Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002185

Physical Location & Seq

Genomic Coordinates Reverse (-)

967097 .. 975058

Gene Structure 7962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01310.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGGGAGTTCCGGCGTTCTACCGGTGGTTGGCGGAGAAGTACCCGCTCGTGATCGTCGACGTGGTGGAAGAAGAGCCCGTCGTGATCGATGACGTATCGATTCCGGTCGACACCAGTAAACCAAATCCTAATGGGTTGGAATACGACAATCTGTATCTCGACATGAACGGGATTATTCACCCCTGTTTCCACCCAGAAGATAGGCCTTCTCCCTCGACCTTCGACGAGGTATTCCAGTGCATGTTTGATTACATTGACAGACTGTTTGTGATGGTTCGGCCTCGAAAGCTATTGTACATGGCGATTGATGGTGTTGCCCCCAGGGCAAAAATGAATCAACAGCGGTCTCGGCGATTTAGAGCTGCGAAAGATGCAGCAGACTCGGCAGCTGAAGAAGAAAGGCTGCGTGAGGAGTTTGAAATGGAGGGGAGAAAGCTTCCTCCCAAACAAGACTCACAAGTTGTTGATTCCAATGTCATCACTCCTGGAACTGAATTTATGGCTGTTCTGTCAGTAGCATTGCAGTATTACATCCATCTCAGATTAAACAATGACCCAGGATGGAAAAATGTTAAGGTTATTCTTTCTGATGCAAATGTTCCAGGTGAAGGCGAACACAAAATTATGTCCTATATTCGTCTTCAAAGAAATCTTCCTGGTTATGATCCAAATACACGCCATTGTCTGTATGGTTTGGATGCTGATTTGATTATGCTTGCTTTGGCTACCCATGAGGTTCATTTTTCAATTCTTCGAGAGGTTGTATTCACACCCGGACAGCAAGACAAATGCTTCATATGTGGTCAGGTGGGTCATTTAGCAGCAAATTGTGAAGGTAAGGCGAAACGGAAGGCTGGAGAGTTTGATGAGAAAGCTGATGGTGAGACTGTGCCCAAGAAGCCTTACCAGTTTCTTAACATCTGGACTCTTAGAGAATATTTGGAGTATGAGATGCGAATTCCCAACACCCCATTCGAGATTGATTTTGAGTGCATTGTGGATGATTTCATATTCATGTGCTTCTTTGTTGGTAACGATTTCTTGCCACACATGCCCACGCTGGAGATCCGTGAGGGTGCGATCAATTTGCTTTTGGCTGTATACAAGAAGGAATTTAAGGCATTGGGTGGATATCTGACTGATGGAAGCAAGCCGAATTTGAGTCGGGTAGAGCATTTCATTCAAGCAGTTGGATCTTATGAAGATAAAATATTTCAGAAAAGAGCTCGATTGCATCAGCGTCAGGCAGACAGAATAAAGCGTGATAAAAGGCAATTAAGAAGAGGAGATGATGCGGCGCCTCAAGTGCAACCAGATTCTTTGGTGCCAGTTTCTCGGTTTCAGGGATCTCGTCTTGCTTCGGGCCATACAGCTTCACCTTATCAACAGTCTGGAAAATCTAATGATCAAGGAAATCCTCGAAAGGTTGCACGTTTGTCTTCAGAGACGTCAACTGTTGGTGCTGCTATTGTTGAAGCTGAGGACAGTCTTGAACTAGATGAACATGGAAACAAAGAAGACTTGAAAGCAAAGCTGAAGGAGATTCTTCGTGAGAAATCTGATGCTTTTAACTCTGGAAATCCCGACGTAGACAAGGTTAAATTGGGAGAACCTGGATGGAAAGATAGGTATTACGAAGAAAAGTTTTCTGCAAACACTCCTGAAGAACGTGATGCAATTCGAAAAGATGTTGTTTTGCGGTACACTGAGGGTCTATGTTGGGTGATGCACTATTATTATGAAGGTGTTTGCTCGTGGCAGTGGTTTTACCCCTATCACTATGCACCCTTTGCTTCTGATCTGAAAGACCTTGGTCAGCTAAATATAAGTTTCGACTTGGGCTCTCCTTTTAAACCGTTCAATCAGCTATTGGGGGTTTTTCCTGCTGCAAGCTCCCATGCTCTTCCTGAGCAGTACAGGAAGTTGATGACTGATCCAAATTCACCTATCATTGACTTTTACCCTATTGACTTTGAAGTGGATATGAATGGGAAGCGGTACGCATGGCAGGGTATTGCAAAGTTGCCTTTTATTGATGAAGTCCGCCTTCTAGCTGAGGTTGAAAAACTCGAACATACATTGACGGAGGAGGAGACCCGGAGAAACAGTGTGATGTTTGAGATGCTTTTTGTTACATCGTCTCATCCTCTATCTGTATGCATATATTCTCTGGACAATCGATGTAAACAGTTGACAGACAAAGAGCGAGTTGAAGTCAAGGAGCAGATTGATCCCAAGTACAGTGAGGGGATGAACGGTTATCTGTCTCCATGTACTGGTGAGCCTTGCCCTCCGGTTTTCCGGTCTCCTGTTGACAGCATGGAGGATATTATGGACAACCAAGTAATATGTGCGATATACAGACTACCGGATGTACATAAGCATATAACTCGACCTCCGGCAGGTGTTATATTCCCGAAGAAGACTGTTACAGTGGGGGATGTGAAGCCTTTACCTCCGTTATGGCATGAAGAAACTGGGCGAAAGCCATGGCATGAAAATTCTGCGCGGACGCCATATGAAAACTCCCATTCCAGGCAGAACCCTGCAGGAGCTATTTCTGGAATACAGCTCGGGGCAGCGGCACATCGCCTTGTTGTTAATAGCTTACAGGCTAAAACGGATTCCAATGGGTATGGCAATCACATGCATTCCCATCGACCATCTTATGCCGAGCCTCAGTATTATCCACCGCATCCTTCCTATGCAAATAACGGAAGCTATGATCGGGGACACAGTAGAATGCCACCACCTAGGGCAATCCACCATCCTCAACATCAACCCCGAGCTTCGAATATTAGTACATTCCCAAGTCACAGTGACCGTGGGTATAATGTAGCGCATTCTTCAACGGCTGTCCACTTTCAGAACAGGCCTCACACTCAGCACCATGAAAGGAATTCTGGGCATGTATACTACGAATCAGGAAATCACCAGAACGGTGGGCCAATCTATCCTCAGAGACCTATTTTACAGACTCCGCCGGGAGTCGGCGGTGGTTCTTATCCAGGTGGCTATAACAACTATCAGAGTTACCAACCATCTGCAGCGTCTGGCCATCATGGTTATGATGACTGGGTTACACCGGTCGGCCATAACCCGGGCAGAGGATATGGCCGCCCTCAGCAATCCGGAAACCAATTCTCTGGATTGGACAGGAGAGGAAATAGGAGGCCACCTGCACCCCAGTATGGTTATGGCCACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0000967 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010586 GO:0010587 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0022613 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0071025 GO:0071027 GO:0071029 GO:0071035 GO:0071046 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 map03008 map03018

Pfam Domains

Protein Families

XRN_N zf-CCHC

Protein Analysis

1070

Amino Acids

121.43

Weight (kDa)

6.36

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75660 AT5G42540 AT5G42540
fragaria_vesca	FvH4_2g38700 FvH4_2g38700 FvH4_5g21470
malus_domestica	MD00G1128500.v1.1 MD08G1014700.v1.1 MD15G1014000.v1.1
prunus_persica	Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1
pyrus_communis	pycom08g01310 pycom15g01210
rosa_chinensis	RchiOBHm_Chr5g0009961 RchiOBHm_Chr6g0302611
rosa_laevigata	RLG00000011157 RLG00000031714
rosa_multiflora	Rmu_sc0027322.1_g000001 Rmu_sc0027323.1_g000001 Rmu_sc0039467.1_g000001 Rmu_sc0039989.1_g000001 Rmu_sc0041627.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066230 Rroxscaffold_7G00165520
rosa_rugosa	Rorug04G0447300 Rorug06G0315300 Rorug06G0315400
rosa_samantha	Rh5AG078800 Rh5BG073500 Rh5CG086100 Rh5DG074200 Rh5DG336700 Rh6AG428700 Rh6BG473800 Rh6CG441000 Rh6DG427700
rosa_wichuraiana	Rw6G037100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2393, 3187
AatII	GACGTC	1 cut(s)	1451
Acc36I	ACCTGC	2 cut(s)	2393, 3187
AccB1I	GGYRCC	2 cut(s)	1297, 1324
AccB7I	CCANNNNNTGG	1 cut(s)	2276
AccBSI	CCGCTC	1 cut(s)	46
AccI	GTMKAC	5 cut(s)	57, 108, 1101, 1590, 2913
AccII	CGCG	1 cut(s)	2509
AccIII	TCCGGA	1 cut(s)	3131
AclWI	GGATC	6 cut(s)	659, 1060, 1201, 1354, 1928, 2225
AcoI	YGGCCR	4 cut(s)	3055, 3091, 3115, 3199
AcsI	RAATTY	7 cut(s)	494, 957, 1112, 1156, 1939, 2500, 2899
AcuI	CTGAAG	4 cut(s)	411, 1425, 1556, 1683
AcyI	GRCGYC	3 cut(s)	1298, 1448, 2513
AfaI	GTAC	9 cut(s)	41, 296, 1703, 1916, 2000, 2240, 2275, 2376, 2803
AfiI	CCNNNNNNNGG	9 cut(s)	28, 608, 2276, 2402, 2535, 2990, 3100, 3107, 3191
AgeI	ACCGGT	2 cut(s)	21, 3085
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	8 cut(s)	320, 484, 556, 601, 655, 1612, 2534, 3007
AjuI	GAANNNNNNNTTGG	2 cut(s)	956, 988
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	8 cut(s)	351, 878, 1439, 2087, 2145, 2271, 2310, 2956
AlwI	GGATC	6 cut(s)	659, 1060, 1201, 1354, 1928, 2225
AlwNI	CAGNNNCTG	1 cut(s)	3053
Ama87I	CYCGRG	3 cut(s)	2573, 2784, 3100
Aor13HI	TCCGGA	1 cut(s)	3131
ApeKI	GCWGC	9 cut(s)	362, 374, 386, 403, 821, 1463, 1886, 2579, 3047
ApoI	RAATTY	7 cut(s)	494, 957, 1112, 1156, 1939, 2500, 2899
ArsI	GACNNNNNNTTYG	2 cut(s)	248, 280
AsiGI	ACCGGT	2 cut(s)	21, 3085
AspA2I	CCTAGG	1 cut(s)	2753
AspLEI	GCGC	3 cut(s)	1300, 2509, 2842
AspS9I	GGNCC	2 cut(s)	1363, 2945
AsuC2I	CCSGG	5 cut(s)	774, 2098, 2985, 3101, 3102
AsuHPI	GGTGA	8 cut(s)	170, 617, 893, 1368, 1735, 1935, 2291, 2924
AsuII	TTCGAA	2 cut(s)	1681, 2792
AvaI	CYCGRG	3 cut(s)	2573, 2784, 3100
AvrII	CCTAGG	1 cut(s)	2753
BaeGI	GKGCMC	1 cut(s)	894
BalI	TGGCCA	2 cut(s)	3057, 3201
BanI	GGYRCC	2 cut(s)	1297, 1324
BanII	GRGCYC	3 cut(s)	78, 1228, 1844
BauI	CACGAG	2 cut(s)	47, 1753
BbsI	GAAGAC	4 cut(s)	632, 1431, 1524, 2429
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	3 cut(s)	1479, 2055, 3123
BbvI	GCAGC	9 cut(s)	349, 386, 390, 398, 833, 1450, 1873, 2591, 3059
BceAI	ACGGC	1 cut(s)	2868
BcgI	CGANNNNNNTGC	8 cut(s)	363, 397, 1069, 1103, 2372, 2406, 2639, 2673
BciT130I	CCWGG	8 cut(s)	322, 486, 558, 603, 657, 1614, 2536, 3009
BclI	TGATCA	1 cut(s)	1405
BcnI	CCSGG	5 cut(s)	774, 2098, 2985, 3101, 3102
BcoDI	GTCTC	8 cut(s)	351, 878, 1439, 2087, 2145, 2271, 2310, 2956
BfaI	CTAG	3 cut(s)	1496, 2051, 2754
BfmI	CTRYAG	2 cut(s)	2547, 3045
BfoI	RGCGCY	1 cut(s)	1301
BfuAI	ACCTGC	2 cut(s)	2393, 3187
BglI	GCCNNNNNGGC	1 cut(s)	323
BlnI	CCTAGG	1 cut(s)	2753
BmeT110I	CYCGRG	3 cut(s)	2573, 2784, 3100
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	2 cut(s)	1363, 2945
BmiI	GGNNCC	2 cut(s)	1299, 1326
BmrI	ACTGGG	3 cut(s)	2487, 3085, 3181
BmuI	ACTGGG	3 cut(s)	2487, 3085, 3181
BoxI	GACNNNNGTC	1 cut(s)	1812
BpiI	GAAGAC	4 cut(s)	632, 1431, 1524, 2429
BpmI	CTGGAG	2 cut(s)	876, 1082
Bpu10I	CCTNAGC	4 cut(s)	1479, 1908, 2055, 3123
Bpu14I	TTCGAA	2 cut(s)	1681, 2792
BpuEI	CTTGAG	1 cut(s)	1287
BpuMI	CCSGG	5 cut(s)	774, 2098, 2985, 3101, 3102
Bsa29I	ATCGAT	3 cut(s)	87, 98, 2179
BsaHI	GRCGYC	3 cut(s)	1298, 1448, 2513
BsaI	GGTCTC	4 cut(s)	351, 2087, 2310, 2956
BsaJI	CCNNGG	8 cut(s)	320, 321, 556, 1810, 2489, 2753, 2824, 3100
BsaWI	WCCGGW	7 cut(s)	21, 103, 2293, 2301, 2368, 3085, 3131
BsaXI	ACNNNNNCTCC	4 cut(s)	2092, 2122, 2380, 2410
Bsc4I	CCNNNNNNNGG	9 cut(s)	28, 608, 2276, 2402, 2535, 2990, 3100, 3107, 3191
Bse118I	RCCGGY	2 cut(s)	21, 3085
Bse1I	ACTGG	8 cut(s)	114, 235, 907, 1328, 2281, 2482, 3080, 3187
Bse3DI	GCAATG	1 cut(s)	518
BseAI	TCCGGA	1 cut(s)	3131
BseBI	CCWGG	8 cut(s)	322, 486, 558, 603, 657, 1614, 2536, 3009
BseCI	ATCGAT	3 cut(s)	87, 98, 2179
BseDI	CCNNGG	8 cut(s)	320, 321, 556, 1810, 2489, 2753, 2824, 3100
BseLI	CCNNNNNNNGG	9 cut(s)	28, 608, 2276, 2402, 2535, 2990, 3100, 3107, 3191
BseMI	GCAATG	1 cut(s)	518
BseMII	CTCAG	9 cut(s)	553, 1470, 1698, 1899, 2046, 2693, 2897, 2972, 3137
BseNI	ACTGG	8 cut(s)	114, 235, 907, 1328, 2281, 2482, 3080, 3187
BseRI	GAGGAG	4 cut(s)	425, 1299, 2102, 2105
BseSI	GKGCMC	1 cut(s)	894
BseXI	GCAGC	9 cut(s)	349, 386, 390, 398, 833, 1450, 1873, 2591, 3059
BsgI	GTGCAG	1 cut(s)	3165
Bsh1236I	CGCG	1 cut(s)	2509
Bsh1285I	CGRYCG	2 cut(s)	108, 3090
BshNI	GGYRCC	2 cut(s)	1297, 1324
BshTI	ACCGGT	2 cut(s)	21, 3085
BshVI	ATCGAT	3 cut(s)	87, 98, 2179
BsiEI	CGRYCG	2 cut(s)	108, 3090
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	3 cut(s)	2573, 2784, 3100
BslFI	GGGAC	1 cut(s)	2745
BslI	CCNNNNNNNGG	9 cut(s)	28, 608, 2276, 2402, 2535, 2990, 3100, 3107, 3191
BsmAI	GTCTC	8 cut(s)	351, 878, 1439, 2087, 2145, 2271, 2310, 2956
BsmBI	CGTCTC	2 cut(s)	1439, 2145
BsmFI	GGGAC	1 cut(s)	2745
BsmI	GAATGC	3 cut(s)	2650, 2748, 2842
Bso31I	GGTCTC	4 cut(s)	351, 2087, 2310, 2956
BsoBI	CYCGRG	3 cut(s)	2573, 2784, 3100
Bsp119I	TTCGAA	2 cut(s)	1681, 2792
Bsp1286I	GDGCHC	4 cut(s)	78, 894, 1228, 1844
Bsp13I	TCCGGA	1 cut(s)	3131
Bsp1407I	TGTACA	2 cut(s)	294, 2374
Bsp19I	CCATGG	1 cut(s)	2489
BspCNI	CTCAG	9 cut(s)	552, 1471, 1699, 1900, 2047, 2692, 2896, 2971, 3136
BspDI	ATCGAT	3 cut(s)	87, 98, 2179
BspEI	TCCGGA	1 cut(s)	3131
BspFNI	CGCG	1 cut(s)	2509
BspLI	GGNNCC	2 cut(s)	1299, 1326
BspMAI	CTGCAG	2 cut(s)	2551, 3049
BspMI	ACCTGC	2 cut(s)	2393, 3187
BspPI	GGATC	6 cut(s)	659, 1060, 1201, 1354, 1928, 2225
BspQI	GCTCTTC	2 cut(s)	66, 1908
BspT104I	TTCGAA	2 cut(s)	1681, 2792
BspT107I	GGYRCC	2 cut(s)	1297, 1324
BspTNI	GGTCTC	4 cut(s)	351, 2087, 2310, 2956
BsrBI	CCGCTC	1 cut(s)	46
BsrDI	GCAATG	1 cut(s)	518
BsrFI	RCCGGY	2 cut(s)	21, 3085
BsrGI	TGTACA	2 cut(s)	294, 2374
BsrI	ACTGG	8 cut(s)	114, 235, 907, 1328, 2281, 2482, 3080, 3187
BssAI	RCCGGY	2 cut(s)	21, 3085
BssECI	CCNNGG	8 cut(s)	320, 321, 556, 1810, 2489, 2753, 2824, 3100
BssNAI	GTATAC	2 cut(s)	1102, 2914
BssNI	GRCGYC	3 cut(s)	1298, 1448, 2513
BssSI	CACGAG	2 cut(s)	47, 1753
BssT1I	CCWWGG	3 cut(s)	1810, 2489, 2753
Bst1107I	GTATAC	2 cut(s)	1102, 2914
Bst2BI	CACGAG	2 cut(s)	47, 1753
Bst2UI	CCWGG	8 cut(s)	322, 486, 558, 603, 657, 1614, 2536, 3009
Bst6I	CTCTTC	3 cut(s)	66, 1276, 1908
BstACI	GRCGYC	3 cut(s)	1298, 1448, 2513
BstAPI	GCANNNNNTGC	1 cut(s)	1790
BstAUI	TGTACA	2 cut(s)	294, 2374
BstBI	TTCGAA	2 cut(s)	1681, 2792
BstC8I	GCNNGC	3 cut(s)	717, 1151, 1891
BstDSI	CCRYGG	2 cut(s)	2489, 2824
BstENI	CCTNNNNNAGG	1 cut(s)	2400
BstFNI	CGCG	1 cut(s)	2509
BstH2I	RGCGCY	1 cut(s)	1301
BstHHI	GCGC	3 cut(s)	1300, 2509, 2842
BstMAI	GTCTC	8 cut(s)	351, 878, 1439, 2087, 2145, 2271, 2310, 2956
BstMCI	CGRYCG	2 cut(s)	108, 3090
BstMWI	GCNNNNNNNGC	9 cut(s)	286, 323, 349, 371, 383, 898, 1051, 1306, 1790
BstNI	CCWGG	8 cut(s)	322, 486, 558, 603, 657, 1614, 2536, 3009
BstNSI	RCATGY	4 cut(s)	244, 1054, 2650, 2912
BstPAI	GACNNNNGTC	1 cut(s)	1812
BstSFI	CTRYAG	2 cut(s)	2547, 3045
BstSLI	GKGCMC	1 cut(s)	894
BstUI	CGCG	1 cut(s)	2509
BstV1I	GCAGC	9 cut(s)	349, 386, 390, 398, 833, 1450, 1873, 2591, 3059
BstV2I	GAAGAC	4 cut(s)	632, 1431, 1524, 2429
BstX2I	RGATCY	3 cut(s)	1065, 1193, 1346
BstXI	CCANNNNNNTGG	2 cut(s)	2942, 3146
BstYI	RGATCY	3 cut(s)	1065, 1193, 1346
BstZ17I	GTATAC	2 cut(s)	1102, 2914
Bsu15I	ATCGAT	3 cut(s)	87, 98, 2179
BsuTUI	ATCGAT	3 cut(s)	87, 98, 2179
BtgI	CCRYGG	2 cut(s)	2489, 2824
BtgZI	GCGATG	1 cut(s)	2573
BtrI	CACGTC	1 cut(s)	61
BtsI	GCAGTG	1 cut(s)	1766
BtsIMutI	CAGTG	7 cut(s)	242, 1704, 1766, 2113, 2248, 2439, 2824
BveI	ACCTGC	2 cut(s)	2393, 3187
Cac8I	GCNNGC	3 cut(s)	717, 1151, 1891
CaiI	CAGNNNCTG	1 cut(s)	3053
CfoI	GCGC	3 cut(s)	1300, 2509, 2842
Cfr10I	RCCGGY	2 cut(s)	21, 3085
Cfr13I	GGNCC	2 cut(s)	1363, 2945
Cfr9I	CCCGGG	1 cut(s)	3100
ClaI	ATCGAT	3 cut(s)	87, 98, 2179
CseI	GACGC	3 cut(s)	1229, 2521, 3039
Csp6I	GTAC	9 cut(s)	40, 295, 1702, 1915, 1999, 2239, 2274, 2375, 2802
CspAI	ACCGGT	2 cut(s)	21, 3085
CviQI	GTAC	9 cut(s)	40, 295, 1702, 1915, 1999, 2239, 2274, 2375, 2802
DinI	GGCGCC	1 cut(s)	1299
DraI	TTTAAA	1 cut(s)	1852
EaeI	YGGCCR	4 cut(s)	3055, 3091, 3115, 3199
Eam1104I	CTCTTC	3 cut(s)	66, 1276, 1908
EarI	CTCTTC	3 cut(s)	66, 1276, 1908
EciI	GGCGGA	3 cut(s)	47, 2033, 2970
Ecl136II	GAGCTC	1 cut(s)	1226
Eco130I	CCWWGG	3 cut(s)	1810, 2489, 2753
Eco147I	AGGCCT	2 cut(s)	205, 2875
Eco24I	GRGCYC	3 cut(s)	78, 1228, 1844
Eco31I	GGTCTC	4 cut(s)	351, 2087, 2310, 2956
Eco32I	GATATC	1 cut(s)	1133
Eco53kI	GAGCTC	1 cut(s)	1226
Eco57I	CTGAAG	4 cut(s)	411, 1425, 1556, 1683
Eco88I	CYCGRG	3 cut(s)	2573, 2784, 3100
EcoICRI	GAGCTC	1 cut(s)	1226
EcoNI	CCTNNNNNAGG	1 cut(s)	2400
EcoRI	GAATTC	2 cut(s)	957, 2899
EcoRII	CCWGG	8 cut(s)	320, 484, 556, 601, 655, 1612, 2534, 3007
EcoRV	GATATC	1 cut(s)	1133
EcoT14I	CCWWGG	3 cut(s)	1810, 2489, 2753
EcoT22I	ATGCAT	2 cut(s)	2162, 2652
EcoT38I	GRGCYC	3 cut(s)	78, 1228, 1844
EgeI	GGCGCC	1 cut(s)	1299
EheI	GGCGCC	1 cut(s)	1299
ErhI	CCWWGG	3 cut(s)	1810, 2489, 2753
Esp3I	CGTCTC	2 cut(s)	1439, 2145
FalI	AAGNNNNNCTT	2 cut(s)	2031, 2063
FaqI	GGGAC	1 cut(s)	2745
FauI	CCCGC	1 cut(s)	51
FauNDI	CATATG	2 cut(s)	797, 2518
FbaI	TGATCA	1 cut(s)	1405
FblI	GTMKAC	5 cut(s)	57, 108, 1101, 1590, 2913
FriOI	GRGCYC	3 cut(s)	78, 1228, 1844
FspBI	CTAG	3 cut(s)	1496, 2051, 2754
GlaI	GCGC	3 cut(s)	1299, 2508, 2841
GsuI	CTGGAG	2 cut(s)	876, 1082
HaeII	RGCGCY	1 cut(s)	1301
HgaI	GACGC	3 cut(s)	1229, 2521, 3039
HhaI	GCGC	3 cut(s)	1300, 2509, 2842
Hin1I	GRCGYC	3 cut(s)	1298, 1448, 2513
Hin6I	GCGC	3 cut(s)	1298, 2507, 2840
HinP1I	GCGC	3 cut(s)	1298, 2507, 2840
HincII	GTYRAC	5 cut(s)	58, 109, 1452, 2193, 2314
HindII	GTYRAC	5 cut(s)	58, 109, 1452, 2193, 2314
HindIII	AAGCTT	1 cut(s)	434
HphI	GGTGA	8 cut(s)	170, 617, 893, 1368, 1735, 1935, 2291, 2924
Hpy99I	CGWCG	5 cut(s)	59, 62, 83, 227, 1589
HpyCH4IV	ACGT	6 cut(s)	60, 93, 1432, 1448, 1587, 1669
HpyF10VI	GCNNNNNNNGC	9 cut(s)	286, 323, 349, 371, 383, 898, 1051, 1306, 1790
HpySE526I	ACGT	6 cut(s)	60, 93, 1432, 1448, 1587, 1669
Hsp92I	GRCGYC	3 cut(s)	1298, 1448, 2513
HspAI	GCGC	3 cut(s)	1298, 2507, 2840
KasI	GGCGCC	1 cut(s)	1297
Kpn2I	TCCGGA	1 cut(s)	3131
Ksp22I	TGATCA	1 cut(s)	1405
LguI	GCTCTTC	2 cut(s)	66, 1908
LmnI	GCTCC	3 cut(s)	1898, 2221, 2552
Lsp1109I	GCAGC	9 cut(s)	349, 386, 390, 398, 833, 1450, 1873, 2591, 3059
MaeI	CTAG	3 cut(s)	1496, 2051, 2754
MaeII	ACGT	6 cut(s)	60, 93, 1432, 1448, 1587, 1669
MaeIII	GTNAC	7 cut(s)	1031, 2131, 2428, 2813, 2819, 3032, 3079
MbiI	CCGCTC	1 cut(s)	46
MflI	RGATCY	3 cut(s)	1065, 1193, 1346
MhlI	GDGCHC	4 cut(s)	78, 894, 1228, 1844
MlsI	TGGCCA	2 cut(s)	3057, 3201
MluNI	TGGCCA	2 cut(s)	3057, 3201
Mly113I	GGCGCC	1 cut(s)	1298
MlyI	GAGTC	6 cut(s)	374, 446, 919, 1171, 2971, 2997
MmeI	TCCRAC	2 cut(s)	117, 1171
Mox20I	TGGCCA	2 cut(s)	3057, 3201
Mph1103I	ATGCAT	2 cut(s)	2162, 2652
MroI	TCCGGA	1 cut(s)	3131
MscI	TGGCCA	2 cut(s)	3057, 3201
MseI	TTAA	9 cut(s)	545, 573, 915, 1116, 1277, 1569, 1599, 1851, 2601
MslI	CAYNNNNRTG	2 cut(s)	1013, 3066
Msp20I	TGGCCA	2 cut(s)	3057, 3201
MspA1I	CMGCKG	3 cut(s)	343, 389, 2582
Mva1269I	GAATGC	3 cut(s)	2650, 2748, 2842
MvaI	CCWGG	8 cut(s)	322, 486, 558, 603, 657, 1614, 2536, 3009
MvnI	CGCG	1 cut(s)	2509
MwoI	GCNNNNNNNGC	9 cut(s)	286, 323, 349, 371, 383, 898, 1051, 1306, 1790
NarI	GGCGCC	1 cut(s)	1298
NciI	CCSGG	5 cut(s)	774, 2098, 2985, 3101, 3102
NcoI	CCATGG	1 cut(s)	2489
NdeI	CATATG	2 cut(s)	797, 2518
NlaIV	GGNNCC	2 cut(s)	1299, 1326
NmeAIII	GCCGAG	3 cut(s)	328, 362, 2698
NmuCI	GTSAC	2 cut(s)	2813, 2819
NsiI	ATGCAT	2 cut(s)	2162, 2652
NspI	RCATGY	4 cut(s)	244, 1054, 2650, 2912
NspV	TTCGAA	2 cut(s)	1681, 2792
PaqCI	CACCTGC	2 cut(s)	2393, 3187
PasI	CCCWGGG	1 cut(s)	321
PceI	AGGCCT	2 cut(s)	205, 2875
PciSI	GCTCTTC	2 cut(s)	66, 1908
PcsI	WCGNNNNNNNCGW	1 cut(s)	54
PctI	GAATGC	3 cut(s)	2650, 2748, 2842
PfeI	GAWTC	7 cut(s)	100, 334, 467, 1316, 1543, 2624, 2921
PflMI	CCANNNNNTGG	1 cut(s)	2276
PfoI	TCCNGGA	1 cut(s)	484
PinAI	ACCGGT	2 cut(s)	21, 3085
PleI	GAGTC	6 cut(s)	374, 446, 919, 1170, 2971, 2996
PluTI	GGCGCC	1 cut(s)	1301
PpsI	GAGTC	6 cut(s)	374, 446, 919, 1170, 2971, 2996
PshAI	GACNNNNGTC	1 cut(s)	1812
Psp124BI	GAGCTC	1 cut(s)	1228
Psp6I	CCWGG	8 cut(s)	320, 484, 556, 601, 655, 1612, 2534, 3007
PspGI	CCWGG	8 cut(s)	320, 484, 556, 601, 655, 1612, 2534, 3007
PspN4I	GGNNCC	2 cut(s)	1299, 1326
PspPI	GGNCC	2 cut(s)	1363, 2945
PstI	CTGCAG	2 cut(s)	2551, 3049
PstNI	CAGNNNCTG	1 cut(s)	3053
PsuI	RGATCY	3 cut(s)	1065, 1193, 1346
PvuII	CAGCTG	1 cut(s)	389
RsaI	GTAC	9 cut(s)	41, 296, 1703, 1916, 2000, 2240, 2275, 2376, 2803
RsaNI	GTAC	9 cut(s)	40, 295, 1702, 1915, 1999, 2239, 2274, 2375, 2802
RseI	CAYNNNNRTG	2 cut(s)	1013, 3066
SacI	GAGCTC	1 cut(s)	1228
SalI	GTCGAC	2 cut(s)	56, 107
SapI	GCTCTTC	2 cut(s)	66, 1908
SaqAI	TTAA	9 cut(s)	545, 573, 915, 1116, 1277, 1569, 1599, 1851, 2601
Sau96I	GGNCC	2 cut(s)	1363, 2945
SbfI	CCTGCAGG	1 cut(s)	2551
SchI	GAGTC	6 cut(s)	374, 446, 919, 1171, 2971, 2997
SdaI	CCTGCAGG	1 cut(s)	2551
SduI	GDGCHC	4 cut(s)	78, 894, 1228, 1844
SfcI	CTRYAG	2 cut(s)	2547, 3045
SfoI	GGCGCC	1 cut(s)	1299
SfuI	TTCGAA	2 cut(s)	1681, 2792
SgrDI	CGTCGACG	1 cut(s)	56
SmaI	CCCGGG	1 cut(s)	3102
SmiMI	CAYNNNNRTG	2 cut(s)	1013, 3066
SmlI	CTYRAG	1 cut(s)	1302
SmoI	CTYRAG	1 cut(s)	1302
Sse8387I	CCTGCAGG	1 cut(s)	2551
SseBI	AGGCCT	2 cut(s)	205, 2875
SspDI	GGCGCC	1 cut(s)	1297
SspI	AATATT	3 cut(s)	938, 1212, 2797
SspMI	CTAG	3 cut(s)	1496, 2051, 2754
SstI	GAGCTC	1 cut(s)	1228
StuI	AGGCCT	2 cut(s)	205, 2875
StyI	CCWWGG	3 cut(s)	1810, 2489, 2753
TaiI	ACGT	6 cut(s)	63, 96, 1435, 1451, 1590, 1672
TatI	WGTACW	6 cut(s)	294, 1914, 2238, 2273, 2374, 2801
TauI	GCSGC	3 cut(s)	1298, 2585, 3120
TfiI	GAWTC	7 cut(s)	100, 334, 467, 1316, 1543, 2624, 2921
Tru1I	TTAA	9 cut(s)	545, 573, 915, 1116, 1277, 1569, 1599, 1851, 2601
Tru9I	TTAA	9 cut(s)	545, 573, 915, 1116, 1277, 1569, 1599, 1851, 2601
TscAI	CASTG	7 cut(s)	242, 1711, 1766, 2113, 2248, 2439, 2824
TseFI	GTSAC	2 cut(s)	2813, 2819
TseI	GCWGC	9 cut(s)	362, 374, 386, 403, 821, 1463, 1886, 2579, 3047
Tsp45I	GTSAC	2 cut(s)	2813, 2819
TspGWI	ACGGA	6 cut(s)	862, 1058, 2099, 2448, 2636, 2730
TspMI	CCCGGG	1 cut(s)	3100
TspRI	CASTG	7 cut(s)	242, 1711, 1766, 2113, 2248, 2439, 2824
Van91I	CCANNNNNTGG	1 cut(s)	2276
XagI	CCTNNNNNAGG	1 cut(s)	2400
XapI	RAATTY	7 cut(s)	494, 957, 1112, 1156, 1939, 2500, 2899
XceI	RCATGY	4 cut(s)	244, 1054, 2650, 2912
XcmI	CCANNNNNNNNNTGG	2 cut(s)	686, 3194
XmaI	CCCGGG	1 cut(s)	3100
XmaJI	CCTAGG	1 cut(s)	2753
XmiI	GTMKAC	5 cut(s)	57, 108, 1101, 1590, 2913
XspI	CTAG	3 cut(s)	1496, 2051, 2754
ZraI	GACGTC	1 cut(s)	1449
Zsp2I	ATGCAT	2 cut(s)	2162, 2652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.