Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0027322.1

Orthogroup ID

OG0002185

Physical Location & Seq

Genomic Coordinates Forward (+)

6 .. 2024

Gene Structure 2019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0027322.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

atgcggaatattcccaattccccatttgagattgatcttgagcgcattgtggatgatttcatattcatttgttttttcgttggaaacgatttcctgccacatatgcctactctggagattcgtgagggtgcaatcaacttgcttatggctgtatacaaaaaggaatttcatgcactgggtggatatttgactgattcaagcaagctgaatttgagtcgggtggagcatttcattcaggcagttggttgttatgaagacaaaatattccagaaacgagctcaattacatcagcggcaggcacaaagaataaagcgtgccaaggtgcaagttccccaagttcagccagattctttagttgcagttaatcgatttcaaggttctcgtcttgcttcaggtccttctcctgcaccctatcaacagtattgtagatcatctggtagaggaaatcctgaaaaagttgcacgcttttcttcagaggcatcaagtattggtgctgctattgttgaagctgagaacagcagtactctagatgttgaagtacatgaaaataaagaagatttaaaagcaaagctcaaagagattcttcgtgagaaatccgatgcttttaactctagaaatccccaagaagaagacaaggttaaattgggagaacctggatggagggataggtattatgaagaaaagttttgtgcaaaaactcaagaagaacgtgaagcagtttgtaaagatgttatcttgcgatacacagaaggcttgtgttgggtgatgaactattattatgaaggggtttgttcatgggagtggttttacccctatcattatgcaccctttgcttctgatctcaaggacctaggtcagctaaagataagcttcaatttgggcactccctttaaacccttcaatcagctgttgggggttttcccagctgcaagcgcccatgcccttcctgaacaatacagaaagttaatgactgatccaaactcgcctattattgacttttaccctactaactttgaagtggatatgaatgggaaacggtatgcatggcagggtattgcaaaattgcccttcattgaccaaggtcgtcttctttctgaggttgagaaaattgaacacacattgacagaggaggaaacccggagaaactccatgatgtttgagatgctctttgtttcatcttctcatcctctctctgtatgcatataccttcttgacgattgttgtagacagttgacagagaaagatcgagttgaggttaaggaacaaattgatcccaaatacagtgaagggatgaatggttatctatcttcatgtgctggagagtcttgtcctcctgtttttcggtctcctgttaaatgcatggaggatatcatggacaaccaagtcatctgtgcaatatataggctaccagaagtacataagcatataactcgaccgcctgcaggtgttattttccccaagaagactgtgacggtgggggatctgaagcctgcacctgttttatggcatgaagattctgggcggaacccccttggaaccacttcgcaaagacagcttggggatgccgcacatcgactggttgttaatagcttacaggtgaaggtagacaacattagctatggcaatcaaatgcaggcccttcgaccactatctcatgcggggcctcaatattacccaccacacccttcgtacaatgatcagggactacttggaatgccactacctagaacatttcagcatcctcaaggtcagcacaaccgaaattcaagtttcactagtgatcggcattcatcatcagctgtgtataacgctcagaataggtctccttctcaacatcatgccaggggttctgggcacgcttactatcaatcaggaaggcatcagaatggtgggctcatttaccctcagatacctattacacaagctccttcaggtttgagacctggtccttctcaaggtgtttataacaagtatcagagtaaccagccatctggagcacctcgttatcaaagattttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0000967 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004534 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008409 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010586 GO:0010587 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019222 GO:0019439 GO:0022613 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0043633 GO:0043634 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0071025 GO:0071027 GO:0071029 GO:0071035 GO:0071046 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03008 ko03018 map03008 map03018

Pfam Domains

Protein Families

XRN_N zf-CCHC

Protein Analysis

672

Amino Acids

76.38

Weight (kDa)

7.86

Isoelectric Point (pI)

50.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002185)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75660 AT5G42540 AT5G42540
fragaria_vesca	FvH4_2g38700 FvH4_2g38700 FvH4_5g21470
malus_domestica	MD00G1128500.v1.1 MD08G1014700.v1.1 MD15G1014000.v1.1
prunus_persica	Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1 Prupe.1G367600_v2.0.a1
pyrus_communis	pycom08g01310 pycom15g01210
rosa_chinensis	RchiOBHm_Chr5g0009961 RchiOBHm_Chr6g0302611
rosa_laevigata	RLG00000011157 RLG00000031714
rosa_multiflora	Rmu_sc0027322.1_g000001 Rmu_sc0027323.1_g000001 Rmu_sc0039467.1_g000001 Rmu_sc0039989.1_g000001 Rmu_sc0041627.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066230 Rroxscaffold_7G00165520
rosa_rugosa	Rorug04G0447300 Rorug06G0315300 Rorug06G0315400
rosa_samantha	Rh5AG078800 Rh5BG073500 Rh5CG086100 Rh5DG074200 Rh5DG336700 Rh6AG428700 Rh6BG473800 Rh6CG441000 Rh6DG427700
rosa_wichuraiana	Rw6G037100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1965
AarI	CACCTGC	1 cut(s)	1433
AasI	GACNNNNNNGTC	1 cut(s)	1382
Acc36I	ACCTGC	1 cut(s)	1433
AccI	GTMKAC	3 cut(s)	153, 1225, 1605
AciI	CCGC	6 cut(s)	4, 292, 1436, 1522, 1566, 1658
AclWI	GGATC	3 cut(s)	968, 1265, 1488
AcsI	RAATTY	3 cut(s)	164, 208, 1762
AcuI	CTGAAG	4 cut(s)	375, 456, 1505, 1914
AdeI	CACNNNGTG	1 cut(s)	179
AfaI	GTAC	4 cut(s)	523, 540, 1416, 1691
AfiI	CCNNNNNNNGG	2 cut(s)	1442, 1955
AgsI	TTSAA	9 cut(s)	198, 374, 506, 536, 874, 901, 1016, 1112, 1767
AhlI	ACTAGT	1 cut(s)	1775
AjnI	CCWGG	3 cut(s)	652, 1841, 1942
AjuI	GAANNNNNNNTTGG	2 cut(s)	1071, 1103
Alw21I	GWGCWC	2 cut(s)	280, 1999
Alw26I	GTCTC	3 cut(s)	1350, 1827, 1933
AlwI	GGATC	3 cut(s)	968, 1265, 1488
AoxI	GGCC	2 cut(s)	1635, 1661
ApeKI	GCWGC	2 cut(s)	494, 926
ApoI	RAATTY	3 cut(s)	164, 208, 1762
Asp700I	GAANNNNTTC	1 cut(s)	1540
AspA2I	CCTAGG	1 cut(s)	850
AspLEI	GCGC	2 cut(s)	45, 935
AspS9I	GGNCC	5 cut(s)	395, 847, 1636, 1661, 1946
AsuC2I	CCSGG	1 cut(s)	1138
AsuHPI	GGTGA	2 cut(s)	775, 1609
AvaII	GGWCC	3 cut(s)	395, 847, 1946
AvrII	CCTAGG	1 cut(s)	850
BaeGI	GKGCMC	2 cut(s)	884, 1857
BanII	GRGCYC	2 cut(s)	280, 1896
BbsI	GAAGAC	4 cut(s)	261, 636, 1079, 1469
Bbv12I	GWGCWC	2 cut(s)	280, 1999
BbvI	GCAGC	2 cut(s)	481, 913
BccI	CCATC	2 cut(s)	651, 1996
BcgI	CGANNNNNNTGC	4 cut(s)	1412, 1446, 1622, 1656
BciT130I	CCWGG	3 cut(s)	654, 1843, 1944
BclI	TGATCA	1 cut(s)	1696
BcnI	CCSGG	1 cut(s)	1138
BcoDI	GTCTC	3 cut(s)	1350, 1827, 1933
BcuI	ACTAGT	1 cut(s)	1775
BfaI	CTAG	5 cut(s)	527, 612, 851, 1725, 1776
BfmI	CTRYAG	1 cut(s)	1440
BfoI	RGCGCY	1 cut(s)	936
BfuAI	ACCTGC	1 cut(s)	1433
BisI	GCNGC	4 cut(s)	293, 495, 927, 1566
BlnI	CCTAGG	1 cut(s)	850
BlsI	GCNGC	4 cut(s)	294, 496, 928, 1567
BmcAI	AGTACT	1 cut(s)	523
Bme1390I	CCNGG	4 cut(s)	654, 1138, 1843, 1944
Bme18I	GGWCC	3 cut(s)	395, 847, 1946
BmgT120I	GGNCC	5 cut(s)	395, 847, 1636, 1661, 1946
BmiI	GGNNCC	3 cut(s)	1526, 1537, 1662
BmrFI	CCNGG	4 cut(s)	654, 1138, 1843, 1944
BmrI	ACTGGG	1 cut(s)	185
BmsI	GCATC	6 cut(s)	488, 589, 1152, 1552, 1747, 1888
BmuI	ACTGGG	1 cut(s)	185
BoxI	GACNNNNGTC	2 cut(s)	852, 1080
BpiI	GAAGAC	4 cut(s)	261, 636, 1079, 1469
BpmI	CTGGAG	3 cut(s)	134, 1338, 2013
BpuEI	CTTGAG	5 cut(s)	59, 684, 827, 1728, 1938
BpuMI	CCSGG	1 cut(s)	1138
Bsa29I	ATCGAT	1 cut(s)	367
BsaI	GGTCTC	3 cut(s)	1350, 1827, 1933
BsaJI	CCNNGG	5 cut(s)	318, 850, 1078, 1531, 1842
BsaXI	ACNNNNNCTCC	2 cut(s)	1909, 1939
Bsc4I	CCNNNNNNNGG	2 cut(s)	1442, 1955
Bse1I	ACTGG	2 cut(s)	180, 1581
BseBI	CCWGG	3 cut(s)	654, 1843, 1944
BseCI	ATCGAT	1 cut(s)	367
BseDI	CCNNGG	5 cut(s)	318, 850, 1078, 1531, 1842
BseGI	GGATG	6 cut(s)	58, 662, 1183, 1296, 1567, 1738
BseLI	CCNNNNNNNGG	2 cut(s)	1442, 1955
BseMII	CTCAG	4 cut(s)	501, 1086, 1826, 1919
BseNI	ACTGG	2 cut(s)	180, 1581
BseRI	GAGGAG	1 cut(s)	1142
BseSI	GKGCMC	2 cut(s)	884, 1857
BseXI	GCAGC	2 cut(s)	481, 913
BseYI	CCCAGC	1 cut(s)	922
BsgI	GTGCAG	2 cut(s)	390, 1476
Bsh1285I	CGRYCG	1 cut(s)	1436
BshFI	GGCC	2 cut(s)	1637, 1663
BshVI	ATCGAT	1 cut(s)	367
BsiEI	CGRYCG	1 cut(s)	1436
BsiHKAI	GWGCWC	2 cut(s)	280, 1999
BsiSI	CCGG	1 cut(s)	1138
BslFI	GGGAC	1 cut(s)	1716
BslI	CCNNNNNNNGG	2 cut(s)	1442, 1955
BsmAI	GTCTC	3 cut(s)	1350, 1827, 1933
BsmFI	GGGAC	1 cut(s)	1716
BsmI	GAATGC	2 cut(s)	1719, 1786
BsnI	GGCC	2 cut(s)	1637, 1663
Bso31I	GGTCTC	3 cut(s)	1350, 1827, 1933
Bsp1286I	GDGCHC	5 cut(s)	280, 884, 1857, 1896, 1999
Bsp143I	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
BspACI	CCGC	6 cut(s)	4, 292, 1436, 1522, 1566, 1658
BspANI	GGCC	2 cut(s)	1637, 1663
BspCNI	CTCAG	4 cut(s)	502, 1087, 1825, 1918
BspDI	ATCGAT	1 cut(s)	367
BspLI	GGNNCC	3 cut(s)	1526, 1537, 1662
BspMAI	CTGCAG	1 cut(s)	1444
BspMI	ACCTGC	1 cut(s)	1433
BspPI	GGATC	3 cut(s)	968, 1265, 1488
BspTNI	GGTCTC	3 cut(s)	1350, 1827, 1933
BsrI	ACTGG	2 cut(s)	180, 1581
BssECI	CCNNGG	5 cut(s)	318, 850, 1078, 1531, 1842
BssMI	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
BssNAI	GTATAC	1 cut(s)	154
BssT1I	CCWWGG	4 cut(s)	318, 850, 1078, 1531
Bst1107I	GTATAC	1 cut(s)	154
Bst2UI	CCWGG	3 cut(s)	654, 1843, 1944
Bst4CI	ACNGT	6 cut(s)	420, 1038, 1230, 1283, 1468, 1474
BstAPI	GCANNNNNTGC	1 cut(s)	830
BstC8I	GCNNGC	9 cut(s)	203, 297, 315, 463, 931, 1440, 1491, 1635, 1857
BstDEI	CTNAG	4 cut(s)	510, 1095, 1812, 1905
BstENI	CCTNNNNNAGG	1 cut(s)	1953
BstF5I	GGATG	6 cut(s)	58, 662, 1183, 1296, 1567, 1738
BstH2I	RGCGCY	1 cut(s)	936
BstHHI	GCGC	2 cut(s)	45, 935
BstKTI	GATC	9 cut(s)	37, 431, 841, 976, 1246, 1273, 1483, 1699, 1783
BstMAI	GTCTC	3 cut(s)	1350, 1827, 1933
BstMBI	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
BstMCI	CGRYCG	1 cut(s)	1436
BstMWI	GCNNNNNNNGC	4 cut(s)	103, 830, 932, 1552
BstNI	CCWGG	3 cut(s)	654, 1843, 1944
BstPAI	GACNNNNGTC	2 cut(s)	852, 1080
BstSCI	CCNGG	4 cut(s)	652, 1136, 1841, 1942
BstSFI	CTRYAG	1 cut(s)	1440
BstSLI	GKGCMC	2 cut(s)	884, 1857
BstV1I	GCAGC	2 cut(s)	481, 913
BstV2I	GAAGAC	4 cut(s)	261, 636, 1079, 1469
BstX2I	RGATCY	1 cut(s)	1480
BstXI	CCANNNNNNTGG	1 cut(s)	1991
BstYI	RGATCY	1 cut(s)	1480
BstZ17I	GTATAC	1 cut(s)	154
Bsu15I	ATCGAT	1 cut(s)	367
BsuRI	GGCC	2 cut(s)	1637, 1663
BsuTUI	ATCGAT	1 cut(s)	367
BtsCI	GGATG	6 cut(s)	58, 662, 1183, 1296, 1567, 1738
BtsIMutI	CAGTG	2 cut(s)	173, 1288
BveI	ACCTGC	1 cut(s)	1433
Cac8I	GCNNGC	9 cut(s)	203, 297, 315, 463, 931, 1440, 1491, 1635, 1857
CfoI	GCGC	2 cut(s)	45, 935
Cfr13I	GGNCC	5 cut(s)	395, 847, 1636, 1661, 1946
ClaI	ATCGAT	1 cut(s)	367
CsiI	ACCWGGT	1 cut(s)	1942
Csp6I	GTAC	4 cut(s)	522, 539, 1415, 1690
CviQI	GTAC	4 cut(s)	522, 539, 1415, 1690
DdeI	CTNAG	4 cut(s)	510, 1095, 1812, 1905
DpnI	GATC	9 cut(s)	36, 430, 840, 975, 1245, 1272, 1482, 1698, 1782
DpnII	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
DraI	TTTAAA	2 cut(s)	561, 892
DraIII	CACNNNGTG	1 cut(s)	179
DrdI	GACNNNNNNGTC	1 cut(s)	1382
DseDI	GACNNNNNNGTC	1 cut(s)	1382
EciI	GGCGGA	1 cut(s)	1537
Ecl136II	GAGCTC	1 cut(s)	278
Eco130I	CCWWGG	4 cut(s)	318, 850, 1078, 1531
Eco24I	GRGCYC	2 cut(s)	280, 1896
Eco31I	GGTCTC	3 cut(s)	1350, 1827, 1933
Eco32I	GATATC	1 cut(s)	1369
Eco47I	GGWCC	3 cut(s)	395, 847, 1946
Eco53kI	GAGCTC	1 cut(s)	278
Eco57I	CTGAAG	4 cut(s)	375, 456, 1505, 1914
EcoICRI	GAGCTC	1 cut(s)	278
EcoNI	CCTNNNNNAGG	1 cut(s)	1953
EcoO109I	RGGNCCY	4 cut(s)	395, 847, 1636, 1661
EcoRII	CCWGG	3 cut(s)	652, 1841, 1942
EcoRV	GATATC	1 cut(s)	1369
EcoT14I	CCWWGG	4 cut(s)	318, 850, 1078, 1531
EcoT22I	ATGCAT	3 cut(s)	1045, 1202, 1361
EcoT38I	GRGCYC	2 cut(s)	280, 1896
ErhI	CCWWGG	4 cut(s)	318, 850, 1078, 1531
FalI	AAGNNNNNCTT	6 cut(s)	567, 599, 854, 886, 1071, 1103
FaqI	GGGAC	1 cut(s)	1716
FauI	CCCGC	1 cut(s)	1651
FauNDI	CATATG	1 cut(s)	102
FbaI	TGATCA	1 cut(s)	1696
FblI	GTMKAC	3 cut(s)	153, 1225, 1605
Fnu4HI	GCNGC	4 cut(s)	293, 495, 927, 1566
FokI	GGATG	6 cut(s)	65, 669, 1170, 1303, 1574, 1725
FriOI	GRGCYC	2 cut(s)	280, 1896
Fsp4HI	GCNGC	4 cut(s)	293, 495, 927, 1566
FspBI	CTAG	5 cut(s)	527, 612, 851, 1725, 1776
GlaI	GCGC	2 cut(s)	44, 934
GluI	GCNGC	4 cut(s)	293, 495, 927, 1566
GsaI	CCCAGC	1 cut(s)	926
GsuI	CTGGAG	3 cut(s)	134, 1338, 2013
HaeII	RGCGCY	1 cut(s)	936
HaeIII	GGCC	2 cut(s)	1637, 1663
HapII	CCGG	1 cut(s)	1138
HhaI	GCGC	2 cut(s)	45, 935
Hin6I	GCGC	2 cut(s)	43, 933
HinP1I	GCGC	2 cut(s)	43, 933
HincII	GTYRAC	1 cut(s)	1233
HindII	GTYRAC	1 cut(s)	1233
HindIII	AAGCTT	1 cut(s)	868
HinfI	GANTC	7 cut(s)	118, 194, 214, 347, 580, 1322, 1514
HpaII	CCGG	1 cut(s)	1138
HphI	GGTGA	2 cut(s)	775, 1609
Hpy166II	GTNNAC	4 cut(s)	154, 1226, 1233, 1606
Hpy188I	TCNGA	9 cut(s)	475, 598, 838, 1096, 1485, 1815, 1884, 1908, 1977
Hpy8I	GTNNAC	4 cut(s)	154, 1226, 1233, 1606
HpyCH4III	ACNGT	6 cut(s)	420, 1038, 1230, 1283, 1468, 1474
HpyCH4IV	ACGT	1 cut(s)	709
HpyF10VI	GCNNNNNNNGC	4 cut(s)	103, 830, 932, 1552
HpyF3I	CTNAG	4 cut(s)	510, 1095, 1812, 1905
HpySE526I	ACGT	1 cut(s)	709
HspAI	GCGC	2 cut(s)	43, 933
Ksp22I	TGATCA	1 cut(s)	1696
Kzo9I	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
LmnI	GCTCC	3 cut(s)	223, 1930, 1994
Lsp1109I	GCAGC	2 cut(s)	481, 913
LweI	GCATC	6 cut(s)	488, 589, 1152, 1552, 1747, 1888
MabI	ACCWGGT	1 cut(s)	1942
MaeI	CTAG	5 cut(s)	527, 612, 851, 1725, 1776
MaeII	ACGT	1 cut(s)	709
MaeIII	GTNAC	2 cut(s)	1468, 1979
MalI	GATC	9 cut(s)	36, 430, 840, 975, 1245, 1272, 1482, 1698, 1782
MboI	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
MflI	RGATCY	1 cut(s)	1480
MhlI	GDGCHC	5 cut(s)	280, 884, 1857, 1896, 1999
MlyI	GAGTC	2 cut(s)	223, 1331
MmeI	TCCRAC	1 cut(s)	61
Mph1103I	ATGCAT	3 cut(s)	1045, 1202, 1361
MroXI	GAANNNNTTC	1 cut(s)	1540
MseI	TTAA	9 cut(s)	363, 560, 606, 639, 891, 965, 1257, 1353, 1584
MslI	CAYNNNNRTG	2 cut(s)	799, 1884
MspA1I	CMGCKG	4 cut(s)	292, 907, 926, 1799
MspI	CCGG	1 cut(s)	1138
MspR9I	CCNGG	4 cut(s)	654, 1138, 1843, 1944
Mva1269I	GAATGC	2 cut(s)	1719, 1786
MvaI	CCWGG	3 cut(s)	654, 1843, 1944
MwoI	GCNNNNNNNGC	4 cut(s)	103, 830, 932, 1552
NciI	CCSGG	1 cut(s)	1138
NdeI	CATATG	1 cut(s)	102
NdeII	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
NlaIV	GGNNCC	3 cut(s)	1526, 1537, 1662
NmuCI	GTSAC	1 cut(s)	1468
NsiI	ATGCAT	3 cut(s)	1045, 1202, 1361
PaqCI	CACCTGC	1 cut(s)	1433
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PctI	GAATGC	2 cut(s)	1719, 1786
PdmI	GAANNNNTTC	1 cut(s)	1540
PfeI	GAWTC	5 cut(s)	118, 194, 347, 580, 1514
PflFI	GACNNNGTC	1 cut(s)	1944
PkrI	GCNGC	4 cut(s)	294, 496, 928, 1567
PleI	GAGTC	2 cut(s)	222, 1330
PpsI	GAGTC	2 cut(s)	222, 1330
PpuMI	RGGWCCY	2 cut(s)	395, 847
PshAI	GACNNNNGTC	2 cut(s)	852, 1080
PsiI	TTATAA	1 cut(s)	1965
Psp124BI	GAGCTC	1 cut(s)	280
Psp5II	RGGWCCY	2 cut(s)	395, 847
Psp6I	CCWGG	3 cut(s)	652, 1841, 1942
PspFI	CCCAGC	1 cut(s)	922
PspGI	CCWGG	3 cut(s)	652, 1841, 1942
PspN4I	GGNNCC	3 cut(s)	1526, 1537, 1662
PspPI	GGNCC	5 cut(s)	395, 847, 1636, 1661, 1946
PspPPI	RGGWCCY	2 cut(s)	395, 847
PstI	CTGCAG	1 cut(s)	1444
PsuI	RGATCY	1 cut(s)	1480
PsyI	GACNNNGTC	1 cut(s)	1944
PvuII	CAGCTG	3 cut(s)	907, 926, 1799
RsaI	GTAC	4 cut(s)	523, 540, 1416, 1691
RsaNI	GTAC	4 cut(s)	522, 539, 1415, 1690
RseI	CAYNNNNRTG	2 cut(s)	799, 1884
SacI	GAGCTC	1 cut(s)	280
SaqAI	TTAA	9 cut(s)	363, 560, 606, 639, 891, 965, 1257, 1353, 1584
SatI	GCNGC	4 cut(s)	293, 495, 927, 1566
Sau3AI	GATC	9 cut(s)	34, 428, 838, 973, 1243, 1270, 1480, 1696, 1780
Sau96I	GGNCC	5 cut(s)	395, 847, 1636, 1661, 1946
SbfI	CCTGCAGG	1 cut(s)	1444
ScaI	AGTACT	1 cut(s)	523
SchI	GAGTC	2 cut(s)	223, 1331
ScrFI	CCNGG	4 cut(s)	654, 1138, 1843, 1944
SdaI	CCTGCAGG	1 cut(s)	1444
SduI	GDGCHC	5 cut(s)	280, 884, 1857, 1896, 1999
SexAI	ACCWGGT	1 cut(s)	1942
SfaNI	GCATC	6 cut(s)	488, 589, 1152, 1552, 1747, 1888
SfcI	CTRYAG	1 cut(s)	1440
SinI	GGWCC	3 cut(s)	395, 847, 1946
SmiMI	CAYNNNNRTG	2 cut(s)	799, 1884
SmlI	CTYRAG	5 cut(s)	38, 699, 842, 1743, 1953
SmoI	CTYRAG	5 cut(s)	38, 699, 842, 1743, 1953
SpeI	ACTAGT	1 cut(s)	1775
Sse8387I	CCTGCAGG	1 cut(s)	1444
SsiI	CCGC	6 cut(s)	4, 292, 1436, 1522, 1566, 1658
SspI	AATATT	3 cut(s)	10, 264, 1670
SspMI	CTAG	5 cut(s)	527, 612, 851, 1725, 1776
SstI	GAGCTC	1 cut(s)	280
StyD4I	CCNGG	4 cut(s)	652, 1136, 1841, 1942
StyI	CCWWGG	4 cut(s)	318, 850, 1078, 1531
TaaI	ACNGT	6 cut(s)	420, 1038, 1230, 1283, 1468, 1474
TaiI	ACGT	1 cut(s)	712
TaqI	TCGA	5 cut(s)	367, 1246, 1432, 1573, 1642
TaqII	GACCGA	1 cut(s)	1332
TatI	WGTACW	3 cut(s)	521, 538, 1414
TauI	GCSGC	2 cut(s)	295, 1568
TfiI	GAWTC	5 cut(s)	118, 194, 347, 580, 1514
Tru1I	TTAA	9 cut(s)	363, 560, 606, 639, 891, 965, 1257, 1353, 1584
Tru9I	TTAA	9 cut(s)	363, 560, 606, 639, 891, 965, 1257, 1353, 1584
TscAI	CASTG	2 cut(s)	180, 1288
TseFI	GTSAC	1 cut(s)	1468
TseI	GCWGC	2 cut(s)	494, 926
Tsp45I	GTSAC	1 cut(s)	1468
TspRI	CASTG	2 cut(s)	180, 1288
Tth111I	GACNNNGTC	1 cut(s)	1944
VpaK11BI	GGWCC	3 cut(s)	395, 847, 1946
XagI	CCTNNNNNAGG	1 cut(s)	1953
XapI	RAATTY	3 cut(s)	164, 208, 1762
XbaI	TCTAGA	2 cut(s)	526, 611
XmaJI	CCTAGG	1 cut(s)	850
XmiI	GTMKAC	3 cut(s)	153, 1225, 1605
XmnI	GAANNNNTTC	1 cut(s)	1540
XspI	CTAG	5 cut(s)	527, 612, 851, 1725, 1776
ZrmI	AGTACT	1 cut(s)	523
Zsp2I	ATGCAT	3 cut(s)	1045, 1202, 1361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.