1
pyrus_communis	pycom08g01310 pycom15g01210
rosa_chinensis	RchiOBHm_Chr5g0009961 RchiOBHm_Chr6g0302611
rosa_laevigata	RLG00000011157 RLG00000031714
rosa_multiflora	Rmu_sc0027322.1_g000001 Rmu_sc0027323.1_g000001 Rmu_sc0039467.1_g000001 Rmu_sc0039989.1_g000001 Rmu_sc0041627.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066230 Rroxscaffold_7G00165520
rosa_rugosa	Rorug04G0447300 Rorug06G0315300 Rorug06G0315400
rosa_samantha	Rh5AG078800 Rh5BG073500 Rh5CG086100 Rh5DG074200 Rh5DG336700 Rh6AG428700 Rh6BG473800 Rh6CG441000 Rh6DG427700
rosa_wichuraiana	Rw6G037100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2405, 2419
Acc36I	ACCTGC	2 cut(s)	2405, 2419
AccB7I	CCANNNNNTGG	1 cut(s)	2837
AccBSI	CCGCTC	2 cut(s)	46, 2964
AccI	GTMKAC	3 cut(s)	57, 1101, 2643
AccII	CGCG	1 cut(s)	1551
AccIII	TCCGGA	1 cut(s)	3167
AclWI	GGATC	3 cut(s)	659, 1928, 2225
AcoI	YGGCCR	3 cut(s)	891, 3136, 3220
AcsI	RAATTY	4 cut(s)	957, 1112, 1156, 1397
AcuI	CTGAAG	3 cut(s)	411, 1344, 1683
AfaI	GTAC	3 cut(s)	2240, 2287, 3164
AjiI	CACGTC	1 cut(s)	61
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	5 cut(s)	351, 2087, 2145, 2322, 2980
AlwI	GGATC	3 cut(s)	659, 1928, 2225
Ama87I	CYCGRG	3 cut(s)	1573, 2594, 3121
Aor13HI	TCCGGA	1 cut(s)	3167
ApeKI	GCWGC	6 cut(s)	362, 374, 386, 1463, 1886, 2876
ApoI	RAATTY	4 cut(s)	957, 1112, 1156, 1397
Asp700I	GAANNNNTTC	2 cut(s)	1677, 2578
AspLEI	GCGC	1 cut(s)	993
AspS9I	GGNCC	5 cut(s)	1299, 1807, 2696, 2969, 3071
AsuC2I	CCSGG	2 cut(s)	3122, 3123
AsuHPI	GGTGA	8 cut(s)	170, 182, 617, 1595, 1735, 1935, 2852, 2948
AsuII	TTCGAA	1 cut(s)	1681
AvaI	CYCGRG	3 cut(s)	1573, 2594, 3121
AvaII	GGWCC	3 cut(s)	1807, 2969, 3071
AxyI	CCTNAGG	1 cut(s)	2637
BalI	TGGCCA	2 cut(s)	893, 3222
BanII	GRGCYC	2 cut(s)	1228, 1844
BarI	GAAGNNNNNNTAC	2 cut(s)	387, 419
BauI	CACGAG	1 cut(s)	47
BbsI	GAAGAC	3 cut(s)	1596, 2039, 2593
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	2055
BbvI	GCAGC	6 cut(s)	349, 386, 398, 1450, 1873, 2863
BceAI	ACGGC	1 cut(s)	416
BcgI	CGANNNNNNTGC	6 cut(s)	1069, 1103, 2384, 2418, 2660, 2694
BciVI	GTATCC	2 cut(s)	51, 2930
BcnI	CCSGG	2 cut(s)	3122, 3123
BcoDI	GTCTC	5 cut(s)	351, 2087, 2145, 2322, 2980
BfaI	CTAG	1 cut(s)	2775
BfmI	CTRYAG	2 cut(s)	19, 2412
BfuAI	ACCTGC	2 cut(s)	2405, 2419
BfuI	GTATCC	2 cut(s)	51, 2930
BglI	GCCNNNNNGGC	1 cut(s)	323
BmcAI	AGTACT	1 cut(s)	3164
Bme18I	GGWCC	3 cut(s)	1807, 2969, 3071
BmeT110I	CYCGRG	3 cut(s)	1573, 2594, 3121
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	5 cut(s)	1299, 1807, 2696, 2969, 3071
BmiI	GGNNCC	1 cut(s)	3102
BpiI	GAAGAC	3 cut(s)	1596, 2039, 2593
BplI	GAGNNNNNCTC	2 cut(s)	3184, 3216
BpmI	CTGGAG	2 cut(s)	1082, 2310
Bpu10I	CCTNAGC	2 cut(s)	1908, 2055
Bpu14I	TTCGAA	1 cut(s)	1681
BpuEI	CTTGAG	4 cut(s)	968, 1787, 2778, 3066
BpuMI	CCSGG	2 cut(s)	3122, 3123
Bsa29I	ATCGAT	3 cut(s)	87, 98, 2229
BsaAI	YACGTR	1 cut(s)	407
BsaI	GGTCTC	4 cut(s)	351, 2087, 2322, 2980
BsaJI	CCNNGG	8 cut(s)	320, 321, 485, 556, 601, 1613, 3121, 3212
BsaWI	WCCGGW	3 cut(s)	103, 2305, 3167
BsaXI	ACNNNNNCTCC	2 cut(s)	3149, 3179
Bse1I	ACTGG	5 cut(s)	114, 907, 1065, 2293, 3160
Bse21I	CCTNAGG	1 cut(s)	2637
Bse3DI	GCAATG	2 cut(s)	518, 679
BseAI	TCCGGA	1 cut(s)	3167
BseCI	ATCGAT	3 cut(s)	87, 98, 2229
BseDI	CCNNGG	8 cut(s)	320, 321, 485, 556, 601, 1613, 3121, 3212
BseGI	GGATG	6 cut(s)	566, 703, 2143, 2251, 2788, 2826
BseMI	GCAATG	2 cut(s)	518, 679
BseMII	CTCAG	5 cut(s)	978, 1470, 1899, 2046, 2996
BseNI	ACTGG	5 cut(s)	114, 907, 1065, 2293, 3160
BseRI	GAGGAG	3 cut(s)	425, 1299, 2105
BseXI	GCAGC	6 cut(s)	349, 386, 398, 1450, 1873, 2863
BseYI	CCCAGC	2 cut(s)	3096, 3207
BsgI	GTGCAG	1 cut(s)	2448
Bsh1236I	CGCG	1 cut(s)	1551
BshVI	ATCGAT	3 cut(s)	87, 98, 2229
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	3 cut(s)	1573, 2594, 3121
BsiSI	CCGG	5 cut(s)	104, 855, 2306, 3122, 3168
BslFI	GGGAC	3 cut(s)	502, 584, 2766
BsmAI	GTCTC	5 cut(s)	351, 2087, 2145, 2322, 2980
BsmBI	CGTCTC	1 cut(s)	2145
BsmFI	GGGAC	3 cut(s)	502, 584, 2766
BsmI	GAATGC	2 cut(s)	14, 2769
Bso31I	GGTCTC	4 cut(s)	351, 2087, 2322, 2980
BsoBI	CYCGRG	3 cut(s)	1573, 2594, 3121
Bsp119I	TTCGAA	1 cut(s)	1681
Bsp1286I	GDGCHC	2 cut(s)	1228, 1844
Bsp13I	TCCGGA	1 cut(s)	3167
Bsp143I	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
Bsp68I	TCGCGA	1 cut(s)	1551
BspCNI	CTCAG	5 cut(s)	979, 1471, 1900, 2047, 2995
BspDI	ATCGAT	3 cut(s)	87, 98, 2229
BspEI	TCCGGA	1 cut(s)	3167
BspFNI	CGCG	1 cut(s)	1551
BspHI	TCATGA	1 cut(s)	730
BspLI	GGNNCC	1 cut(s)	3102
BspMAI	CTGCAG	1 cut(s)	2416
BspMI	ACCTGC	2 cut(s)	2405, 2419
BspPI	GGATC	3 cut(s)	659, 1928, 2225
BspT104I	TTCGAA	1 cut(s)	1681
BspTNI	GGTCTC	4 cut(s)	351, 2087, 2322, 2980
BsrBI	CCGCTC	2 cut(s)	46, 2964
BsrDI	GCAATG	2 cut(s)	518, 679
BsrI	ACTGG	5 cut(s)	114, 907, 1065, 2293, 3160
BssECI	CCNNGG	8 cut(s)	320, 321, 485, 556, 601, 1613, 3121, 3212
BssMI	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
BssNAI	GTATAC	1 cut(s)	1102
BssSI	CACGAG	1 cut(s)	47
Bst1107I	GTATAC	1 cut(s)	1102
Bst2BI	CACGAG	1 cut(s)	47
Bst4CI	ACNGT	6 cut(s)	1487, 2108, 2190, 2270, 2759, 3150
Bst6I	CTCTTC	4 cut(s)	1276, 2082, 2478, 3175
BstAPI	GCANNNNNTGC	2 cut(s)	380, 1790
BstBAI	YACGTR	1 cut(s)	407
BstBI	TTCGAA	1 cut(s)	1681
BstC8I	GCNNGC	8 cut(s)	717, 1151, 1245, 1891, 2251, 2463, 2673, 3078
BstDEI	CTNAG	9 cut(s)	539, 929, 987, 1479, 1908, 2055, 2430, 2637, 2982
BstEII	GGTNACC	1 cut(s)	2840
BstENI	CCTNNNNNAGG	2 cut(s)	3030, 3081
BstF5I	GGATG	6 cut(s)	566, 703, 2143, 2251, 2788, 2826
BstFNI	CGCG	1 cut(s)	1551
BstHHI	GCGC	1 cut(s)	993
BstKTI	GATC	7 cut(s)	667, 1083, 1801, 1936, 2229, 2233, 2860
BstMAI	GTCTC	5 cut(s)	351, 2087, 2145, 2322, 2980
BstMBI	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
BstMWI	GCNNNNNNNGC	9 cut(s)	323, 371, 380, 383, 798, 952, 1240, 1306, 1790
BstNSI	RCATGY	4 cut(s)	244, 1054, 2253, 2675
BstPI	GGTNACC	1 cut(s)	2840
BstSFI	CTRYAG	2 cut(s)	19, 2412
BstUI	CGCG	1 cut(s)	1551
BstV1I	GCAGC	6 cut(s)	349, 386, 398, 1450, 1873, 2863
BstV2I	GAAGAC	3 cut(s)	1596, 2039, 2593
BstXI	CCANNNNNNTGG	1 cut(s)	3068
BstZ17I	GTATAC	1 cut(s)	1102
Bsu15I	ATCGAT	3 cut(s)	87, 98, 2229
Bsu36I	CCTNAGG	1 cut(s)	2637
BsuI	GTATCC	2 cut(s)	51, 2930
BsuTUI	ATCGAT	3 cut(s)	87, 98, 2229
BtgZI	GCGATG	1 cut(s)	2594
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	6 cut(s)	566, 703, 2143, 2251, 2788, 2826
BtsI	GCAGTG	2 cut(s)	1766, 2260
BtsIMutI	CAGTG	6 cut(s)	242, 1058, 1766, 2113, 2260, 2451
BtuMI	TCGCGA	1 cut(s)	1551
BveI	ACCTGC	2 cut(s)	2405, 2419
Cac8I	GCNNGC	8 cut(s)	717, 1151, 1245, 1891, 2251, 2463, 2673, 3078
CciI	TCATGA	1 cut(s)	730
CfoI	GCGC	1 cut(s)	993
Cfr13I	GGNCC	5 cut(s)	1299, 1807, 2696, 2969, 3071
Cfr9I	CCCGGG	1 cut(s)	3121
ClaI	ATCGAT	3 cut(s)	87, 98, 2229
Csp6I	GTAC	3 cut(s)	2239, 2286, 3163
CviQI	GTAC	3 cut(s)	2239, 2286, 3163
DdeI	CTNAG	9 cut(s)	539, 929, 987, 1479, 1908, 2055, 2430, 2637, 2982
DpnI	GATC	7 cut(s)	666, 1082, 1800, 1935, 2228, 2232, 2859
DpnII	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
DraI	TTTAAA	1 cut(s)	1852
EaeI	YGGCCR	3 cut(s)	891, 3136, 3220
Eam1104I	CTCTTC	4 cut(s)	1276, 2082, 2478, 3175
EarI	CTCTTC	4 cut(s)	1276, 2082, 2478, 3175
EciI	GGCGGA	1 cut(s)	47
Ecl136II	GAGCTC	1 cut(s)	1226
Eco147I	AGGCCT	1 cut(s)	205
Eco24I	GRGCYC	2 cut(s)	1228, 1844
Eco31I	GGTCTC	4 cut(s)	351, 2087, 2322, 2980
Eco47I	GGWCC	3 cut(s)	1807, 2969, 3071
Eco53kI	GAGCTC	1 cut(s)	1226
Eco57I	CTGAAG	3 cut(s)	411, 1344, 1683
Eco81I	CCTNAGG	1 cut(s)	2637
Eco88I	CYCGRG	3 cut(s)	1573, 2594, 3121
Eco91I	GGTNACC	1 cut(s)	2840
EcoICRI	GAGCTC	1 cut(s)	1226
EcoNI	CCTNNNNNAGG	2 cut(s)	3030, 3081
EcoO109I	RGGNCCY	1 cut(s)	1807
EcoO65I	GGTNACC	1 cut(s)	2840
EcoT22I	ATGCAT	3 cut(s)	2162, 2251, 2673
EcoT38I	GRGCYC	2 cut(s)	1228, 1844
Esp3I	CGTCTC	1 cut(s)	2145
FalI	AAGNNNNNCTT	2 cut(s)	2031, 2063
FaqI	GGGAC	3 cut(s)	502, 584, 2766
FblI	GTMKAC	3 cut(s)	57, 1101, 2643
FokI	GGATG	6 cut(s)	573, 710, 2130, 2258, 2775, 2813
FriOI	GRGCYC	2 cut(s)	1228, 1844
FspBI	CTAG	1 cut(s)	2775
GlaI	GCGC	1 cut(s)	992
GsaI	CCCAGC	2 cut(s)	3100, 3211
GsuI	CTGGAG	2 cut(s)	1082, 2310
HapII	CCGG	5 cut(s)	104, 855, 2306, 3122, 3168
HhaI	GCGC	1 cut(s)	993
Hin6I	GCGC	1 cut(s)	991
HinP1I	GCGC	1 cut(s)	991
HincII	GTYRAC	4 cut(s)	58, 109, 1452, 2193
HindII	GTYRAC	4 cut(s)	58, 109, 1452, 2193
HpaII	CCGG	5 cut(s)	104, 855, 2306, 3122, 3168
HphI	GGTGA	8 cut(s)	170, 182, 617, 1595, 1735, 1935, 2852, 2948
Hpy166II	GTNNAC	8 cut(s)	58, 109, 119, 1102, 1452, 2186, 2193, 2644
Hpy8I	GTNNAC	8 cut(s)	58, 109, 119, 1102, 1452, 2186, 2193, 2644
Hpy99I	CGWCG	1 cut(s)	62
HpyCH4III	ACNGT	6 cut(s)	1487, 2108, 2190, 2270, 2759, 3150
HpyCH4IV	ACGT	4 cut(s)	60, 406, 1432, 1669
HpyF10VI	GCNNNNNNNGC	9 cut(s)	323, 371, 380, 383, 798, 952, 1240, 1306, 1790
HpyF3I	CTNAG	9 cut(s)	539, 929, 987, 1479, 1908, 2055, 2430, 2637, 2982
HpySE526I	ACGT	4 cut(s)	60, 406, 1432, 1669
HspAI	GCGC	1 cut(s)	991
Kpn2I	TCCGGA	1 cut(s)	3167
Kzo9I	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
LmnI	GCTCC	4 cut(s)	943, 1898, 2221, 3007
Lsp1109I	GCAGC	6 cut(s)	349, 386, 398, 1450, 1873, 2863
MaeI	CTAG	1 cut(s)	2775
MaeII	ACGT	4 cut(s)	60, 406, 1432, 1669
MaeIII	GTNAC	4 cut(s)	453, 2131, 2840, 3013
MalI	GATC	7 cut(s)	666, 1082, 1800, 1935, 2228, 2232, 2859
MbiI	CCGCTC	2 cut(s)	46, 2964
MboI	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
MfeI	CAATTG	2 cut(s)	972, 1274
MhlI	GDGCHC	2 cut(s)	1228, 1844
MlsI	TGGCCA	2 cut(s)	893, 3222
MluNI	TGGCCA	2 cut(s)	893, 3222
MlyI	GAGTC	6 cut(s)	255, 484, 919, 2495, 2639, 3021
Mox20I	TGGCCA	2 cut(s)	893, 3222
Mph1103I	ATGCAT	3 cut(s)	2162, 2251, 2673
MroI	TCCGGA	1 cut(s)	3167
MroXI	GAANNNNTTC	2 cut(s)	1677, 2578
MscI	TGGCCA	2 cut(s)	893, 3222
MslI	CAYNNNNRTG	1 cut(s)	1759
Msp20I	TGGCCA	2 cut(s)	893, 3222
MspA1I	CMGCKG	5 cut(s)	343, 389, 1240, 1867, 2876
MspI	CCGG	5 cut(s)	104, 855, 2306, 3122, 3168
MunI	CAATTG	2 cut(s)	972, 1274
Mva1269I	GAATGC	2 cut(s)	14, 2769
MvnI	CGCG	1 cut(s)	1551
MwoI	GCNNNNNNNGC	9 cut(s)	323, 371, 380, 383, 798, 952, 1240, 1306, 1790
NciI	CCSGG	2 cut(s)	3122, 3123
NdeII	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
NlaIV	GGNNCC	1 cut(s)	3102
NmuCI	GTSAC	3 cut(s)	453, 2840, 3013
NruI	TCGCGA	1 cut(s)	1551
NsiI	ATGCAT	3 cut(s)	2162, 2251, 2673
NspI	RCATGY	4 cut(s)	244, 1054, 2253, 2675
NspV	TTCGAA	1 cut(s)	1681
PaeI	GCATGC	2 cut(s)	2253, 2675
PaeR7I	CTCGAG	1 cut(s)	2594
PagI	TCATGA	1 cut(s)	730
PaqCI	CACCTGC	2 cut(s)	2405, 2419
PasI	CCCWGGG	1 cut(s)	321
PceI	AGGCCT	1 cut(s)	205
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	2 cut(s)	14, 2769
PdmI	GAANNNNTTC	2 cut(s)	1677, 2578
PfeI	GAWTC	7 cut(s)	100, 334, 467, 983, 1066, 1316, 1414
PflMI	CCANNNNNTGG	1 cut(s)	2837
PfoI	TCCNGGA	2 cut(s)	772, 2569
PleI	GAGTC	6 cut(s)	255, 484, 919, 2494, 2639, 3020
PpsI	GAGTC	6 cut(s)	255, 484, 919, 2494, 2639, 3020
Ppu21I	YACGTR	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	1807
Psp124BI	GAGCTC	1 cut(s)	1228
Psp5II	RGGWCCY	1 cut(s)	1807
PspEI	GGTNACC	1 cut(s)	2840
PspFI	CCCAGC	2 cut(s)	3096, 3207
PspN4I	GGNNCC	1 cut(s)	3102
PspPI	GGNCC	5 cut(s)	1299, 1807, 2696, 2969, 3071
PspPPI	RGGWCCY	1 cut(s)	1807
PstI	CTGCAG	1 cut(s)	2416
PvuII	CAGCTG	3 cut(s)	389, 1867, 2876
RruI	TCGCGA	1 cut(s)	1551
RsaI	GTAC	3 cut(s)	2240, 2287, 3164
RsaNI	GTAC	3 cut(s)	2239, 2286, 3163
RseI	CAYNNNNRTG	1 cut(s)	1759
SacI	GAGCTC	1 cut(s)	1228
SalI	GTCGAC	1 cut(s)	56
Sau3AI	GATC	7 cut(s)	664, 1080, 1798, 1933, 2226, 2230, 2857
Sau96I	GGNCC	5 cut(s)	1299, 1807, 2696, 2969, 3071
SbfI	CCTGCAGG	1 cut(s)	2416
ScaI	AGTACT	1 cut(s)	3164
SchI	GAGTC	6 cut(s)	255, 484, 919, 2495, 2639, 3021
SdaI	CCTGCAGG	1 cut(s)	2416
SduI	GDGCHC	2 cut(s)	1228, 1844
SfcI	CTRYAG	2 cut(s)	19, 2412
Sfr274I	CTCGAG	1 cut(s)	2594
SfuI	TTCGAA	1 cut(s)	1681
SinI	GGWCC	3 cut(s)	1807, 2969, 3071
SlaI	CTCGAG	1 cut(s)	2594
SmaI	CCCGGG	1 cut(s)	3123
SmiMI	CAYNNNNRTG	1 cut(s)	1759
SmlI	CTYRAG	5 cut(s)	947, 1802, 2594, 2793, 3081
SmoI	CTYRAG	5 cut(s)	947, 1802, 2594, 2793, 3081
SphI	GCATGC	2 cut(s)	2253, 2675
Sse8387I	CCTGCAGG	1 cut(s)	2416
SseBI	AGGCCT	1 cut(s)	205
SspI	AATATT	2 cut(s)	938, 1212
SspMI	CTAG	1 cut(s)	2775
SstI	GAGCTC	1 cut(s)	1228
StuI	AGGCCT	1 cut(s)	205
TaaI	ACNGT	6 cut(s)	1487, 2108, 2190, 2270, 2759, 3150
TaiI	ACGT	4 cut(s)	63, 409, 1435, 1672
TaqII	GACCGA	1 cut(s)	2304
TatI	WGTACW	3 cut(s)	2238, 2285, 3162
TauI	GCSGC	5 cut(s)	386, 824, 1243, 2606, 3141
TfiI	GAWTC	7 cut(s)	100, 334, 467, 983, 1066, 1316, 1414
TscAI	CASTG	6 cut(s)	242, 1065, 1766, 2113, 2260, 2451
TseFI	GTSAC	3 cut(s)	453, 2840, 3013
TseI	GCWGC	6 cut(s)	362, 374, 386, 1463, 1886, 2876
Tsp45I	GTSAC	3 cut(s)	453, 2840, 3013
TspGWI	ACGGA	5 cut(s)	437, 862, 1721, 2099, 2751
TspMI	CCCGGG	1 cut(s)	3121
TspRI	CASTG	6 cut(s)	242, 1065, 1766, 2113, 2260, 2451
Van91I	CCANNNNNTGG	1 cut(s)	2837
VpaK11BI	GGWCC	3 cut(s)	1807, 2969, 3071
XagI	CCTNNNNNAGG	2 cut(s)	3030, 3081
XapI	RAATTY	4 cut(s)	957, 1112, 1156, 1397
XceI	RCATGY	4 cut(s)	244, 1054, 2253, 2675
XcmI	CCANNNNNNNNNTGG	2 cut(s)	686, 3215
XhoI	CTCGAG	1 cut(s)	2594
XmaI	CCCGGG	1 cut(s)	3121
XmiI	GTMKAC	3 cut(s)	57, 1101, 2643
XmnI	GAANNNNTTC	2 cut(s)	1677, 2578
XspI	CTAG	1 cut(s)	2775
ZrmI	AGTACT	1 cut(s)	3164
Zsp2I	ATGCAT	3 cut(s)	2162, 2251, 2673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.